Csor.00g112770 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g112770
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	folate transporter 1, chloroplastic-like isoform X2
Location	Csor_Chr07: 2056234 .. 2061174 (-)
RNA-Seq Expression	Csor.00g112770
Synteny	Csor.00g112770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTCCGCACCCGGTTTCAAGGTAGCTTACTTATGTAACCGCTCAAAGTTAGCTTGCGTTTGTCACCAAAAATCTGGAGTTTCAAGTCTTTTTACCCCTAACATTTGTTTTTGTTCCTTTGCCCTCGAAATGGCAGGTTGTGATCGCAGAGGATCCAGTCTCCCGACTTACAAGAATACAGTTAATGCAATCTTCACTATTGGTCGGATGGAGGTTTGTAGATTCAGTGTTTGCTACTCCTAATTCCGATCATTTGTTGGCCTTTTCTGCTATTTCCCCACGAATTTTGTGATCTGGGCTATACTAATTTGGTTCTTCTGTAAAAGAAATGGTAAACTTAGTGAAAGTGCCTTGAAATTTGCTTGCTTAACCTTTTAGATGAAACTTTGTTCGAATATGGCTCGCAACTCACATTTTCAGGATGAATTCTTCCTCGCATAGACCAAATTCTTCTGCCATTTGTCCTAGTCTAAGACCCTAAATCCGAACCATAAACCGCATCCGATTTTAGTATAAGGAACAGTTGTGGAACGCCTTTAGTATGATCCTTATACAGTTCTTCATCGACACGAGACAAAAAAGCTCTCATGATCCTCTCATGACTTTACAATTTTAGTATAAACCGCATCCGATTTTAGTATAAGTATCCTTATGTGTGTCTAATCTTATCCATATCGTAATTAAATGACTCATGCTAATGCTTGAGTCCATTTTTGTGCTTTCAGACTGCCCATCATCTGTTGCATTTGACCCGTCCCACATGTGACTTGTGAATATTCACTTTGCATAAAGTACAGTTGGAGCACACAGCCTTGCCTCTTAGAATAAATTATAGGTCATGTTTGAGAAATATTTTGTTTTGGTTTGTTGTTTTTTAAAAATTAAGCATACAAATACTACTTTTGTTCATGTGTTTCTTTGTTTTGCTACCTATATTTTTGTCAAAATCTTCTAAATTTTGAAAACTAAAGAAGTCTTGTTTTAAAGAGAAAGTTCAAGGATACAAACTCCCAAAGGGAGTGTAGAGAACAAGCAACCGAACCAATAAGTAAAAGATTCCCAAAGGATACATACTCCCAAAGGGAGTGAAGAGAACCAGCAACCGAACCAGTAAGTAAAAGATTCCCAAAGGATACATACTCCCAAAGGGAGTGAAGAGAACCAGCAACCGAACCAATAAGTAAAAGATTCCCAAAGGATACATACTCCCAAAGGGAGTGAAGAGAACCAGCAACCGAACCAATAAGTAAAAGATTCCCAAAGGATACGTGCTCCCAAAGGGAGTGAAGAGAACCGGCAACCAATCCAGTTCCCAAAGGATACATACTCTCAAAGAGAGTGAAGAGAACCAGCAACCAAACCAATAAATAAAAGATTCCCAAGGAATACATACAACCAAAGGGAGTGAAAGAACCAGCAACCAAACCAATAAGGAAAAGATTCTCAAAGGATACTATAGCCAAAATAAAACATCAAGGAATGAAGTGCCCAGGCGACAAACAAACAAACAAACAAACAAAATTGTTCTAAAAGCAAGGCTGCTTAACTGAAGAGCCATTGAAGCTAGAACCATATACAAACCAACTCCTAAACGGCTAAACCACTGTTCATAGGACAAAACTCAGTGAGAAAGCCTTGCAGACTCCAGGAAGAAAGGCTACTCCAACTCCCTTTCAAGTCCACGAGGAACATTGAAAGCAAACCCCTTCTCAGACAAAGGACCTGCTGCAAGCTTTAAAAATTTACAAAGGTCATCAATAATATCTGAATAATCTTTTGGAGCTTCTGAAGTGTTGAGATCAGCATTAATGATAGAGTTATTTCCCTTGATGAAGGATATAAAAGCCCTTCATCGCTTGAATCTTTGGAAAAGTCATGCAGATTCCTTTCAAAATTAGAACCAATGCTACTAAATCTACCAACTGGATCATTACTAAAATCCAAACTATCCTCCTCTAAAGCACCTTTGATATCCTCAAATGAGAAAAGGGAAAACAAAAGTACCAAGGGAAGGGATCGGTCACCTTTGAGAATTATTAAAAAAACCCAACAAATTTTGCAATATCCTCAAACGAGCTCAAATCTCTAGTACTAGAGGGAGGGGCAACCAACTTTGAACCATCCTTGAGGCCTCTTCAGCTAAAGACAAGAGGGAAAGGCTATTAGTTAGCAACTCTTGTAGTGAACTTGTGATATAATTATCCTACTTGTGATTTAAGTACATAACTGAAGTCTGTCCAAGCGATTGACTAATTTATTAATATTTTCTTTGTTGGCTGAACATTTCATCTAGTCTTTCAAACTCCATTAAATGTTTTCCCCGTTTTATGGTAGCAGGAGCTTTGGTGAGTCCAACATGAAGCTCTGCAATACCTTCTTGGACCTTTTATGCTTTTTACGTCAAACAATTCCATTATTGCACTTTTGACTTACTAGAAAAATGTTTCTCTGTCCTCATTTTATTAGAGTTTTTAGTTTTTATTATGTTAACAATTGTGGTTCTACTGCCTCTTCAGGTTTGTTTTTTGCACATATCCAGTTTGGCTTGTGAAAACAAGAATGCAGCTTCAGAATCCTCTTCATCAAGCGCAACCTCATTCTGGGCTATATGGTCTGCCCTTCTATCTTAATATGCTCTCTGGGATATATCTTATCCTAGTAAATTACAAGATCTTGTGATTTGTATTCAAGTTAAGCTTCAGTATTTCATATTTTCCCCCTTCTCTCCCACCGTGTCGTGATAATGTTTAATGGCTTATAATGATGATGATGGGATGGTTTTTAGTTCGAAAACTGTGACTGTTGTTTTAAGTTAAGCTTCAGTTGTTTTATCTAGTCTACCTTGATTTTTTAGACTTGTCAAAGAATGAAAGCTTTTCAAAGAAACAATTCATCAAAAAGAGAGAATAAATAAGGGAAACAACAAGAAGTCCAAACCCATTCGTAAACCGAAGGATTTTACTAAAAATTCTCCTCTTGGTTTTGTTTAGAAAGAAGTAGTAATCACAAAAAAGAAAAAAAGAAAAAAAGATATGAAGCTGAGTTGTATCCCACCTCTCTTCTTTCTTCCATCAGCTATAATTGTAGTGTAGTTATCCCCTTCGTAGATATTTCATTGCTTTGCTCTATTACTTCTCATTCATTTGATTCTGTGCACATCTATCGTGTTTAATTGCAGATGCCTTCAGAACCATCTTGAGGGAGGAAAGTTTTGCTGCTCCGTGTAAAGGGATTTTTCCTGGCCTTTTCCTCGTAAGCTGTTTGGATTTAGTTTATGTTTTCTCTTAACAGTGTGATTATTTTGCTTTTCCACAGTAATCTTATTATATTACTTAGTTTTTGTAACCCATTGGTTTTGTGAGGATATCTCATCTCCCCTCTTTTTGCAATTTTGGCTCCGTTAATAGCATCATACGTTTCCTATCTATCCATCTATATATCAATACATATATGCATATTGATTAAACTTTCGTGGCTTCCATTCATATCATTATACTCTAATTTTCATTTTATCAAATATGGGATCTTGGGATCAGTTTTTTTTATCCTTTTCTTCCTTTATTCCTTTTTTTCCCTCCTATTTCTTGTGGGGTTGTAAAAATGTTGTTGAGGGTTTTTATGGAATGGGAGAGTTTTTGTACATTTGTCATAAAAAGGCATTCTGTTGACAGAATTTCATGGAATTAGTTCATAGATGTGTTTGGTTGCTTCAGATGGTTTCTCATGGTGCATTCATTTTACAGTTTATGAAGAACTCCGTACATTTATTGCCAACTCGAGGTCTAGATGGACCAAAATGGATGCTCAAAGTTCTGAGGAATTACTGGTACAAGTTTCTGGCTTGAGTTTACTAACACCACTATATTGAGTTATGGGAGAAGTGGAAATGTGTGATCCCACCTCTATTTTGGAGAGGGGAACGAATCATTCCTTTAAGGGTGTGGAAACCTCTCCCTAGTGGACACATTTTATTAAAACCTTGAGGGGAAGCTCGAAAGGGAAAGCCCAAAGAGAATAATATCGGCTAGCCTTGGGCTATTACAAATGGTATTAGAGCTAGACACCGGGCGATATGCCAACGAGGACGCTGGGCCTTCCAAGGGGGATGGATTGTGAGATTCCACATTGGTTGGAGAGGGGAATGAGGCATTCCTTATAAGAGTGTGGAAACCTCTTCCTAGTGGACGCGTTTTAAAACCTTGAGAAGAAGTCCGAAAGGGAAAGCCCAAAAAGGATAATATCTACTAGTGGTGACCTTGTGCTGTTAAAGGAAATATTTATTTGATCTAGCCTATAGCGTATAATCTTTTCAGATGCTTGTCCTCCATATAGCTAATCATACAATAGTATATTCGAGTATATCTTAGCCTCTTCCATTCACCTAGGGTATATTCTTGCAATGATCATAAATTATAAGCAACATTCAGATGACATAAAAACCATTGCCTTTTAAGAACCTTACTCCATTAGTTCTAATCTTCGCCGCATGAAATACTCTTACTGTGAGTTTTTTTCATGCAGAATTCAATTGATTATGCTGTTCTTGGAGGATCTTCTAAAATTGCTGCCATGCTCTGACATACCCATTTCAAGTAAATAGAAATTTGACTTATGGTATGAACTATGGTGTTGTTTTTATAGTCATTTATCTTAGCTGACTCTTGAGTGACTTGGTTCTCAAAAGAATGTCCCTGTGGCTTGGATCACGTTCATTATGTATGAAAACGTCTTAAACTTCCTCAAACTGACAAGACAAAGGGAATAAAATTTGTTGTTCCAACTATGTTGCTATTTCTTCATTGCAGAAGCTGGTATTTGTATTCCAACAATTGAGTATTTAATCCATTGCTTTCCTCTTTCTTCATGTTAATGAAAATCTCTCTGCTTTTGAGATTACAGGAGGTGAAGCACAGAGCCTATGTACAAAGACATTTATAG

