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Csor.00g114750 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATACCGCAACAATGGTCGTCGCCTTGTGGAAACCAATGCACGCAGAAATACGCAGCCCTCACCAAGATTCCATGTACGACCTTCTTCATCTCCCATTTTTACAGCATTTTCTCTCTTCGCCCTTCCTACAATTGCTATATATTTTTCGCAAATGTTCGGTTTCTTGTTTTGATTTCGTTAGCCATGTCCTAAAATGGTTGCGATTTGCTTTGTTAGCTGTGAAACCTTCTTAATGTTTAGCTGGAAACTCACGTCGATGTACATCCGTGTTCTATTACTCGTCGATTGCAAAACATTACGGTGAATCGTTGAATTCCCTGCGTCTGATTGGTTCATTAGTTGTTTTATTAGACATGATTTTTCCTGGAAATAGTATTTTGATGAAACTGTTGACGGGAAATGCCCCCATTTGTTCAAGTAAACGATTGTCGAAGGATATACTTTAATCCCATGTTTCGTATCGGAAATTTGAGATTGTATGAATTGTATTTGTGATATGGATTTTGGGCGTCCTGTCAGGATGCTAATCTATTTGACTTTGGCAGCGAATAGTGTTTACTTACGAACGAAGATGGTTGGTTTCTTGTGGGATCCTTTGGAATCTGATACTAAGATGACGCCATTATAATAGCTGACAGGGAGATTATAACATTAGTTTTGTTTATGTCTGAATTTGGGTAGTCTGATAATACTTGTTGTGCATATTCTCAATGGTTTGAATGTAGGGCGGGTATTTTGCAAAAAGGGGTGTGATGCTGATGGAGATGCCTGGGAAGAATGTAAGTGATATTCTTTCCTTCTTCTTTCTCTTCTTTCATGTCTTCAGTTCACTATAAGTATTTTCTAGATGTGATTTTCATGGTTTTTGTGAGATCCCACATCGGTTGGAGAGGGGAATGAAGCATTCCTTCTAAGGGTGTGGAAACCTCTCTCTAGTATATGCGTTTTAAAACCGTGAGGCGGATGGCGATACGTTATAGGCAAAAACGGACAACATGTGCTAGCGGTGGGCTTGAGCCAACCAATGGTATCAGAGCCAGACACTGGGTGTTTTGATAGCGAGGACGCTGGCCCCCAAGAGAGGTGGATTTTGAGATCTCACATTGGTTGGAGAGGGGAACGAAACATTCCTTACAAGGGTATGGAAACCTCTCCCTAGCAAACACGTTTTAACCGTGAGGCTGACGGTGATGCGTAATAGGCCAAAACTGACAATATCTGCTAGCGGTAGGCTTGGGCTGTTATAGTTTCTTACTTGCAAGTTAGAACATACAATCTGAGATTTTCATGGTCATGTTCTAGTTTCTACTAGTGACTCGTCATTATATCCGAATGCTCTGTTGGTTAGCTTCCTTAGATGTGAATTCTAGGCACTGTGTTTAGCAATGTTGAATTTGCCTACAGCTTTCTTTAGTTAATTTCAGCAACACGTATGTATAGACGAAAGTTATTTGTCCAGACAATATTTTTTCTGCTTCCATTTTGATTTTCCAATGCATTGAAACAATGGACAGAAGTGTCAGAATGTCTCTCCAAACCCTCAAGCTAATAGCATGTTGGTTTTTGTCTGGTTTTTCTGTTTTGTTGGTCTTTGCAAGACCTATATCTGGTCGTGGAGTTTAATCATGACCTTGATATATAAACTGTAACTCTAAATATTAGTTGTTGGTGTTGTTGAATCTTAAGGCTTGGAGGAATGCACTGAGATATGCTATAAGGATCCTGTATTCAAGGACCACCAGTGGAGTGCTTACATTGACCGATCTCCTGGGTCTGCCAGTTACTCAGAGGTACTTAATCAACATGGTGTTACTTTCCAGAATTTCTTACTCTGATGATGATTTCGACGTCTATCAAGTTTAGACTATTCACGTGCAACGTTTAACTACCCGTCTATGGATTCCCACCCTGCTCCGACATTTGTGAACTTGGAAGATATTAAGTTAATTCATATTTGTTTCAGCCAATGTTTTCGTTTTACTTTCTTTTCGATCTGACTCTTTGCTGCTCACAGGAATGTTTTCATGCATGTGCATCTGGTTGCGGCTTTAAGGTTTGTCTGTTCTTATTAGTATTAAGCTTCTGATAACTTTTACACGCATCCAGCGAAAAGTAGTTGTGTGAAGTCCAAGTTGGGTGAAGTCCTTTGGTATCACGTATCAAATTGTCATAGGGATGAAGAACTCTCAACAATTTCTAATGTTCTTGATGTAGTTTTAGTTGACTTGATGCCATTTCTTTTCATGATCAGTTTGATGTCGATTCTGGGACAGCTGACAAAATTCAAGCAAACAGGCCCGTGAAACCAGTGCCTATTGTTTCGAAACCAGCGCCACGACCTCCAATCACTGAACCTGTTGCCAAAAATGAAGATTTACCAAGCACTTCTGCATAGCAACACAAAATGCAGATAAATGAGGAAGCCTGCCTCAAGAAAATTATAGTCAGTCAGCTAGGTTCTAGTTTTCTTGTAACCTCTTAACGTTCTCTGAAATCGATCTAACCAGCAACCTCAATTCGAATGCAGGCTTACGTCTACTGTTGCTATCTTCTCCAACGCACGAGCTTCATTATTCTGTTGGGTTATATATTACGACACTCGCTGGATCGTGCAATCCTTGTGTGA ATGATACCGCAACAATGGTCGTCGCCTTGTGGAAACCAATGCACGCAGAAATACGCAGCCCTCACCAAGATTCCATGGCGGGTATTTTGCAAAAAGGGGTGTGATGCTGATGGAGATGCCTGGGAAGAATGCTTGGAGGAATGCACTGAGATATGCTATAAGGATCCTGTATTCAAGGACCACCAGTGGAGTGCTTACATTGACCGATCTCCTGGGTCTGCCAGTTACTCAGAGGAATGTTTTCATGCATGTGCATCTGGTTGCGGCTTTAAGTTTGATGTCGATTCTGGGACAGCTGACAAAATTCAAGCAAACAGGCCCGTGAAACCAGTGCCTATTATAAATGAGGAAGCCTGCCTCAAGAAAATTATAGCTTACGTCTACTGTTGCTATCTTCTCCAACGCACGAGCTTCATTATTCTGTTGGGTTATATATTACGACACTCGCTGGATCGTGCAATCCTTGTGTGA ATGATACCGCAACAATGGTCGTCGCCTTGTGGAAACCAATGCACGCAGAAATACGCAGCCCTCACCAAGATTCCATGGCGGGTATTTTGCAAAAAGGGGTGTGATGCTGATGGAGATGCCTGGGAAGAATGCTTGGAGGAATGCACTGAGATATGCTATAAGGATCCTGTATTCAAGGACCACCAGTGGAGTGCTTACATTGACCGATCTCCTGGGTCTGCCAGTTACTCAGAGGAATGTTTTCATGCATGTGCATCTGGTTGCGGCTTTAAGTTTGATGTCGATTCTGGGACAGCTGACAAAATTCAAGCAAACAGGCCCGTGAAACCAGTGCCTATTATAAATGAGGAAGCCTGCCTCAAGAAAATTATAGCTTACGTCTACTGTTGCTATCTTCTCCAACGCACGAGCTTCATTATTCTGTTGGGTTATATATTACGACACTCGCTGGATCGTGCAATCCTTGTGTGA MIPQQWSSPCGNQCTQKYAALTKIPWRVFCKKGCDADGDAWEECLEECTEICYKDPVFKDHQWSAYIDRSPGSASYSEECFHACASGCGFKFDVDSGTADKIQANRPVKPVPIINEEACLKKIIAYVYCCYLLQRTSFIILLGYILRHSLDRAILV Homology
BLAST of Csor.00g114750 vs. NCBI nr
Match: KAG6594607.1 (hypothetical protein SDJN03_11160, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 337 bits (863), Expect = 6.56e-117 Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0
BLAST of Csor.00g114750 vs. NCBI nr
Match: XP_022926758.1 (uncharacterized protein LOC111433786 [Cucurbita moschata] >XP_023003188.1 uncharacterized protein LOC111496877 [Cucurbita maxima] >XP_023518775.1 uncharacterized protein LOC111782187 [Cucurbita pepo subsp. pepo] >XP_023518776.1 uncharacterized protein LOC111782187 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 261 bits (666), Expect = 3.93e-87 Identity = 114/118 (96.61%), Postives = 117/118 (99.15%), Query Frame = 0
BLAST of Csor.00g114750 vs. NCBI nr
Match: XP_038883449.1 (uncharacterized protein LOC120074406 isoform X1 [Benincasa hispida] >XP_038883450.1 uncharacterized protein LOC120074406 isoform X1 [Benincasa hispida]) HSP 1 Score: 241 bits (615), Expect = 2.42e-79 Identity = 102/116 (87.93%), Postives = 110/116 (94.83%), Query Frame = 0
BLAST of Csor.00g114750 vs. NCBI nr
Match: XP_004134712.1 (uncharacterized protein LOC101206260 [Cucumis sativus] >KAE8647688.1 hypothetical protein Csa_003744 [Cucumis sativus]) HSP 1 Score: 237 bits (604), Expect = 1.15e-77 Identity = 99/116 (85.34%), Postives = 109/116 (93.97%), Query Frame = 0
BLAST of Csor.00g114750 vs. NCBI nr
Match: XP_022142369.1 (uncharacterized protein LOC111012509 [Momordica charantia] >XP_022142370.1 uncharacterized protein LOC111012509 [Momordica charantia] >XP_022142371.1 uncharacterized protein LOC111012509 [Momordica charantia]) HSP 1 Score: 234 bits (597), Expect = 1.34e-76 Identity = 99/114 (86.84%), Postives = 106/114 (92.98%), Query Frame = 0
BLAST of Csor.00g114750 vs. ExPASy TrEMBL
Match: A0A6J1KVS0 (uncharacterized protein LOC111496877 OS=Cucurbita maxima OX=3661 GN=LOC111496877 PE=4 SV=1) HSP 1 Score: 261 bits (666), Expect = 1.90e-87 Identity = 114/118 (96.61%), Postives = 117/118 (99.15%), Query Frame = 0
BLAST of Csor.00g114750 vs. ExPASy TrEMBL
Match: A0A6J1EJ45 (uncharacterized protein LOC111433786 OS=Cucurbita moschata OX=3662 GN=LOC111433786 PE=4 SV=1) HSP 1 Score: 261 bits (666), Expect = 1.90e-87 Identity = 114/118 (96.61%), Postives = 117/118 (99.15%), Query Frame = 0
BLAST of Csor.00g114750 vs. ExPASy TrEMBL
Match: A0A6J1CKR8 (uncharacterized protein LOC111012509 OS=Momordica charantia OX=3673 GN=LOC111012509 PE=4 SV=1) HSP 1 Score: 234 bits (597), Expect = 6.48e-77 Identity = 99/114 (86.84%), Postives = 106/114 (92.98%), Query Frame = 0
BLAST of Csor.00g114750 vs. ExPASy TrEMBL
Match: A0A1S3AZC9 (uncharacterized protein LOC103484528 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484528 PE=4 SV=1) HSP 1 Score: 235 bits (599), Expect = 1.54e-76 Identity = 98/116 (84.48%), Postives = 109/116 (93.97%), Query Frame = 0
BLAST of Csor.00g114750 vs. ExPASy TrEMBL
Match: A0A5N6QAL0 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_000430 PE=4 SV=1) HSP 1 Score: 218 bits (554), Expect = 2.02e-70 Identity = 90/112 (80.36%), Postives = 99/112 (88.39%), Query Frame = 0
BLAST of Csor.00g114750 vs. TAIR 10
Match: AT4G21720.1 (unknown protein; Has 2692 Blast hits to 975 proteins in 186 species: Archae - 4; Bacteria - 460; Metazoa - 658; Fungi - 93; Plants - 1089; Viruses - 100; Other Eukaryotes - 288 (source: NCBI BLink). ) HSP 1 Score: 186.8 bits (473), Expect = 1.3e-47 Identity = 73/112 (65.18%), Postives = 92/112 (82.14%), Query Frame = 0
BLAST of Csor.00g114750 vs. TAIR 10
Match: AT4G21720.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf whorl, sepal, male gametophyte, root, flower; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage. ) HSP 1 Score: 102.1 bits (253), Expect = 4.3e-22 Identity = 41/66 (62.12%), Postives = 51/66 (77.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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