Csor.00g113010 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g113010
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Zinc finger protein
Location	Csor_Chr07: 1943933 .. 1947177 (-)
RNA-Seq Expression	Csor.00g113010
Synteny	Csor.00g113010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGGAGTGAAGGAGGGGATAGAAAGAAAAGCAGCGTCACAAGTAGCAGTAATGGGCGAAGGAAAAGAAGGCGATTGGGAGTGTAGTGGATGCAAGAACAGGAACTATGCTTTCCGATCGTTCTGTAACAGATGCAAACAACCTCGCCTTCTCGTCGACAATAAAACCCCTCCAGACTCCAAATGGCTTCCTCGCATCGGCGACTGGATCTGCACGGGTTAGCTTCCTATAATAACTTTAGTTGCTGTTCTTCCTTGCAACATGCAATTTATGTTATATTCTCGATTTCGTTTTGTTGGATTTGCTCGCTGAACTTGGAACTCAACGTTCAATTAGAATTTTAGTGCAGCACTATTCATTCAGTTCTTTCTGACACACCTCGGTGTCGGAATTTGGGTTGATGTTACTGTTTCTTTCTCTTTTAAAATTTTACAGGAGGAAAGTTTTGGAGTTAGTTTTATTACTCTTAATCCGACGAGGTCTCGTGCTTTGAAATTCTAGTTTTCGGGCTAAATGAAATGAGCTGATAGTTCTTGAAAATTTTCAATTTAGCTCCATTAAACTACTTCAAGAACATATTCAGTTACCTTACCAGGAAAATTTCACGAGAATCAGGGATATGCATCTATGTACGAACAGTTTTCTGTTTTTAGCAAATCGGTGGAATCTCCATTGCATCTTTATCACTAGTTAAAGATTTTCTCTGAGGATTGTTTTTCTGTCTTCCCTCTTCATTGATGTTTCAATTCCAGCGAACTCCTACTTTTAGGAAAATGAAAAATTAGGTTTGAGTCATGAGTCGTTTGTGTTTTTTGTATGTGTATTTGGTGTGGATGGACTGCTTGGTGTGCGTATACCTGGCTTGCTTGTGGGTTGGGTTTGTCTGGCTCTGGTGCAATAGGTTGCACTAACAACAATTATGCATCAAGAGAGAAGTGCAAAAAGTGTGGCCAACCAAAGGAGATAGCAGCAATGCCAGCAATTGCAATCCATGGAGCTTCTTTTCCAACTTATTCACACTATTTTGCCAGGACCCAAGGTGGATTGGATACAAAGATGAATCTTGGATTAAGAAATGGCCCTTTACAGCAACTGCATCCTCTGAGCTCCAATTGGTCCCTGGGAGGTGCTGATAAGTATGAAATTCATGCATCTCCAGCATTTCCTTTGGGTGGAAATAATTCTGCAATCTCGTATATGAGTTCCCCTAATCAGATCCTTTCAGTTCCGAAGGGTTGGCGAAACGGTGATTGGATATGCAACTGTGGCTTCCATAATTACTCTTCTCGTGCACAGGTGGGACTTTCACCTTCCCGTATCGAGTCGTTTTCTTTCTTTTCCTAGCGATGCTTTTAGTTTCCCTTTTTTGTCTCCACCTGTTGTTTGCTTGTCTAACTAAACATTGTCTTACTTGCAGTGCAAAAAATGCAATGCTTCACCACAAGGTACATCCACCTTTGTCTCTCTAGGTTTCAAATGCTCGCACTAGGACTTCTTTTTTAACGTTAGGAGACAAAATTATACAGCTCTTTTATAGTTTCTGCATGTAAGGAGTTATGGACCTGTGGTGTCCTGCACATAAAAATGTTTCTATTGTTTCGTTTATCCAATCTATCTCATGTTTTTGTTACGTTTAATGAATAGATTCATATTTTGGATTTGTAGTAATGTTTGACAGAAGTTTTGAACCGGTGGTGTCCTGCGCACAAAAATCTTTCTGTTGTTTTTTTAGTCTATTTATCTTCTTTGTTGCCGCGTTGAATGAATTGATTTGTATCTAGATTTGGAGTCATAATGTTTGAAAGATGGAAATTTTAGTAGAATGGAGAAACTTAGTTGGCCCTACGTGTGGCTGTGCTATTGTTCTGGAGGTAAAAGGTGTTACAGCTGAGATAAAGATGTCAATGGAAATAGAGTTGATTAGAATTAGAAATTTCTTCATGAAGTTGAGCACCCCTTGGGGGATTCTACTCACTTTCTTTCTTTGTCTTTTTTTCTTTTTGTTGTATTATGCAGCACTTGGAATGAAACGCTTAGCATCCGAAGAACTCGTTCATCAATGGGATAACAAGAGATTAAACATTGGACAGGTCCATATTTGATATTAAATGAGAATTTTATTATTACTATTTTTGGATTAGAAACAATGATAAACATTTGATATTAAGGAAATATTTGCTGTTAAAAATTGGTGAAACTGATCAGTGGCCTGTTCTTCTTTTCTTGGCATCAGACAAATGAGCAACAACAGTCTTTCCCAGGGTTTGAGCAGATGGTTGGTTCCAGTAGTGACCCAAATGTGGGACTATTATATAATTCTTATCCCCACGAAAGTTCTGGTATAGCTCCAAATTTGGAAATGCCAATGCAGTTCCCCCAACAAGCAACTGCACCAACGCTCCTTGGGAAAGGGTATAATATAATATGTATTTGCATTAGCTAGCTCTATTTCATTTTCTCTGACCTTCGAAGTTATGTCATAAATTCCAGTAAAACCCTGTTCTTCTTAGCCAAACTGCAACTAAGACTTGTGATGTCATTAATTCAAATTCATAATGTTTGACATTGACCAATCCTGGCATTATTGAATCCACAGAGCGAAACAGTGGCGCAACGGAGATTGGATGTGCACGAATTGCAATAATCATAATTATGCGTCTCGCTTACAATGTAACAGGTTATCATCTTAACTTGGTTTTTCTCCTTCACATTTAATATAGTTTTTTTTCTAAACATTCATGTTGAATGTGTCTGTATTACGCATTCGGATTATTATATTACGCATAGATATTTATTTTTTGGGTCTTATTATTAATCCTGTCAGGAGAGTGCTCGAGTGTTCTATGTTCTTATGGTTCCTAATTTAGTAGACTTCTTGTGAGATCCCCACCTCGGTTAGAGATGGAAACGAAACTTTCTTTATAAGGGTGTGGAAACTTTTTACTAGCAGACGTGTTTTAAAACCTTGAGGGGAAGCCCATAAGGGATAGTCCAAAAAGGACAATATTGAAAGGGGTGTGGAAACCTCTCCCTAGCAGACGTGTTTTAAAACCTTGAGGGGAAGCCCATAAGGAATAGTCTAAAAAGGACAATGTCTGCTAGCGGTGGGCTTAGACGGTTATACTTCTTACATGGAGTTTGGTAGCTTCCATTGCAGTGCACATCCAGTATTGTAATGCCTTTTTTGCAACAGGTGCAAGACTCCAAGAGATTCACTTTCACTGCCACTGAGTGCCATATAA

