Csor.00g115960 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g115960
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	beta-xylosidase 1
Location	Csor_Chr07: 714640 .. 715521 (+)
RNA-Seq Expression	Csor.00g115960
Synteny	Csor.00g115960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACAATCTTGGAAGAGCTGGATTGACATATTGGAGTCCAAATGTCAATGTTGTTCGAGATCCAAGATGGGGACGAACCCTGGAAACACCCGGCGAGGATCCTTTTGTGGTTGGCAAATATGCAGTGAACTATGTTAGAGGTCTCCAAGACGTGGAAGGAACTGAAAATGCCACCGATTTGAACTCTAGGCCTCTCAAGGTTTCTTCTTGTTGCAAGCACTATGCTGCTTATGATGTCGACAATTGGCTCGGGGTCGAACGCTACACTTTTGATGCTAAGGTTTATTAACGTTGATGTCTACACTTTTGATGCTACGCTCGCAAGGTTTCTCCTTAATGCCTTATTGTTTATTAACGTTGTGGATTAGGTGACCGAACAAGACATGTTGGAGACATTCCTTAAGCCATTTGAGATGTGTGTTAAGGAAGGAGATGTCAGCAGTGTGATGTGTTCTTACAACAAAGTTCATGGCCTTCCAACTTGTGCTGATCCGGCTCTCTTGAAGGACACCATTAGAGGCGATTGGGACCTTCATGGGTATAAATAAAATAAAATGAAATAAAAAATGATCAATCAAACCATATAAATATATATTTATTTATTTTTTTTCTTCAGATACATTGTTTCAGACTGCGACTCAATTGAGGTTATGGTTGATCATCAACATTTTCTGCAAGATACAAATGAAGATGCTGTTGCTCAAACTCTGAAAGCAGGCAAATTTATTTACTCTTTTTACAATTTCTTCTTTTGGGTAATGTTTTTTTTGTGTTGTTCTACAAAACCCATGAATCAATTTCGATTCTTTCATATGTAAATTTTCAGGGTTGGATTTGGATTGTGGTCAATTTTACCCAAATTTCACAGAAGACTCAGTAA

mRNA sequence

ATGTACAATCTTGGAAGAGCTGGATTGACATATTGGAGTCCAAATGTCAATGTTGTTCGAGATCCAAGATGGGGACGAACCCTGGAAACACCCGGCGAGGATCCTTTTGTGGTTGGCAAATATGCAGTGAACTATGTTAGAGGTCTCCAAGACGTGGAAGGAACTGAAAATGCCACCGATTTGAACTCTAGGCCTCTCAAGGTTTCTTCTTGTTGCAAGCACTATGCTGCTTATGATGTCGACAATTGGCTCGGGGTCGAACGCTACACTTTTGATGCTAAGGTGACCGAACAAGACATGTTGGAGACATTCCTTAAGCCATTTGAGATGTGTGTTAAGGAAGGAGATGTCAGCAGTGTGATGTGTTCTTACAACAAAGTTCATGGCCTTCCAACTTGTGCTGATCCGGCTCTCTTGAAGGACACCATTAGAGGCGATTGGGACCTTCATGGATACATTGTTTCAGACTGCGACTCAATTGAGGTTATGGTTGATCATCAACATTTTCTGCAAGATACAAATGAAGATGCTGTTGCTCAAACTCTGAAAGCAGGCAAATTTATTTACTCTTTTTACAATTTCTTCTTTTGGGGTTGGATTTGGATTGTGGTCAATTTTACCCAAATTTCACAGAAGACTCAGTAA

Coding sequence (CDS)

