Csor.00g115470 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g115470
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RAB GTPase homolog A1C
Location	Csor_Chr07: 905729 .. 907924 (+)
RNA-Seq Expression	Csor.00g115470
Synteny	Csor.00g115470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGCGTACAGAGCTGAAGACGACTATGACTATCTCTTTAAGGTCGTCTTAATCGGCGATTCTGGCGTTGGCAAGTCCAATTTGCTTTCCCGCTTTACCAAAAACGAGTTCAGCCTCGAAACTAAGTCCACTATTGGCGTTGAGTTTGCTACCCGCAGTTTGAGTATTGATGGCAGGGTTATCAAGGCTCAGATTTGGGACACCGCTGGCCAAGAACGGTGATTTCTCTTTTCTCTCTGTTTATTTTAATTTCATGATCTGGGTCCTTGTCTTTTTTGGTGGAAATGTTGTGTCACATATGGGGCTCTCCTATGTTTTATTGTTTTTCTTTGTGCTTCTGTTGATTTCGAGATGTACTGCCTTCAAATTTAATTGATTCTTTAGCTTTGATTACTGCTAATTAATGTATTTGCTTGGTTTAGATCATGTTTGTTCATTTGTTTATTAGGTTCCATATTTTAGGTGTTGATTGTAATGGGGTACCAAACGGGTTTGGTGGATCTAAACTCAAAGACATTTCTTAGAACTTCGATTACTTTTATCTGCCGGATGTTGCCTTCCCTTGTCATGTTTATCCCCATCAAAACCTCAATTCACCATATGGTTTGTGTTCTGTGTTGTTGTCCAATTTGCATCACTAGTTGACCCCCAAATGAACGACATCCTATCCTGCTGGATGCTACCTTCTCCATAAAACAGCACACAGAAAGGACCAATAGAGATAGCAAATCAAGCCTTCCTGCCGTATTTCAATATGGAAAGCTTTTTGGTTTGGTTATGCATATGCTTGAAACATGTCTTTATGGCTTAAACCAGGAGCCCCCTTCCCTTCAATTGTTACTCAGACATCTTATGTCTACCGATACGAATTGCACATTCAAATGCACCTAAAGTCCGTGAGTATGTTAGAAGACCAATCAGCGGTCACGTCAATTTTCGAGAAGCTTAATGTTTCTCTACTTTCCTCTTCCAAGTAATTGTCTTCCATTATTAGAAATTATGTTGGGTTATTCGACCTTCATTTTGGATGTCGTCGAGTGTTGGCTTATAAGTGTGACGAAAAACTCACCTCTTTGTGGCGTTTGGGGTTGAGAGAGCCGAGGAATATCAATTACTAGTATCAAAGTCAGGTTACAGGAAATCTGTTAAACTGGTTATGAAGGGTCGTGTTTATGTGAAGATCTAATTTGAAGTTTGTGCAATTCCTTATCGATGCGAAGATGCTAGACATGGAGTGTTGGTTTATAAAACATATGAGGCCGTTTTTGAGGTTGACTGAACCCATTCATACTAACATTGTGAGATTCCATATCGATTGGAGAGGGGACAAATGCCACCGACGACGCTGTGGCCCGAAGGAGGGTGGATTGTGAGATCCCACATCAGTTGGAGAGGGGAACGAAACATTGTTTATAAGGGTATAGAAACTTCTCCCTACTAGATGCGTTTTAAAAACCTTGAGGAAAACCATGGAAGAGAAAGCCCAAAAATGTGAGTTTGAGGTTTTACAAACACCATCTTGGATATTCTGCAGGTATAGATATATTTTTAGTGTCTTGTTTATCTGAAAAAAATGGCACAAATTTCTCATTATATCATGGTGAGTGCAAGTCAAAGGGAATTCTTGGCGTGAGCAAGCTTTTGCTGTACTGAAAATGGTTAACCTGTGTGACAGACTTTTAACTTAGCTTCACCTTAGAACTTCTGCTCACCTTATATTCCTACATATTCAGTCATCTGACTTCTCCAGCTCGTAGGTACCGAGCAATTACAAGTGCCTACTATCGAGGAGCAGTTGGTGCCCTGCTTGTGTACGACGTTACTCGACACGCTACCTATGAAAACGTTGAGAAGTGGTTGAAAGAGTTGAGAGATCATACAGATCCTAACACTGTAGTCATGCTGGTTGGCAACAAATCCGATCTTCGTCACCTTGTGGCAGTCCCAACCGAGGATGCAAAATCGTTTGCTGAAACAGAGTCCGTCTACTTCATGGAAACCTCCGCACTTGAATCCACAAACGTGGACAACGCATTCGTTGAAGTGCTTAAACAAATCTACCACTTGGTGAGCAAGAAGGCTATGGAAGCTAGCAATGATGCTGCTGCATCAGTTGTTCTAGCAAAAGGGGAGAGAATCGACATCAGCAAGGACGTGTCCGAGATAAAGAAAGGTGGTTGCTGTTCCAGCTAA