mRNA sequence

ATGGATGGAGTGAAGGAGGGGATAGAAAGAAAAGCAGCGTCACAAGTAGCAGTAATGGGCGAAGGAAAAGAAGGCGATTGGGAGTGTAGTGGATGCAAGAACAGGAACTATGCTTTCCGATCGTTCTGTAACAGATGCAAACAACCTCGCCTTCTCGTCGACAATAAAACCCCTCCAGACTCCAAATGGCTTCCTCGCATCGGCGACTGGATCTGCACGGGTTGCACTAACAACAATTATGCATCAAGAGAGAAGTGCAAAAAGTGTGGCCAACCAAAGGAGATAGCAGCAATGCCAGCAATTGCAATCCATGGAGCTTCTTTTCCAACTTATTCACACTATTTTGCCAGGACCCAAGGTGGATTGGATACAAAGATGAATCTTGGATTAAGAAATGGCCCTTTACAGCAACTGCATCCTCTGAGCTCCAATTGGTCCCTGGGAGGTGCTGATAAGTATGAAATTCATGCATCTCCAGCATTTCCTTTGGGTGGAAATAATTCTGCAATCTCGTATATGAGTTCCCCTAATCAGATCCTTTCAGTTCCGAAGGGTTGGCGAAACGGTGATTGGATATGCAACTGTGGCTTCCATAATTACTCTTCTCGTGCACAGTGCAAAAAATGCAATGCTTCACCACAAGCACTTGGAATGAAACGCTTAGCATCCGAAGAACTCGTTCATCAATGGGATAACAAGAGATTAAACATTGGACAGACAAATGAGCAACAACAGTCTTTCCCAGGGTTTGAGCAGATGGTTGGTTCCAGTAGTGACCCAAATGTGGGACTATTATATAATTCTTATCCCCACGAAAGTTCTGGTATAGCTCCAAATTTGGAAATGCCAATGCAGTTCCCCCAACAAGCAACTGCACCAACGCTCCTTGGGAAAGGAGCGAAACAGTGGCGCAACGGAGATTGGATGTGCACGAATTGCAATAATCATAATTATGCGTCTCGCTTACAATGTAACAGGTGCAAGACTCCAAGAGATTCACTTTCACTGCCACTGAGTGCCATATAA

Coding sequence (CDS)

ATGGATGGAGTGAAGGAGGGGATAGAAAGAAAAGCAGCGTCACAAGTAGCAGTAATGGGCGAAGGAAAAGAAGGCGATTGGGAGTGTAGTGGATGCAAGAACAGGAACTATGCTTTCCGATCGTTCTGTAACAGATGCAAACAACCTCGCCTTCTCGTCGACAATAAAACCCCTCCAGACTCCAAATGGCTTCCTCGCATCGGCGACTGGATCTGCACGGGTTGCACTAACAACAATTATGCATCAAGAGAGAAGTGCAAAAAGTGTGGCCAACCAAAGGAGATAGCAGCAATGCCAGCAATTGCAATCCATGGAGCTTCTTTTCCAACTTATTCACACTATTTTGCCAGGACCCAAGGTGGATTGGATACAAAGATGAATCTTGGATTAAGAAATGGCCCTTTACAGCAACTGCATCCTCTGAGCTCCAATTGGTCCCTGGGAGGTGCTGATAAGTATGAAATTCATGCATCTCCAGCATTTCCTTTGGGTGGAAATAATTCTGCAATCTCGTATATGAGTTCCCCTAATCAGATCCTTTCAGTTCCGAAGGGTTGGCGAAACGGTGATTGGATATGCAACTGTGGCTTCCATAATTACTCTTCTCGTGCACAGTGCAAAAAATGCAATGCTTCACCACAAGCACTTGGAATGAAACGCTTAGCATCCGAAGAACTCGTTCATCAATGGGATAACAAGAGATTAAACATTGGACAGACAAATGAGCAACAACAGTCTTTCCCAGGGTTTGAGCAGATGGTTGGTTCCAGTAGTGACCCAAATGTGGGACTATTATATAATTCTTATCCCCACGAAAGTTCTGGTATAGCTCCAAATTTGGAAATGCCAATGCAGTTCCCCCAACAAGCAACTGCACCAACGCTCCTTGGGAAAGGAGCGAAACAGTGGCGCAACGGAGATTGGATGTGCACGAATTGCAATAATCATAATTATGCGTCTCGCTTACAATGTAACAGGTGCAAGACTCCAAGAGATTCACTTTCACTGCCACTGAGTGCCATATAA

