Csor.00g114860 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g114860
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	dof zinc finger protein DOF5.6-like
Location	Csor_Chr07: 1140611 .. 1141471 (-)
RNA-Seq Expression	Csor.00g114860
Synteny	Csor.00g114860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGCGTGGGCGAGATGATCAAGATCGGAGATTGAAGGCTCTACAAGCGCAAAATCAAGCTCAGCCACAGCCACAAAAATGCCCTCGTTGTGATTCTCTCAACACAAAGTTTTGTTATTACAATAACTACAGCTTATCTCAGCCTCGTTATCTTTGCAAGACTTGTAGAAGGTACTGGACTCACGGTGGTACTCTCCGTAACGTCCCCGTCGGCGGTGGCTGCCGGAAGGGTAAACGACCCAAGCAATCTTCTCACTCATCCGACAACTCCAACTCACAACCGTTGCCATCACTACCGCTGCCGCAGATAGTCCAATCCAGTTTAACAACAACTCCGCCGCCCGTAATTTTCTCGGGTACTCCCGTCATCACGCCGTCCTCTTTTTTCAATCCTGGTGAGCAAGATTAGAACTTGACCTTAATTTAGTTAAAAAAAAAATCTCTTTTTTTGAATCAATTTCTCAGTCCTTCCTATTTTGTTGGAATCATGGAATAAAAAAGATGGAATTTTTATGATGCAGTTGGAGAATTGGGGTCATCTTCCAGCTGGGTCAATTCATTTGGATCATCACAAGGGCAGCGTCCAATTCAACCACCGGAAATAATCTACGAAATGATGGACCAATCATCAGGGAAGGCCGCCGTGAGTTCATCTTCTCAAGCAGGGTGGTCGGAAAGTTACATCAACAATTATATTTCAAACCCAATCGCCGCAGCAGCCGGAGAGAACATTGTCTGGACACCAAACAACAACAACAACAACAATACCGCCATGGCGGCCACAGGCAACCCCACGAACAATAGTACTACAATTAACCAGTGGCCTGATTACATGGCAGGATTCGATCCACCCCCATGA

mRNA sequence

ATGCAGCGTGGGCGAGATGATCAAGATCGGAGATTGAAGGCTCTACAAGCGCAAAATCAAGCTCAGCCACAGCCACAAAAATGCCCTCGTTGTGATTCTCTCAACACAAAGTTTTGTTATTACAATAACTACAGCTTATCTCAGCCTCGTTATCTTTGCAAGACTTGTAGAAGGTACTGGACTCACGGTGGTACTCTCCGTAACGTCCCCGTCGGCGGTGGCTGCCGGAAGGGTAAACGACCCAAGCAATCTTCTCACTCATCCGACAACTCCAACTCACAACCGTTGCCATCACTACCGCTGCCGCAGATAGTCCAATCCAGTTTAACAACAACTCCGCCGCCCGTAATTTTCTCGGGTACTCCCGTCATCACGCCGTCCTCTTTTTTCAATCCTGTTGGAGAATTGGGGTCATCTTCCAGCTGGGTCAATTCATTTGGATCATCACAAGGGCAGCGTCCAATTCAACCACCGGAAATAATCTACGAAATGATGGACCAATCATCAGGGAAGGCCGCCGTGAGTTCATCTTCTCAAGCAGGGTGGTCGGAAAGTTACATCAACAATTATATTTCAAACCCAATCGCCGCAGCAGCCGGAGAGAACATTGTCTGGACACCAAACAACAACAACAACAACAATACCGCCATGGCGGCCACAGGCAACCCCACGAACAATAGTACTACAATTAACCAGTGGCCTGATTACATGGCAGGATTCGATCCACCCCCATGA

Coding sequence (CDS)

