Csor.00g113850 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g113850
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	major latex allergen Hev b 5-like
Location	Csor_Chr07: 1555008 .. 1555794 (+)
RNA-Seq Expression	Csor.00g113850
Synteny	Csor.00g113850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACCGTTGAGGTAATTCAAGCTTTGGGTTCAGTTTTTGTAATATTTGATGCAGATCAAACCCTTTTGAAACCCTTTTAATTTCATATTATATAAATGTTTCTAACTGATCTTGCAATGTGGGATTTGCTGTATTGGTTCGTGTTCTTCAAGCAAAAGAACAAAACAAACGAATGCCAGTGAATACTGTTTGACATGTTTTTTCTTGGATCATCGCAGCTTATAAGCTACTTTTAGTTTTGAATTGATCAATTATGCGATGTGGGTGTTGTAGGTTGATTCAGCCCCTGTAGTACTGCCAGCGGCAGAGGAGCCGGCAGTGGTCGTACCAGAGGAAAAGGCTGTAGAAGAGGCAGTAGCTGTAGCTGAAGAGCCTGCACAAGAACCAAAGGAAGAAGCTGTGGAGGCAAGCAAAAGAAGAAAATATATTTTCTTCCCACTTGGATTACAACTTATAATGAATTGTGCTATCTGGGTGTTGTAGGTTGAATCAACCCCCGTAGAATCGCCGGAGCCTGATGTAGCTGCAGTGCCAGAACCTGAGGAAAAGGGTGTAGAAGAGACAGTAGATGTAGCTGAAGGGTCTGTAGAAGAGGAAGCTGCGAGTGAAGCAGAGGCAGTGGACCCGGCAGCGGTGGCTGAGGTGGAGGAGAAAGAGGCGGAAGCACCGGCGGAGGCGGAAAAGGAGGAGGAGGTAGCAGCAGAGGAAGAGGTGCAGGTGGAGAAAGAGGAGGATGAAGCTGCAGCAGGGAAAGAGGAAGCTGCAGCACCAGCTGAGGAATGA

mRNA sequence

ATGGCCACCGTTGAGGTTGATTCAGCCCCTGTAGTACTGCCAGCGGCAGAGGAGCCGGCAGTGGTCGTACCAGAGGAAAAGGCTGTAGAAGAGGCAGTAGCTGTAGCTGAAGAGCCTGCACAAGAACCAAAGGAAGAAGCTGTGGAGGTTGAATCAACCCCCGTAGAATCGCCGGAGCCTGATGTAGCTGCAGTGCCAGAACCTGAGGAAAAGGGTGTAGAAGAGACAGTAGATGTAGCTGAAGGGTCTGTAGAAGAGGAAGCTGCGAGTGAAGCAGAGGCAGTGGACCCGGCAGCGGTGGCTGAGGTGGAGGAGAAAGAGGCGGAAGCACCGGCGGAGGCGGAAAAGGAGGAGGAGGTAGCAGCAGAGGAAGAGGTGCAGGTGGAGAAAGAGGAGGATGAAGCTGCAGCAGGGAAAGAGGAAGCTGCAGCACCAGCTGAGGAATGA

Coding sequence (CDS)

ATGGCCACCGTTGAGGTTGATTCAGCCCCTGTAGTACTGCCAGCGGCAGAGGAGCCGGCAGTGGTCGTACCAGAGGAAAAGGCTGTAGAAGAGGCAGTAGCTGTAGCTGAAGAGCCTGCACAAGAACCAAAGGAAGAAGCTGTGGAGGTTGAATCAACCCCCGTAGAATCGCCGGAGCCTGATGTAGCTGCAGTGCCAGAACCTGAGGAAAAGGGTGTAGAAGAGACAGTAGATGTAGCTGAAGGGTCTGTAGAAGAGGAAGCTGCGAGTGAAGCAGAGGCAGTGGACCCGGCAGCGGTGGCTGAGGTGGAGGAGAAAGAGGCGGAAGCACCGGCGGAGGCGGAAAAGGAGGAGGAGGTAGCAGCAGAGGAAGAGGTGCAGGTGGAGAAAGAGGAGGATGAAGCTGCAGCAGGGAAAGAGGAAGCTGCAGCACCAGCTGAGGAATGA

