Csor.00g115790 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g115790
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr07: 794387 .. 795247 (-)
RNA-Seq ExpressionCsor.00g115790
SyntenyCsor.00g115790
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACACGAATCGAATCGAGAATCCGTGCACGCGGCCGCAGAACACGAGCAAGAACAAGAAAATCCGCAAGAAGATATGAACAATGTGGAGAATGAACAAAATGATCCCGGAGAAATCGTACAAAACGAGGAAGTGAGATCGACAACAGAGAACCAAGTAATCGCAGTACAAACGCTATACAATTTCAAGAAAAAACATTTGAAGACAATACTCCAATTATGGAATCGTTCACACCTTAAAGAGTTGGAAGATCCAAAGATGAAGGAAGTCGAAAGGAGAAAGAAAGAAGGGCGTTTAATAATAAAGGACGTGGAAGACGACGGAAGCTTCGACAGGAAGAAGCAGAAAAAGGAAAACAAGAATTTGTTCAATGAATTCAGCACTTCAAGAAAAGGAAAAGAGAAAATACACGAACCTGAAATAATTTTCGATCCTCTGGTATTGCTCCGCTGCATTACATTGGGATTCTCTGTATACATTGGGCATCTGATGGAGATGGCGATAGAGAGGCGTCGAGGTGCACCGAATTGGATATCTCAACTGGAAGAAGGCGCGGATCTGTTGGATGGCGTAATACGGAAGGTGCAGATAATGAACGACGAAATGCGACGGATAAGGAGGAGGAAGGATCTGAGGGAGGAATATGTGAAATTTCATACAATTTTGACTCAACTGGATGAGATTGACCAACATATGGAAGCCTCTCCAAACATCGGGATTGTTTCTGAGAAGGATTGTACGGATTTAGAATTGCGGGTGTGTGAGCATGAGCTGAAATGCTGCAAGAACGGCGCGGATGAGTTAGTGTCCGAAGTGTTAAAACTTATGAAGGAATCAAAGGAACATTATATTTTGTAA

mRNA sequence

ATGGCACACGAATCGAATCGAGAATCCGTGCACGCGGCCGCAGAACACGAGCAAGAACAAGAAAATCCGCAAGAAGATATGAACAATGTGGAGAATGAACAAAATGATCCCGGAGAAATCGTACAAAACGAGGAAGTGAGATCGACAACAGAGAACCAAGTAATCGCAGTACAAACGCTATACAATTTCAAGAAAAAACATTTGAAGACAATACTCCAATTATGGAATCGTTCACACCTTAAAGAGTTGGAAGATCCAAAGATGAAGGAAGTCGAAAGGAGAAAGAAAGAAGGGCGTTTAATAATAAAGGACGTGGAAGACGACGGAAGCTTCGACAGGAAGAAGCAGAAAAAGGAAAACAAGAATTTGTTCAATGAATTCAGCACTTCAAGAAAAGGAAAAGAGAAAATACACGAACCTGAAATAATTTTCGATCCTCTGGTATTGCTCCGCTGCATTACATTGGGATTCTCTGTATACATTGGGCATCTGATGGAGATGGCGATAGAGAGGCGTCGAGGTGCACCGAATTGGATATCTCAACTGGAAGAAGGCGCGGATCTGTTGGATGGCGTAATACGGAAGGTGCAGATAATGAACGACGAAATGCGACGGATAAGGAGGAGGAAGGATCTGAGGGAGGAATATGTGAAATTTCATACAATTTTGACTCAACTGGATGAGATTGACCAACATATGGAAGCCTCTCCAAACATCGGGATTGTTTCTGAGAAGGATTGTACGGATTTAGAATTGCGGGTGTGTGAGCATGAGCTGAAATGCTGCAAGAACGGCGCGGATGAGTTAGTGTCCGAAGTGTTAAAACTTATGAAGGAATCAAAGGAACATTATATTTTGTAA

Coding sequence (CDS)