ATGCAGCGTGGGCGAGATGATCAAGATCGGAGATTGAAGGCTCTACAAGCGCAAAATCAAGCTCAGCCACAGCCACAAAAATGCCCTCGTTGTGATTCTCTCAACACAAAGTTTTGTTATTACAATAACTACAGCTTATCTCAGCCTCGTTATCTTTGCAAGACTTGTAGAAGGTACTGGACTCACGGTGGTACTCTCCGTAACGTCCCCGTCGGCGGTGGCTGCCGGAAGGGTAAACGACCCAAGCAATCTTCTCACTCATCCGACAACTCCAACTCACAACCGTTGCCATCACTACCGCTGCCGCAGATAGTCCAATCCAGTTTAACAACAACTCCGCCGCCCGTAATTTTCTCGGGTACTCCCGTCATCACGCCGTCCTCTTTTTTCAATCCTGTTGGAGAATTGGGGTCATCTTCCAGCTGGGTCAATTCATTTGGATCATCACAAGGGCAGCGTCCAATTCAACCACCGGAAATAATCTACGAAATGATGGACCAATCATCAGGGAAGGCCGCCGTGAGTTCATCTTCTCAAGCAGGGTGGTCGGAAAGTTACATCAACAATTATATTTCAAACCCAATCGCCGCAGCAGCCGGAGAGAACATTGTCTGGACACCAAACAACAACAACAACAACAATACCGCCATGGCGGCCACAGGCAACCCCACGAACAATAGTACTACAATTAACCAGTGGCCTGATTACATGGCAGGATTCGATCCACCCCCATGA

Protein sequence

MQRGRDDQDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSGTPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEIIYEMMDQSSGKAAVSSSSQAGWSESYINNYISNPIAAAAGENIVWTPNNNNNNNTAMAATGNPTNNSTTINQWPDYMAGFDPPP

Homology

[Close]

BLAST of Csor.00g114860 vs. ExPASy Swiss-Prot
Match: Q8LDR0 (Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana OX=3702 GN=DOF5.4 PE=2 SV=2)

HSP 1 Score: 117.9 bits (294), Expect = 1.7e-25
Identity = 56/87 (64.37%), Postives = 63/87 (72.41%), Query Frame = 0


Query: 9   DRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLRN 68
           DRR++A Q       Q  KCPRC+SLNTKFCYYNNY+LSQPR+ CK CRRYWT GG LRN
Sbjct: 34  DRRMRAHQNNILNHHQSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRN 93

Query: 69  VPVGGGCRKGKRPKQSSHSSDNSNSQP 96
           VPVGGGCRK KR K     S +S  +P
Sbjct: 94  VPVGGGCRKAKRSKTKQVPSSSSADKP 120

[Close]

BLAST of Csor.00g114860 vs. ExPASy Swiss-Prot
Match: O24463 (Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.7e-25
Identity = 61/129 (47.29%), Postives = 81/129 (62.79%), Query Frame = 0


Query: 8   QDRRLKALQAQNQAQPQPQ-----KCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTH 67
           Q R +  +    + +P+PQ     KCPRCDS NTKFCYYNNYS+SQPRY CK CRRYWTH
Sbjct: 37  QTRAMPQIGGSGERKPRPQLPEALKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTH 96

Query: 68  GGTLRNVPVGGGCRKGKRPKQ---SSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFS 127
           GGTLRNVP+GGGCRK K   +    SH+S +S++   P  P      S+++     ++  
Sbjct: 97  GGTLRNVPIGGGCRKNKHASRFVLGSHTSSSSSATYAPLSPSTNASSSNMSINKHMMMVP 156

Query: 128 GTPVITPSS 129
              + TP++
Sbjct: 157 NMTMPTPTT 165

[Close]

BLAST of Csor.00g114860 vs. ExPASy Swiss-Prot
Match: Q9FZA4 (Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana OX=3702 GN=DOF1.4 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.1e-24
Identity = 55/79 (69.62%), Postives = 61/79 (77.22%), Query Frame = 0


Query: 16 QAQNQAQPQPQ-KCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLRNVPVGGG 75
          Q Q   QPQPQ KCPRCDS NTKFCYYNNYSLSQPR+ CK C+RYWT GGTLRNVPVGG 
Sbjct: 16 QQQQPQQPQPQLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGS 75

