Csor.00g113770 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g113770
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr07: 1589415 .. 1589693 (+)
RNA-Seq ExpressionCsor.00g113770
SyntenyCsor.00g113770
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTTAAAATGGCTGCTTCATTCAACAAGTTGCCTTCTCGGGAACCCGATCGAGGTCCCGATAAGCTCACAAGGGAAAAGGGGTTGTGAAGAAATATGCAATTCTGGGTTTCAAATGCCTCTTCATTACCCTCGTTACAACAAGGCCGATTACCAGAAGATGGAGGACTGGAAGGTGGATCTGCTTCTCAAGGAATATGGCTTGAGTTTTCATGGCAGTTTGGAGGAGAAGAGGGCCTTTGCAATGGGGGCGTTTACATGGCCTGATCAGAATTAA

mRNA sequence

ATGCCTTTAAAATGGCTGCTTCATTCAACAAGTTGCCTTCTCGGGAACCCGATCGAGGTCCCGATAAGCTCACAAGGGAAAAGGGGTTGTGAAGAAATATGCAATTCTGGGTTTCAAATGCCTCTTCATTACCCTCGTTACAACAAGGCCGATTACCAGAAGATGGAGGACTGGAAGGTGGATCTGCTTCTCAAGGAATATGGCTTGAGTTTTCATGGCAGTTTGGAGGAGAAGAGGGCCTTTGCAATGGGGGCGTTTACATGGCCTGATCAGAATTAA

Coding sequence (CDS)

ATGCCTTTAAAATGGCTGCTTCATTCAACAAGTTGCCTTCTCGGGAACCCGATCGAGGTCCCGATAAGCTCACAAGGGAAAAGGGGTTGTGAAGAAATATGCAATTCTGGGTTTCAAATGCCTCTTCATTACCCTCGTTACAACAAGGCCGATTACCAGAAGATGGAGGACTGGAAGGTGGATCTGCTTCTCAAGGAATATGGCTTGAGTTTTCATGGCAGTTTGGAGGAGAAGAGGGCCTTTGCAATGGGGGCGTTTACATGGCCTGATCAGAATTAA

Protein sequence

MPLKWLLHSTSCLLGNPIEVPISSQGKRGCEEICNSGFQMPLHYPRYNKADYQKMEDWKVDLLLKEYGLSFHGSLEEKRAFAMGAFTWPDQN
Homology
BLAST of Csor.00g113770 vs. NCBI nr
Match: KAG6594704.1 (hypothetical protein SDJN03_11257, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026671.1 hypothetical protein SDJN02_10674, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 203 bits (517), Expect = 3.39e-66
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0

Query: 1  MPLKWLLHSTSCLLGNPIEVPISSQGKRGCEEICNSGFQMPLHYPRYNKADYQKMEDWKV 60
          MPLKWLLHSTSCLLGNPIEVPISSQGKRGCEEICNSGFQMPLHYPRYNKADYQKMEDWKV
Sbjct: 1  MPLKWLLHSTSCLLGNPIEVPISSQGKRGCEEICNSGFQMPLHYPRYNKADYQKMEDWKV 60

Query: 61 DLLLKEYGLSFHGSLEEKRAFAMGAFTWPDQN 92
          DLLLKEYGLSFHGSLEEKRAFAMGAFTWPDQN
Sbjct: 61 DLLLKEYGLSFHGSLEEKRAFAMGAFTWPDQN 92

BLAST of Csor.00g113770 vs. NCBI nr
Match: XP_038882557.1 (uncharacterized protein LOC120073788 [Benincasa hispida])

HSP 1 Score: 160 bits (406), Expect = 3.22e-49
Identity = 76/94 (80.85%), Postives = 81/94 (86.17%), Query Frame = 0

Query: 1  MPLKWLLHSTSCLLGNPIEV---PISSQGKRGCEEICNSGFQMPLHYPRYNKADYQKMED 60
          M L+WLLHSTS LLGNPIE      SS+GK G EEIC SGFQMPLHYPRYNKADYQKME+
Sbjct: 1  MALRWLLHSTSYLLGNPIEARGEESSSKGKNGYEEICTSGFQMPLHYPRYNKADYQKMEE 60

Query: 61 WKVDLLLKEYGLSFHGSLEEKRAFAMGAFTWPDQ 91
          WK+DLLLKEYGLSF GSLEEKRAFA+GAF WPDQ
Sbjct: 61 WKLDLLLKEYGLSFQGSLEEKRAFAIGAFLWPDQ 94

BLAST of Csor.00g113770 vs. NCBI nr
Match: TYK12988.1 (uncharacterized protein E5676_scaffold255G005850 [Cucumis melo var. makuwa])