mRNA sequence

ATGTCGTCCGCACCCGGTTTCAAGGTTGTGATCGCAGAGGATCCAGTCTCCCGACTTACAAGAATACAGTTAATGCAATCTTCACTATTGGTCGGATGGAGGTTTGTTTTTTGCACATATCCAGTTTGGCTTGTGAAAACAAGAATGCAGCTTCAGAATCCTCTTCATCAAGCGCAACCTCATTCTGGGCTATATGATGCCTTCAGAACCATCTTGAGGGAGGAAAGTTTTGCTGCTCCGTGTAAAGGGATTTTTCCTGGCCTTTTCCTCTTTATGAAGAACTCCGTACATTTATTGCCAACTCGAGGTCTAGATGGACCAAAATGGATGCTCAAAGTTCTGAGGAATTACTGGTACAAAATTCAATTGATTATGCTGTTCTTGGAGGATCTTCTAAAATTGCTGCCATGCTCTGACATACCCATTTCAAAATGTCCCTGTGGCTTGGATCACGTTCATTATAAGCTGGAGGTGAAGCACAGAGCCTATGTACAAAGACATTTATAG

Coding sequence (CDS)

ATGTCGTCCGCACCCGGTTTCAAGGTTGTGATCGCAGAGGATCCAGTCTCCCGACTTACAAGAATACAGTTAATGCAATCTTCACTATTGGTCGGATGGAGGTTTGTTTTTTGCACATATCCAGTTTGGCTTGTGAAAACAAGAATGCAGCTTCAGAATCCTCTTCATCAAGCGCAACCTCATTCTGGGCTATATGATGCCTTCAGAACCATCTTGAGGGAGGAAAGTTTTGCTGCTCCGTGTAAAGGGATTTTTCCTGGCCTTTTCCTCTTTATGAAGAACTCCGTACATTTATTGCCAACTCGAGGTCTAGATGGACCAAAATGGATGCTCAAAGTTCTGAGGAATTACTGGTACAAAATTCAATTGATTATGCTGTTCTTGGAGGATCTTCTAAAATTGCTGCCATGCTCTGACATACCCATTTCAAAATGTCCCTGTGGCTTGGATCACGTTCATTATAAGCTGGAGGTGAAGCACAGAGCCTATGTACAAAGACATTTATAG

Protein sequence

MSSAPGFKVVIAEDPVSRLTRIQLMQSSLLVGWRFVFCTYPVWLVKTRMQLQNPLHQAQPHSGLYDAFRTILREESFAAPCKGIFPGLFLFMKNSVHLLPTRGLDGPKWMLKVLRNYWYKIQLIMLFLEDLLKLLPCSDIPISKCPCGLDHVHYKLEVKHRAYVQRHL

Homology

[Close]

BLAST of Csor.00g112770 vs. ExPASy Swiss-Prot
Match: Q7XA87 (Folate transporter 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FOLT1 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 6.9e-15
Identity = 39/72 (54.17%), Postives = 48/72 (66.67%), Query Frame = 0


Query: 25  MQSSLLVGWRFVFCTYPVWLVKTRMQLQNPLHQAQPHSGLYDAFRTILREESFAAPCKGI 84
           + S+   G     CT P+WLVKTR+QLQ PLHQ QP+SGL DAFRTI++EE   A  KGI
Sbjct: 110 LASAAEAGALVCLCTNPIWLVKTRLQLQTPLHQTQPYSGLLDAFRTIVKEEGPRALYKGI 169

Query: 85  FPGLFLFMKNSV 97
            PGL L    ++
Sbjct: 170 VPGLVLVSHGAI 181

[Close]

BLAST of Csor.00g112770 vs. ExPASy Swiss-Prot
Match: Q54QN2 (Mitochondrial substrate carrier family protein M OS=Dictyostelium discoideum OX=44689 GN=mcfM PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.3e-05
Identity = 23/63 (36.51%), Postives = 37/63 (58.73%), Query Frame = 0


Query: 36  VFCTYPVWLVKTRMQLQNPLHQAQPHSGLYDAFRTILREESFAAPCKGIFPGLFLFMKNS 95
           VF T P++L+KTRMQLQ P   A  ++G++D  +  ++ E F    KG+ P L+L     
Sbjct: 125 VFITNPIFLIKTRMQLQTP-GSANYYTGIFDGIKKTVKVEGFKGLYKGVIPSLWLTFHGG 184

Query: 96  VHL 99
           + +
Sbjct: 185 IQM 186

[Close]

BLAST of Csor.00g112770 vs. ExPASy Swiss-Prot
Match: P40556 (Mitochondrial nicotinamide adenine dinucleotide transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YIA6 PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 5.0e-05
Identity = 23/60 (38.33%), Postives = 34/60 (56.67%), Query Frame = 0


Query: 39  TYPVWLVKTRMQLQNPLHQAQPH-SGLYDAFRTILREESFAAPCKGIFPGLFLFMKNSVH 98
           T P+W+VKTR+ LQ+ L +   H  G +DAFR +  +E F A   G+ P L      ++H
Sbjct: 194 TNPIWVVKTRLMLQSNLGEHPTHYKGTFDAFRKLFYQEGFKALYAGLVPSLLGLFHVAIH 253

[Close]

BLAST of Csor.00g112770 vs. ExPASy Swiss-Prot
Match: O43808 (Peroxisomal membrane protein PMP34 OS=Homo sapiens OX=9606 GN=SLC25A17 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.1e-04
Identity = 24/74 (32.43%), Postives = 38/74 (51.35%), Query Frame = 0


Query: 36  VFCTYPVWLVKTRMQLQNPLHQAQP-----HSGLYDAFRTILREESFAAPCKGIFPGLFL 95
           V  T P+W+V TR++LQ    + +      + G+ DAF  I+R+E  +A   G FP L L
Sbjct: 116 VLLTTPLWVVNTRLKLQGAKFRNEDIVPTNYKGIIDAFHQIIRDEGISALWNGTFPSLLL 175

Query: 96  FMKNSVHLLPTRGL 105
               ++  +   GL
Sbjct: 176 VFNPAIQFMFYEGL 189

[Close]

BLAST of Csor.00g112770 vs. ExPASy Swiss-Prot
Match: O70579 (Peroxisomal membrane protein PMP34 OS=Mus musculus OX=10090 GN=Slc25a17 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.9e-04
Identity = 24/74 (32.43%), Postives = 37/74 (50.00%), Query Frame = 0


Query: 36  VFCTYPVWLVKTRMQLQNPLHQAQP-----HSGLYDAFRTILREESFAAPCKGIFPGLFL 95
           V  T P+W+V TR++LQ    + +      + G+ DAF  I+R+E   A   G FP L L
Sbjct: 116 VLLTTPLWVVNTRLKLQGAKFRNEDIIPTNYKGIIDAFHQIIRDEGILALWNGTFPSLLL 175

Query: 96  FMKNSVHLLPTRGL 105
               ++  +   GL
Sbjct: 176 VFNPAIQFMFYEGL 189

[Close]

BLAST of Csor.00g112770 vs. NCBI nr
Match: KAG6594804.1 (Folate transporter 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 355 bits (910), Expect = 1.11e-123
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MSSAPGFKVVIAEDPVSRLTRIQLMQSSLLVGWRFVFCTYPVWLVKTRMQLQNPLHQAQP 60
           MSSAPGFKVVIAEDPVSRLTRIQLMQSSLLVGWRFVFCTYPVWLVKTRMQLQNPLHQAQP
Sbjct: 1   MSSAPGFKVVIAEDPVSRLTRIQLMQSSLLVGWRFVFCTYPVWLVKTRMQLQNPLHQAQP 60

Query: 61  HSGLYDAFRTILREESFAAPCKGIFPGLFLFMKNSVHLLPTRGLDGPKWMLKVLRNYWYK 120
           HSGLYDAFRTILREESFAAPCKGIFPGLFLFMKNSVHLLPTRGLDGPKWMLKVLRNYWYK
Sbjct: 61  HSGLYDAFRTILREESFAAPCKGIFPGLFLFMKNSVHLLPTRGLDGPKWMLKVLRNYWYK 120

Query: 121 IQLIMLFLEDLLKLLPCSDIPISKCPCGLDHVHYKLEVKHRAYVQRHL 168
           IQLIMLFLEDLLKLLPCSDIPISKCPCGLDHVHYKLEVKHRAYVQRHL
Sbjct: 121 IQLIMLFLEDLLKLLPCSDIPISKCPCGLDHVHYKLEVKHRAYVQRHL 168

[Close]

BLAST of Csor.00g112770 vs. NCBI nr
Match: XP_023543244.1 (folate transporter 1, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 102 bits (255), Expect = 7.45e-23
Identity = 57/102 (55.88%), Postives = 63/102 (61.76%), Query Frame = 0


Query: 19  LTRIQLMQSSLLVGWRFVFCTYPVWLVKTRMQLQNPLHQAQPHSGLYDAFRTILREESFA 78
           LT    + S+   G    FCT PVWLVKTRMQLQNPLHQAQP+SGLYDAFRTILREE FA
Sbjct: 100 LTPTLHLASAAEAGALVCFCTNPVWLVKTRMQLQNPLHQAQPYSGLYDAFRTILREEGFA 159

Query: 79  APCKGIFPGLFLFMKNSVHLLPTRGLDGPKWMLKVLRNYWYK 120
           A  KGI PGL L    ++       L       KV+ N  YK
Sbjct: 160 ALYKGIVPGLMLVSHGAIQFTVYEELR------KVIANSRYK 195

[Close]

BLAST of Csor.00g112770 vs. NCBI nr
Match: XP_022978988.1 (folate transporter 1, chloroplastic-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 102 bits (254), Expect = 1.02e-22
Identity = 55/96 (57.29%), Postives = 61/96 (63.54%), Query Frame = 0


Query: 25  MQSSLLVGWRFVFCTYPVWLVKTRMQLQNPLHQAQPHSGLYDAFRTILREESFAAPCKGI 84
           + S+   G    FCT PVWLVKTRMQLQNPLHQAQP+SGLYDAFRTILREE FAA  KGI
Sbjct: 105 LASAAEAGALVCFCTNPVWLVKTRMQLQNPLHQAQPYSGLYDAFRTILREEGFAALYKGI 164

Query: 85  FPGLFLFMKNSVHLLPTRGLDGPKWMLKVLRNYWYK 120
            PGL L    ++       L       KV+ N  YK
Sbjct: 165 VPGLMLVSHGAIQFTVYEELR------KVIANSRYK 194

[Close]

BLAST of Csor.00g112770 vs. NCBI nr
Match: XP_022949619.1 (folate transporter 1, chloroplastic-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 102 bits (254), Expect = 1.04e-22
Identity = 55/96 (57.29%), Postives = 61/96 (63.54%), Query Frame = 0


Query: 25  MQSSLLVGWRFVFCTYPVWLVKTRMQLQNPLHQAQPHSGLYDAFRTILREESFAAPCKGI 84
           + S+   G    FCT PVWLVKTRMQLQNPLHQAQP+SGLYDAFRTILREE FAA  KGI
Sbjct: 106 LASAAEAGALVCFCTNPVWLVKTRMQLQNPLHQAQPYSGLYDAFRTILREEGFAALYKGI 165

Query: 85  FPGLFLFMKNSVHLLPTRGLDGPKWMLKVLRNYWYK 120
            PGL L    ++       L       KV+ N  YK
Sbjct: 166 VPGLMLVSHGAIQFTVYEELR------KVIANSRYK 195

[Close]

BLAST of Csor.00g112770 vs. NCBI nr
Match: XP_022949620.1 (folate transporter 1, chloroplastic-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 100 bits (250), Expect = 1.74e-22
Identity = 49/71 (69.01%), Postives = 54/71 (76.06%), Query Frame = 0


Query: 25  MQSSLLVGWRFVFCTYPVWLVKTRMQLQNPLHQAQPHSGLYDAFRTILREESFAAPCKGI 84
           + S+   G    FCT PVWLVKTRMQLQNPLHQAQP+SGLYDAFRTILREE FAA  KGI
Sbjct: 106 LASAAEAGALVCFCTNPVWLVKTRMQLQNPLHQAQPYSGLYDAFRTILREEGFAALYKGI 165

Query: 85  FPGLFLFMKNS 95
            PGL L + + 
Sbjct: 166 VPGLMLQVSHG 176

[Close]

BLAST of Csor.00g112770 vs. ExPASy TrEMBL
Match: A0A6J1IUU6 (folate transporter 1, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478771 PE=3 SV=1)

HSP 1 Score: 102 bits (254), Expect = 4.96e-23
Identity = 55/96 (57.29%), Postives = 61/96 (63.54%), Query Frame = 0


Query: 25  MQSSLLVGWRFVFCTYPVWLVKTRMQLQNPLHQAQPHSGLYDAFRTILREESFAAPCKGI 84
           + S+   G    FCT PVWLVKTRMQLQNPLHQAQP+SGLYDAFRTILREE FAA  KGI
Sbjct: 105 LASAAEAGALVCFCTNPVWLVKTRMQLQNPLHQAQPYSGLYDAFRTILREEGFAALYKGI 164

Query: 85  FPGLFLFMKNSVHLLPTRGLDGPKWMLKVLRNYWYK 120
            PGL L    ++       L       KV+ N  YK
Sbjct: 165 VPGLMLVSHGAIQFTVYEELR------KVIANSRYK 194

[Close]

BLAST of Csor.00g112770 vs. ExPASy TrEMBL
Match: A0A6J1GDC9 (folate transporter 1, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452956 PE=3 SV=1)

HSP 1 Score: 102 bits (254), Expect = 5.04e-23
Identity = 55/96 (57.29%), Postives = 61/96 (63.54%), Query Frame = 0


Query: 25  MQSSLLVGWRFVFCTYPVWLVKTRMQLQNPLHQAQPHSGLYDAFRTILREESFAAPCKGI 84
           + S+   G    FCT PVWLVKTRMQLQNPLHQAQP+SGLYDAFRTILREE FAA  KGI
Sbjct: 106 LASAAEAGALVCFCTNPVWLVKTRMQLQNPLHQAQPYSGLYDAFRTILREEGFAALYKGI 165

Query: 85  FPGLFLFMKNSVHLLPTRGLDGPKWMLKVLRNYWYK 120
            PGL L    ++       L       KV+ N  YK
Sbjct: 166 VPGLMLVSHGAIQFTVYEELR------KVIANSRYK 195

[Close]

BLAST of Csor.00g112770 vs. ExPASy TrEMBL
Match: A0A6J1GD94 (folate transporter 1, chloroplastic-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111452956 PE=3 SV=1)

HSP 1 Score: 100 bits (250), Expect = 8.40e-23
Identity = 49/71 (69.01%), Postives = 54/71 (76.06%), Query Frame = 0


Query: 25  MQSSLLVGWRFVFCTYPVWLVKTRMQLQNPLHQAQPHSGLYDAFRTILREESFAAPCKGI 84
           + S+   G    FCT PVWLVKTRMQLQNPLHQAQP+SGLYDAFRTILREE FAA  KGI
Sbjct: 106 LASAAEAGALVCFCTNPVWLVKTRMQLQNPLHQAQPYSGLYDAFRTILREEGFAALYKGI 165

Query: 85  FPGLFLFMKNS 95
            PGL L + + 
Sbjct: 166 VPGLMLQVSHG 176

[Close]

BLAST of Csor.00g112770 vs. ExPASy TrEMBL
Match: A0A6J1IPH7 (folate transporter 1, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478771 PE=3 SV=1)

HSP 1 Score: 100 bits (250), Expect = 1.93e-22
Identity = 49/71 (69.01%), Postives = 54/71 (76.06%), Query Frame = 0


Query: 25  MQSSLLVGWRFVFCTYPVWLVKTRMQLQNPLHQAQPHSGLYDAFRTILREESFAAPCKGI 84
           + S+   G    FCT PVWLVKTRMQLQNPLHQAQP+SGLYDAFRTILREE FAA  KGI
Sbjct: 105 LASAAEAGALVCFCTNPVWLVKTRMQLQNPLHQAQPYSGLYDAFRTILREEGFAALYKGI 164

Query: 85  FPGLFLFMKNS 95
            PGL L + + 
Sbjct: 165 VPGLMLQVSHG 175

[Close]

BLAST of Csor.00g112770 vs. ExPASy TrEMBL
Match: A0A6J1GCK1 (folate transporter 1, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452956 PE=3 SV=1)

HSP 1 Score: 100 bits (250), Expect = 1.96e-22
Identity = 49/71 (69.01%), Postives = 54/71 (76.06%), Query Frame = 0


Query: 25  MQSSLLVGWRFVFCTYPVWLVKTRMQLQNPLHQAQPHSGLYDAFRTILREESFAAPCKGI 84
           + S+   G    FCT PVWLVKTRMQLQNPLHQAQP+SGLYDAFRTILREE FAA  KGI
Sbjct: 106 LASAAEAGALVCFCTNPVWLVKTRMQLQNPLHQAQPYSGLYDAFRTILREEGFAALYKGI 165

Query: 85  FPGLFLFMKNS 95
            PGL L + + 
Sbjct: 166 VPGLMLQVSHG 176

[Close]

BLAST of Csor.00g112770 vs. TAIR 10
Match: AT5G66380.1 (folate transporter 1 )

HSP 1 Score: 82.0 bits (201), Expect = 4.9e-16
Identity = 39/72 (54.17%), Postives = 48/72 (66.67%), Query Frame = 0


Query: 25  MQSSLLVGWRFVFCTYPVWLVKTRMQLQNPLHQAQPHSGLYDAFRTILREESFAAPCKGI 84
           + S+   G     CT P+WLVKTR+QLQ PLHQ QP+SGL DAFRTI++EE   A  KGI
Sbjct: 110 LASAAEAGALVCLCTNPIWLVKTRLQLQTPLHQTQPYSGLLDAFRTIVKEEGPRALYKGI 169

Query: 85  FPGLFLFMKNSV 97
            PGL L    ++
Sbjct: 170 VPGLVLVSHGAI 181

[Close]

BLAST of Csor.00g112770 vs. TAIR 10
Match: AT4G11440.1 (Mitochondrial substrate carrier family protein )

HSP 1 Score: 42.4 bits (98), Expect = 4.3e-04
Identity = 24/73 (32.88%), Postives = 37/73 (50.68%), Query Frame = 0


Query: 20  TRIQLMQSSLLVGWRFVFCTYPVWLVKTRMQLQNPLHQAQPHSGLYDAFRTILREESFAA 79
           T +Q +    L G    F T P  +VKTR+Q Q P  + Q H  +Y   ++I R+E    
Sbjct: 515 TTLQTLTCGGLAGSAAAFFTTPFDVVKTRLQTQIPGSRNQ-HPSVYQTLQSIRRQEGLRG 574

Query: 80  PCKGIFPGLFLFM 93
             +G+ P L ++M
Sbjct: 575 LYRGLIPRLVMYM 586

The following BLAST results are available for this feature:

BLAST of Csor.00g112770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XA87	6.9e-15	54.17	Folate transporter 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FOLT1 PE=...	[more]
Q54QN2	1.3e-05	36.51	Mitochondrial substrate carrier family protein M OS=Dictyostelium discoideum OX=...	[more]
P40556	5.0e-05	38.33	Mitochondrial nicotinamide adenine dinucleotide transporter 1 OS=Saccharomyces c...	[more]
O43808	1.1e-04	32.43	Peroxisomal membrane protein PMP34 OS=Homo sapiens OX=9606 GN=SLC25A17 PE=1 SV=1	[more]
O70579	1.9e-04	32.43	Peroxisomal membrane protein PMP34 OS=Mus musculus OX=10090 GN=Slc25a17 PE=1 SV=...	[more]

BLAST of Csor.00g112770 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6594804.1	1.11e-123	100.00	Folate transporter 1, chloroplastic, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_023543244.1	7.45e-23	55.88	folate transporter 1, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022978988.1	1.02e-22	57.29	folate transporter 1, chloroplastic-like isoform X2 [Cucurbita maxima]	[more]
XP_022949619.1	1.04e-22	57.29	folate transporter 1, chloroplastic-like isoform X2 [Cucurbita moschata]	[more]
XP_022949620.1	1.74e-22	69.01	folate transporter 1, chloroplastic-like isoform X3 [Cucurbita moschata]	[more]

BLAST of Csor.00g112770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IUU6	4.96e-23	57.29	folate transporter 1, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1GDC9	5.04e-23	57.29	folate transporter 1, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=366...	[more]
A0A6J1GD94	8.40e-23	69.01	folate transporter 1, chloroplastic-like isoform X3 OS=Cucurbita moschata OX=366...	[more]
A0A6J1IPH7	1.93e-22	69.01	folate transporter 1, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1GCK1	1.96e-22	69.01	folate transporter 1, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=366...	[more]

BLAST of Csor.00g112770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66380.1	4.9e-16	54.17	folate transporter 1	[more]
AT4G11440.1	4.3e-04	32.88	Mitochondrial substrate carrier family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018108	Mitochondrial substrate/solute carrier	PFAM	PF00153	Mito_carr	coord: 30..92 e-value: 3.7E-10 score: 39.6
IPR018108	Mitochondrial substrate/solute carrier	PROSITE	PS50920	SOLCAR	coord: 19..107 score: 10.156025
IPR023395	Mitochondrial carrier domain superfamily	GENE3D	1.50.40.10	Mitochondrial carrier domain	coord: 13..100 e-value: 6.0E-11 score: 43.7
IPR023395	Mitochondrial carrier domain superfamily	SUPERFAMILY	103506	Mitochondrial carrier	coord: 14..99
IPR044712	NAD/FAD transporter SLC25A32-like	PANTHER	PTHR45683	MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED	coord: 31..96
None	No IPR available	PANTHER	PTHR45683:SF12	BNAA09G07970D PROTEIN	coord: 31..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g112770.m01	Csor.00g112770.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006862	nucleotide transport
biological_process	GO:0015711	organic anion transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0015230	FAD transmembrane transporter activity
molecular_function	GO:0008517	folic acid transmembrane transporter activity