Query: 76 CRKGKRPKQSSHSSDNSNS 94
           RK KR K+ S ++  + S
Sbjct: 76 YRKNKRVKRPSTATTTTAS 94

[Close]

BLAST of Csor.00g114860 vs. ExPASy Swiss-Prot
Match: O80928 (Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana OX=3702 GN=DOF2.4 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.8e-24
Identity = 50/81 (61.73%), Postives = 63/81 (77.78%), Query Frame = 0


Query: 13  KALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLRNVPVG 72
           +A QA         KCPRC+S NTKFCY+NNYSL+QPR+ CKTCRRYWT GG LRNVPVG
Sbjct: 76  RARQANVALPEAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVG 135

Query: 73  GGCRKGKRPKQSSHSSDNSNS 94
           GGCR+ +R K +S++++NS +
Sbjct: 136 GGCRRNRRTKSNSNNNNNSTA 156

[Close]

BLAST of Csor.00g114860 vs. ExPASy Swiss-Prot
Match: Q9M161 (Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana OX=3702 GN=DOF4.1 PE=2 SV=2)

HSP 1 Score: 113.6 bits (283), Expect = 3.1e-24
Identity = 58/109 (53.21%), Postives = 79/109 (72.48%), Query Frame = 0


Query: 6   DDQDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGT 65
           DD+ + +  +  + Q   +P+ CPRC+S NTKFCYYNNYSL+QPRYLCK+CRRYWT GG+
Sbjct: 51  DDEKKLMTTMSTRPQ---EPRNCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGS 110

Query: 66  LRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPP 115
           LRNVPVGGG RK K+     +SS +S+++ LP L  P +  SS +++ P
Sbjct: 111 LRNVPVGGGSRKNKK-LPFPNSSTSSSTKNLPDLNPPFVFTSSASSSNP 155

[Close]

BLAST of Csor.00g114860 vs. NCBI nr
Match: XP_022926378.1 (dof zinc finger protein DOF5.6-like [Cucurbita moschata] >KAG6594596.1 Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 489 bits (1259), Expect = 2.29e-174
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0


Query: 1   MQRGRDDQDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW 60
           MQRGRDDQDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW
Sbjct: 1   MQRGRDDQDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW 60

Query: 61  THGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG 120
           THGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG
Sbjct: 61  THGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG 120

Query: 121 TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEIIYEMMDQSSGKAAVSSSSQA 180
           TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEIIYEMMDQSSGKAAVSSSSQA
Sbjct: 121 TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEIIYEMMDQSSGKAAVSSSSQA 180

Query: 181 GWSESYINNYISNPIAAAAGENIVWTPNNNNNNNTAMAATGNPTNNSTTINQWPDYMAGF 240
           GWSESYINNYISNPIAAAAGENIVWTPNNNNNNNTAMAATGNPTNNSTTINQWPDYMAGF
Sbjct: 181 GWSESYINNYISNPIAAAAGENIVWTPNNNNNNNTAMAATGNPTNNSTTINQWPDYMAGF 240

Query: 241 DPPP 244
           DPPP
Sbjct: 241 DPPP 244

[Close]

BLAST of Csor.00g114860 vs. NCBI nr
Match: KAG7026567.1 (Dof zinc finger protein DOF5.4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 479 bits (1232), Expect = 2.88e-170
Identity = 241/244 (98.77%), Postives = 242/244 (99.18%), Query Frame = 0


Query: 1   MQRGRDDQDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW 60
           MQRGRDDQDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW
Sbjct: 1   MQRGRDDQDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW 60

Query: 61  THGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG 120
           THGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG
Sbjct: 61  THGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG 120

Query: 121 TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEIIYEMMDQSSGKAAVSSSSQA 180
           TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEIIYEMMDQSSGKAAVSSSSQA
Sbjct: 121 TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEIIYEMMDQSSGKAAVSSSSQA 180