mRNA sequence

ATGTCTGCGTACAGAGCTGAAGACGACTATGACTATCTCTTTAAGGTCGTCTTAATCGGCGATTCTGGCGTTGGCAAGTCCAATTTGCTTTCCCGCTTTACCAAAAACGAGTTCAGCCTCGAAACTAAGTCCACTATTGGCGTTGAGTTTGCTACCCGCAGTTTGAGTATTGATGGCAGGGTTATCAAGGCTCAGATTTGGGACACCGCTGGCCAAGAACGGTACCGAGCAATTACAAGTGCCTACTATCGAGGAGCAGTTGGTGCCCTGCTTGTGTACGACGTTACTCGACACGCTACCTATGAAAACGTTGAGAAGTGGTTGAAAGAGTTGAGAGATCATACAGATCCTAACACTGTAGTCATGCTGGTTGGCAACAAATCCGATCTTCGTCACCTTGTGGCAGTCCCAACCGAGGATGCAAAATCGTTTGCTGAAACAGAGTCCGTCTACTTCATGGAAACCTCCGCACTTGAATCCACAAACGTGGACAACGCATTCGTTGAAGTGCTTAAACAAATCTACCACTTGGTGAGCAAGAAGGCTATGGAAGCTAGCAATGATGCTGCTGCATCAGTTGTTCTAGCAAAAGGGGAGAGAATCGACATCAGCAAGGACGTGTCCGAGATAAAGAAAGGTGGTTGCTGTTCCAGCTAA

Coding sequence (CDS)

ATGTCTGCGTACAGAGCTGAAGACGACTATGACTATCTCTTTAAGGTCGTCTTAATCGGCGATTCTGGCGTTGGCAAGTCCAATTTGCTTTCCCGCTTTACCAAAAACGAGTTCAGCCTCGAAACTAAGTCCACTATTGGCGTTGAGTTTGCTACCCGCAGTTTGAGTATTGATGGCAGGGTTATCAAGGCTCAGATTTGGGACACCGCTGGCCAAGAACGGTACCGAGCAATTACAAGTGCCTACTATCGAGGAGCAGTTGGTGCCCTGCTTGTGTACGACGTTACTCGACACGCTACCTATGAAAACGTTGAGAAGTGGTTGAAAGAGTTGAGAGATCATACAGATCCTAACACTGTAGTCATGCTGGTTGGCAACAAATCCGATCTTCGTCACCTTGTGGCAGTCCCAACCGAGGATGCAAAATCGTTTGCTGAAACAGAGTCCGTCTACTTCATGGAAACCTCCGCACTTGAATCCACAAACGTGGACAACGCATTCGTTGAAGTGCTTAAACAAATCTACCACTTGGTGAGCAAGAAGGCTATGGAAGCTAGCAATGATGCTGCTGCATCAGTTGTTCTAGCAAAAGGGGAGAGAATCGACATCAGCAAGGACGTGTCCGAGATAAAGAAAGGTGGTTGCTGTTCCAGCTAA