Protein sequence

MDGVKEGIERKAASQVAVMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDSKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQGGLDTKMNLGLRNGPLQQLHPLSSNWSLGGADKYEIHASPAFPLGGNNSAISYMSSPNQILSVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQTNEQQQSFPGFEQMVGSSSDPNVGLLYNSYPHESSGIAPNLEMPMQFPQQATAPTLLGKGAKQWRNGDWMCTNCNNHNYASRLQCNRCKTPRDSLSLPLSAI

Homology

[Close]

BLAST of Csor.00g113010 vs. ExPASy Swiss-Prot
Match: O13801 (Uncharacterized RNA-binding protein C17H9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC17H9.04c PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.0e-08
Identity = 44/152 (28.95%), Postives = 63/152 (41.45%), Query Frame = 0


Query: 66  RIGDWIC--TGCTNNNYASREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQGGLD 125
           R GDW C   GC  +N+A    C +CG  +  AA+  +A H AS P    Y   +   + 
Sbjct: 445 RAGDWKCGSEGCGYHNFAKNVCCLRCGASRATAAV--VADH-ASGPVNGSYSHNSYSHIP 504

Query: 126 TKMNLGLRNGPLQQLHPLSSNWSLGGADKYEIHASPAFPLGGNNSA-ISYMSSPNQILSV 185
             M+    N  +     LS N          + A+     GG N   +S      +   V
Sbjct: 505 PVMSTSPPNHSVYPYSQLSIN---------SVTANHGQNFGGQNGGNVSRFDDHGRFKEV 564

Query: 186 PK---GWRNGDWICNCGFHNYSSRAQCKKCNA 212
            +       GDW+C CGF N+  R+ C +CNA
Sbjct: 565 SRPSVTTDQGDWLCECGFTNFRRRSNCLRCNA 584

[Close]

BLAST of Csor.00g113010 vs. ExPASy Swiss-Prot
Match: Q27294 (RNA-binding protein cabeza OS=Drosophila melanogaster OX=7227 GN=caz PE=2 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 2.0e-05
Identity = 21/35 (60.00%), Postives = 26/35 (74.29%), Query Frame = 0


Query: 297 GKGAKQWRNGDWMCTNCNNHNYASRLQCNRCKTPR 332
           G G  Q R+GDW C +CNN N+A R +CNRCKTP+
Sbjct: 268 GGGNVQPRDGDWKCNSCNNTNFAWRNECNRCKTPK 302

[Close]

BLAST of Csor.00g113010 vs. NCBI nr
Match: XP_022926922.1 (uncharacterized RNA-binding protein C17H9.04c [Cucurbita moschata] >XP_023518720.1 uncharacterized RNA-binding protein C17H9.04c [Cucurbita pepo subsp. pepo] >KAG6594780.1 hypothetical protein SDJN03_11333, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 729 bits (1882), Expect = 4.47e-266
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 1   MDGVKEGIERKAASQVAVMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60
           MDGVKEGIERKAASQVAVMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD
Sbjct: 1   MDGVKEGIERKAASQVAVMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60

Query: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQG 120
           SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQG
Sbjct: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQG 120

Query: 121 GLDTKMNLGLRNGPLQQLHPLSSNWSLGGADKYEIHASPAFPLGGNNSAISYMSSPNQIL 180
           GLDTKMNLGLRNGPLQQLHPLSSNWSLGGADKYEIHASPAFPLGGNNSAISYMSSPNQIL
Sbjct: 121 GLDTKMNLGLRNGPLQQLHPLSSNWSLGGADKYEIHASPAFPLGGNNSAISYMSSPNQIL 180

Query: 181 SVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQT 240
           SVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQT
Sbjct: 181 SVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQT 240

Query: 241 NEQQQSFPGFEQMVGSSSDPNVGLLYNSYPHESSGIAPNLEMPMQFPQQATAPTLLGKGA 300
           NEQQQSFPGFEQMVGSSSDPNVGLLYNSYPHESSGIAPNLEMPMQFPQQATAPTLLGKGA
Sbjct: 241 NEQQQSFPGFEQMVGSSSDPNVGLLYNSYPHESSGIAPNLEMPMQFPQQATAPTLLGKGA 300

Query: 301 KQWRNGDWMCTNCNNHNYASRLQCNRCKTPRDSLSLPLSAI 341
           KQWRNGDWMCTNCNNHNYASRLQCNRCKTPRDSLSLPLSAI
Sbjct: 301 KQWRNGDWMCTNCNNHNYASRLQCNRCKTPRDSLSLPLSAI 341

[Close]

BLAST of Csor.00g113010 vs. NCBI nr
Match: XP_023003910.1 (uncharacterized RNA-binding protein C17H9.04c [Cucurbita maxima])

HSP 1 Score: 723 bits (1867), Expect = 8.66e-264
Identity = 338/341 (99.12%), Postives = 340/341 (99.71%), Query Frame = 0


Query: 1   MDGVKEGIERKAASQVAVMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60
           MDGVKEGIERKAASQVAVMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD
Sbjct: 1   MDGVKEGIERKAASQVAVMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60

Query: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQG 120
           SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQG
Sbjct: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQG 120

Query: 121 GLDTKMNLGLRNGPLQQLHPLSSNWSLGGADKYEIHASPAFPLGGNNSAISYMSSPNQIL 180
           GLDTKMNLGLRNGPLQQLHPLSSNWSLGGADKYEIHA+PAFPLGGNNSAISYMSSPNQIL
Sbjct: 121 GLDTKMNLGLRNGPLQQLHPLSSNWSLGGADKYEIHAAPAFPLGGNNSAISYMSSPNQIL 180