Query: 181 GWSESYINNYISNPIAAAAGENIVWTPNNNNNNNTAMAATGNPTNNSTTINQWPDYMAGF 240
           GWSESYINNYISNPIAAAAGENIVWTPNNNNN +TA AATGNPTNNSTTINQWPDYMAGF
Sbjct: 181 GWSESYINNYISNPIAAAAGENIVWTPNNNNN-DTATAATGNPTNNSTTINQWPDYMAGF 240

Query: 241 DPPP 244
           DPPP
Sbjct: 241 DPPP 243

[Close]

BLAST of Csor.00g114860 vs. NCBI nr
Match: XP_023003351.1 (dof zinc finger protein DOF5.6-like [Cucurbita maxima])

HSP 1 Score: 455 bits (1170), Expect = 7.87e-161
Identity = 229/244 (93.85%), Postives = 234/244 (95.90%), Query Frame = 0


Query: 1   MQRGRDDQDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW 60
           MQRGRDDQDRRLKALQ QNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW
Sbjct: 1   MQRGRDDQDRRLKALQPQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW 60

Query: 61  THGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG 120
           T GGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG
Sbjct: 61  TQGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG 120

Query: 121 TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEIIYEMMDQSSGKAAVSSSSQA 180
           TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPE+IYE+MDQSSGKAAVSSSSQA
Sbjct: 121 TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEVIYEIMDQSSGKAAVSSSSQA 180

Query: 181 GWSESYINNYISNPIAAAAGENIVWTPNNNNNNNTAMAATGNPTNNSTTINQWPDYMAGF 240
           GWSESYINNYISNP+AAA GEN+VWTPNNNNN +T     GNPTNNSTTINQWPDYM GF
Sbjct: 181 GWSESYINNYISNPMAAA-GENLVWTPNNNNN-DTPTTTAGNPTNNSTTINQWPDYMKGF 240

Query: 241 DPPP 244
           DPPP
Sbjct: 241 DPPP 242

[Close]

BLAST of Csor.00g114860 vs. NCBI nr
Match: XP_023517464.1 (dof zinc finger protein DOF5.6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 442 bits (1137), Expect = 7.03e-156
Identity = 226/244 (92.62%), Postives = 231/244 (94.67%), Query Frame = 0


Query: 1   MQRGRDDQDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW 60
           MQRGRDDQDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW
Sbjct: 1   MQRGRDDQDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW 60

Query: 61  THGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG 120
           T GGTLRNVPVGGGCRKGKRPKQSSHSS+NSNSQPLP     QIVQSSLTTTPPPVIFSG
Sbjct: 61  TQGGTLRNVPVGGGCRKGKRPKQSSHSSNNSNSQPLP-----QIVQSSLTTTPPPVIFSG 120

Query: 121 TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEIIYEMMDQSSGKAAVSSSSQA 180
           TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEIIY+MMDQSSGKAAVSSSSQA
Sbjct: 121 TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEIIYDMMDQSSGKAAVSSSSQA 180

Query: 181 GWSESYINNYISNPIAAAAGENIVWTPNNNNNNNTAMAATGNPTNNSTTINQWPDYMAGF 240
           GWSESYINNYISNPIAAA GENI+WTPNNNNN +TA    GNPTN+STTINQWPDYM GF
Sbjct: 181 GWSESYINNYISNPIAAA-GENIIWTPNNNNN-DTATTIAGNPTNDSTTINQWPDYMTGF 237

Query: 241 DPPP 244
           DPPP
Sbjct: 241 DPPP 237

[Close]

BLAST of Csor.00g114860 vs. NCBI nr
Match: XP_038882844.1 (dof zinc finger protein DOF1.4-like [Benincasa hispida])

HSP 1 Score: 330 bits (845), Expect = 2.09e-111
Identity = 179/240 (74.58%), Postives = 192/240 (80.00%), Query Frame = 0


Query: 8   QDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLR 67
           QDRRLK++Q Q+Q QPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLR
Sbjct: 4   QDRRLKSVQVQDQVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLR 63