Protein sequence

MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGRVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLKELRDHTDPNTVVMLVGNKSDLRHLVAVPTEDAKSFAETESVYFMETSALESTNVDNAFVEVLKQIYHLVSKKAMEASNDAAASVVLAKGERIDISKDVSEIKKGGCCSS

Homology

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BLAST of Csor.00g115470 vs. ExPASy Swiss-Prot
Match: Q9FK68 (Ras-related protein RABA1c OS=Arabidopsis thaliana OX=3702 GN=RABA1C PE=1 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 2.9e-98
Identity = 180/218 (82.57%), Postives = 204/218 (93.58%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR 60
           M+ YRA+D+YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLE+KSTIGVEFATRSL++D +
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLKELRDHTDPNTV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+T+ENVE WLKELR+HTDPN V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDAKSFAETESVYFMETSALESTNVDNAFVEVLKQIYHLVSK 180
           VMLVGNKSDLRHLVAV TEDAKSFAE ES+YFMETSALE+TNV+NAF EVL QI+H+VSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK 180

Query: 181 KAMEASNDAAASVVLAKGERIDISKDVSEIKKGGCCSS 219
           KAMEA++++A   V +KG++IDI KDVS +KKGGCCS+
Sbjct: 181 KAMEAASESAN--VPSKGDKIDIGKDVSAVKKGGCCSN 216

[Close]

BLAST of Csor.00g115470 vs. ExPASy Swiss-Prot
Match: Q9SN35 (Ras-related protein RABA1d OS=Arabidopsis thaliana OX=3702 GN=RABA1D PE=1 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 4.7e-96
Identity = 179/218 (82.11%), Postives = 200/218 (91.74%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR 60
           M+ YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLE+KSTIGVEFATRSL+++ +
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLKELRDHTDPNTV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+T+ENVE+WL+ELRDHTDPN V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDAKSFAETESVYFMETSALESTNVDNAFVEVLKQIYHLVSK 180
           VMLVGNKSDLRHLVAV TEDAKSFAE ES+YFMETSALESTNV+NAF EVL QIYH+VSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180

Query: 181 KAMEASNDAAASVVLAKGERIDISKDVSEIKKGGCCSS 219
           KAMEA  D+    V +KGE+ID+  DVS +KK GCCS+
Sbjct: 181 KAMEAGEDSGN--VPSKGEKIDV--DVSAVKKTGCCSN 214

[Close]

BLAST of Csor.00g115470 vs. ExPASy Swiss-Prot
Match: P40393 (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC2 PE=2 SV=2)

HSP 1 Score: 351.7 bits (901), Expect = 6.1e-96
Identity = 174/216 (80.56%), Postives = 197/216 (91.20%), Query Frame = 0


Query: 2   SAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGRV 61
           + YRAEDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLE+KSTIGVEFATRSL +DG+V
Sbjct: 3   AGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKV 62

Query: 62  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLKELRDHTDPNTVV 121
           +KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+T+ENVE+WLKELRDHTDPN VV
Sbjct: 63  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVV 122

Query: 122 MLVGNKSDLRHLVAVPTEDAKSFAETESVYFMETSALESTNVDNAFVEVLKQIYHLVSKK 181
           MLVGNKSDLRHLVAV T++ K+FAE ES+YFMETSALESTNV+NAF EVL QIY +VSK+
Sbjct: 123 MLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKR 182

Query: 182 AMEASNDAAASVVLAKGERIDISKDVSEIKKGGCCS 218
           ++EA +DA +     KGE+I+I  DVS +KKGGCCS
Sbjct: 183 SVEAGDDAGSGP--GKGEKINIKDDVSAVKKGGCCS 216

[Close]

BLAST of Csor.00g115470 vs. ExPASy Swiss-Prot
Match: Q39222 (Ras-related protein RABA1b OS=Arabidopsis thaliana OX=3702 GN=RABA1B PE=1 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 1.8e-92
Identity = 169/218 (77.52%), Postives = 194/218 (88.99%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR 60
           M+ YR EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LE+KSTIGVEFATR+L +DG+
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLKELRDHTDPNTV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR AT+ENV++WLKEL++HTDPN V
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDAKSFAETESVYFMETSALESTNVDNAFVEVLKQIYHLVSK 180
           VMLVGNKSDLRHL+AVPTED KS+AE ES+ FMETSALE+TNV++AF EVL QIY + SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180