Protein sequence

MATVEVDSAPVVLPAAEEPAVVVPEEKAVEEAVAVAEEPAQEPKEEAVEVESTPVESPEPDVAAVPEPEEKGVEETVDVAEGSVEEEAASEAEAVDPAAVAEVEEKEAEAPAEAEKEEEVAAEEEVQVEKEEDEAAAGKEEAAAPAEE

Homology

[Close]

BLAST of Csor.00g113850 vs. NCBI nr
Match: KAG6594696.1 (hypothetical protein SDJN03_11249, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 223 bits (568), Expect = 3.44e-72
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MATVEVDSAPVVLPAAEEPAVVVPEEKAVEEAVAVAEEPAQEPKEEAVEVESTPVESPEP 60
           MATVEVDSAPVVLPAAEEPAVVVPEEKAVEEAVAVAEEPAQEPKEEAVEVESTPVESPEP
Sbjct: 1   MATVEVDSAPVVLPAAEEPAVVVPEEKAVEEAVAVAEEPAQEPKEEAVEVESTPVESPEP 60

Query: 61  DVAAVPEPEEKGVEETVDVAEGSVEEEAASEAEAVDPAAVAEVEEKEAEAPAEAEKEEEV 120
           DVAAVPEPEEKGVEETVDVAEGSVEEEAASEAEAVDPAAVAEVEEKEAEAPAEAEKEEEV
Sbjct: 61  DVAAVPEPEEKGVEETVDVAEGSVEEEAASEAEAVDPAAVAEVEEKEAEAPAEAEKEEEV 120

Query: 121 AAEEEVQVEKEEDEAAAGKEEAAAPAEE 148
           AAEEEVQVEKEEDEAAAGKEEAAAPAEE
Sbjct: 121 AAEEEVQVEKEEDEAAAGKEEAAAPAEE 148

[Close]

BLAST of Csor.00g113850 vs. NCBI nr
Match: XP_023003715.1 (uncharacterized protein LOC111497224 [Cucurbita maxima])

HSP 1 Score: 216 bits (549), Expect = 2.70e-69
Identity = 144/148 (97.30%), Postives = 144/148 (97.30%), Query Frame = 0


Query: 1   MATVEVDSAPVVLPAAEEPAVVVPEEKAVEEAVAVAEEPAQEPKEEAVEVESTPVESPEP 60
           MATVEVDSAPVVLP AEEPAVVVPEEKAVEEAVAVAEEPAQEPKEEAVEVESTPVESPEP
Sbjct: 1   MATVEVDSAPVVLPVAEEPAVVVPEEKAVEEAVAVAEEPAQEPKEEAVEVESTPVESPEP 60

Query: 61  DVAAVPEPEEKGVEETVDVAEGSVEEEAASEAEAVDPAAVAEVEEKEAEAPAEAEKEEEV 120
           DVAAVPEPEEKGVEETVDVAEGSVEEEAASEAEAVDPAAVAEVEEKEAEAPAEAEKEEEV
Sbjct: 61  DVAAVPEPEEKGVEETVDVAEGSVEEEAASEAEAVDPAAVAEVEEKEAEAPAEAEKEEEV 120

Query: 121 AAEEEVQVEKEEDEAAAGKEEAAAPAEE 148
           A EEEVQVEKEE EA AGKEEAAAPAEE
Sbjct: 121 ATEEEVQVEKEEGEAGAGKEEAAAPAEE 148

[Close]

BLAST of Csor.00g113850 vs. NCBI nr
Match: XP_023518011.1 (uncharacterized protein LOC111781574 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 200 bits (509), Expect = 2.74e-63
Identity = 138/148 (93.24%), Postives = 138/148 (93.24%), Query Frame = 0


Query: 1   MATVEVDSAPVVLPAAEEPAVVVPEEKAVEEAVAVAEEPAQEPKEEAVEVESTPVESPEP 60
           MATVEVDSAPVVLP AEEPAVVVPEEKAVEEAVAVAEEPAQEPKEEAVEVESTPVESPEP
Sbjct: 1   MATVEVDSAPVVLPVAEEPAVVVPEEKAVEEAVAVAEEPAQEPKEEAVEVESTPVESPEP 60