Query: 181 SVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQT 240
           SVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQT
Sbjct: 181 SVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQT 240

Query: 241 NEQQQSFPGFEQMVGSSSDPNVGLLYNSYPHESSGIAPNLEMPMQFPQQATAPTLLGKGA 300
           NEQQ SFPGFEQMVGSSSDPNVGLLYNSYPHESSGIAP+LEMPMQFPQQATAPTLLGKGA
Sbjct: 241 NEQQLSFPGFEQMVGSSSDPNVGLLYNSYPHESSGIAPSLEMPMQFPQQATAPTLLGKGA 300

Query: 301 KQWRNGDWMCTNCNNHNYASRLQCNRCKTPRDSLSLPLSAI 341
           KQWRNGDWMCTNCNNHNYASRLQCNRCKTPRDSLSLPLSAI
Sbjct: 301 KQWRNGDWMCTNCNNHNYASRLQCNRCKTPRDSLSLPLSAI 341

[Close]

BLAST of Csor.00g113010 vs. NCBI nr
Match: XP_038883349.1 (uncharacterized RNA-binding protein C17H9.04c [Benincasa hispida])

HSP 1 Score: 657 bits (1696), Expect = 9.79e-238
Identity = 312/342 (91.23%), Postives = 320/342 (93.57%), Query Frame = 0


Query: 1   MDGVKEGIERKAASQVAVMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60
           MDG KEGIE KAASQ   MGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD
Sbjct: 1   MDGGKEGIEGKAASQQ-TMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60

Query: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQG 120
           SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAI GASFPTYSHYFARTQG
Sbjct: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIPGASFPTYSHYFARTQG 120

Query: 121 GLDTKMNLGL-RNGPLQQLHPLSSNWSLGGADKYEIHASPAFPLGGNNSAISYMSSPNQI 180
           GLD+K+NLGL  NG  Q LHPLSSNWSLGGADKY IHA+P FPLGGNNSAISYMS  NQ+
Sbjct: 121 GLDSKINLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSLANQL 180

Query: 181 LSVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQ 240
           LSVPKGWRNGDW+CNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVH WDNKRLNIGQ
Sbjct: 181 LSVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHHWDNKRLNIGQ 240

Query: 241 TNEQQQSFPGFEQMVGSSSDPNVGLLYNSYPHESSGIAPNLEMPMQFPQQATAPTLLGKG 300
            NEQQQS+PGFEQM+GSSSDPNVGL YNSYPHESS +APNLEMPMQFP QATAP LLGKG
Sbjct: 241 ANEQQQSYPGFEQMMGSSSDPNVGL-YNSYPHESSNVAPNLEMPMQFPPQATAPALLGKG 300

Query: 301 AKQWRNGDWMCTNCNNHNYASRLQCNRCKTPRDSLSLPLSAI 341
           AKQWRNGDWMCTNCNNHNYASRLQCNRCKT RDSLSLPLSAI
Sbjct: 301 AKQWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI 340

[Close]

BLAST of Csor.00g113010 vs. NCBI nr
Match: XP_004134868.1 (uncharacterized RNA-binding protein C17H9.04c [Cucumis sativus] >KGN48905.1 hypothetical protein Csa_003493 [Cucumis sativus])

HSP 1 Score: 654 bits (1686), Expect = 3.27e-236
Identity = 308/342 (90.06%), Postives = 320/342 (93.57%), Query Frame = 0


Query: 1   MDGVKEGIERKAASQVAVMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60
           MDG KEGIE KA+ Q+A MGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD
Sbjct: 1   MDGGKEGIEGKASLQLA-MGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60

Query: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQG 120
           SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKE+AAMPA+AI GASFPTYSHYFARTQG
Sbjct: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQG 120

Query: 121 GLDTKMNLGL-RNGPLQQLHPLSSNWSLGGADKYEIHASPAFPLGGNNSAISYMSSPNQI 180
           GLD+KMNLGL  NG  Q LHPLSSNWSLGGADKY IHA+P FPL GNNSAISYMS  NQ+
Sbjct: 121 GLDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLSGNNSAISYMSLANQL 180

Query: 181 LSVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQ 240
           LSVPKGWRNGDW+CNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQ
Sbjct: 181 LSVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQ 240

Query: 241 TNEQQQSFPGFEQMVGSSSDPNVGLLYNSYPHESSGIAPNLEMPMQFPQQATAPTLLGKG 300
            NEQQQS+PGFEQM+G+ SDPNVGL YNSYPHESS +APNLEMPMQFP QATAPTLLGKG
Sbjct: 241 ANEQQQSYPGFEQMMGAGSDPNVGL-YNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKG 300

Query: 301 AKQWRNGDWMCTNCNNHNYASRLQCNRCKTPRDSLSLPLSAI 341
           AKQWRNGDWMCTNCNNHNYASRL CNRCKT RDSLSLPLSAI
Sbjct: 301 AKQWRNGDWMCTNCNNHNYASRLHCNRCKTQRDSLSLPLSAI 340

[Close]

BLAST of Csor.00g113010 vs. NCBI nr
Match: XP_008440810.1 (PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Cucumis melo])

HSP 1 Score: 653 bits (1685), Expect = 4.65e-236
Identity = 307/342 (89.77%), Postives = 321/342 (93.86%), Query Frame = 0


Query: 1   MDGVKEGIERKAASQVAVMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60
           MDG KEGIE KA+SQ+A MGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD
Sbjct: 1   MDGGKEGIEGKASSQLA-MGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60

Query: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQG 120
           SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKE+AAMPA+AI GASFPTYSHYFARTQG
Sbjct: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQG 120