Query: 181 KAMEASNDAAASVVLAKGERIDISKDVSEIKKGGCCSS 219
           K +EA  D  ASV   KGE+I++  DVS +KK GCCS+
Sbjct: 181 KQVEAGEDGNASV--PKGEKIEVKNDVSALKKLGCCSN 216

[Close]

BLAST of Csor.00g115470 vs. ExPASy Swiss-Prot
Match: Q40194 (Ras-related protein Rab11D OS=Lotus japonicus OX=34305 GN=RAB11D PE=2 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 1.2e-91
Identity = 163/218 (74.77%), Postives = 195/218 (89.45%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR 60
           M  YR +D+YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LE+KSTIGVEFAT++L++D +
Sbjct: 1   MGGYRTDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLKELRDHTDPNTV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR AT+EN  +WLKELRDHTDPN V
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDAKSFAETESVYFMETSALESTNVDNAFVEVLKQIYHLVSK 180
           VML+GNKSDLRHLVAVPTED KSFAE ES+YFMETSALE+TNV+NAF EVL QIY +VSK
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSK 180

Query: 181 KAMEASNDAAASVVLAKGERIDISKDVSEIKKGGCCSS 219
           +A+EA +  ++S + +KG+ I++ +D S +K+ GCCS+
Sbjct: 181 RAVEAGDSGSSSGLPSKGQTINVKEDSSVLKRFGCCST 218

[Close]

BLAST of Csor.00g115470 vs. NCBI nr
Match: KAG6594535.1 (Ras-related protein RABA1c, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 427 bits (1097), Expect = 1.55e-150
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLKELRDHTDPNTV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLKELRDHTDPNTV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLKELRDHTDPNTV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDAKSFAETESVYFMETSALESTNVDNAFVEVLKQIYHLVSK 180
           VMLVGNKSDLRHLVAVPTEDAKSFAETESVYFMETSALESTNVDNAFVEVLKQIYHLVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDAKSFAETESVYFMETSALESTNVDNAFVEVLKQIYHLVSK 180

Query: 181 KAMEASNDAAASVVLAKGERIDISKDVSEIKKGGCCSS 218
           KAMEASNDAAASVVLAKGERIDISKDVSEIKKGGCCSS
Sbjct: 181 KAMEASNDAAASVVLAKGERIDISKDVSEIKKGGCCSS 218

[Close]

BLAST of Csor.00g115470 vs. NCBI nr
Match: XP_023518462.1 (ras-related protein RABA1c-like [Cucurbita pepo subsp. pepo] >KAG7026514.1 Ras-related protein RABA1c, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 424 bits (1091), Expect = 1.27e-149
Identity = 217/218 (99.54%), Postives = 217/218 (99.54%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLKELRDHTDPNTV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLKELRDHTDPN V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDAKSFAETESVYFMETSALESTNVDNAFVEVLKQIYHLVSK 180
           VMLVGNKSDLRHLVAVPTEDAKSFAETESVYFMETSALESTNVDNAFVEVLKQIYHLVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDAKSFAETESVYFMETSALESTNVDNAFVEVLKQIYHLVSK 180

Query: 181 KAMEASNDAAASVVLAKGERIDISKDVSEIKKGGCCSS 218
           KAMEASNDAAASVVLAKGERIDISKDVSEIKKGGCCSS
Sbjct: 181 KAMEASNDAAASVVLAKGERIDISKDVSEIKKGGCCSS 218

[Close]

BLAST of Csor.00g115470 vs. NCBI nr
Match: XP_023003676.1 (ras-related protein RABA1c-like [Cucurbita maxima])

