Csor.00g113680 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g113680
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr07: 1620707 .. 1621015 (-)
RNA-Seq ExpressionCsor.00g113680
SyntenyCsor.00g113680
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCCCCCCACTAACTCCGCTGATTTTTCTTCCATCGATTGTTGGTTGGTTCTTCTCGATCTGCATGTCGGCCACGTGTCGCCGGCTGTATCACTCTTCTTTTTGTTGGTGGTTTCGGTGGCTAATCGCAGACAACTCTCTTCTTTCTTTCAACTTGTGTCGCCTAATTTCTCCATGCGCGAGCGGGACTGCCGCTCCACTGCCGCTGCCGTGCATTTCCCGGCGGCGGCGTTCACTTCCGATTCGAGCAGTAGCTTCGTGCAGAATGAATCCTTTTCATCGTCTTTCTTACAATTTCATCATTGA

mRNA sequence

ATGATTCCCCCCACTAACTCCGCTGATTTTTCTTCCATCGATTGTTGGTTGGTTCTTCTCGATCTGCATGTCGGCCACGTGTCGCCGGCTGTATCACTCTTCTTTTTGTTGGTGGTTTCGGTGGCTAATCGCAGACAACTCTCTTCTTTCTTTCAACTTGTGTCGCCTAATTTCTCCATGCGCGAGCGGGACTGCCGCTCCACTGCCGCTGCCGTGCATTTCCCGGCGGCGGCGTTCACTTCCGATTCGAGCAGTAGCTTCGTGCAGAATGAATCCTTTTCATCGTCTTTCTTACAATTTCATCATTGA

Coding sequence (CDS)

ATGATTCCCCCCACTAACTCCGCTGATTTTTCTTCCATCGATTGTTGGTTGGTTCTTCTCGATCTGCATGTCGGCCACGTGTCGCCGGCTGTATCACTCTTCTTTTTGTTGGTGGTTTCGGTGGCTAATCGCAGACAACTCTCTTCTTTCTTTCAACTTGTGTCGCCTAATTTCTCCATGCGCGAGCGGGACTGCCGCTCCACTGCCGCTGCCGTGCATTTCCCGGCGGCGGCGTTCACTTCCGATTCGAGCAGTAGCTTCGTGCAGAATGAATCCTTTTCATCGTCTTTCTTACAATTTCATCATTGA

Protein sequence

MIPPTNSADFSSIDCWLVLLDLHVGHVSPAVSLFFLLVVSVANRRQLSSFFQLVSPNFSMRERDCRSTAAAVHFPAAAFTSDSSSSFVQNESFSSSFLQFHH
Homology
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BLAST of Csor.00g113680 vs. NCBI nr
Match: KAG6594713.1 (hypothetical protein SDJN03_11266, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 195 bits (496), Expect = 1.13e-62
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MIPPTNSADFSSIDCWLVLLDLHVGHVSPAVSLFFLLVVSVANRRQLSSFFQLVSPNFSM 60
           MIPPTNSADFSSIDCWLVLLDLHVGHVSPAVSLFFLLVVSVANRRQLSSFFQLVSPNFSM
Sbjct: 1   MIPPTNSADFSSIDCWLVLLDLHVGHVSPAVSLFFLLVVSVANRRQLSSFFQLVSPNFSM 60

Query: 61  RERDCRSTAAAVHFPAAAFTSDSSSSFVQNESFSSSFLQFHH 102
           RERDCRSTAAAVHFPAAAFTSDSSSSFVQNESFSSSFLQFHH
Sbjct: 61  RERDCRSTAAAVHFPAAAFTSDSSSSFVQNESFSSSFLQFHH 102

The following BLAST results are available for this feature:
BLAST of Csor.00g113680 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g113680 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6594713.11.13e-62100.00hypothetical protein SDJN03_11266, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g113680 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g113680 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g113680.m01Csor.00g113680.m01mRNA