Query: 121 GLDTKMNLGL-RNGPLQQLHPLSSNWSLGGADKYEIHASPAFPLGGNNSAISYMSSPNQI 180
           GLD+KMNLGL  NG  Q LHPLSSNWS+GGADKY IHA+P FPLGGNNSAISYMS  NQ+
Sbjct: 121 GLDSKMNLGLIGNGTSQHLHPLSSNWSMGGADKYGIHAAPTFPLGGNNSAISYMSLANQL 180

Query: 181 LSVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQ 240
           LSVPKGWRNGDW+CNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQ
Sbjct: 181 LSVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQ 240

Query: 241 TNEQQQSFPGFEQMVGSSSDPNVGLLYNSYPHESSGIAPNLEMPMQFPQQATAPTLLGKG 300
            NEQQQS+PG EQM+G+SSDPNVGL YN YPHESS +APNLEMP+QFP QATAPTLLGKG
Sbjct: 241 ANEQQQSYPGLEQMMGTSSDPNVGL-YNPYPHESSSVAPNLEMPIQFPPQATAPTLLGKG 300

Query: 301 AKQWRNGDWMCTNCNNHNYASRLQCNRCKTPRDSLSLPLSAI 341
           AKQWRNGDWMCTNCNNHNYASRL CNRCKT RDSLSLPLSAI
Sbjct: 301 AKQWRNGDWMCTNCNNHNYASRLHCNRCKTQRDSLSLPLSAI 340

[Close]

BLAST of Csor.00g113010 vs. ExPASy TrEMBL
Match: A0A6J1EFP4 (uncharacterized RNA-binding protein C17H9.04c OS=Cucurbita moschata OX=3662 GN=LOC111433894 PE=4 SV=1)

HSP 1 Score: 729 bits (1882), Expect = 2.16e-266
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 1   MDGVKEGIERKAASQVAVMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60
           MDGVKEGIERKAASQVAVMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD
Sbjct: 1   MDGVKEGIERKAASQVAVMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60

Query: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQG 120
           SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQG
Sbjct: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQG 120

Query: 121 GLDTKMNLGLRNGPLQQLHPLSSNWSLGGADKYEIHASPAFPLGGNNSAISYMSSPNQIL 180
           GLDTKMNLGLRNGPLQQLHPLSSNWSLGGADKYEIHASPAFPLGGNNSAISYMSSPNQIL
Sbjct: 121 GLDTKMNLGLRNGPLQQLHPLSSNWSLGGADKYEIHASPAFPLGGNNSAISYMSSPNQIL 180

Query: 181 SVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQT 240
           SVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQT
Sbjct: 181 SVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQT 240

Query: 241 NEQQQSFPGFEQMVGSSSDPNVGLLYNSYPHESSGIAPNLEMPMQFPQQATAPTLLGKGA 300
           NEQQQSFPGFEQMVGSSSDPNVGLLYNSYPHESSGIAPNLEMPMQFPQQATAPTLLGKGA
Sbjct: 241 NEQQQSFPGFEQMVGSSSDPNVGLLYNSYPHESSGIAPNLEMPMQFPQQATAPTLLGKGA 300

Query: 301 KQWRNGDWMCTNCNNHNYASRLQCNRCKTPRDSLSLPLSAI 341
           KQWRNGDWMCTNCNNHNYASRLQCNRCKTPRDSLSLPLSAI
Sbjct: 301 KQWRNGDWMCTNCNNHNYASRLQCNRCKTPRDSLSLPLSAI 341

[Close]

BLAST of Csor.00g113010 vs. ExPASy TrEMBL
Match: A0A6J1KT42 (uncharacterized RNA-binding protein C17H9.04c OS=Cucurbita maxima OX=3661 GN=LOC111497358 PE=4 SV=1)

HSP 1 Score: 723 bits (1867), Expect = 4.19e-264
Identity = 338/341 (99.12%), Postives = 340/341 (99.71%), Query Frame = 0


Query: 1   MDGVKEGIERKAASQVAVMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60
           MDGVKEGIERKAASQVAVMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD
Sbjct: 1   MDGVKEGIERKAASQVAVMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60

Query: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQG 120
           SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQG
Sbjct: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQG 120

Query: 121 GLDTKMNLGLRNGPLQQLHPLSSNWSLGGADKYEIHASPAFPLGGNNSAISYMSSPNQIL 180
           GLDTKMNLGLRNGPLQQLHPLSSNWSLGGADKYEIHA+PAFPLGGNNSAISYMSSPNQIL
Sbjct: 121 GLDTKMNLGLRNGPLQQLHPLSSNWSLGGADKYEIHAAPAFPLGGNNSAISYMSSPNQIL 180

Query: 181 SVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQT 240
           SVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQT
Sbjct: 181 SVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQT 240

Query: 241 NEQQQSFPGFEQMVGSSSDPNVGLLYNSYPHESSGIAPNLEMPMQFPQQATAPTLLGKGA 300
           NEQQ SFPGFEQMVGSSSDPNVGLLYNSYPHESSGIAP+LEMPMQFPQQATAPTLLGKGA
Sbjct: 241 NEQQLSFPGFEQMVGSSSDPNVGLLYNSYPHESSGIAPSLEMPMQFPQQATAPTLLGKGA 300

Query: 301 KQWRNGDWMCTNCNNHNYASRLQCNRCKTPRDSLSLPLSAI 341
           KQWRNGDWMCTNCNNHNYASRLQCNRCKTPRDSLSLPLSAI
Sbjct: 301 KQWRNGDWMCTNCNNHNYASRLQCNRCKTPRDSLSLPLSAI 341

[Close]

BLAST of Csor.00g113010 vs. ExPASy TrEMBL
Match: A0A0A0KGM9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505830 PE=4 SV=1)

HSP 1 Score: 654 bits (1686), Expect = 1.59e-236
Identity = 308/342 (90.06%), Postives = 320/342 (93.57%), Query Frame = 0


Query: 1   MDGVKEGIERKAASQVAVMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60
           MDG KEGIE KA+ Q+A MGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD
Sbjct: 1   MDGGKEGIEGKASLQLA-MGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60