Query: 68  NVPVGGGCRKGKRPKQSSHSSDN--SNSQPLPSLPLPQIVQSSLTTTPPPVIFSGTPVIT 127
           NVPVGGGCRKGKRPKQSS SS+    + QP PSLP P  +  + TTT   VIFSGTPVIT
Sbjct: 64  NVPVGGGCRKGKRPKQSSQSSNTIVKSLQPSPSLPPPLPLSLTSTTTSQHVIFSGTPVIT 123

Query: 128 PSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEIIYEMMDQSSGKAAVSSSSQ-AGWSE 187
           P SFFNP G+L SSSSW+NSFGSS+GQ  IQP EIIYEMM QSSGKAAVSSSS  AGW E
Sbjct: 124 PPSFFNPGGDLLSSSSWINSFGSSEGQCQIQPQEIIYEMMGQSSGKAAVSSSSPPAGWPE 183

Query: 188 SYINNYISNPIAAAAGENIVWTPNNNNNNNTAMAATGNPTNNSTTINQWPDYMAGFDPPP 244
           SYINN ISNP+AAA G+ IVW   NNN      AAT   T N+ T NQWPDYM GF PPP
Sbjct: 184 SYINNSISNPMAAA-GDAIVWPAGNNN-----TAATATTTANNATTNQWPDYMPGFCPPP 237

[Close]

BLAST of Csor.00g114860 vs. ExPASy TrEMBL
Match: A0A6J1EHW0 (dof zinc finger protein DOF5.6-like OS=Cucurbita moschata OX=3662 GN=LOC111433543 PE=4 SV=1)

HSP 1 Score: 489 bits (1259), Expect = 1.11e-174
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0


Query: 1   MQRGRDDQDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW 60
           MQRGRDDQDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW
Sbjct: 1   MQRGRDDQDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW 60

Query: 61  THGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG 120
           THGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG
Sbjct: 61  THGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG 120

Query: 121 TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEIIYEMMDQSSGKAAVSSSSQA 180
           TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEIIYEMMDQSSGKAAVSSSSQA
Sbjct: 121 TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEIIYEMMDQSSGKAAVSSSSQA 180

Query: 181 GWSESYINNYISNPIAAAAGENIVWTPNNNNNNNTAMAATGNPTNNSTTINQWPDYMAGF 240
           GWSESYINNYISNPIAAAAGENIVWTPNNNNNNNTAMAATGNPTNNSTTINQWPDYMAGF
Sbjct: 181 GWSESYINNYISNPIAAAAGENIVWTPNNNNNNNTAMAATGNPTNNSTTINQWPDYMAGF 240

Query: 241 DPPP 244
           DPPP
Sbjct: 241 DPPP 244

[Close]

BLAST of Csor.00g114860 vs. ExPASy TrEMBL
Match: A0A6J1KP01 (dof zinc finger protein DOF5.6-like OS=Cucurbita maxima OX=3661 GN=LOC111496983 PE=4 SV=1)

HSP 1 Score: 455 bits (1170), Expect = 3.81e-161
Identity = 229/244 (93.85%), Postives = 234/244 (95.90%), Query Frame = 0


Query: 1   MQRGRDDQDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW 60
           MQRGRDDQDRRLKALQ QNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW
Sbjct: 1   MQRGRDDQDRRLKALQPQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW 60

Query: 61  THGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG 120
           T GGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG
Sbjct: 61  TQGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG 120

Query: 121 TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEIIYEMMDQSSGKAAVSSSSQA 180
           TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPE+IYE+MDQSSGKAAVSSSSQA
Sbjct: 121 TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEVIYEIMDQSSGKAAVSSSSQA 180

Query: 181 GWSESYINNYISNPIAAAAGENIVWTPNNNNNNNTAMAATGNPTNNSTTINQWPDYMAGF 240
           GWSESYINNYISNP+AAA GEN+VWTPNNNNN +T     GNPTNNSTTINQWPDYM GF
Sbjct: 181 GWSESYINNYISNPMAAA-GENLVWTPNNNNN-DTPTTTAGNPTNNSTTINQWPDYMKGF 240

Query: 241 DPPP 244
           DPPP
Sbjct: 241 DPPP 242

[Close]