HSP 1 Score: 422 bits (1085), Expect = 1.05e-148
Identity = 215/218 (98.62%), Postives = 217/218 (99.54%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLKELRDHTDPNTV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLKEL+DHTDPN V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLKELKDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDAKSFAETESVYFMETSALESTNVDNAFVEVLKQIYHLVSK 180
           VMLVGNKSDLRHLVAVPTEDAKSFAETESVYFMETSALESTNVDNAFVEVLKQIYHLVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDAKSFAETESVYFMETSALESTNVDNAFVEVLKQIYHLVSK 180

Query: 181 KAMEASNDAAASVVLAKGERIDISKDVSEIKKGGCCSS 218
           KAMEASNDAAASVVLAKGERIDISKDVS+IKKGGCCSS
Sbjct: 181 KAMEASNDAAASVVLAKGERIDISKDVSDIKKGGCCSS 218

[Close]

BLAST of Csor.00g115470 vs. NCBI nr
Match: XP_022926955.1 (ras-related protein RABA1c-like [Cucurbita moschata])

HSP 1 Score: 419 bits (1077), Expect = 1.73e-147
Identity = 215/218 (98.62%), Postives = 215/218 (98.62%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLKELRDHTDPNTV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWL ELRDHTDPN V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLNELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDAKSFAETESVYFMETSALESTNVDNAFVEVLKQIYHLVSK 180
           VMLVGNKSDLRHLVAVPTEDAKSFAETESV FMETSALESTNVDNAFVEVLKQIYHLVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDAKSFAETESVCFMETSALESTNVDNAFVEVLKQIYHLVSK 180

Query: 181 KAMEASNDAAASVVLAKGERIDISKDVSEIKKGGCCSS 218
           KAMEASNDAAASVVLAKGERIDISKDVSEIKKGGCCSS
Sbjct: 181 KAMEASNDAAASVVLAKGERIDISKDVSEIKKGGCCSS 218

[Close]

BLAST of Csor.00g115470 vs. NCBI nr
Match: XP_038892728.1 (ras-related protein RABA1c-like [Benincasa hispida])

HSP 1 Score: 402 bits (1034), Expect = 6.23e-141
Identity = 201/218 (92.20%), Postives = 213/218 (97.71%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLE+KSTIGVEFATRSL++DG+
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLKELRDHTDPNTV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TYENVEKWLKELRDHTDPN V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDAKSFAETESVYFMETSALESTNVDNAFVEVLKQIYHLVSK 180
           VMLVGNKSDLRHLVAV TEDAKSFAETES+YFMETSALE+TNVDNAF EVL QIYH+VSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180

Query: 181 KAMEASNDAAASVVLAKGERIDISKDVSEIKKGGCCSS 218
           KAMEA++DAAAS VLAKGE+IDISKDVSE+KKGGCCSS
Sbjct: 181 KAMEANDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 218

[Close]

BLAST of Csor.00g115470 vs. ExPASy TrEMBL
Match: A0A6J1KPX0 (ras-related protein RABA1c-like OS=Cucurbita maxima OX=3661 GN=LOC111497198 PE=4 SV=1)

HSP 1 Score: 422 bits (1085), Expect = 5.06e-149
Identity = 215/218 (98.62%), Postives = 217/218 (99.54%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLKELRDHTDPNTV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLKEL+DHTDPN V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLKELKDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDAKSFAETESVYFMETSALESTNVDNAFVEVLKQIYHLVSK 180
           VMLVGNKSDLRHLVAVPTEDAKSFAETESVYFMETSALESTNVDNAFVEVLKQIYHLVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDAKSFAETESVYFMETSALESTNVDNAFVEVLKQIYHLVSK 180

Query: 181 KAMEASNDAAASVVLAKGERIDISKDVSEIKKGGCCSS 218
           KAMEASNDAAASVVLAKGERIDISKDVS+IKKGGCCSS
Sbjct: 181 KAMEASNDAAASVVLAKGERIDISKDVSDIKKGGCCSS 218

[Close]

BLAST of Csor.00g115470 vs. ExPASy TrEMBL
Match: A0A6J1EMI6 (ras-related protein RABA1c-like OS=Cucurbita moschata OX=3662 GN=LOC111433916 PE=4 SV=1)