Query: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQG 120
           SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKE+AAMPA+AI GASFPTYSHYFARTQG
Sbjct: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQG 120

Query: 121 GLDTKMNLGL-RNGPLQQLHPLSSNWSLGGADKYEIHASPAFPLGGNNSAISYMSSPNQI 180
           GLD+KMNLGL  NG  Q LHPLSSNWSLGGADKY IHA+P FPL GNNSAISYMS  NQ+
Sbjct: 121 GLDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLSGNNSAISYMSLANQL 180

Query: 181 LSVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQ 240
           LSVPKGWRNGDW+CNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQ
Sbjct: 181 LSVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQ 240

Query: 241 TNEQQQSFPGFEQMVGSSSDPNVGLLYNSYPHESSGIAPNLEMPMQFPQQATAPTLLGKG 300
            NEQQQS+PGFEQM+G+ SDPNVGL YNSYPHESS +APNLEMPMQFP QATAPTLLGKG
Sbjct: 241 ANEQQQSYPGFEQMMGAGSDPNVGL-YNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKG 300

Query: 301 AKQWRNGDWMCTNCNNHNYASRLQCNRCKTPRDSLSLPLSAI 341
           AKQWRNGDWMCTNCNNHNYASRL CNRCKT RDSLSLPLSAI
Sbjct: 301 AKQWRNGDWMCTNCNNHNYASRLHCNRCKTQRDSLSLPLSAI 340

[Close]

BLAST of Csor.00g113010 vs. ExPASy TrEMBL
Match: A0A1S3B1J3 (uncharacterized RNA-binding protein C17H9.04c OS=Cucumis melo OX=3656 GN=LOC103485118 PE=4 SV=1)

HSP 1 Score: 653 bits (1685), Expect = 2.25e-236
Identity = 307/342 (89.77%), Postives = 321/342 (93.86%), Query Frame = 0


Query: 1   MDGVKEGIERKAASQVAVMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60
           MDG KEGIE KA+SQ+A MGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD
Sbjct: 1   MDGGKEGIEGKASSQLA-MGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60

Query: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQG 120
           SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKE+AAMPA+AI GASFPTYSHYFARTQG
Sbjct: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQG 120

Query: 121 GLDTKMNLGL-RNGPLQQLHPLSSNWSLGGADKYEIHASPAFPLGGNNSAISYMSSPNQI 180
           GLD+KMNLGL  NG  Q LHPLSSNWS+GGADKY IHA+P FPLGGNNSAISYMS  NQ+
Sbjct: 121 GLDSKMNLGLIGNGTSQHLHPLSSNWSMGGADKYGIHAAPTFPLGGNNSAISYMSLANQL 180

Query: 181 LSVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQ 240
           LSVPKGWRNGDW+CNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQ
Sbjct: 181 LSVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQ 240

Query: 241 TNEQQQSFPGFEQMVGSSSDPNVGLLYNSYPHESSGIAPNLEMPMQFPQQATAPTLLGKG 300
            NEQQQS+PG EQM+G+SSDPNVGL YN YPHESS +APNLEMP+QFP QATAPTLLGKG
Sbjct: 241 ANEQQQSYPGLEQMMGTSSDPNVGL-YNPYPHESSSVAPNLEMPIQFPPQATAPTLLGKG 300

Query: 301 AKQWRNGDWMCTNCNNHNYASRLQCNRCKTPRDSLSLPLSAI 341
           AKQWRNGDWMCTNCNNHNYASRL CNRCKT RDSLSLPLSAI
Sbjct: 301 AKQWRNGDWMCTNCNNHNYASRLHCNRCKTQRDSLSLPLSAI 340

[Close]

BLAST of Csor.00g113010 vs. ExPASy TrEMBL
Match: A0A6J1BXT0 (uncharacterized RNA-binding protein C17H9.04c OS=Momordica charantia OX=3673 GN=LOC111005702 PE=4 SV=1)

HSP 1 Score: 639 bits (1649), Expect = 6.91e-231
Identity = 306/342 (89.47%), Postives = 316/342 (92.40%), Query Frame = 0


Query: 1   MDGVKEGIERKAASQVAVMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60
           MDG KEG+E KA+ QVA M EGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD
Sbjct: 1   MDGGKEGMEAKASLQVA-MAEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60

Query: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQG 120
           SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKE+AAMPAIAI GASFPTYSHYFARTQG
Sbjct: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPAIAIPGASFPTYSHYFARTQG 120

Query: 121 GLDTKMNLGL-RNGPLQQLHPLSSNWSLGGADKYEIHASPAFPLGGNNSAISYMSSPNQI 180
           GL+TKMNLGL  NG  QQ HPLSSNW LGG DKY IHA+  FPLGGNNSAISYMSS NQI
Sbjct: 121 GLNTKMNLGLIGNGTSQQPHPLSSNWPLGGVDKYGIHAAQTFPLGGNNSAISYMSSTNQI 180

Query: 181 LSVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQ 240
           L VPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVH WD+KRLNIGQ
Sbjct: 181 LLVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHPWDSKRLNIGQ 240

Query: 241 TNEQQQSFPGFEQMVGSSSDPNVGLLYNSYPHESSGIAPNLEMPMQFPQQATAPTLLGKG 300
           TNEQQQS+PGFEQ+V SSSD NVGL YNSY HESSG+APNLEM M FPQQ+TAPTLLGKG
Sbjct: 241 TNEQQQSYPGFEQIVSSSSDLNVGL-YNSYSHESSGVAPNLEMVMNFPQQSTAPTLLGKG 300

Query: 301 AKQWRNGDWMCTNCNNHNYASRLQCNRCKTPRDSLSLPLSAI 341
           AKQWRNGDWMCTNCNNHNYASRLQCNRCKT RDSLSLPLSAI
Sbjct: 301 AKQWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI 340