ATGGCACACGAATCGAATCGAGAATCCGTGCACGCGGCCGCAGAACACGAGCAAGAACAAGAAAATCCGCAAGAAGATATGAACAATGTGGAGAATGAACAAAATGATCCCGGAGAAATCGTACAAAACGAGGAAGTGAGATCGACAACAGAGAACCAAGTAATCGCAGTACAAACGCTATACAATTTCAAGAAAAAACATTTGAAGACAATACTCCAATTATGGAATCGTTCACACCTTAAAGAGTTGGAAGATCCAAAGATGAAGGAAGTCGAAAGGAGAAAGAAAGAAGGGCGTTTAATAATAAAGGACGTGGAAGACGACGGAAGCTTCGACAGGAAGAAGCAGAAAAAGGAAAACAAGAATTTGTTCAATGAATTCAGCACTTCAAGAAAAGGAAAAGAGAAAATACACGAACCTGAAATAATTTTCGATCCTCTGGTATTGCTCCGCTGCATTACATTGGGATTCTCTGTATACATTGGGCATCTGATGGAGATGGCGATAGAGAGGCGTCGAGGTGCACCGAATTGGATATCTCAACTGGAAGAAGGCGCGGATCTGTTGGATGGCGTAATACGGAAGGTGCAGATAATGAACGACGAAATGCGACGGATAAGGAGGAGGAAGGATCTGAGGGAGGAATATGTGAAATTTCATACAATTTTGACTCAACTGGATGAGATTGACCAACATATGGAAGCCTCTCCAAACATCGGGATTGTTTCTGAGAAGGATTGTACGGATTTAGAATTGCGGGTGTGTGAGCATGAGCTGAAATGCTGCAAGAACGGCGCGGATGAGTTAGTGTCCGAAGTGTTAAAACTTATGAAGGAATCAAAGGAACATTATATTTTGTAA

Protein sequence

MAHESNRESVHAAAEHEQEQENPQEDMNNVENEQNDPGEIVQNEEVRSTTENQVIAVQTLYNFKKKHLKTILQLWNRSHLKELEDPKMKEVERRKKEGRLIIKDVEDDGSFDRKKQKKENKNLFNEFSTSRKGKEKIHEPEIIFDPLVLLRCITLGFSVYIGHLMEMAIERRRGAPNWISQLEEGADLLDGVIRKVQIMNDEMRRIRRRKDLREEYVKFHTILTQLDEIDQHMEASPNIGIVSEKDCTDLELRVCEHELKCCKNGADELVSEVLKLMKESKEHYIL
Homology
BLAST of Csor.00g115790 vs. NCBI nr
Match: KAG6594503.1 (hypothetical protein SDJN03_11056, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 550 bits (1416), Expect = 6.83e-197
Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0

Query: 1   MAHESNRESVHAAAEHEQEQENPQEDMNNVENEQNDPGEIVQNEEVRSTTENQVIAVQTL 60
           MAHESNRESVHAAAEHEQEQENPQEDMNNVENEQNDPGEIVQNEEVRSTTENQVIAVQTL
Sbjct: 1   MAHESNRESVHAAAEHEQEQENPQEDMNNVENEQNDPGEIVQNEEVRSTTENQVIAVQTL 60

Query: 61  YNFKKKHLKTILQLWNRSHLKELEDPKMKEVERRKKEGRLIIKDVEDDGSFDRKKQKKEN 120
           YNFKKKHLKTILQLWNRSHLKELEDPKMKEVERRKKEGRLIIKDVEDDGSFDRKKQKKEN
Sbjct: 61  YNFKKKHLKTILQLWNRSHLKELEDPKMKEVERRKKEGRLIIKDVEDDGSFDRKKQKKEN 120

Query: 121 KNLFNEFSTSRKGKEKIHEPEIIFDPLVLLRCITLGFSVYIGHLMEMAIERRRGAPNWIS 180
           KNLFNEFSTSRKGKEKIHEPEIIFDPLVLLRCITLGFSVYIGHLMEMAIERRRGAPNWIS
Sbjct: 121 KNLFNEFSTSRKGKEKIHEPEIIFDPLVLLRCITLGFSVYIGHLMEMAIERRRGAPNWIS 180

Query: 181 QLEEGADLLDGVIRKVQIMNDEMRRIRRRKDLREEYVKFHTILTQLDEIDQHMEASPNIG 240
           QLEEGADLLDGVIRKVQIMNDEMRRIRRRKDLREEYVKFHTILTQLDEIDQHMEASPNIG
Sbjct: 181 QLEEGADLLDGVIRKVQIMNDEMRRIRRRKDLREEYVKFHTILTQLDEIDQHMEASPNIG 240

Query: 241 IVSEKDCTDLELRVCEHELKCCKNGADELVSEVLKLMKESKEHYIL 286
           IVSEKDCTDLELRVCEHELKCCKNGADELVSEVLKLMKESKEHYIL
Sbjct: 241 IVSEKDCTDLELRVCEHELKCCKNGADELVSEVLKLMKESKEHYIL 286