HSP 1 Score: 419 bits (1077), Expect = 8.40e-148
Identity = 215/218 (98.62%), Postives = 215/218 (98.62%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLKELRDHTDPNTV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWL ELRDHTDPN V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLNELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDAKSFAETESVYFMETSALESTNVDNAFVEVLKQIYHLVSK 180
           VMLVGNKSDLRHLVAVPTEDAKSFAETESV FMETSALESTNVDNAFVEVLKQIYHLVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDAKSFAETESVCFMETSALESTNVDNAFVEVLKQIYHLVSK 180

Query: 181 KAMEASNDAAASVVLAKGERIDISKDVSEIKKGGCCSS 218
           KAMEASNDAAASVVLAKGERIDISKDVSEIKKGGCCSS
Sbjct: 181 KAMEASNDAAASVVLAKGERIDISKDVSEIKKGGCCSS 218

[Close]

BLAST of Csor.00g115470 vs. ExPASy TrEMBL
Match: A0A5D3CP64 (Ras-related protein RABA1c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008350 PE=4 SV=1)

HSP 1 Score: 400 bits (1028), Expect = 2.48e-140
Identity = 199/218 (91.28%), Postives = 212/218 (97.25%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLE+KSTIGVEFATRSL++DG+
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLKELRDHTDPNTV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TYENVEKWLKELRDHTDPN V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDAKSFAETESVYFMETSALESTNVDNAFVEVLKQIYHLVSK 180
           VMLVGNKSDLRHLVAV TEDAKSFAETES+YFMETSALE+TNVDNAF EVL QIYH+VSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180

Query: 181 KAMEASNDAAASVVLAKGERIDISKDVSEIKKGGCCSS 218
           KAME ++DAAAS V+AKGE+IDISKDVSE+KKGGCCSS
Sbjct: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 218

[Close]

BLAST of Csor.00g115470 vs. ExPASy TrEMBL
Match: E5GC30 (GTP-binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 400 bits (1028), Expect = 2.48e-140
Identity = 199/218 (91.28%), Postives = 212/218 (97.25%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLE+KSTIGVEFATRSL++DG+
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLKELRDHTDPNTV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TYENVEKWLKELRDHTDPN V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDAKSFAETESVYFMETSALESTNVDNAFVEVLKQIYHLVSK 180
           VMLVGNKSDLRHLVAV TEDAKSFAETES+YFMETSALE+TNVDNAF EVL QIYH+VSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180

Query: 181 KAMEASNDAAASVVLAKGERIDISKDVSEIKKGGCCSS 218
           KAME ++DAAAS V+AKGE+IDISKDVSE+KKGGCCSS
Sbjct: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 218

[Close]

BLAST of Csor.00g115470 vs. ExPASy TrEMBL
Match: A0A0A0KNM1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519720 PE=4 SV=1)

HSP 1 Score: 400 bits (1028), Expect = 2.48e-140
Identity = 199/218 (91.28%), Postives = 212/218 (97.25%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLE+KSTIGVEFATRSL++DG+
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLKELRDHTDPNTV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TYENVEKWLKELRDHTDPN V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDAKSFAETESVYFMETSALESTNVDNAFVEVLKQIYHLVSK 180
           VMLVGNKSDLRHLVAV TEDAKSFAETES+YFMETSALE+TNVDNAF EVL QIYH+VSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180

Query: 181 KAMEASNDAAASVVLAKGERIDISKDVSEIKKGGCCSS 218
           KAME ++DAAAS V+AKGE+IDISKDVSE+KKGGCCSS
Sbjct: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 218

[Close]

BLAST of Csor.00g115470 vs. TAIR 10
Match: AT5G45750.1 (RAB GTPase homolog A1C )

HSP 1 Score: 359.4 bits (921), Expect = 2.1e-99
Identity = 180/218 (82.57%), Postives = 204/218 (93.58%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR 60
           M+ YRA+D+YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLE+KSTIGVEFATRSL++D +
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLKELRDHTDPNTV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+T+ENVE WLKELR+HTDPN V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDAKSFAETESVYFMETSALESTNVDNAFVEVLKQIYHLVSK 180
           VMLVGNKSDLRHLVAV TEDAKSFAE ES+YFMETSALE+TNV+NAF EVL QI+H+VSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK 180