HSP 1 Score: 154 bits (390), Expect = 9.44e-47
Identity = 74/96 (77.08%), Postives = 78/96 (81.25%), Query Frame = 0

Query: 1  MPLKWLLHSTSCLLGNPIEVPI-----SSQGKRGCEEICNSGFQMPLHYPRYNKADYQKM 60
          M L+WLLHSTS LLGNP E        SS GK+G EEICNSGFQMPLHYPRY K+DYQ M
Sbjct: 1  MDLRWLLHSTSYLLGNPNEAHAYGEERSSTGKKGYEEICNSGFQMPLHYPRYKKSDYQNM 60

Query: 61 EDWKVDLLLKEYGLSFHGSLEEKRAFAMGAFTWPDQ 91
          E WK+DLLLKEYGLSF GSLEEKRAFAMGAF WPDQ
Sbjct: 61 EGWKLDLLLKEYGLSFQGSLEEKRAFAMGAFIWPDQ 96

BLAST of Csor.00g113770 vs. NCBI nr
Match: XP_011658113.1 (uncharacterized protein LOC105435946 [Cucumis sativus] >KGN49041.1 hypothetical protein Csa_003579 [Cucumis sativus])

HSP 1 Score: 153 bits (386), Expect = 3.84e-46
Identity = 73/97 (75.26%), Postives = 80/97 (82.47%), Query Frame = 0

Query: 1  MPLKWLLHSTSCLLGNPIEVPI-----SSQGKRGCEEICNSGFQMPLHYPRYNKADYQKM 60
          M L+ LLHS S LLGNP E        SS+GK+G EE+CNSGFQMPLHYPRY K+DYQKM
Sbjct: 1  MDLRGLLHSVSYLLGNPNEAHAYGEERSSKGKKGYEELCNSGFQMPLHYPRYKKSDYQKM 60

Query: 61 EDWKVDLLLKEYGLSFHGSLEEKRAFAMGAFTWPDQN 92
          E+WK+DLLLKEYGLSF GSLEEKRAFAMGAF WPDQN
Sbjct: 61 EEWKLDLLLKEYGLSFEGSLEEKRAFAMGAFLWPDQN 97

BLAST of Csor.00g113770 vs. NCBI nr
Match: KAG6603827.1 (hypothetical protein SDJN03_04436, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034009.1 hypothetical protein SDJN02_03735, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 142 bits (357), Expect = 1.08e-41
Identity = 72/98 (73.47%), Postives = 79/98 (80.61%), Query Frame = 0

Query: 1  MPLKWLLHSTSCLLGNPI-EV-----PISSQGKRGCEEIC-NSGFQMPLHYPRYNKADYQ 60
          M L WLL+S + LLGNP  EV       SS+G++GCEEIC +SGFQMPLHYP Y KADYQ
Sbjct: 1  MALGWLLYSAARLLGNPNHEVHGYGEERSSKGEKGCEEICTSSGFQMPLHYPHYTKADYQ 60

Query: 61 KMEDWKVDLLLKEYGLSFHGSLEEKRAFAMGAFTWPDQ 91
          KME+WKVD LLKEYGLSF GSLEEKRAFAMGAF WPDQ
Sbjct: 61 KMEEWKVDQLLKEYGLSFQGSLEEKRAFAMGAFLWPDQ 98

BLAST of Csor.00g113770 vs. ExPASy TrEMBL
Match: A0A5D3CP92 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005850 PE=4 SV=1)

HSP 1 Score: 154 bits (390), Expect = 4.57e-47
Identity = 74/96 (77.08%), Postives = 78/96 (81.25%), Query Frame = 0

Query: 1  MPLKWLLHSTSCLLGNPIEVPI-----SSQGKRGCEEICNSGFQMPLHYPRYNKADYQKM 60
          M L+WLLHSTS LLGNP E        SS GK+G EEICNSGFQMPLHYPRY K+DYQ M
Sbjct: 1  MDLRWLLHSTSYLLGNPNEAHAYGEERSSTGKKGYEEICNSGFQMPLHYPRYKKSDYQNM 60

Query: 61 EDWKVDLLLKEYGLSFHGSLEEKRAFAMGAFTWPDQ 91
          E WK+DLLLKEYGLSF GSLEEKRAFAMGAF WPDQ
Sbjct: 61 EGWKLDLLLKEYGLSFQGSLEEKRAFAMGAFIWPDQ 96

BLAST of Csor.00g113770 vs. ExPASy TrEMBL
Match: A0A0A0KMW8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511080 PE=4 SV=1)