[Close]

BLAST of Csor.00g113010 vs. TAIR 10
Match: AT2G17975.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 356.7 bits (914), Expect = 2.1e-98
Identity = 178/317 (56.15%), Postives = 206/317 (64.98%), Query Frame = 0


Query: 19  MGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDSKWLPRIGDWICTGCTNN 78
           MG+G+EGDWEC GC+NRNYAFRSFCNRCKQPRL++DN T P+SKWLPRIGDWICTGCTNN
Sbjct: 1   MGDGREGDWECLGCRNRNYAFRSFCNRCKQPRLIMDNNTSPNSKWLPRIGDWICTGCTNN 60

Query: 79  NYASREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQGGLDTKMNLGLRNGPLQQL 138
           NYASREKCKKCGQ KE+AA+ A+AI GAS  T+ HYF R               GP    
Sbjct: 61  NYASREKCKKCGQSKEVAALSALAIPGASLQTHLHYFTR---------------GP---- 120

Query: 139 HPLSSNWSLGGADKYEIHASPAFPLGGNNSAISYMSSPNQILSVPKGWRNGDWICNCGFH 198
                          E H  P        S +++ ++ NQ  SV K WR+GDWIC CGFH
Sbjct: 121 ---------------ESHDQP-------GSLLAFSNATNQ-ASVHKEWRSGDWICRCGFH 180

Query: 199 NYSSRAQCKKCN-ASPQALGMKRLASEELVHQWDNKRLNIGQTNEQQQSFPGFEQMVGSS 258
           NYSSR QCKKCN  +P ALG KRLASE L H+WD+KRLN G T+ Q QS           
Sbjct: 181 NYSSRIQCKKCNEIAPLALGTKRLASEALAHEWDSKRLNQGYTSMQTQS----------- 240

Query: 259 SDPNVGLLYNSYPHESSGIAPNLEMPMQFPQQATAPTLLGKGAKQWRNGDWMCTNCNNHN 318
                  +Y S+P  S G   N ++P+ F QQ + P LLG G KQWR+GDWMCTNC NHN
Sbjct: 241 ------AIYASFPGMSLGRVSNWQLPLPFLQQHSTPALLGMGVKQWRDGDWMCTNCKNHN 258

Query: 319 YASRLQCNRCKTPRDSL 335
           YASR +CNRCKT RD L
Sbjct: 301 YASRAECNRCKTTRDIL 258

[Close]

BLAST of Csor.00g113010 vs. TAIR 10
Match: AT5G25490.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 73.9 bits (180), Expect = 2.7e-13
Identity = 63/221 (28.51%), Postives = 87/221 (39.37%), Query Frame = 0


Query: 23  KEGDWECSGCKNRNYAFRSFCNRCKQPR-------LLVDNKTPPDSKWL-------PRIG 82
           + GDW C  C + N+  R  C RC++PR       LL      P S           R G
Sbjct: 3   RPGDWNCRLCSHLNFQRRDSCQRCREPRPGGISTDLLSGFGGRPVSSSFGFNTGPDVRPG 62

Query: 83  DWICT--GCTNNNYASREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQGGLDTKM 142
           DW C    C  +N+A+R  C KCG  K+  +  +               A T G +D  M
Sbjct: 63  DWYCNLGDCGTHNFANRSSCFKCGAAKDEFSCSSA--------------AATTGFMD--M 122

Query: 143 NLGLRNGPLQQLHPLSSNWSLGGADKYEIHASPAFPLGGNNSAISYMSSPNQILSVPKGW 202
           N+G R G           +  GG+             GG  +  S              W
Sbjct: 123 NVGPRRG----------LFGFGGSSS-----------GGGGTGRS-------------PW 167

Query: 203 RNGDWIC---NCGFHNYSSRAQCKKCNASPQALGMKRLASE 225
           ++GDWIC    C  HN++SR++C +CNA       K LA+E
Sbjct: 183 KSGDWICPRSGCNEHNFASRSECFRCNAP------KELATE 167

[Close]

BLAST of Csor.00g113010 vs. TAIR 10
Match: AT2G26695.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 4.6e-13
Identity = 51/194 (26.29%), Postives = 69/194 (35.57%), Query Frame = 0


Query: 25  GDWECSGCKNRNYAFRSFCNRCKQPRL-LVDNKTPPDSKWLPRIGDWIC--TGCTNNNYA 84
           GDW C  C++ N+  R  C +C  P+   VD  T   ++     GDW C    C ++NYA
Sbjct: 6   GDWLCGACQHANFKKRESCQKCGYPKFGGVDVSTYLYNRTEVMAGDWYCGALNCGSHNYA 65

Query: 85  SREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQGGLDTKMNLGLRNGPLQQLHPL 144
           SR  C +CG    I        +GA    Y                              
Sbjct: 66  SRTSCYRCGM---IKVEYTEQYYGAQMVAY------------------------------ 125

Query: 145 SSNWSLGGADKYEIHASPAFPLGGNNSAISYMSSPNQILSVPKGWRNGDWIC---NCGFH 204
                                  GN+ A           + P GW+ GDW+C    CG H
Sbjct: 126 -----------------------GNDGA-----------ACPPGWKTGDWVCPRVGCGVH 132

Query: 205 NYSSRAQCKKCNAS 213
           NY+SRA+C KC  +
Sbjct: 186 NYASRAECFKCKTT 132

[Close]

BLAST of Csor.00g113010 vs. TAIR 10
Match: AT3G15680.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 56.2 bits (134), Expect = 5.9e-08
Identity = 55/215 (25.58%), Postives = 71/215 (33.02%), Query Frame = 0


Query: 23  KEGDWECSGCKNRNYAFRSFCNRCKQPR--------LLVDN-----------KTPPDSKW 82
           + GDW C  C + N+  R  C RC   R        L   N            T  D   
Sbjct: 3   RPGDWNCRSCSHLNFQRRDSCQRCGDSRSGPGGVGGLDFGNFGGRAMSAFGFTTGSD--- 62

Query: 83  LPRIGDWICT--GCTNNNYASREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQGG 142
             R GDW CT   C  +N+ASR  C KCG  K+                       T  G
Sbjct: 63  -VRPGDWYCTVGNCGTHNFASRSTCFKCGTFKD----------------------ETGAG 122

Query: 143 LDTKMNLGLRNGPLQQLHPLSSNWSLGGADKY--EIHASPAFPLGGNNSAISYMSSPNQI 202
                                    +GG   +  +I  S     GG +S           
Sbjct: 123 --------------------GGGGGIGGPAMFDADIMRSRVPGNGGRSS----------- 154

Query: 203 LSVPKGWRNGDWIC---NCGFHNYSSRAQCKKCNA 212
                 W++GDWIC    C  HN++SR +C +CNA
Sbjct: 183 ------WKSGDWICTRIGCNEHNFASRMECFRCNA 154

[Close]

BLAST of Csor.00g113010 vs. TAIR 10
Match: AT1G48570.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 45.4 bits (106), Expect = 1.0e-04
Identity = 37/144 (25.69%), Postives = 55/144 (38.19%), Query Frame = 0


Query: 69  DWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIHGASF-PTYSHY-FARTQGGLDTKM 128
           DW C  C   N+A  E+C++C +  +   + A+   G    P  S   F R Q  L  K 
Sbjct: 302 DWACPKCDFVNFARNERCRECNEVADRRPVAAVVKEGDWLCPECSFLNFTRNQSCLKCKA 361

Query: 129 NLGLRNGPLQQLHPLSSNWSLGGADKYEIHASPAFPLGGNNSAISYMSSPNQILSVPKGW 188
               +   +  +     +W+  G   Y   AS       N          ++ L+ P   
Sbjct: 362 KGPKKTSMVNIVEMKKGDWNCTGCG-YMNFAS-------NKQCRECREQRHKTLAEP--- 421

Query: 189 RNGDWIC-NCGFHNYSSRAQCKKC 210
             GDW C +C F N+     CKKC
Sbjct: 422 --GDWECPSCDFVNFRRNDACKKC 432

The following BLAST results are available for this feature:

BLAST of Csor.00g113010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O13801	2.0e-08	28.95	Uncharacterized RNA-binding protein C17H9.04c OS=Schizosaccharomyces pombe (stra...	[more]
Q27294	2.0e-05	60.00	RNA-binding protein cabeza OS=Drosophila melanogaster OX=7227 GN=caz PE=2 SV=2	[more]

BLAST of Csor.00g113010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926922.1	4.47e-266	100.00	uncharacterized RNA-binding protein C17H9.04c [Cucurbita moschata] >XP_023518720...	[more]
XP_023003910.1	8.66e-264	99.12	uncharacterized RNA-binding protein C17H9.04c [Cucurbita maxima]	[more]
XP_038883349.1	9.79e-238	91.23	uncharacterized RNA-binding protein C17H9.04c [Benincasa hispida]	[more]
XP_004134868.1	3.27e-236	90.06	uncharacterized RNA-binding protein C17H9.04c [Cucumis sativus] >KGN48905.1 hypo...	[more]
XP_008440810.1	4.65e-236	89.77	PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Cucumis melo]	[more]

BLAST of Csor.00g113010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EFP4	2.16e-266	100.00	uncharacterized RNA-binding protein C17H9.04c OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1KT42	4.19e-264	99.12	uncharacterized RNA-binding protein C17H9.04c OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A0A0KGM9	1.59e-236	90.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505830 PE=4 SV=1	[more]
A0A1S3B1J3	2.25e-236	89.77	uncharacterized RNA-binding protein C17H9.04c OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1BXT0	6.91e-231	89.47	uncharacterized RNA-binding protein C17H9.04c OS=Momordica charantia OX=3673 GN=...	[more]

BLAST of Csor.00g113010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17975.1	2.1e-98	56.15	zinc finger (Ran-binding) family protein	[more]
AT5G25490.1	2.7e-13	28.51	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT2G26695.1	4.6e-13	26.29	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT3G15680.1	5.9e-08	25.58	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT1G48570.1	1.0e-04	25.69	zinc finger (Ran-binding) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 189..212 e-value: 6.8E-5 score: 32.3 coord: 68..92 e-value: 2.1E-8 score: 43.9 coord: 306..330 e-value: 1.9E-7 score: 40.7 coord: 25..49 e-value: 1.8E-6 score: 37.5
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 304..331 e-value: 3.1E-8 score: 32.8 coord: 66..94 e-value: 1.9E-7 score: 30.2 coord: 23..50 e-value: 3.7E-7 score: 29.3
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 70..89
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 308..327
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 27..46
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 23..52 score: 9.946939
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 304..333 score: 10.692225
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 66..95 score: 10.071154
None	No IPR available	GENE3D	4.10.1060.10		coord: 299..333 e-value: 7.1E-11 score: 43.2 coord: 183..214 e-value: 4.0E-8 score: 34.4 coord: 20..51 e-value: 7.6E-9 score: 36.7 coord: 61..95 e-value: 2.5E-10 score: 41.4
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 21..154
None	No IPR available	PANTHER	PTHR23111:SF71	OS04G0110600 PROTEIN	coord: 21..154 coord: 297..338 coord: 184..259
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 297..338 coord: 184..259
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 60..94
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 185..212
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 298..332
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 23..51

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g113010.m01	Csor.00g113010.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070935	3'-UTR-mediated mRNA stabilization
biological_process	GO:0009737	response to abscisic acid
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003723	RNA binding