Query: 181 KAMEASNDAAASVVLAKGERIDISKDVSEIKKGGCCSS 219
           KAMEA++++A   V +KG++IDI KDVS +KKGGCCS+
Sbjct: 181 KAMEAASESAN--VPSKGDKIDIGKDVSAVKKGGCCSN 216

[Close]

BLAST of Csor.00g115470 vs. TAIR 10
Match: AT4G18800.1 (RAB GTPase homolog A1D )

HSP 1 Score: 352.1 bits (902), Expect = 3.3e-97
Identity = 179/218 (82.11%), Postives = 200/218 (91.74%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR 60
           M+ YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLE+KSTIGVEFATRSL+++ +
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLKELRDHTDPNTV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+T+ENVE+WL+ELRDHTDPN V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDAKSFAETESVYFMETSALESTNVDNAFVEVLKQIYHLVSK 180
           VMLVGNKSDLRHLVAV TEDAKSFAE ES+YFMETSALESTNV+NAF EVL QIYH+VSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180

Query: 181 KAMEASNDAAASVVLAKGERIDISKDVSEIKKGGCCSS 219
           KAMEA  D+    V +KGE+ID+  DVS +KK GCCS+
Sbjct: 181 KAMEAGEDSGN--VPSKGEKIDV--DVSAVKKTGCCSN 214

[Close]

BLAST of Csor.00g115470 vs. TAIR 10
Match: AT1G16920.1 (RAB GTPase homolog A1B )

HSP 1 Score: 340.1 bits (871), Expect = 1.3e-93
Identity = 169/218 (77.52%), Postives = 194/218 (88.99%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR 60
           M+ YR EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LE+KSTIGVEFATR+L +DG+
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLKELRDHTDPNTV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR AT+ENV++WLKEL++HTDPN V
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDAKSFAETESVYFMETSALESTNVDNAFVEVLKQIYHLVSK 180
           VMLVGNKSDLRHL+AVPTED KS+AE ES+ FMETSALE+TNV++AF EVL QIY + SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180

Query: 181 KAMEASNDAAASVVLAKGERIDISKDVSEIKKGGCCSS 219
           K +EA  D  ASV   KGE+I++  DVS +KK GCCS+
Sbjct: 181 KQVEAGEDGNASV--PKGEKIEVKNDVSALKKLGCCSN 216

[Close]

BLAST of Csor.00g115470 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 328.2 bits (840), Expect = 5.1e-90
Identity = 164/220 (74.55%), Postives = 192/220 (87.27%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR 60
           M+AYRA+D+YDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLE+KSTIGVEFATRS+ +D +
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLKELRDHTDPNTV 120
           ++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH T+ENVE+WLKELRDHTD N V
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDAKSFAETESVYFMETSALESTNVDNAFVEVLKQIYHLVSK 180
           +M VGNK+DLRHL AV TEDAK+FAE E+ +FMETSALES NV+NAF EVL QIY +VS+
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 181 KAMEASNDAAASVVLAKGERIDISK--DVSEIKKGGCCSS 219
           KA++  +D AA   L KG+ I++    DVS +KK GCCS+
Sbjct: 181 KALDIGDDPAA---LPKGQTINVGSKDDVSAVKKVGCCSN 217

[Close]

BLAST of Csor.00g115470 vs. TAIR 10
Match: AT3G15060.1 (RAB GTPase homolog A1G )

HSP 1 Score: 325.9 bits (834), Expect = 2.5e-89
Identity = 162/220 (73.64%), Postives = 191/220 (86.82%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR 60
           M+AYRA+DDYD+L+KVVLIGDSGVGKSNLLSRFT+NEFSLE+KSTIGVEFATRS+ +D +
Sbjct: 1   MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLKELRDHTDPNTV 120
           ++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH T+ENVE+WLKELRDHT+ N V
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDAKSFAETESVYFMETSALESTNVDNAFVEVLKQIYHLVSK 180
           +MLVGNK+DLRHL AV TEDAK+FAE E+ +FMETSALE+ NV+NAF EVL QIY + SK
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180