BLAST of Csor.00g115790 vs. NCBI nr
Match: KAG6594502.1 (hypothetical protein SDJN03_11055, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 56.2 bits (134), Expect = 5.11e-05
Identity = 39/146 (26.71%), Postives = 65/146 (44.52%), Query Frame = 0

Query: 135 EKIHEPEIIFDPLVLLRCITLGFSVYIGHLMEMAIERRRGAPNWISQLEEGADLLDGVIR 194
           E +   E + +PL L+  I   +S YI H++ MA  R      W     E   L +  ++
Sbjct: 144 EAVKSGEKMAEPLTLMEEIVSVYSKYIDHILLMARNRFNDENRWNFGRNECGGLAEIFLK 203

Query: 195 KVQIMNDEMRRIRRRKDLREEYV----KFHTILTQLDEIDQHMEASPNIGIVSEKDCTDL 254
            +Q +  E+ R++      + Y     +   I+ QL+ + +  + SPNI   ++ +CT  
Sbjct: 204 NIQSLGSELARMKNDLSQMKNYFIIAPRIRQIMNQLETMHESFDRSPNITASAKPNCTKQ 263

Query: 255 ELRVCEHELKCCKNGADELVSEVLKL 276
           EL  C  EL   K    E+ S V  L
Sbjct: 264 ELIACMEELNQFKKQLYEISSGVCGL 289

BLAST of Csor.00g115790 vs. NCBI nr
Match: KGN49359.1 (hypothetical protein Csa_002997 [Cucumis sativus])

HSP 1 Score: 55.5 bits (132), Expect = 8.40e-05
Identity = 40/153 (26.14%), Postives = 82/153 (53.59%), Query Frame = 0

Query: 138 HEPEIIFDPLVLLRCITLGFSVYIGHLMEMAIERRRGAP----NWISQLEEGADLLDGVI 197
           ++PE+  DPL +L  I L +  +I  + +M  + ++        W   L++G  +++ + 
Sbjct: 98  NQPELGIDPLEVLEEIVLKYHDFINEIYQMLKDEQKKVKIQWQKWRYILDKGNLIVEDLT 157

Query: 198 RKVQIMNDEMRRIRRRKDLREEYV--KFHT--ILTQLDEIDQHMEASPNIGIVSEKDCTD 257
           R ++ +  EM  ++   +L  EY   K H   +L  L +I++ +E+SPN  +VS+    D
Sbjct: 158 RSLKTVEIEMEWMKSIDELHREYSIRKTHVPDLLALLRDINERIESSPNFKVVSDMKKRD 217

Query: 258 LELRVCEHELKCCKNGADELVSEVLKLMKESKE 282
             L++C  EL+     + E ++E+ ++++E KE
Sbjct: 218 EVLKMCLDELET----SQEELAEMFEVIQELKE 246

BLAST of Csor.00g115790 vs. NCBI nr
Match: XP_023518166.1 (uncharacterized protein LOC111781710 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 53.9 bits (128), Expect = 4.51e-04
Identity = 34/129 (26.36%), Postives = 60/129 (46.51%), Query Frame = 0

Query: 135 EKIHEPEIIFDPLVLLRCITLGFSVYIGHLMEMAIERRRGAPNWISQLEEGADLLDGVIR 194
           E +   E + +PL L+  I   +S YI H++ MA  R +    W     E   L +  ++
Sbjct: 144 EAVKLEEKMAEPLKLMEEIVSVYSKYIDHILLMARNRFKDEDKWNFGRNECGGLAEIFLK 203

Query: 195 KVQIMNDEMRRIRRRKDLREEYV----KFHTILTQLDEIDQHMEASPNIGIVSEKDCTDL 254
            +Q +  E+ R++      + Y     +   I+ QL+ + +  + SPNI   ++ +CT  
Sbjct: 204 NIQTLGSELVRMKNDLSQMKNYFIIAPRIRQIMNQLETMHESFDRSPNISASAKPNCTKQ 263

Query: 255 ELRVCEHEL 259
           EL  C  EL
Sbjct: 264 ELIACMEEL 272

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6594503.16.83e-197100.00hypothetical protein SDJN03_11056, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6594502.15.11e-0526.71hypothetical protein SDJN03_11055, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN49359.18.40e-0526.14hypothetical protein Csa_002997 [Cucumis sativus][more]
XP_023518166.14.51e-0426.36uncharacterized protein LOC111781710 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 88..108
NoneNo IPR availableCOILSCoilCoilcoord: 13..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g115790.m01Csor.00g115790.m01mRNA