ATGTACAATCTTGGAAGAGCTGGATTGACATATTGGAGTCCAAATGTCAATGTTGTTCGAGATCCAAGATGGGGACGAACCCTGGAAACACCCGGCGAGGATCCTTTTGTGGTTGGCAAATATGCAGTGAACTATGTTAGAGGTCTCCAAGACGTGGAAGGAACTGAAAATGCCACCGATTTGAACTCTAGGCCTCTCAAGGTTTCTTCTTGTTGCAAGCACTATGCTGCTTATGATGTCGACAATTGGCTCGGGGTCGAACGCTACACTTTTGATGCTAAGGTGACCGAACAAGACATGTTGGAGACATTCCTTAAGCCATTTGAGATGTGTGTTAAGGAAGGAGATGTCAGCAGTGTGATGTGTTCTTACAACAAAGTTCATGGCCTTCCAACTTGTGCTGATCCGGCTCTCTTGAAGGACACCATTAGAGGCGATTGGGACCTTCATGGATACATTGTTTCAGACTGCGACTCAATTGAGGTTATGGTTGATCATCAACATTTTCTGCAAGATACAAATGAAGATGCTGTTGCTCAAACTCTGAAAGCAGGCAAATTTATTTACTCTTTTTACAATTTCTTCTTTTGGGGTTGGATTTGGATTGTGGTCAATTTTACCCAAATTTCACAGAAGACTCAGTAA

Protein sequence

MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATDLNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSVMCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQTLKAGKFIYSFYNFFFWGWIWIVVNFTQISQKTQ

Homology

[Close]

BLAST of Csor.00g115960 vs. ExPASy Swiss-Prot
Match: Q9LJN4 (Probable beta-D-xylosidase 5 OS=Arabidopsis thaliana OX=3702 GN=BXL5 PE=2 SV=2)

HSP 1 Score: 269.2 bits (687), Expect = 3.9e-71
Identity = 125/185 (67.57%), Postives = 146/185 (78.92%), Query Frame = 0


Query: 1   MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD 60
           M+N+G AGLTYWSPNVNV RDPRWGR  ETPGEDP VV KYAVNYV+GLQDV        
Sbjct: 141 MHNVGLAGLTYWSPNVNVFRDPRWGRGQETPGEDPLVVSKYAVNYVKGLQDVHDAG---- 200

Query: 61  LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV 120
             SR LKVSSCCKHY AYD+DNW G++R+ FDAKVT+QD+ +T+  PF+ CV+EGDVSSV
Sbjct: 201 -KSRRLKVSSCCKHYTAYDLDNWKGIDRFHFDAKVTKQDLEDTYQTPFKSCVEEGDVSSV 260

Query: 121 MCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ 180
           MCSYN+V+G+PTCADP LL+  IRG W L GYIVSDCDSI+V  +  H+ + T EDAVA 
Sbjct: 261 MCSYNRVNGIPTCADPNLLRGVIRGQWRLDGYIVSDCDSIQVYFNDIHYTK-TREDAVAL 319

Query: 181 TLKAG 186
            LKAG
Sbjct: 321 ALKAG 319

[Close]

BLAST of Csor.00g115960 vs. ExPASy Swiss-Prot
Match: A5JTQ2 (Beta-xylosidase/alpha-L-arabinofuranosidase 1 (Fragment) OS=Medicago sativa subsp. varia OX=36902 GN=Xyl1 PE=1 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 9.9e-67
Identity = 115/185 (62.16%), Postives = 143/185 (77.30%), Query Frame = 0


Query: 1   MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD 60
           MYN+G AGLTYWSPN+N+ RDPRWGR  ETPGEDP +  KYA  YV+GLQ  +      D
Sbjct: 154 MYNVGLAGLTYWSPNINIFRDPRWGRGQETPGEDPLLSSKYAAGYVKGLQQTD------D 213

Query: 61  LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV 120
            +S  LKV++CCKHY AYDVDNW GV+RYTFDA V++QD+ +TF  PF+ CV +G+V+SV
Sbjct: 214 GDSDKLKVAACCKHYTAYDVDNWKGVQRYTFDAVVSQQDLDDTFQPPFKSCVIDGNVASV 273

Query: 121 MCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ 180
           MCSYNKV+G PTCADP LLK  IRG W L+GYIVSDCDS+EV+   QH+ + T E+A A+
Sbjct: 274 MCSYNKVNGKPTCADPDLLKGVIRGKWKLNGYIVSDCDSVEVLYKDQHYTK-TPEEAAAK 331