BLAST of Csor.00g114860 vs. ExPASy TrEMBL
Match: A0A0A0KLH8 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517940 PE=4 SV=1)

HSP 1 Score: 304 bits (778), Expect = 1.63e-101
Identity = 178/245 (72.65%), Postives = 190/245 (77.55%), Query Frame = 0


Query: 8   QDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLR 67
           QDRRLK++Q Q+Q QPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLR
Sbjct: 4   QDRRLKSVQVQDQVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLR 63

Query: 68  NVPVGGGCRKGKRPKQSSHSSDNSNSQPLPS-----LPLPQIVQSSL-TTTPPPVIFSGT 127
           NVPVGGGCRKGKR KQ S SS+NS+ +PL       LP PQIV  SL TTT   VI+SGT
Sbjct: 64  NVPVGGGCRKGKRLKQPSQSSNNSSVKPLVQTSASPLPPPQIVPLSLSTTTSQHVIYSGT 123

Query: 128 PVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEIIYEMMDQSSGKA-AVSSSSQA 187
           PVITP SFFN  GEL SSSSW++SFGSS      Q PEIIY+MMDQSSGKA A SSS  A
Sbjct: 124 PVITPPSFFNSGGELLSSSSWISSFGSSS-----QGPEIIYDMMDQSSGKADANSSSPAA 183

Query: 188 GWSESYINNY-ISNPIAAAAGENIVWTPNNNNNNNTAMAATGNPTNNSTTINQWPDYMAG 244
           GWSESYINN  ISNPIAA  G+ +VW P   NNN T  AAT   T N  TINQWPDYM G
Sbjct: 184 GWSESYINNNSISNPIAAT-GDAVVW-PAGENNNATLAAAT---TTNIATINQWPDYMPG 238

[Close]

BLAST of Csor.00g114860 vs. ExPASy TrEMBL
Match: A0A5A7UGN7 (Dof zinc finger protein DOF1.4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007560 PE=4 SV=1)

HSP 1 Score: 302 bits (773), Expect = 1.00e-100
Identity = 177/248 (71.37%), Postives = 189/248 (76.21%), Query Frame = 0


Query: 8   QDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLR 67
           QDRRLK++Q Q+Q QPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLR
Sbjct: 4   QDRRLKSVQVQDQVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLR 63

Query: 68  NVPVGGGCRKGKRPKQSSHSSDNSNS--------QPLPSLPLPQIVQSSL-TTTPPPVIF 127
           NVPVGGGCRKGKR KQSS SS+N++S           P LP PQIV  SL TTT   VIF
Sbjct: 64  NVPVGGGCRKGKRLKQSSQSSNNNSSVKSSLVQTSASPVLPPPQIVPLSLSTTTSQHVIF 123

Query: 128 SGTPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEIIYEMMDQSSGKA-AVSSS 187
           SGTPVITP SFFN  GEL SSSSW+NSFGSS      Q PEIIY+MMDQSSGKA A SSS
Sbjct: 124 SGTPVITPPSFFNSGGELLSSSSWINSFGSSS-----QGPEIIYDMMDQSSGKADANSSS 183

Query: 188 SQAGWSESYINNY-ISNPIAAAAGENIVWTPNNNNNNNTAMAATGNPTNNSTTINQWPDY 244
             AGWSESYINN  ISNP+AA  G+ +VW    NN   T  AAT   T N+ TINQWPDY
Sbjct: 184 PAAGWSESYINNNSISNPMAAT-GDAVVWPAGENN--ATLAAAT---TTNNATINQWPDY 240

[Close]

BLAST of Csor.00g114860 vs. ExPASy TrEMBL
Match: A0A1S3B0F1 (dof zinc finger protein DOF1.4-like OS=Cucumis melo OX=3656 GN=LOC103484513 PE=4 SV=1)

HSP 1 Score: 301 bits (771), Expect = 2.02e-100
Identity = 176/248 (70.97%), Postives = 188/248 (75.81%), Query Frame = 0


