Csor.00g112350 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTACTTCATTGCCTTTACCGGAACTTGTTTTCGTCTCGCCGAAGCGCCTTCTGTCTACTTCCAGTTCCAGATGTATGCACTATAGGATTCCTCTCTCTAGAAGCTGTAATTTTCGTGTTCTTTTTCGGACTAAGGTCAACGCTGTTAGAGAAGACGGAGTGATTGTTGACAAGAGAGAGAGCGAGTTGATCAAGGAAGCTAATGGTTATGAACTTGGTGGCAATGGAGCTGCTTACAAGGAGAATGGCGATTACAGGTATAATGGCTGGGTTAATGGTGGAGTTACGGTTGTGGAGAGTGAGACTGATAGTAGTAATGGGAGCTTAATGAAGTATGTTAATGGAAATGGTGTTGCTGCGACGGTGGTGGGGGAAATTCAAGCTTCGGAGTCGACGGAGGAGGGGAGGAAGAAGAGGATAGAGGAGATTGGTAAAGAAGAGGCTTGGTTCAAGCGGAGTGAACAGCAACAGACCGAGGTTTGA ATGGCTACTTCATTGCCTTTACCGGAACTTGTTTTCGTCTCGCCGAAGCGCCTTCTGTCTACTTCCAGTTCCAGATGTATGCACTATAGGATTCCTCTCTCTAGAAGCTGTAATTTTCGTGTTCTTTTTCGGACTAAGGTCAACGCTGTTAGAGAAGACGGAGTGATTGTTGACAAGAGAGAGAGCGAGTTGATCAAGGAAGCTAATGGTTATGAACTTGGTGGCAATGGAGCTGCTTACAAGGAGAATGGCGATTACAGGTATAATGGCTGGGTTAATGGTGGAGTTACGGTTGTGGAGAGTGAGACTGATAGTAGTAATGGGAGCTTAATGAAGTATGTTAATGGAAATGGTGTTGCTGCGACGGTGGTGGGGGAAATTCAAGCTTCGGAGTCGACGGAGGAGGGGAGGAAGAAGAGGATAGAGGAGATTGGTAAAGAAGAGGCTTGGTTCAAGCGGAGTGAACAGCAACAGACCGAGGTTTGA ATGGCTACTTCATTGCCTTTACCGGAACTTGTTTTCGTCTCGCCGAAGCGCCTTCTGTCTACTTCCAGTTCCAGATGTATGCACTATAGGATTCCTCTCTCTAGAAGCTGTAATTTTCGTGTTCTTTTTCGGACTAAGGTCAACGCTGTTAGAGAAGACGGAGTGATTGTTGACAAGAGAGAGAGCGAGTTGATCAAGGAAGCTAATGGTTATGAACTTGGTGGCAATGGAGCTGCTTACAAGGAGAATGGCGATTACAGGTATAATGGCTGGGTTAATGGTGGAGTTACGGTTGTGGAGAGTGAGACTGATAGTAGTAATGGGAGCTTAATGAAGTATGTTAATGGAAATGGTGTTGCTGCGACGGTGGTGGGGGAAATTCAAGCTTCGGAGTCGACGGAGGAGGGGAGGAAGAAGAGGATAGAGGAGATTGGTAAAGAAGAGGCTTGGTTCAAGCGGAGTGAACAGCAACAGACCGAGGTTTGA MATSLPLPELVFVSPKRLLSTSSSRCMHYRIPLSRSCNFRVLFRTKVNAVREDGVIVDKRESELIKEANGYELGGNGAAYKENGDYRYNGWVNGGVTVVESETDSSNGSLMKYVNGNGVAATVVGEIQASESTEEGRKKRIEEIGKEEAWFKRSEQQQTEV Homology
BLAST of Csor.00g112350 vs. ExPASy Swiss-Prot
Match: Q93Y08 (Protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ABC1K8 PE=2 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.2e-10 Identity = 63/167 (37.72%), Postives = 92/167 (55.09%), Query Frame = 0
BLAST of Csor.00g112350 vs. NCBI nr
Match: KAG6594846.1 (Protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 312 bits (799), Expect = 5.54e-107 Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
BLAST of Csor.00g112350 vs. NCBI nr
Match: KAG7026809.1 (hypothetical protein SDJN02_10816 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 310 bits (795), Expect = 3.81e-100 Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0
BLAST of Csor.00g112350 vs. NCBI nr
Match: XP_023517648.1 (protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 301 bits (771), Expect = 3.75e-95 Identity = 154/161 (95.65%), Postives = 158/161 (98.14%), Query Frame = 0
BLAST of Csor.00g112350 vs. NCBI nr
Match: XP_023003223.1 (protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 300 bits (769), Expect = 7.42e-95 Identity = 155/161 (96.27%), Postives = 157/161 (97.52%), Query Frame = 0
BLAST of Csor.00g112350 vs. NCBI nr
Match: XP_022962957.1 (protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 298 bits (763), Expect = 5.86e-94 Identity = 154/159 (96.86%), Postives = 155/159 (97.48%), Query Frame = 0
BLAST of Csor.00g112350 vs. ExPASy TrEMBL
Match: A0A6J1KVV5 (protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111496898 PE=4 SV=1) HSP 1 Score: 300 bits (769), Expect = 3.59e-95 Identity = 155/161 (96.27%), Postives = 157/161 (97.52%), Query Frame = 0
BLAST of Csor.00g112350 vs. ExPASy TrEMBL
Match: A0A6J1HDY2 (protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111463308 PE=4 SV=1) HSP 1 Score: 298 bits (763), Expect = 2.84e-94 Identity = 154/159 (96.86%), Postives = 155/159 (97.48%), Query Frame = 0
BLAST of Csor.00g112350 vs. ExPASy TrEMBL
Match: A0A6J1BU11 (uncharacterized protein LOC111005545 OS=Momordica charantia OX=3673 GN=LOC111005545 PE=4 SV=1) HSP 1 Score: 258 bits (660), Expect = 4.14e-79 Identity = 134/161 (83.23%), Postives = 144/161 (89.44%), Query Frame = 0
BLAST of Csor.00g112350 vs. ExPASy TrEMBL
Match: A0A0A0KJ06 (ABC1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G501880 PE=4 SV=1) HSP 1 Score: 249 bits (636), Expect = 1.34e-75 Identity = 127/161 (78.88%), Postives = 139/161 (86.34%), Query Frame = 0
BLAST of Csor.00g112350 vs. ExPASy TrEMBL
Match: A0A5D3CNB7 (Putative aarF domain-containing protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002360 PE=4 SV=1) HSP 1 Score: 243 bits (620), Expect = 2.90e-73 Identity = 126/161 (78.26%), Postives = 137/161 (85.09%), Query Frame = 0
BLAST of Csor.00g112350 vs. TAIR 10
Match: AT5G64940.1 (ABC2 homolog 13 ) HSP 1 Score: 67.0 bits (162), Expect = 1.6e-11 Identity = 63/167 (37.72%), Postives = 92/167 (55.09%), Query Frame = 0
BLAST of Csor.00g112350 vs. TAIR 10
Match: AT5G64940.2 (ABC2 homolog 13 ) HSP 1 Score: 67.0 bits (162), Expect = 1.6e-11 Identity = 63/167 (37.72%), Postives = 92/167 (55.09%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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