Query: 181 TLKAG 186
           T+ +G
Sbjct: 334 TILSG 331

[Close]

BLAST of Csor.00g115960 vs. ExPASy Swiss-Prot
Match: Q94KD8 (Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.4e-65
Identity = 115/185 (62.16%), Postives = 144/185 (77.84%), Query Frame = 0


Query: 1   MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD 60
           MYN G  GLTYWSPNVN++RDPRWGR  ETPGEDP V GKYA +YVRGLQ   G + +  
Sbjct: 144 MYNGGVGGLTYWSPNVNILRDPRWGRGQETPGEDPVVAGKYAASYVRGLQ---GNDRSR- 203

Query: 61  LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV 120
                LKV++CCKH+ AYD+DNW GV+R+ F+AKV++QD+ +TF  PF MCVKEG+V+S+
Sbjct: 204 -----LKVAACCKHFTAYDLDNWNGVDRFHFNAKVSKQDIEDTFDVPFRMCVKEGNVASI 263

Query: 121 MCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ 180
           MCSYN+V+G+PTCADP LLK TIR  W L+GYIVSDCDS+ V+ D QH+   T E+A A 
Sbjct: 264 MCSYNQVNGVPTCADPNLLKKTIRNQWGLNGYIVSDCDSVGVLYDTQHY-TGTPEEAAAD 318

Query: 181 TLKAG 186
           ++KAG
Sbjct: 324 SIKAG 318

[Close]

BLAST of Csor.00g115960 vs. ExPASy Swiss-Prot
Match: Q9FLG1 (Beta-D-xylosidase 4 OS=Arabidopsis thaliana OX=3702 GN=BXL4 PE=1 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.9e-65
Identity = 112/185 (60.54%), Postives = 143/185 (77.30%), Query Frame = 0


Query: 1   MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD 60
           MYN+G AGLTYWSPNVN+ RDPRWGR  ETPGEDP +  KYA  YV+GLQ+ +G +    
Sbjct: 159 MYNVGLAGLTYWSPNVNIFRDPRWGRGQETPGEDPLLASKYASGYVKGLQETDGGD---- 218

Query: 61  LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV 120
             S  LKV++CCKHY AYDVDNW GVERY+F+A VT+QDM +T+  PF+ CV +G+V+SV
Sbjct: 219 --SNRLKVAACCKHYTAYDVDNWKGVERYSFNAVVTQQDMDDTYQPPFKSCVVDGNVASV 278

Query: 121 MCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ 180
           MCSYN+V+G PTCADP LL   IRG+W L+GYIVSDCDS++V+  +QH+ + T  +A A 
Sbjct: 279 MCSYNQVNGKPTCADPDLLSGVIRGEWKLNGYIVSDCDSVDVLYKNQHYTK-TPAEAAAI 336

Query: 181 TLKAG 186
           ++ AG
Sbjct: 339 SILAG 336

[Close]

BLAST of Csor.00g115960 vs. ExPASy Swiss-Prot
Match: A5JTQ3 (Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia OX=36902 GN=Xyl2 PE=2 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 7.1e-65
Identity = 110/185 (59.46%), Postives = 144/185 (77.84%), Query Frame = 0


Query: 1   MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD 60
           M+N+G AGLTYWSPN+N+ RDPRWGR  ETPGEDP +  KYA  YV+GLQ  +      D
Sbjct: 154 MHNVGLAGLTYWSPNINIFRDPRWGRGQETPGEDPLLASKYAAGYVKGLQQTD------D 213

Query: 61  LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV 120
            +S  LKV++CCKHY AYDVD+W GV+RYTF+A VT+QD+ +T+  PF+ CV +G+V+SV
Sbjct: 214 GDSNKLKVAACCKHYTAYDVDDWKGVQRYTFNAVVTQQDLDDTYQPPFKSCVIDGNVASV 273