Query: 8   QDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLR 67
           QDRRLK++Q Q+Q QPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLR
Sbjct: 4   QDRRLKSVQVQDQVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLR 63

Query: 68  NVPVGGGCRKGKRPKQSSHSSDNSNS--------QPLPSLPLPQIVQSSL-TTTPPPVIF 127
           NVPVGGGCRKGKR KQSS SS+N++S           P LP PQIV  SL TTT   VIF
Sbjct: 64  NVPVGGGCRKGKRLKQSSQSSNNNSSVKSSLVQTSASPVLPPPQIVPLSLSTTTSQHVIF 123

Query: 128 SGTPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEIIYEMMDQSSGKA-AVSSS 187
           SGTPVITP SFFN  GEL SSSSW+NSFGSS      Q PEIIY+MMDQSSGKA A SSS
Sbjct: 124 SGTPVITPPSFFNSGGELLSSSSWINSFGSSS-----QGPEIIYDMMDQSSGKADANSSS 183

Query: 188 SQAGWSESYINNY-ISNPIAAAAGENIVWTPNNNNNNNTAMAATGNPTNNSTTINQWPDY 244
             AGWSESYINN  ISNP+AA  G+ +VW    NN    A  A    TNN+T INQWPDY
Sbjct: 184 PAAGWSESYINNNSISNPMAAT-GDAVVWPAGENN----ATLAAATSTNNAT-INQWPDY 240

[Close]

BLAST of Csor.00g114860 vs. TAIR 10
Match: AT5G60850.1 (OBF binding protein 4 )

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-26
Identity = 56/87 (64.37%), Postives = 63/87 (72.41%), Query Frame = 0


Query: 9   DRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLRN 68
           DRR++A Q       Q  KCPRC+SLNTKFCYYNNY+LSQPR+ CK CRRYWT GG LRN
Sbjct: 34  DRRMRAHQNNILNHHQSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRN 93

Query: 69  VPVGGGCRKGKRPKQSSHSSDNSNSQP 96
           VPVGGGCRK KR K     S +S  +P
Sbjct: 94  VPVGGGCRKAKRSKTKQVPSSSSADKP 120

[Close]

BLAST of Csor.00g114860 vs. TAIR 10
Match: AT1G28310.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 115.2 bits (287), Expect = 7.6e-26
Identity = 55/79 (69.62%), Postives = 61/79 (77.22%), Query Frame = 0


Query: 16 QAQNQAQPQPQ-KCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLRNVPVGGG 75
          Q Q   QPQPQ KCPRCDS NTKFCYYNNYSLSQPR+ CK C+RYWT GGTLRNVPVGG 
Sbjct: 16 QQQQPQQPQPQLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGS 75

Query: 76 CRKGKRPKQSSHSSDNSNS 94
           RK KR K+ S ++  + S
Sbjct: 76 YRKNKRVKRPSTATTTTAS 94

[Close]

BLAST of Csor.00g114860 vs. TAIR 10
Match: AT1G28310.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 115.2 bits (287), Expect = 7.6e-26
Identity = 55/79 (69.62%), Postives = 61/79 (77.22%), Query Frame = 0


Query: 16  QAQNQAQPQPQ-KCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLRNVPVGGG 75
           Q Q   QPQPQ KCPRCDS NTKFCYYNNYSLSQPR+ CK C+RYWT GGTLRNVPVGG 
Sbjct: 30  QQQQPQQPQPQLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGS 89

Query: 76  CRKGKRPKQSSHSSDNSNS 94
            RK KR K+ S ++  + S
Sbjct: 90  YRKNKRVKRPSTATTTTAS 108

[Close]

BLAST of Csor.00g114860 vs. TAIR 10
Match: AT2G37590.1 (DNA binding with one finger 2.4 )

HSP 1 Score: 114.4 bits (285), Expect = 1.3e-25
Identity = 50/81 (61.73%), Postives = 63/81 (77.78%), Query Frame = 0


Query: 13  KALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLRNVPVG 72
           +A QA         KCPRC+S NTKFCY+NNYSL+QPR+ CKTCRRYWT GG LRNVPVG
Sbjct: 76  RARQANVALPEAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVG 135

Query: 73  GGCRKGKRPKQSSHSSDNSNS 94
           GGCR+ +R K +S++++NS +
Sbjct: 136 GGCRRNRRTKSNSNNNNNSTA 156

[Close]

BLAST of Csor.00g114860 vs. TAIR 10
Match: AT4G00940.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 113.6 bits (283), Expect = 2.2e-25
Identity = 58/109 (53.21%), Postives = 79/109 (72.48%), Query Frame = 0


Query: 6   DDQDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGT 65
           DD+ + +  +  + Q   +P+ CPRC+S NTKFCYYNNYSL+QPRYLCK+CRRYWT GG+
Sbjct: 51  DDEKKLMTTMSTRPQ---EPRNCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGS 110

Query: 66  LRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPP 115
           LRNVPVGGG RK K+     +SS +S+++ LP L  P +  SS +++ P
Sbjct: 111 LRNVPVGGGSRKNKK-LPFPNSSTSSSTKNLPDLNPPFVFTSSASSSNP 155

The following BLAST results are available for this feature:

BLAST of Csor.00g114860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LDR0	1.7e-25	64.37	Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana OX=3702 GN=DOF5.4 PE=2 SV...	[more]
O24463	1.7e-25	47.29	Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1	[more]
Q9FZA4	1.1e-24	69.62	Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana OX=3702 GN=DOF1.4 PE=2 SV...	[more]
O80928	1.8e-24	61.73	Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana OX=3702 GN=DOF2.4 PE=2 SV...	[more]
Q9M161	3.1e-24	53.21	Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana OX=3702 GN=DOF4.1 PE=2 SV...	[more]

BLAST of Csor.00g114860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926378.1	2.29e-174	100.00	dof zinc finger protein DOF5.6-like [Cucurbita moschata] >KAG6594596.1 Dof zinc ...	[more]
KAG7026567.1	2.88e-170	98.77	Dof zinc finger protein DOF5.4, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_023003351.1	7.87e-161	93.85	dof zinc finger protein DOF5.6-like [Cucurbita maxima]	[more]
XP_023517464.1	7.03e-156	92.62	dof zinc finger protein DOF5.6-like [Cucurbita pepo subsp. pepo]	[more]
XP_038882844.1	2.09e-111	74.58	dof zinc finger protein DOF1.4-like [Benincasa hispida]	[more]

BLAST of Csor.00g114860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EHW0	1.11e-174	100.00	dof zinc finger protein DOF5.6-like OS=Cucurbita moschata OX=3662 GN=LOC11143354...	[more]
A0A6J1KP01	3.81e-161	93.85	dof zinc finger protein DOF5.6-like OS=Cucurbita maxima OX=3661 GN=LOC111496983 ...	[more]
A0A0A0KLH8	1.63e-101	72.65	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517940 PE...	[more]
A0A5A7UGN7	1.00e-100	71.37	Dof zinc finger protein DOF1.4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3B0F1	2.02e-100	70.97	dof zinc finger protein DOF1.4-like OS=Cucumis melo OX=3656 GN=LOC103484513 PE=4...	[more]

BLAST of Csor.00g114860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60850.1	1.2e-26	64.37	OBF binding protein 4	[more]
AT1G28310.1	7.6e-26	69.62	Dof-type zinc finger DNA-binding family protein	[more]
AT1G28310.2	7.6e-26	69.62	Dof-type zinc finger DNA-binding family protein	[more]
AT2G37590.1	1.3e-25	61.73	DNA binding with one finger 2.4	[more]
AT4G00940.1	2.2e-25	53.21	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 25..80 e-value: 1.7E-32 score: 111.3
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 28..64
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 26..80 score: 28.490532
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..101
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 14..142
None	No IPR available	PANTHER	PTHR31992:SF108	DOF ZINC FINGER PROTEIN DOF5.4-LIKE ISOFORM X1	coord: 14..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g114860.m01	Csor.00g114860.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding