Csor.00g114240 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g114240
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr07: 1413174 .. 1413497 (+)
RNA-Seq ExpressionCsor.00g114240
SyntenyCsor.00g114240
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTTTGTTCTTGTTAAGAGGTCTAATGGTTACTCCAAGGTTGATAAAGAAGACCCAGATGAGATAATTCATCGAAGAGCACAGTTTATAATCAACAAAGTGTTGGAACGAGCAGATTCCATGGGCAAAGCTTCGTATCTGAGAATTAGAATCCGAAGACTAAGAGTTAGATTTGGAAGAAGATTGAAGAAGCTGAAGAAGAGTATTTGCAATGTCAAGATTAGTGTTTACAAGCAAATAATCTGTCAGATCAGAAACTGCAAGTCTTTGTTTGGCAGAAAAGCAACCAACTTCGCCAATCTACCTCCTCTCTTACCATAA

mRNA sequence

ATGAGTTTTGTTCTTGTTAAGAGGTCTAATGGTTACTCCAAGGTTGATAAAGAAGACCCAGATGAGATAATTCATCGAAGAGCACAGTTTATAATCAACAAAGTGTTGGAACGAGCAGATTCCATGGGCAAAGCTTCGTATCTGAGAATTAGAATCCGAAGACTAAGAGTTAGATTTGGAAGAAGATTGAAGAAGCTGAAGAAGAGTATTTGCAATGTCAAGATTAGTGTTTACAAGCAAATAATCTGTCAGATCAGAAACTGCAAGTCTTTGTTTGGCAGAAAAGCAACCAACTTCGCCAATCTACCTCCTCTCTTACCATAA

Coding sequence (CDS)

ATGAGTTTTGTTCTTGTTAAGAGGTCTAATGGTTACTCCAAGGTTGATAAAGAAGACCCAGATGAGATAATTCATCGAAGAGCACAGTTTATAATCAACAAAGTGTTGGAACGAGCAGATTCCATGGGCAAAGCTTCGTATCTGAGAATTAGAATCCGAAGACTAAGAGTTAGATTTGGAAGAAGATTGAAGAAGCTGAAGAAGAGTATTTGCAATGTCAAGATTAGTGTTTACAAGCAAATAATCTGTCAGATCAGAAACTGCAAGTCTTTGTTTGGCAGAAAAGCAACCAACTTCGCCAATCTACCTCCTCTCTTACCATAA

Protein sequence

MSFVLVKRSNGYSKVDKEDPDEIIHRRAQFIINKVLERADSMGKASYLRIRIRRLRVRFGRRLKKLKKSICNVKISVYKQIICQIRNCKSLFGRKATNFANLPPLLP
Homology
BLAST of Csor.00g114240 vs. NCBI nr
Match: KAG6594658.1 (hypothetical protein SDJN03_11211, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 210 bits (535), Expect = 1.82e-68
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0

Query: 1   MSFVLVKRSNGYSKVDKEDPDEIIHRRAQFIINKVLERADSMGKASYLRIRIRRLRVRFG 60
           MSFVLVKRSNGYSKVDKEDPDEIIHRRAQFIINKVLERADSMGKASYLRIRIRRLRVRFG
Sbjct: 1   MSFVLVKRSNGYSKVDKEDPDEIIHRRAQFIINKVLERADSMGKASYLRIRIRRLRVRFG 60

Query: 61  RRLKKLKKSICNVKISVYKQIICQIRNCKSLFGRKATNFANLPPLLP 107
           RRLKKLKKSICNVKISVYKQIICQIRNCKSLFGRKATNFANLPPLLP
Sbjct: 61  RRLKKLKKSICNVKISVYKQIICQIRNCKSLFGRKATNFANLPPLLP 107

BLAST of Csor.00g114240 vs. NCBI nr
Match: KAG7026625.1 (hypothetical protein SDJN02_10627, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 209 bits (532), Expect = 5.23e-68
Identity = 106/107 (99.07%), Postives = 107/107 (100.00%), Query Frame = 0

Query: 1   MSFVLVKRSNGYSKVDKEDPDEIIHRRAQFIINKVLERADSMGKASYLRIRIRRLRVRFG 60
           MSFVLVKRSNGYSKVDKEDPDEIIHRRAQFIIN+VLERADSMGKASYLRIRIRRLRVRFG
Sbjct: 1   MSFVLVKRSNGYSKVDKEDPDEIIHRRAQFIINRVLERADSMGKASYLRIRIRRLRVRFG 60

Query: 61  RRLKKLKKSICNVKISVYKQIICQIRNCKSLFGRKATNFANLPPLLP 107
           RRLKKLKKSICNVKISVYKQIICQIRNCKSLFGRKATNFANLPPLLP
Sbjct: 61  RRLKKLKKSICNVKISVYKQIICQIRNCKSLFGRKATNFANLPPLLP 107

BLAST of Csor.00g114240 vs. NCBI nr
Match: XP_023003962.1 (uncharacterized protein LOC111497408 [Cucurbita maxima])

HSP 1 Score: 196 bits (498), Expect = 9.44e-63
Identity = 103/110 (93.64%), Postives = 104/110 (94.55%), Query Frame = 0

Query: 1   MSFVLVKRSNGYSKVDKEDPDEIIHRRAQFIINKVLERADSMGKASYLRIRIRRLRVRFG 60
           MSFVLVK SNGYSKVDKEDP+EIIHRRAQFIINKVLERADSMGKASYLRIRIRRLRVRFG
Sbjct: 1   MSFVLVKSSNGYSKVDKEDPEEIIHRRAQFIINKVLERADSMGKASYLRIRIRRLRVRFG 60

Query: 61  RRLKKLKKS----ICNVKISVYKQIICQIRNCKSLFGRKATNFANLPPLL 106
           RRLKKLKKS    ICNVKISVYKQIICQIRNCKSLFGRK TNFANLPPLL
Sbjct: 61  RRLKKLKKSAMASICNVKISVYKQIICQIRNCKSLFGRKETNFANLPPLL 110

BLAST of Csor.00g114240 vs. NCBI nr
Match: KGN49119.1 (hypothetical protein Csa_003853 [Cucumis sativus])

HSP 1 Score: 169 bits (429), Expect = 3.14e-52
Identity = 89/110 (80.91%), Postives = 95/110 (86.36%), Query Frame = 0

Query: 1   MSFVLVKRSNGYSKVDKEDPDEIIHRRAQFIINKVLERADSMGKASYLRIRIRRLRVRFG 60
           MS VL KRSNGY KVDKEDP+EIIHRRAQF+INKVLERADSMGK SYLRIRIRRL+VRFG
Sbjct: 1   MSLVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFG 60

Query: 61  RRLKKLKKS----ICNVKISVYKQIICQIRNCKSLFGRKATNFANLPPLL 106
           RRLK+LKKS    I  +KI VYKQ+I QIRNCKSLFGRK TNFAN P LL
Sbjct: 61  RRLKRLKKSAMGSISTLKIGVYKQVITQIRNCKSLFGRKQTNFANFPVLL 110

BLAST of Csor.00g114240 vs. NCBI nr
Match: XP_038883675.1 (uncharacterized protein LOC120074584 [Benincasa hispida])

HSP 1 Score: 166 bits (420), Expect = 7.39e-51
Identity = 87/110 (79.09%), Postives = 95/110 (86.36%), Query Frame = 0

Query: 1   MSFVLVKRSNGYSKVDKEDPDEIIHRRAQFIINKVLERADSMGKASYLRIRIRRLRVRFG 60
           MSFVL++R NGYSKVDKEDP+EIIHRRAQF+INKVLERADSMGK SYLRIRIRRL+VRFG
Sbjct: 1   MSFVLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFG 60

Query: 61  RRLKKLKKS----ICNVKISVYKQIICQIRNCKSLFGRKATNFANLPPLL 106
           RRLKKLKKS    I  +KI VYKQ+I QIRNCKSLFG K T+F N P LL
Sbjct: 61  RRLKKLKKSAMASISTLKIGVYKQVISQIRNCKSLFGPKQTHFPNFPLLL 110

BLAST of Csor.00g114240 vs. ExPASy TrEMBL
Match: A0A6J1KP23 (uncharacterized protein LOC111497408 OS=Cucurbita maxima OX=3661 GN=LOC111497408 PE=4 SV=1)

HSP 1 Score: 196 bits (498), Expect = 4.57e-63
Identity = 103/110 (93.64%), Postives = 104/110 (94.55%), Query Frame = 0

Query: 1   MSFVLVKRSNGYSKVDKEDPDEIIHRRAQFIINKVLERADSMGKASYLRIRIRRLRVRFG 60
           MSFVLVK SNGYSKVDKEDP+EIIHRRAQFIINKVLERADSMGKASYLRIRIRRLRVRFG
Sbjct: 1   MSFVLVKSSNGYSKVDKEDPEEIIHRRAQFIINKVLERADSMGKASYLRIRIRRLRVRFG 60

Query: 61  RRLKKLKKS----ICNVKISVYKQIICQIRNCKSLFGRKATNFANLPPLL 106
           RRLKKLKKS    ICNVKISVYKQIICQIRNCKSLFGRK TNFANLPPLL
Sbjct: 61  RRLKKLKKSAMASICNVKISVYKQIICQIRNCKSLFGRKETNFANLPPLL 110

BLAST of Csor.00g114240 vs. ExPASy TrEMBL
Match: A0A0A0KJX3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G514800 PE=4 SV=1)

HSP 1 Score: 169 bits (429), Expect = 1.52e-52
Identity = 89/110 (80.91%), Postives = 95/110 (86.36%), Query Frame = 0

Query: 1   MSFVLVKRSNGYSKVDKEDPDEIIHRRAQFIINKVLERADSMGKASYLRIRIRRLRVRFG 60
           MS VL KRSNGY KVDKEDP+EIIHRRAQF+INKVLERADSMGK SYLRIRIRRL+VRFG
Sbjct: 1   MSLVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFG 60

Query: 61  RRLKKLKKS----ICNVKISVYKQIICQIRNCKSLFGRKATNFANLPPLL 106
           RRLK+LKKS    I  +KI VYKQ+I QIRNCKSLFGRK TNFAN P LL
Sbjct: 61  RRLKRLKKSAMGSISTLKIGVYKQVITQIRNCKSLFGRKQTNFANFPVLL 110

BLAST of Csor.00g114240 vs. ExPASy TrEMBL
Match: A0A6J1CLW2 (uncharacterized protein LOC111012478 OS=Momordica charantia OX=3673 GN=LOC111012478 PE=4 SV=1)

HSP 1 Score: 161 bits (408), Expect = 2.41e-49
Identity = 84/110 (76.36%), Postives = 93/110 (84.55%), Query Frame = 0

Query: 1   MSFVLVKRSNGYSKVDKEDPDEIIHRRAQFIINKVLERADSMGKASYLRIRIRRLRVRFG 60
           MSF+L++R NGYSKVDKEDP+EIIHRRAQF+INKVLERA+SMGK SYLRIRIRRL+VRFG
Sbjct: 1   MSFLLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERAESMGKPSYLRIRIRRLKVRFG 60

Query: 61  RRLKKLKKS----ICNVKISVYKQIICQIRNCKSLFGRKATNFANLPPLL 106
           RRLKKLKKS    I   KI VYKQ+I Q+RNCKSLFGRK    ANL P L
Sbjct: 61  RRLKKLKKSALASISAAKIGVYKQVIGQLRNCKSLFGRKEATIANLSPFL 110

BLAST of Csor.00g114240 vs. ExPASy TrEMBL
Match: A0A5D3CMA4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006550 PE=4 SV=1)

HSP 1 Score: 160 bits (404), Expect = 9.82e-49
Identity = 85/110 (77.27%), Postives = 92/110 (83.64%), Query Frame = 0

Query: 1   MSFVLVKRSNGYSKVDKEDPDEIIHRRAQFIINKVLERADSMGKASYLRIRIRRLRVRFG 60
           MSFVL KR NGY KVDKEDP+EII RRAQF+INKVLERADSMGK SYLRIRIRRL+VRFG
Sbjct: 1   MSFVLTKRPNGYCKVDKEDPEEIIRRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFG 60

Query: 61  RRLKKLKKS----ICNVKISVYKQIICQIRNCKSLFGRKATNFANLPPLL 106
           +RLKKLKKS    I  +K+ VYKQ+I QIRN KSLFGRK T FAN P LL
Sbjct: 61  KRLKKLKKSAMASISTLKVGVYKQVITQIRNYKSLFGRKQTKFANFPVLL 110

BLAST of Csor.00g114240 vs. ExPASy TrEMBL
Match: A0A1S3B0N9 (uncharacterized protein LOC103484604 OS=Cucumis melo OX=3656 GN=LOC103484604 PE=4 SV=1)

HSP 1 Score: 160 bits (404), Expect = 9.82e-49
Identity = 85/110 (77.27%), Postives = 92/110 (83.64%), Query Frame = 0

Query: 1   MSFVLVKRSNGYSKVDKEDPDEIIHRRAQFIINKVLERADSMGKASYLRIRIRRLRVRFG 60
           MSFVL KR NGY KVDKEDP+EII RRAQF+INKVLERADSMGK SYLRIRIRRL+VRFG
Sbjct: 1   MSFVLTKRPNGYCKVDKEDPEEIIRRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFG 60

Query: 61  RRLKKLKKS----ICNVKISVYKQIICQIRNCKSLFGRKATNFANLPPLL 106
           +RLKKLKKS    I  +K+ VYKQ+I QIRN KSLFGRK T FAN P LL
Sbjct: 61  KRLKKLKKSAMASISTLKVGVYKQVITQIRNYKSLFGRKQTKFANFPVLL 110

BLAST of Csor.00g114240 vs. TAIR 10
Match: AT4G04745.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21902.1); Has 32 Blast hits to 32 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 69.3 bits (168), Expect = 2.1e-12
Identity = 43/106 (40.57%), Postives = 64/106 (60.38%), Query Frame = 0

Query: 12  YSKVDKEDPDEIIHRRAQFIINKVLERADSMGKASYLR---------IRIRRLRVRFGRR 71
           Y+K++KEDP E+IHRRAQF+I KVLERADS  +    R         IR+  +R+R G++
Sbjct: 37  YTKMEKEDPQELIHRRAQFLIQKVLERADSKTRQHQQRRRSSGPLIMIRVVGIRMRIGKK 96

Query: 72  LKKLKKS---ICNVKISVYKQIICQIRNCKSLFGRKATNFANLPPL 106
           L+KL+K+   ICN  I+ + +   +   C S     +   ++LPPL
Sbjct: 97  LRKLRKTNTCICNNLITRFLKSFKRFL-CSSSSSSSSRTISDLPPL 141

BLAST of Csor.00g114240 vs. TAIR 10
Match: AT4G21902.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G04745.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 62.8 bits (151), Expect = 2.0e-10
Identity = 39/112 (34.82%), Postives = 70/112 (62.50%), Query Frame = 0

Query: 5   LVKRSNGYSKVDKEDPDEIIHRRAQFIINKVLERAD------SMGKASYLRI---RIRRL 64
           ++K  N Y+K++KED +EIIHRRAQF+I+K+L+RAD         + + +++   R+  +
Sbjct: 3   MMKNPNQYTKIEKEDLNEIIHRRAQFLIHKILQRADIETLRQQQKRNTTIKLFSFRVVGI 62

Query: 65  RVRFGRRLKKLKKSICNVKIS--VYKQIICQIRNCKSLFGRKATNFANLPPL 106
           R++ G++L+KL+KS   V  +  +  +++  +R  +  F     N +NLPPL
Sbjct: 63  RMKIGKKLRKLRKSCVMVDKNGDLIPRVLKSLR--RYFFCSSPRNDSNLPPL 112

BLAST of Csor.00g114240 vs. TAIR 10
Match: AT1G11655.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21902.1); Has 22 Blast hits to 22 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 62.4 bits (150), Expect = 2.6e-10
Identity = 31/70 (44.29%), Postives = 52/70 (74.29%), Query Frame = 0

Query: 5  LVKRSNGYSKVDKEDPDEIIHRRAQFIINKVLERADSMGK----ASYLRIRIRRLRVRFG 64
          L KR   YSK+DKEDP+E++ RRA+F+I K L+ AD + +    +S++R+++  L+V+ G
Sbjct: 3  LFKRPCLYSKMDKEDPEEVLSRRAKFLIYKTLQEADLISRRDPHSSFIRLKLYLLKVKIG 62

Query: 65 RRLKKLKKSI 71
          +RL KL++S+
Sbjct: 63 KRLAKLRRSV 72

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6594658.11.82e-68100.00hypothetical protein SDJN03_11211, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7026625.15.23e-6899.07hypothetical protein SDJN02_10627, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023003962.19.44e-6393.64uncharacterized protein LOC111497408 [Cucurbita maxima][more]
KGN49119.13.14e-5280.91hypothetical protein Csa_003853 [Cucumis sativus][more]
XP_038883675.17.39e-5179.09uncharacterized protein LOC120074584 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A0A6J1KP234.57e-6393.64uncharacterized protein LOC111497408 OS=Cucurbita maxima OX=3661 GN=LOC111497408... [more]
A0A0A0KJX31.52e-5280.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G514800 PE=4 SV=1[more]
A0A6J1CLW22.41e-4976.36uncharacterized protein LOC111012478 OS=Momordica charantia OX=3673 GN=LOC111012... [more]
A0A5D3CMA49.82e-4977.27Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3B0N99.82e-4977.27uncharacterized protein LOC103484604 OS=Cucumis melo OX=3656 GN=LOC103484604 PE=... [more]
Match NameE-valueIdentityDescription
AT4G04745.12.1e-1240.57unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G21902.12.0e-1034.82unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G11655.12.6e-1044.29unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35687OS07G0516700 PROTEINcoord: 4..103
NoneNo IPR availablePANTHERPTHR35687:SF1OS07G0516700 PROTEINcoord: 4..103

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g114240.m01Csor.00g114240.m01mRNA