Query: 61  DVAAVPEPEEKGVEETVDVAEGSVEEEAASEAEAVDPAAVAEVEEKEAEAPAEAEKEEEV 120
           DVAAVPEPEEKGVEETVDVAEGSVEEEAASEAEAVDPAAVAEVEEKEAE      KEEEV
Sbjct: 61  DVAAVPEPEEKGVEETVDVAEGSVEEEAASEAEAVDPAAVAEVEEKEAE------KEEEV 120

Query: 121 AAEEEVQVEKEEDEAAAGKEEAAAPAEE 148
           AAEEEVQVEKEE EA AG EEAAAPAEE
Sbjct: 121 AAEEEVQVEKEEGEAGAGNEEAAAPAEE 142

[Close]

BLAST of Csor.00g113850 vs. NCBI nr
Match: XP_022926632.1 (uncharacterized protein LOC111433708 [Cucurbita moschata])

HSP 1 Score: 197 bits (502), Expect = 3.19e-62
Identity = 137/148 (92.57%), Postives = 138/148 (93.24%), Query Frame = 0


Query: 1   MATVEVDSAPVVLPAAEEPAVVVPEEKAVEEAVAVAEEPAQEPKEEAVEVESTPVESPEP 60
           MATVEVDSAPVVLPAAEEPAVVVPEEKAVEEAVAVAEEPAQEPK EAVEVESTPVESPEP
Sbjct: 1   MATVEVDSAPVVLPAAEEPAVVVPEEKAVEEAVAVAEEPAQEPKGEAVEVESTPVESPEP 60

Query: 61  DVAAVPEPEEKGVEETVDVAEGSVEEEAASEAEAVDPAAVAEVEEKEAEAPAEAEKEEEV 120
           DVAAVPEPEEKGVEETVDVAEGSVEEEAASEAEAVDPAAVAEVEEKEAE      K+EEV
Sbjct: 61  DVAAVPEPEEKGVEETVDVAEGSVEEEAASEAEAVDPAAVAEVEEKEAE------KKEEV 120

Query: 121 AAEEEVQVEKEEDEAAAGKEEAAAPAEE 148
           AAEEEVQVEKEE EAA GKEEA APAEE
Sbjct: 121 AAEEEVQVEKEEGEAAEGKEEAGAPAEE 142

[Close]

BLAST of Csor.00g113850 vs. NCBI nr
Match: XP_022979119.1 (major latex allergen Hev b 5-like [Cucurbita maxima])

HSP 1 Score: 56.2 bits (134), Expect = 1.31e-06
Identity = 76/151 (50.33%), Postives = 88/151 (58.28%), Query Frame = 0


Query: 1   MATVEVDSAPVVLPAAEEPAVVVPEEKAVEEAVAVAEEPAQEPKEEAVEVESTPVESPEP 60
           MAT+EV+SAPVVLP  E   VV  EEK  EEAV+ A  PA+EPKEE    E+   E P P
Sbjct: 1   MATIEVESAPVVLPEPEAAPVVQAEEKVAEEAVSEA-APAEEPKEEEAASEAVETEEPAP 60

Query: 61  DVAAVPEPEEKGVEETVDVAEGSVEEE--AASEAEAVDPAAVAEVEEKEAEAPAEAEKEE 120
            VA  PE E K V   V+ A  +VE E  AA+ A A +P A AE EEK+ E   E E+  
Sbjct: 61  -VATEPEVETKEV--VVEEAAEAVEAEPAAAAAAAASEPEAAAEAEEKKEETKEETEEPV 120

Query: 121 -EVAAEEEVQVEKEEDEAAAGKEEAAAPAEE 148
            E   EEE Q  K E+      EEAAAPAEE
Sbjct: 121 VEKKEEEEPQEVKAEETVEESSEEAAAPAEE 147

[Close]

BLAST of Csor.00g113850 vs. ExPASy TrEMBL
Match: A0A6J1KSK7 (uncharacterized protein LOC111497224 OS=Cucurbita maxima OX=3661 GN=LOC111497224 PE=4 SV=1)

HSP 1 Score: 216 bits (549), Expect = 1.31e-69
Identity = 144/148 (97.30%), Postives = 144/148 (97.30%), Query Frame = 0


Query: 1   MATVEVDSAPVVLPAAEEPAVVVPEEKAVEEAVAVAEEPAQEPKEEAVEVESTPVESPEP 60
           MATVEVDSAPVVLP AEEPAVVVPEEKAVEEAVAVAEEPAQEPKEEAVEVESTPVESPEP
Sbjct: 1   MATVEVDSAPVVLPVAEEPAVVVPEEKAVEEAVAVAEEPAQEPKEEAVEVESTPVESPEP 60

Query: 61  DVAAVPEPEEKGVEETVDVAEGSVEEEAASEAEAVDPAAVAEVEEKEAEAPAEAEKEEEV 120
           DVAAVPEPEEKGVEETVDVAEGSVEEEAASEAEAVDPAAVAEVEEKEAEAPAEAEKEEEV
Sbjct: 61  DVAAVPEPEEKGVEETVDVAEGSVEEEAASEAEAVDPAAVAEVEEKEAEAPAEAEKEEEV 120

Query: 121 AAEEEVQVEKEEDEAAAGKEEAAAPAEE 148
           A EEEVQVEKEE EA AGKEEAAAPAEE
Sbjct: 121 ATEEEVQVEKEEGEAGAGKEEAAAPAEE 148

[Close]

BLAST of Csor.00g113850 vs. ExPASy TrEMBL
Match: A0A6J1EEX4 (uncharacterized protein LOC111433708 OS=Cucurbita moschata OX=3662 GN=LOC111433708 PE=4 SV=1)

HSP 1 Score: 197 bits (502), Expect = 1.54e-62
Identity = 137/148 (92.57%), Postives = 138/148 (93.24%), Query Frame = 0


Query: 1   MATVEVDSAPVVLPAAEEPAVVVPEEKAVEEAVAVAEEPAQEPKEEAVEVESTPVESPEP 60
           MATVEVDSAPVVLPAAEEPAVVVPEEKAVEEAVAVAEEPAQEPK EAVEVESTPVESPEP
Sbjct: 1   MATVEVDSAPVVLPAAEEPAVVVPEEKAVEEAVAVAEEPAQEPKGEAVEVESTPVESPEP 60

Query: 61  DVAAVPEPEEKGVEETVDVAEGSVEEEAASEAEAVDPAAVAEVEEKEAEAPAEAEKEEEV 120
           DVAAVPEPEEKGVEETVDVAEGSVEEEAASEAEAVDPAAVAEVEEKEAE      K+EEV
Sbjct: 61  DVAAVPEPEEKGVEETVDVAEGSVEEEAASEAEAVDPAAVAEVEEKEAE------KKEEV 120

Query: 121 AAEEEVQVEKEEDEAAAGKEEAAAPAEE 148
           AAEEEVQVEKEE EAA GKEEA APAEE
Sbjct: 121 AAEEEVQVEKEEGEAAEGKEEAGAPAEE 142

[Close]

BLAST of Csor.00g113850 vs. ExPASy TrEMBL
Match: A0A6J1IVT4 (major latex allergen Hev b 5-like OS=Cucurbita maxima OX=3661 GN=LOC111478851 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 6.32e-07
Identity = 76/151 (50.33%), Postives = 88/151 (58.28%), Query Frame = 0


Query: 1   MATVEVDSAPVVLPAAEEPAVVVPEEKAVEEAVAVAEEPAQEPKEEAVEVESTPVESPEP 60
           MAT+EV+SAPVVLP  E   VV  EEK  EEAV+ A  PA+EPKEE    E+   E P P
Sbjct: 1   MATIEVESAPVVLPEPEAAPVVQAEEKVAEEAVSEA-APAEEPKEEEAASEAVETEEPAP 60

Query: 61  DVAAVPEPEEKGVEETVDVAEGSVEEE--AASEAEAVDPAAVAEVEEKEAEAPAEAEKEE 120
            VA  PE E K V   V+ A  +VE E  AA+ A A +P A AE EEK+ E   E E+  
Sbjct: 61  -VATEPEVETKEV--VVEEAAEAVEAEPAAAAAAAASEPEAAAEAEEKKEETKEETEEPV 120

Query: 121 -EVAAEEEVQVEKEEDEAAAGKEEAAAPAEE 148
            E   EEE Q  K E+      EEAAAPAEE
Sbjct: 121 VEKKEEEEPQEVKAEETVEESSEEAAAPAEE 147

[Close]

BLAST of Csor.00g113850 vs. ExPASy TrEMBL
Match: A0A6J1GG70 (major latex allergen Hev b 5-like OS=Cucurbita moschata OX=3662 GN=LOC111453630 PE=4 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 6.72e-05
Identity = 79/159 (49.69%), Postives = 89/159 (55.97%), Query Frame = 0


Query: 1   MATVEVDSAPVVLPAAEEPAVVVPEEKAVEEAVAVAEEPAQEPKEEAVEVESTPVESPEP 60
           MAT+EV+SAPVVL   E   VV  EEK  EEAV+ A  PA+E KEE    E+   E P P
Sbjct: 1   MATIEVESAPVVLAEPEAAPVVQAEEKVAEEAVSEA-APAEEAKEEEAASEAVETEEPAP 60

Query: 61  DVAAVPEPEEKGVEETVDVAEGSVEEEAASEAEAVDPAAVAEVEEK------EAEAPAEA 120
            VAA PE E K V     V E +VE E A+ A A +P A AE EEK      E E P   
Sbjct: 61  -VAAEPEVETKEV-----VVEEAVEAEPAAAA-ASEPEAAAEAEEKKEETKEETEEPVVE 120

Query: 121 EKEEE-----VAAEEEVQVEKEEDEAAAGKEEAAAPAEE 148
           +KEEE     V AEE V+   E  EAAA    AAAPAEE
Sbjct: 121 KKEEEEEPQEVKAEETVE---ESSEAAAAAAAAAAPAEE 148

[Close]

BLAST of Csor.00g113850 vs. ExPASy TrEMBL
Match: A0A5D3CMF4 (Fibrous sheath CABYR-binding protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005990 PE=4 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.17e-04
Identity = 77/158 (48.73%), Postives = 88/158 (55.70%), Query Frame = 0


Query: 1   MATVEVDSAPVVLPAAEEPAVVVPEEKAVEEAVAVAEEPAQEPKEEAVEVESTPVESPEP 60
           MAT+EV+SAPVVLP  E    V PEEK VEE VA  E PAQE KEEA         +PEP
Sbjct: 1   MATIEVESAPVVLPEPEAAPAVQPEEKVVEEPVA-EETPAQEQKEEA---------APEP 60

Query: 61  DVAAVPEPEEKGVEETVDVAEGSVEEEAASEAEAVDPAAVAEVEEKEAEAPAEAEKEEEV 120
            V  V +P     E  V+  E  VEE+  S+ E  +PAA     E EA A AEAEK+EE 
Sbjct: 61  -VEEVEKPAPVETEPVVETKEDVVEEKE-SKPEEAEPAA-----EPEAPAEAEAEKKEEE 120

Query: 121 AAEEEVQV--EKEEDEAAAGKEE--------AAAPAEE 148
             EE V+   EK E+EA   K E        AAAPAEE
Sbjct: 121 TKEETVEAVEEKAEEEAKEVKSEEVVEESSEAAAPAEE 141

The following BLAST results are available for this feature:

BLAST of Csor.00g113850 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g113850 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6594696.1	3.44e-72	100.00	hypothetical protein SDJN03_11249, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023003715.1	2.70e-69	97.30	uncharacterized protein LOC111497224 [Cucurbita maxima]	[more]
XP_023518011.1	2.74e-63	93.24	uncharacterized protein LOC111781574 [Cucurbita pepo subsp. pepo]	[more]
XP_022926632.1	3.19e-62	92.57	uncharacterized protein LOC111433708 [Cucurbita moschata]	[more]
XP_022979119.1	1.31e-06	50.33	major latex allergen Hev b 5-like [Cucurbita maxima]	[more]

BLAST of Csor.00g113850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KSK7	1.31e-69	97.30	uncharacterized protein LOC111497224 OS=Cucurbita maxima OX=3661 GN=LOC111497224...	[more]
A0A6J1EEX4	1.54e-62	92.57	uncharacterized protein LOC111433708 OS=Cucurbita moschata OX=3662 GN=LOC1114337...	[more]
A0A6J1IVT4	6.32e-07	50.33	major latex allergen Hev b 5-like OS=Cucurbita maxima OX=3661 GN=LOC111478851 PE...	[more]
A0A6J1GG70	6.72e-05	49.69	major latex allergen Hev b 5-like OS=Cucurbita moschata OX=3662 GN=LOC111453630 ...	[more]
A0A5D3CMF4	1.17e-04	48.73	Fibrous sheath CABYR-binding protein-like OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of Csor.00g113850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 112..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g113850.m01	Csor.00g113850.m01	mRNA