HSP 1 Score: 153 bits (386), Expect = 1.86e-46
Identity = 73/97 (75.26%), Postives = 80/97 (82.47%), Query Frame = 0

Query: 1  MPLKWLLHSTSCLLGNPIEVPI-----SSQGKRGCEEICNSGFQMPLHYPRYNKADYQKM 60
          M L+ LLHS S LLGNP E        SS+GK+G EE+CNSGFQMPLHYPRY K+DYQKM
Sbjct: 1  MDLRGLLHSVSYLLGNPNEAHAYGEERSSKGKKGYEELCNSGFQMPLHYPRYKKSDYQKM 60

Query: 61 EDWKVDLLLKEYGLSFHGSLEEKRAFAMGAFTWPDQN 92
          E+WK+DLLLKEYGLSF GSLEEKRAFAMGAF WPDQN
Sbjct: 61 EEWKLDLLLKEYGLSFEGSLEEKRAFAMGAFLWPDQN 97

BLAST of Csor.00g113770 vs. ExPASy TrEMBL
Match: A0A6J1BUU9 (uncharacterized protein LOC111005569 OS=Momordica charantia OX=3673 GN=LOC111005569 PE=4 SV=1)

HSP 1 Score: 139 bits (350), Expect = 7.54e-41
Identity = 68/104 (65.38%), Postives = 77/104 (74.04%), Query Frame = 0

Query: 1   MPLKWLLHSTSCLLGNPIEVPISS-----------QGKRGCEEICNS--GFQMPLHYPRY 60
           M LKWLLHS +C L N +    +            +GK+GCEEICNS  GFQMPLHYPRY
Sbjct: 3   MALKWLLHS-ACYLLNEVHACANGGVKTSDEERIPKGKKGCEEICNSASGFQMPLHYPRY 62

Query: 61  NKADYQKMEDWKVDLLLKEYGLSFHGSLEEKRAFAMGAFTWPDQ 91
           NKADYQKME+W+VDLLL +YG+ F GSLEEKRAFAMGAF WPDQ
Sbjct: 63  NKADYQKMEEWEVDLLLNQYGMGFEGSLEEKRAFAMGAFLWPDQ 105

BLAST of Csor.00g113770 vs. ExPASy TrEMBL
Match: A0A7J0EYW1 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_08g0000310 PE=4 SV=1)

HSP 1 Score: 124 bits (311), Expect = 6.80e-35
Identity = 60/106 (56.60%), Postives = 72/106 (67.92%), Query Frame = 0

Query: 1   MPLKWLLHST-SCLLGNPIEVPISSQGKR--------------GCEEICNSGFQMPLHYP 60
           M L+WLLHS  + +LG P E  +  Q K                C ++C SGFQMPLHYP
Sbjct: 1   MALRWLLHSAYAIVLGYPNEAAVQKQVKSLTFQSDQNLPKSAGTCVQMCCSGFQMPLHYP 60

Query: 61  RYNKADYQKMEDWKVDLLLKEYGLSFHGSLEEKRAFAMGAFTWPDQ 91
           RY KADY+KME+WKVD++L+EYGL F GSL+EKRAFAMG F WPDQ
Sbjct: 61  RYKKADYEKMEEWKVDMVLQEYGLRFMGSLDEKRAFAMGVFLWPDQ 106

BLAST of Csor.00g113770 vs. ExPASy TrEMBL
Match: A0A2N9EZP3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8195 PE=4 SV=1)

HSP 1 Score: 122 bits (306), Expect = 3.19e-34
Identity = 58/99 (58.59%), Postives = 70/99 (70.71%), Query Frame = 0

Query: 1  MPLKWLLHSTSCLLGNPIEVPISSQ--------GKRGCEEICNSGFQMPLHYPRYNKADY 60
          M L WL+HS   +LG P +  I           G    +E+  SGFQMPLHYPRYNKADY
Sbjct: 1  MALSWLIHSACHVLGTPKDTNIQCHVKSLKVPNGGLPSKEMNPSGFQMPLHYPRYNKADY 60

Query: 61 QKMEDWKVDLLLKEYGLSFHGSLEEKRAFAMGAFTWPDQ 91
          +KME+WKVDLLLK+YGL+F G+L+EKRA+AMGAF WP Q
Sbjct: 61 EKMEEWKVDLLLKQYGLNFKGNLDEKRAYAMGAFLWPGQ 99

BLAST of Csor.00g113770 vs. TAIR 10
Match: AT5G55620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 90.9 bits (224), Expect = 5.8e-19
Identity = 37/56 (66.07%), Postives = 49/56 (87.50%), Query Frame = 0