Query: 121 MCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ 180
           MCSYN+V+G PTCADP LLK  IRG W L+GYIVSDCDS++V+  +QH+ + T E+A A+
Sbjct: 274 MCSYNQVNGKPTCADPDLLKGVIRGKWKLNGYIVSDCDSVDVLFKNQHYTK-TPEEAAAK 331

Query: 181 TLKAG 186
           ++ AG
Sbjct: 334 SILAG 331

[Close]

BLAST of Csor.00g115960 vs. NCBI nr
Match: KAG6594486.1 (putative beta-D-xylosidase 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 459 bits (1182), Expect = 1.24e-163
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD 60
           MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD
Sbjct: 1   MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD 60

Query: 61  LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV 120
           LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV
Sbjct: 61  LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV 120

Query: 121 MCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ 180
           MCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ
Sbjct: 121 MCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ 180

Query: 181 TLKAGKFIYSFYNFFFWGWIWIVVNFTQISQKTQ 214
           TLKAGKFIYSFYNFFFWGWIWIVVNFTQISQKTQ
Sbjct: 181 TLKAGKFIYSFYNFFFWGWIWIVVNFTQISQKTQ 214

[Close]

BLAST of Csor.00g115960 vs. NCBI nr
Match: KAG6594482.1 (putative beta-D-xylosidase 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 395 bits (1014), Expect = 3.82e-136
Identity = 184/185 (99.46%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 1   MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD 60
           MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD
Sbjct: 125 MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD 184

Query: 61  LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV 120
           LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV
Sbjct: 185 LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV 244

Query: 121 MCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ 180
           MCSYNKVHGLPTCADP LLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ
Sbjct: 245 MCSYNKVHGLPTCADPVLLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ 304

Query: 181 TLKAG 185
           TLKAG
Sbjct: 305 TLKAG 309

[Close]

BLAST of Csor.00g115960 vs. NCBI nr
Match: XP_023517807.1 (probable beta-D-xylosidase 5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 396 bits (1018), Expect = 4.94e-131
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD 60
           MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD
Sbjct: 125 MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD 184

Query: 61  LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV 120
           LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV
Sbjct: 185 LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV 244

Query: 121 MCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ 180
           MCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ
Sbjct: 245 MCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ 304

Query: 181 TLKAG 185
           TLKAG
Sbjct: 305 TLKAG 309

[Close]

BLAST of Csor.00g115960 vs. NCBI nr
Match: XP_023518170.1 (beta-xylosidase/alpha-L-arabinofuranosidase 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 396 bits (1018), Expect = 1.23e-130
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD 60
           MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD
Sbjct: 160 MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD 219

Query: 61  LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV 120
           LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV
Sbjct: 220 LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV 279

Query: 121 MCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ 180
           MCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ
Sbjct: 280 MCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ 339

Query: 181 TLKAG 185
           TLKAG
Sbjct: 340 TLKAG 344

[Close]

BLAST of Csor.00g115960 vs. NCBI nr
Match: XP_022926358.1 (beta-xylosidase/alpha-L-arabinofuranosidase 2-like [Cucurbita moschata])

HSP 1 Score: 396 bits (1018), Expect = 1.26e-130
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD 60
           MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD
Sbjct: 161 MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD 220

Query: 61  LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV 120
           LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV
Sbjct: 221 LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV 280

Query: 121 MCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ 180
           MCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ
Sbjct: 281 MCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ 340

Query: 181 TLKAG 185
           TLKAG
Sbjct: 341 TLKAG 345

[Close]

BLAST of Csor.00g115960 vs. ExPASy TrEMBL
Match: A0A6J1EHU1 (beta-xylosidase/alpha-L-arabinofuranosidase 2-like OS=Cucurbita moschata OX=3662 GN=LOC111433529 PE=3 SV=1)

HSP 1 Score: 396 bits (1018), Expect = 6.12e-131
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD 60
           MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD
Sbjct: 161 MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD 220

Query: 61  LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV 120
           LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV
Sbjct: 221 LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV 280