Query: 181 KAMEASNDAAASVVLAKGERIDISK--DVSEIKKGGCCSS 219
           KA++  +D      L KG+ I++    DVSE+KK GCCSS
Sbjct: 181 KALDIGDD---HTTLPKGQSINVGSKDDVSEVKKVGCCSS 217

The following BLAST results are available for this feature:

BLAST of Csor.00g115470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK68	2.9e-98	82.57	Ras-related protein RABA1c OS=Arabidopsis thaliana OX=3702 GN=RABA1C PE=1 SV=1	[more]
Q9SN35	4.7e-96	82.11	Ras-related protein RABA1d OS=Arabidopsis thaliana OX=3702 GN=RABA1D PE=1 SV=1	[more]
P40393	6.1e-96	80.56	Ras-related protein RIC2 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC2 PE=2 S...	[more]
Q39222	1.8e-92	77.52	Ras-related protein RABA1b OS=Arabidopsis thaliana OX=3702 GN=RABA1B PE=1 SV=1	[more]
Q40194	1.2e-91	74.77	Ras-related protein Rab11D OS=Lotus japonicus OX=34305 GN=RAB11D PE=2 SV=1	[more]

BLAST of Csor.00g115470 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6594535.1	1.55e-150	100.00	Ras-related protein RABA1c, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023518462.1	1.27e-149	99.54	ras-related protein RABA1c-like [Cucurbita pepo subsp. pepo] >KAG7026514.1 Ras-r...	[more]
XP_023003676.1	1.05e-148	98.62	ras-related protein RABA1c-like [Cucurbita maxima]	[more]
XP_022926955.1	1.73e-147	98.62	ras-related protein RABA1c-like [Cucurbita moschata]	[more]
XP_038892728.1	6.23e-141	92.20	ras-related protein RABA1c-like [Benincasa hispida]	[more]

BLAST of Csor.00g115470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KPX0	5.06e-149	98.62	ras-related protein RABA1c-like OS=Cucurbita maxima OX=3661 GN=LOC111497198 PE=4...	[more]
A0A6J1EMI6	8.40e-148	98.62	ras-related protein RABA1c-like OS=Cucurbita moschata OX=3662 GN=LOC111433916 PE...	[more]
A0A5D3CP64	2.48e-140	91.28	Ras-related protein RABA1c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
E5GC30	2.48e-140	91.28	GTP-binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A0A0KNM1	2.48e-140	91.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519720 PE=4 SV=1	[more]

BLAST of Csor.00g115470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45750.1	2.1e-99	82.57	RAB GTPase homolog A1C	[more]
AT4G18800.1	3.3e-97	82.11	RAB GTPase homolog A1D	[more]
AT1G16920.1	1.3e-93	77.52	RAB GTPase homolog A1B	[more]
AT5G60860.1	5.1e-90	74.55	RAB GTPase homolog A1F	[more]
AT3G15060.1	2.5e-89	73.64	RAB GTPase homolog A1G	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 55..77 score: 53.02 coord: 152..174 score: 40.44 coord: 117..130 score: 53.45 coord: 14..35 score: 55.22 coord: 37..53 score: 36.07
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 e-value: 2.8E-109 score: 379.0
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..217 e-value: 1.4E-5 score: 29.8
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 e-value: 5.7E-25 score: 99.0
None	No IPR available	PANTHER	PTHR47979:SF27	RAS-RELATED PROTEIN RIC2	coord: 1..218
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..218
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..216 score: 35.340237
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..186 score: 10.829132
None	No IPR available	CDD	cd01868	Rab11_like	coord: 11..175 e-value: 8.25009E-125 score: 348.01
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..177 e-value: 5.0E-14 score: 59.2
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..175 e-value: 9.6E-61 score: 204.1
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 2..195 score: 15.960552
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 6..216 e-value: 2.0E-71 score: 241.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..183
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..170 e-value: 1.5E-39 score: 133.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g115470.m01	Csor.00g115470.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0005768	endosome
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding