Csor.00g114240 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTTTGTTCTTGTTAAGAGGTCTAATGGTTACTCCAAGGTTGATAAAGAAGACCCAGATGAGATAATTCATCGAAGAGCACAGTTTATAATCAACAAAGTGTTGGAACGAGCAGATTCCATGGGCAAAGCTTCGTATCTGAGAATTAGAATCCGAAGACTAAGAGTTAGATTTGGAAGAAGATTGAAGAAGCTGAAGAAGAGTATTTGCAATGTCAAGATTAGTGTTTACAAGCAAATAATCTGTCAGATCAGAAACTGCAAGTCTTTGTTTGGCAGAAAAGCAACCAACTTCGCCAATCTACCTCCTCTCTTACCATAA ATGAGTTTTGTTCTTGTTAAGAGGTCTAATGGTTACTCCAAGGTTGATAAAGAAGACCCAGATGAGATAATTCATCGAAGAGCACAGTTTATAATCAACAAAGTGTTGGAACGAGCAGATTCCATGGGCAAAGCTTCGTATCTGAGAATTAGAATCCGAAGACTAAGAGTTAGATTTGGAAGAAGATTGAAGAAGCTGAAGAAGAGTATTTGCAATGTCAAGATTAGTGTTTACAAGCAAATAATCTGTCAGATCAGAAACTGCAAGTCTTTGTTTGGCAGAAAAGCAACCAACTTCGCCAATCTACCTCCTCTCTTACCATAA ATGAGTTTTGTTCTTGTTAAGAGGTCTAATGGTTACTCCAAGGTTGATAAAGAAGACCCAGATGAGATAATTCATCGAAGAGCACAGTTTATAATCAACAAAGTGTTGGAACGAGCAGATTCCATGGGCAAAGCTTCGTATCTGAGAATTAGAATCCGAAGACTAAGAGTTAGATTTGGAAGAAGATTGAAGAAGCTGAAGAAGAGTATTTGCAATGTCAAGATTAGTGTTTACAAGCAAATAATCTGTCAGATCAGAAACTGCAAGTCTTTGTTTGGCAGAAAAGCAACCAACTTCGCCAATCTACCTCCTCTCTTACCATAA MSFVLVKRSNGYSKVDKEDPDEIIHRRAQFIINKVLERADSMGKASYLRIRIRRLRVRFGRRLKKLKKSICNVKISVYKQIICQIRNCKSLFGRKATNFANLPPLLP Homology
BLAST of Csor.00g114240 vs. NCBI nr
Match: KAG6594658.1 (hypothetical protein SDJN03_11211, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 210 bits (535), Expect = 1.82e-68 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of Csor.00g114240 vs. NCBI nr
Match: KAG7026625.1 (hypothetical protein SDJN02_10627, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 209 bits (532), Expect = 5.23e-68 Identity = 106/107 (99.07%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of Csor.00g114240 vs. NCBI nr
Match: XP_023003962.1 (uncharacterized protein LOC111497408 [Cucurbita maxima]) HSP 1 Score: 196 bits (498), Expect = 9.44e-63 Identity = 103/110 (93.64%), Postives = 104/110 (94.55%), Query Frame = 0
BLAST of Csor.00g114240 vs. NCBI nr
Match: KGN49119.1 (hypothetical protein Csa_003853 [Cucumis sativus]) HSP 1 Score: 169 bits (429), Expect = 3.14e-52 Identity = 89/110 (80.91%), Postives = 95/110 (86.36%), Query Frame = 0
BLAST of Csor.00g114240 vs. NCBI nr
Match: XP_038883675.1 (uncharacterized protein LOC120074584 [Benincasa hispida]) HSP 1 Score: 166 bits (420), Expect = 7.39e-51 Identity = 87/110 (79.09%), Postives = 95/110 (86.36%), Query Frame = 0
BLAST of Csor.00g114240 vs. ExPASy TrEMBL
Match: A0A6J1KP23 (uncharacterized protein LOC111497408 OS=Cucurbita maxima OX=3661 GN=LOC111497408 PE=4 SV=1) HSP 1 Score: 196 bits (498), Expect = 4.57e-63 Identity = 103/110 (93.64%), Postives = 104/110 (94.55%), Query Frame = 0
BLAST of Csor.00g114240 vs. ExPASy TrEMBL
Match: A0A0A0KJX3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G514800 PE=4 SV=1) HSP 1 Score: 169 bits (429), Expect = 1.52e-52 Identity = 89/110 (80.91%), Postives = 95/110 (86.36%), Query Frame = 0
BLAST of Csor.00g114240 vs. ExPASy TrEMBL
Match: A0A6J1CLW2 (uncharacterized protein LOC111012478 OS=Momordica charantia OX=3673 GN=LOC111012478 PE=4 SV=1) HSP 1 Score: 161 bits (408), Expect = 2.41e-49 Identity = 84/110 (76.36%), Postives = 93/110 (84.55%), Query Frame = 0
BLAST of Csor.00g114240 vs. ExPASy TrEMBL
Match: A0A5D3CMA4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006550 PE=4 SV=1) HSP 1 Score: 160 bits (404), Expect = 9.82e-49 Identity = 85/110 (77.27%), Postives = 92/110 (83.64%), Query Frame = 0
BLAST of Csor.00g114240 vs. ExPASy TrEMBL
Match: A0A1S3B0N9 (uncharacterized protein LOC103484604 OS=Cucumis melo OX=3656 GN=LOC103484604 PE=4 SV=1) HSP 1 Score: 160 bits (404), Expect = 9.82e-49 Identity = 85/110 (77.27%), Postives = 92/110 (83.64%), Query Frame = 0
BLAST of Csor.00g114240 vs. TAIR 10
Match: AT4G04745.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21902.1); Has 32 Blast hits to 32 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 69.3 bits (168), Expect = 2.1e-12 Identity = 43/106 (40.57%), Postives = 64/106 (60.38%), Query Frame = 0
BLAST of Csor.00g114240 vs. TAIR 10
Match: AT4G21902.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G04745.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 62.8 bits (151), Expect = 2.0e-10 Identity = 39/112 (34.82%), Postives = 70/112 (62.50%), Query Frame = 0
BLAST of Csor.00g114240 vs. TAIR 10
Match: AT1G11655.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21902.1); Has 22 Blast hits to 22 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 62.4 bits (150), Expect = 2.6e-10 Identity = 31/70 (44.29%), Postives = 52/70 (74.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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