Query: 121 MCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ 180
           MCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ
Sbjct: 281 MCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ 340

Query: 181 TLKAG 185
           TLKAG
Sbjct: 341 TLKAG 345

[Close]

BLAST of Csor.00g115960 vs. ExPASy TrEMBL
Match: A0A6J1KSV9 (probable beta-D-xylosidase 5 OS=Cucurbita maxima OX=3661 GN=LOC111496935 PE=3 SV=1)

HSP 1 Score: 391 bits (1005), Expect = 6.94e-130
Identity = 183/185 (98.92%), Postives = 183/185 (98.92%), Query Frame = 0


Query: 1   MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD 60
           MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD
Sbjct: 83  MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD 142

Query: 61  LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV 120
           LN RPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV
Sbjct: 143 LNFRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV 202

Query: 121 MCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ 180
           MCSYNKVHGLPTCADPALLKDTIRGDW LHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ
Sbjct: 203 MCSYNKVHGLPTCADPALLKDTIRGDWGLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ 262

Query: 181 TLKAG 185
           TLKAG
Sbjct: 263 TLKAG 267

[Close]

BLAST of Csor.00g115960 vs. ExPASy TrEMBL
Match: A0A6J1KM02 (probable beta-D-xylosidase 5 OS=Cucurbita maxima OX=3661 GN=LOC111496934 PE=3 SV=1)

HSP 1 Score: 389 bits (1000), Expect = 3.91e-129
Identity = 182/185 (98.38%), Postives = 182/185 (98.38%), Query Frame = 0


Query: 1   MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD 60
           MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENA D
Sbjct: 83  MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENAAD 142

Query: 61  LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV 120
           LN RPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV
Sbjct: 143 LNFRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV 202

Query: 121 MCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ 180
           MCSYNKVHGLPTCADPALLKDTIRGDW LHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ
Sbjct: 203 MCSYNKVHGLPTCADPALLKDTIRGDWGLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ 262

Query: 181 TLKAG 185
           TLKAG
Sbjct: 263 TLKAG 267

[Close]

BLAST of Csor.00g115960 vs. ExPASy TrEMBL
Match: A0A6J1EFD8 (beta-xylosidase/alpha-L-arabinofuranosidase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111433806 PE=3 SV=1)

HSP 1 Score: 367 bits (941), Expect = 2.70e-120
Identity = 168/185 (90.81%), Postives = 176/185 (95.14%), Query Frame = 0


Query: 1   MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD 60
           MYNLGRAGLTYWSP +NVVRDPRWGRTLETPGEDPFVVGKYA NYVRGLQDVEGTENATD
Sbjct: 83  MYNLGRAGLTYWSPTINVVRDPRWGRTLETPGEDPFVVGKYAANYVRGLQDVEGTENATD 142

Query: 61  LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV 120
           LNSRPLKVSSCCKH+AAYDVDNW GV RYTFDA+VTEQDMLETFLKPFEMCVKEG VSSV
Sbjct: 143 LNSRPLKVSSCCKHFAAYDVDNWKGVHRYTFDARVTEQDMLETFLKPFEMCVKEGGVSSV 202

Query: 121 MCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ 180
           MCSYN+V+G PTCADP LLKDTIRGDWDLHGYIV+DCDS+EVMV +QHFL DTNEDAVAQ
Sbjct: 203 MCSYNRVNGYPTCADPVLLKDTIRGDWDLHGYIVADCDSVEVMVKYQHFLNDTNEDAVAQ 262

Query: 181 TLKAG 185
           TLKAG
Sbjct: 263 TLKAG 267

[Close]

BLAST of Csor.00g115960 vs. ExPASy TrEMBL
Match: A0A6J1EHS7 (probable beta-D-xylosidase 5 OS=Cucurbita moschata OX=3662 GN=LOC111433522 PE=3 SV=1)

HSP 1 Score: 364 bits (934), Expect = 3.03e-119
Identity = 166/185 (89.73%), Postives = 176/185 (95.14%), Query Frame = 0


Query: 1   MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD 60
           M+NLGRAGLT+WSP +NVVRDPRWGR LETPGEDPFVVGKYAVNYVRGLQDVEGTENATD
Sbjct: 83  MFNLGRAGLTFWSPTINVVRDPRWGRILETPGEDPFVVGKYAVNYVRGLQDVEGTENATD 142

Query: 61  LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV 120
           LNSRPLKVSSCCKH+A YDVDNW GV RYTFDA+VTEQDMLETFLKPFEMCVKEGDVSSV
Sbjct: 143 LNSRPLKVSSCCKHFAGYDVDNWKGVHRYTFDARVTEQDMLETFLKPFEMCVKEGDVSSV 202

Query: 121 MCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ 180
           MCSYN+V+G PTCADP LLKDTIRGDWDLHGYIV+DCDS+EVMV +QHFL DTNEDAVAQ
Sbjct: 203 MCSYNRVNGYPTCADPVLLKDTIRGDWDLHGYIVADCDSVEVMVKYQHFLNDTNEDAVAQ 262

Query: 181 TLKAG 185
           TLKAG
Sbjct: 263 TLKAG 267

[Close]

BLAST of Csor.00g115960 vs. TAIR 10
Match: AT3G19620.1 (Glycosyl hydrolase family protein )

HSP 1 Score: 269.2 bits (687), Expect = 2.8e-72
Identity = 125/185 (67.57%), Postives = 146/185 (78.92%), Query Frame = 0


Query: 1   MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD 60
           M+N+G AGLTYWSPNVNV RDPRWGR  ETPGEDP VV KYAVNYV+GLQDV        
Sbjct: 141 MHNVGLAGLTYWSPNVNVFRDPRWGRGQETPGEDPLVVSKYAVNYVKGLQDVHDAG---- 200

Query: 61  LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV 120
             SR LKVSSCCKHY AYD+DNW G++R+ FDAKVT+QD+ +T+  PF+ CV+EGDVSSV
Sbjct: 201 -KSRRLKVSSCCKHYTAYDLDNWKGIDRFHFDAKVTKQDLEDTYQTPFKSCVEEGDVSSV 260

Query: 121 MCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ 180
           MCSYN+V+G+PTCADP LL+  IRG W L GYIVSDCDSI+V  +  H+ + T EDAVA 
Sbjct: 261 MCSYNRVNGIPTCADPNLLRGVIRGQWRLDGYIVSDCDSIQVYFNDIHYTK-TREDAVAL 319

Query: 181 TLKAG 186
            LKAG
Sbjct: 321 ALKAG 319

[Close]

BLAST of Csor.00g115960 vs. TAIR 10
Match: AT1G02640.1 (beta-xylosidase 2 )

HSP 1 Score: 250.8 bits (639), Expect = 1.0e-66
Identity = 115/185 (62.16%), Postives = 144/185 (77.84%), Query Frame = 0


Query: 1   MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD 60
           MYN G  GLTYWSPNVN++RDPRWGR  ETPGEDP V GKYA +YVRGLQ   G + +  
Sbjct: 144 MYNGGVGGLTYWSPNVNILRDPRWGRGQETPGEDPVVAGKYAASYVRGLQ---GNDRSR- 203

Query: 61  LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV 120
                LKV++CCKH+ AYD+DNW GV+R+ F+AKV++QD+ +TF  PF MCVKEG+V+S+
Sbjct: 204 -----LKVAACCKHFTAYDLDNWNGVDRFHFNAKVSKQDIEDTFDVPFRMCVKEGNVASI 263

Query: 121 MCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ 180
           MCSYN+V+G+PTCADP LLK TIR  W L+GYIVSDCDS+ V+ D QH+   T E+A A 
Sbjct: 264 MCSYNQVNGVPTCADPNLLKKTIRNQWGLNGYIVSDCDSVGVLYDTQHY-TGTPEEAAAD 318

Query: 181 TLKAG 186
           ++KAG
Sbjct: 324 SIKAG 318

[Close]

BLAST of Csor.00g115960 vs. TAIR 10
Match: AT5G64570.1 (beta-D-xylosidase 4 )

HSP 1 Score: 250.4 bits (638), Expect = 1.3e-66
Identity = 112/185 (60.54%), Postives = 143/185 (77.30%), Query Frame = 0


Query: 1   MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD 60
           MYN+G AGLTYWSPNVN+ RDPRWGR  ETPGEDP +  KYA  YV+GLQ+ +G +    
Sbjct: 159 MYNVGLAGLTYWSPNVNIFRDPRWGRGQETPGEDPLLASKYASGYVKGLQETDGGD---- 218

Query: 61  LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV 120
             S  LKV++CCKHY AYDVDNW GVERY+F+A VT+QDM +T+  PF+ CV +G+V+SV
Sbjct: 219 --SNRLKVAACCKHYTAYDVDNWKGVERYSFNAVVTQQDMDDTYQPPFKSCVVDGNVASV 278

Query: 121 MCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ 180
           MCSYN+V+G PTCADP LL   IRG+W L+GYIVSDCDS++V+  +QH+ + T  +A A 
Sbjct: 279 MCSYNQVNGKPTCADPDLLSGVIRGEWKLNGYIVSDCDSVDVLYKNQHYTK-TPAEAAAI 336

Query: 181 TLKAG 186
           ++ AG
Sbjct: 339 SILAG 336

[Close]

BLAST of Csor.00g115960 vs. TAIR 10
Match: AT5G49360.1 (beta-xylosidase 1 )

HSP 1 Score: 247.7 bits (631), Expect = 8.6e-66
Identity = 115/185 (62.16%), Postives = 143/185 (77.30%), Query Frame = 0


Query: 1   MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD 60
           MYN G AGLTYWSPNVN++RDPRWGR  ETPGEDP V  KYA +YVRGLQ        T 
Sbjct: 149 MYNGGVAGLTYWSPNVNILRDPRWGRGQETPGEDPIVAAKYAASYVRGLQ-------GTA 208

Query: 61  LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV 120
             +R LKV++CCKHY AYD+DNW GV+R+ F+AKVT+QD+ +T+  PF+ CV EG V+SV
Sbjct: 209 AGNR-LKVAACCKHYTAYDLDNWNGVDRFHFNAKVTQQDLEDTYNVPFKSCVYEGKVASV 268

Query: 121 MCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ 180
           MCSYN+V+G PTCAD  LLK+TIRG W L+GYIVSDCDS++V  + QH+   T E+A A+
Sbjct: 269 MCSYNQVNGKPTCADENLLKNTIRGQWRLNGYIVSDCDSVDVFFNQQHY-TSTPEEAAAR 324

Query: 181 TLKAG 186
           ++KAG
Sbjct: 329 SIKAG 324

[Close]

BLAST of Csor.00g115960 vs. TAIR 10
Match: AT5G09730.1 (beta-xylosidase 3 )

HSP 1 Score: 244.2 bits (622), Expect = 9.5e-65
Identity = 110/185 (59.46%), Postives = 139/185 (75.14%), Query Frame = 0


Query: 1   MYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTENATD 60
           MYN+G AGLT+WSPNVN+ RDPRWGR  ETPGEDP +  KYAV YV+GLQ+ +G +    
Sbjct: 149 MYNVGSAGLTFWSPNVNIFRDPRWGRGQETPGEDPTLSSKYAVAYVKGLQETDGGD---- 208

Query: 61  LNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGDVSSV 120
                LKV++CCKHY AYD+DNW  V R TF+A V +QD+ +TF  PF+ CV +G V+SV
Sbjct: 209 --PNRLKVAACCKHYTAYDIDNWRNVNRLTFNAVVNQQDLADTFQPPFKSCVVDGHVASV 268

Query: 121 MCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNEDAVAQ 180
           MCSYN+V+G PTCADP LL   IRG W L+GYIVSDCDS++V+   QH+ + T E+AVA+
Sbjct: 269 MCSYNQVNGKPTCADPDLLSGVIRGQWQLNGYIVSDCDSVDVLFRKQHYAK-TPEEAVAK 326