Query: 36  SGFQMPLHYPRYNKADYQKMEDWKVDLLLKEYGLSFHGSLEEKRAFAMGAFTWPDQ 92
           SGFQ+PLHYP+Y+K+DY+ M+D ++DLLLK+YG SF GSLE+KR FA+ +F WPDQ
Sbjct: 45  SGFQVPLHYPKYSKSDYEVMDDLRLDLLLKQYGFSFEGSLEDKRVFAIESFLWPDQ 100

BLAST of Csor.00g113770 vs. TAIR 10
Match: AT3G09950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 87.4 bits (215), Expect = 6.4e-18
Identity = 39/70 (55.71%), Postives = 52/70 (74.29%), Query Frame = 0

Query: 22 ISSQGKRGCEEICNSGFQMPLHYPRYNKADYQKMEDWKVDLLLKEYG-LSFH-GSLEEKR 81
          + +  K G  +  +SGF+MPLHYPRY K DY++ME+W++DLLL EYG L+FH  +L EKR
Sbjct: 20 VENLDKNGAVKAPSSGFKMPLHYPRYTKEDYEEMEEWRLDLLLSEYGLLAFHDNTLHEKR 79

Query: 82 AFAMGAFTWP 90
          AFA+  F WP
Sbjct: 80 AFAIDTFIWP 89

BLAST of Csor.00g113770 vs. TAIR 10
Match: AT5G41761.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 80.9 bits (198), Expect = 6.0e-16
Identity = 33/58 (56.90%), Postives = 44/58 (75.86%), Query Frame = 0

Query: 35 NSGFQMPLHYPRYNKADYQKMEDWKVDLLLKEYGLSFHGSLEEKRAFAMGAFTWPDQN 93
          +S FQ+PLHYP+Y K+DY+KM +W++D LL+EYGL   G   EKR FA+GAF W  +N
Sbjct: 42 SSSFQIPLHYPKYTKSDYEKMPEWQLDRLLREYGLPVIGDSYEKRKFAIGAFLWSSEN 99

BLAST of Csor.00g113770 vs. TAIR 10
Match: AT3G55570.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 78.2 bits (191), Expect = 3.9e-15
Identity = 33/53 (62.26%), Postives = 41/53 (77.36%), Query Frame = 0

Query: 36 SGFQMPLHYPRYNKADYQKMEDWKVDLLLKEYGLSFHGSLEEKRAFAMGAFTW 89
          S F+MPLHYPRY+K DYQ M +WK+D +L +YGLS +G L  KR FA+GAF W
Sbjct: 30 SVFRMPLHYPRYSKEDYQDMPEWKLDRVLADYGLSTYGDLAHKRDFAIGAFLW 82

BLAST of Csor.00g113770 vs. TAIR 10
Match: AT3G11405.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 55.5 bits (132), Expect = 2.7e-08
Identity = 28/54 (51.85%), Postives = 34/54 (62.96%), Query Frame = 0

Query: 36  SGFQMPLHYPRYNKADYQKMEDWKVDLLLKEYGLSFH-GSLEEKRAFAMGAFTW 89
           S FQMPL YP Y K  Y  M + ++D LLK YGL    G+L  K+ FA+GAF W
Sbjct: 55  SSFQMPLQYPNYAKEQYDIMSEEELDRLLKLYGLPTDIGNLSCKKEFAVGAFLW 108

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6594704.13.39e-66100.00hypothetical protein SDJN03_11257, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_038882557.13.22e-4980.85uncharacterized protein LOC120073788 [Benincasa hispida][more]
TYK12988.19.44e-4777.08uncharacterized protein E5676_scaffold255G005850 [Cucumis melo var. makuwa][more]
XP_011658113.13.84e-4675.26uncharacterized protein LOC105435946 [Cucumis sativus] >KGN49041.1 hypothetical ... [more]
KAG6603827.11.08e-4173.47hypothetical protein SDJN03_04436, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A5D3CP924.57e-4777.08Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KMW81.86e-4675.26Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511080 PE=4 SV=1[more]
A0A6J1BUU97.54e-4165.38uncharacterized protein LOC111005569 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A7J0EYW16.80e-3556.60Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_08g0000310 PE=4 SV=1[more]
A0A2N9EZP33.19e-3458.59Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8195 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G55620.15.8e-1966.07unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G09950.16.4e-1855.71unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G41761.16.0e-1656.90unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G55570.13.9e-1562.26unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G11405.12.7e-0851.85unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33513:SF2SUBFAMILY NOT NAMEDcoord: 25..91
NoneNo IPR availablePANTHERPTHR33513OS06G0523300 PROTEINcoord: 25..91

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g113770.m01Csor.00g113770.m01mRNA