Query: 181 TLKAG 186
           +L AG
Sbjct: 329 SLLAG 326

The following BLAST results are available for this feature:

BLAST of Csor.00g115960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LJN4	3.9e-71	67.57	Probable beta-D-xylosidase 5 OS=Arabidopsis thaliana OX=3702 GN=BXL5 PE=2 SV=2	[more]
A5JTQ2	9.9e-67	62.16	Beta-xylosidase/alpha-L-arabinofuranosidase 1 (Fragment) OS=Medicago sativa subs...	[more]
Q94KD8	1.4e-65	62.16	Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1	[more]
Q9FLG1	1.9e-65	60.54	Beta-D-xylosidase 4 OS=Arabidopsis thaliana OX=3702 GN=BXL4 PE=1 SV=1	[more]
A5JTQ3	7.1e-65	59.46	Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia OX...	[more]

BLAST of Csor.00g115960 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6594486.1	1.24e-163	100.00	putative beta-D-xylosidase 5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6594482.1	3.82e-136	99.46	putative beta-D-xylosidase 5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023517807.1	4.94e-131	100.00	probable beta-D-xylosidase 5 [Cucurbita pepo subsp. pepo]	[more]
XP_023518170.1	1.23e-130	100.00	beta-xylosidase/alpha-L-arabinofuranosidase 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022926358.1	1.26e-130	100.00	beta-xylosidase/alpha-L-arabinofuranosidase 2-like [Cucurbita moschata]	[more]

BLAST of Csor.00g115960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EHU1	6.12e-131	100.00	beta-xylosidase/alpha-L-arabinofuranosidase 2-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1KSV9	6.94e-130	98.92	probable beta-D-xylosidase 5 OS=Cucurbita maxima OX=3661 GN=LOC111496935 PE=3 SV...	[more]
A0A6J1KM02	3.91e-129	98.38	probable beta-D-xylosidase 5 OS=Cucurbita maxima OX=3661 GN=LOC111496934 PE=3 SV...	[more]
A0A6J1EFD8	2.70e-120	90.81	beta-xylosidase/alpha-L-arabinofuranosidase 1-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1EHS7	3.03e-119	89.73	probable beta-D-xylosidase 5 OS=Cucurbita moschata OX=3662 GN=LOC111433522 PE=3 ...	[more]

BLAST of Csor.00g115960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19620.1	2.8e-72	67.57	Glycosyl hydrolase family protein	[more]
AT1G02640.1	1.0e-66	62.16	beta-xylosidase 2	[more]
AT5G64570.1	1.3e-66	60.54	beta-D-xylosidase 4	[more]
AT5G49360.1	8.6e-66	62.16	beta-xylosidase 1	[more]
AT5G09730.1	9.5e-65	59.46	beta-xylosidase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001764	Glycoside hydrolase, family 3, N-terminal	PRINTS	PR00133	GLHYDRLASE3	coord: 23..39 score: 44.96 coord: 68..84 score: 25.77 coord: 142..160 score: 25.06
IPR001764	Glycoside hydrolase, family 3, N-terminal	PFAM	PF00933	Glyco_hydro_3	coord: 11..185 e-value: 7.4E-31 score: 107.8
IPR036962	Glycoside hydrolase, family 3, N-terminal domain superfamily	GENE3D	3.20.20.300		coord: 3..195 e-value: 7.5E-56 score: 191.6
IPR044993	Beta-D-xylosidase	PANTHER	PTHR42721	SUGAR HYDROLASE-RELATED	coord: 1..186
None	No IPR available	PANTHER	PTHR42721:SF25	QUALITY PROTEIN: PROBABLE BETA-D-XYLOSIDASE 2-RELATED	coord: 1..186
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 9..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g115960.m01	Csor.00g115960.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045493	xylan catabolic process
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0009044	xylan 1,4-beta-xylosidase activity
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds