Csor.00g112090 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g112090
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	PLAT domain-containing protein
Location	Csor_Chr07: 2372439 .. 2374978 (+)
RNA-Seq Expression	Csor.00g112090
Synteny	Csor.00g112090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCCAAATCTCCCCTCTTCCTCTCCCTCTCCCTTCTCCTTACCCTCTCCGTCGTCGCTCTCTCCGATGTATTTTCTCTCTCAATTTTCTCCTCCATTTTAGCGATTAGAACCTAAAATGACTGACCAACATTTCCGATTTGATTGATGCAGGATCCAGATTGCGTCTACACGGTGTATGTCAGGACCGGCTCCATCCTCAAAGCAGGGACGGATTCGGTGATTAGCGCGACGCTCTACACCGCCAATGGCGACGGAATCCTCATCAGAGATCTGGAGAAATGGGGCGGCTTAATGGGACCTGATTACAACTACTTCGAGAGGGGCAATCTCGACATTTTCAGCGGAAGAGGACCATGCCTGAGCGCACCCGTGTGTTCCTTGAATCTGACCTCCGACGGATCCGGTCCGCACCATGGCTGGTACTGCAACTACTTCGAGGTCACCACAACGGGTGTCCACAGGCCCTGCGATCAAGCCCAGTTCACGGTGGAGCAGTGGTTAGCCCTCGATACATCGCCGTATGTGTTGACCGCCATCCGTGATAACTGCCCCAAGGAATCGATTGGAAGCCGCCGTGATCCAACCCGATCGGGTCCCCTGAGGTTGAAGCAGGTCATATGAGATTTAATCGTATTGTCGAATAAGGAAGCGGGAGAGTGTGCCCTTCTGGTGTTGGTGTGTAAAAGTTGGATCGAGAGCAGTGCCTTACTTTTTAGCTTTACTTTATGATTCGATCCATTATTGTGGGTTTGGTATGGTGTGGGTCACGAATCATGAATGCCTTTGCAATGCCCAAAGGACAAATAATCATAATACCCCATTTTATTTCGGTACCCAATTTAAAACTTGGTGTCGGCAACATAATGGGAGAAAAAAAATCTATTGATTCATAGTCTTTGCTTAAGATCTAGAACAATAACATTCAATCTATGGATAATAACATCTGAGTAATGCATTAATCGATTAGACCATAGTATAGATGATGAAGATACGAAGATAAATTAAGACAGAACATAGACAACAATCTATTATCGATACTGTTTTCACGATCTTGAGCCTTAAAAAATCCCTCTCTGGCTCCAAAGTTCTTCTCCTAACTCTCATTAAACTCGCATTATCCTCCATTTTCATGGAAGATTGTGATTTGGGCTGAATGAGAGGTGGATCGTTGATGGGCTAATGGGCTAAGGAGCTAATGGGCTAATGGGCTAGTGGGCTAAGGGGTTTTTATATTTTACATGGTCTGGACTTCTTTTTGTGTTTTATTTTACACTTTAATTGGTTATTAATTCATTTAACGTCTTTTAAAATTCACGAAGTTATCAAAAGGAGAGTCCTTTTTTTGGGACACAATTGTCAGTTCTTTGAATATTTTTTTAATTTATTTAAGGTCTCTTGCACCATCGACTTTGATCTTGACTCGTAAATAAAAGACTTTGATTTTGACTCGTAAATAAAGAGCTCAGACCAATATCTTCTTTCATTCCATACCAAATTAATATTGAGTAGGTATATTATTCTAAATTTAATCATTAATTTATTAAACAAAATAATTAAAAAGAAAAAAACTGAAATTAATATTTTACCCGCCAATGTAAATGTCTGAAAAAGAAAGGGTGAAAATTATTACTGTACTGTAAAAAGAAAATGGGGGTAAAGCAACCTAATCCAATCCAATCCAAGTTTGACCCAATTGAAGATCAAAGACTCCAACTGCATCTCCCTTCTCCCTGTCCTGACACGTCAACTCAATCTTATTAATTCAACCGATGAGATGATAGACGCCAAAGAATCAGTGGTGGTCCGTCCACCACCTTAATTTTTTCTTTTTATCTCTTTTTTCACCAGGTAAAAATACGACTTGTCGGGTAGAATAAGGATCAAAGAAATAGAAACTTAATGACTCACATCATGAAATTAATAATAATATTATCAAAATAATGTGAAAGTACAAAATTGGAGTTGGGATAGGTCCGTAATAGCATGACGTGGCAGTGATTTTCTTGACTCAACCTTTTTTCCAAATTATTCACTTTATTTTATTTCTTATTTTCTTGAAAATCCTCCTTATTATTACTTATAAATTTAATTAATTAACCGTAGTTTAACTATTCGGGTTAATAATTAAGGAACAATTGTTGGCTAGGGCCGGTGAAAAAACAGAGGCATTTACTTTGACTCTGGGATTGGAGCATCTTGAGTCCCCACTTTCATCGTTTTTCGTGGAGCAAATCTACAAACACAAGCAACCTCTCTTTTTCACAACAAACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCAATTCCCCCATCTTCTCCTTTCTCCAAAAACCCTAACCCCATACGAACTTTTGAGGTTCAGGAGTGGAGCTTCCACTTCACCGGTCCACCTCCGCCACCAACCATCTCGTGGGTTGTTGGATCCTACCTTCCGGTGGCTTTTCAGATTGTGAGTACACCACAAGAACCGCCCGCCGCCGCAGCAGCAGCAGCAGCACATCATTTTCTGCACCCGTGA

mRNA sequence

ATGGCCTCCAAATCTCCCCTCTTCCTCTCCCTCTCCCTTCTCCTTACCCTCTCCGTCGTCGCTCTCTCCGATGATCCAGATTGCGTCTACACGGTGTATGTCAGGACCGGCTCCATCCTCAAAGCAGGGACGGATTCGGTGATTAGCGCGACGCTCTACACCGCCAATGGCGACGGAATCCTCATCAGAGATCTGGAGAAATGGGGCGGCTTAATGGGACCTGATTACAACTACTTCGAGAGGGGCAATCTCGACATTTTCAGCGGAAGAGGACCATGCCTGAGCGCACCCGTGTGTTCCTTGAATCTGACCTCCGACGGATCCGGTCCGCACCATGGCTGGTACTGCAACTACTTCGAGGTCACCACAACGGGTGTCCACAGGCCCTGCGATCAAGCCCAGTTCACGGTGGAGCAGTGGTTAGCCCTCGATACATCGCCGTATGTGTTGACCGCCATCCGTGATAACTGCCCCAAGGAATCGATTGGAAGCCGCCGTGATCCAACCCGATCGGGTCCCCTGAGGTTGAAGCAGGAGTGGAGCTTCCACTTCACCGGTCCACCTCCGCCACCAACCATCTCGTGGGTTGTTGGATCCTACCTTCCGGTGGCTTTTCAGATTGTGAGTACACCACAAGAACCGCCCGCCGCCGCAGCAGCAGCAGCAGCACATCATTTTCTGCACCCGTGA

Coding sequence (CDS)

ATGGCCTCCAAATCTCCCCTCTTCCTCTCCCTCTCCCTTCTCCTTACCCTCTCCGTCGTCGCTCTCTCCGATGATCCAGATTGCGTCTACACGGTGTATGTCAGGACCGGCTCCATCCTCAAAGCAGGGACGGATTCGGTGATTAGCGCGACGCTCTACACCGCCAATGGCGACGGAATCCTCATCAGAGATCTGGAGAAATGGGGCGGCTTAATGGGACCTGATTACAACTACTTCGAGAGGGGCAATCTCGACATTTTCAGCGGAAGAGGACCATGCCTGAGCGCACCCGTGTGTTCCTTGAATCTGACCTCCGACGGATCCGGTCCGCACCATGGCTGGTACTGCAACTACTTCGAGGTCACCACAACGGGTGTCCACAGGCCCTGCGATCAAGCCCAGTTCACGGTGGAGCAGTGGTTAGCCCTCGATACATCGCCGTATGTGTTGACCGCCATCCGTGATAACTGCCCCAAGGAATCGATTGGAAGCCGCCGTGATCCAACCCGATCGGGTCCCCTGAGGTTGAAGCAGGAGTGGAGCTTCCACTTCACCGGTCCACCTCCGCCACCAACCATCTCGTGGGTTGTTGGATCCTACCTTCCGGTGGCTTTTCAGATTGTGAGTACACCACAAGAACCGCCCGCCGCCGCAGCAGCAGCAGCAGCACATCATTTTCTGCACCCGTGA

Protein sequence

MASKSPLFLSLSLLLTLSVVALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQEWSFHFTGPPPPPTISWVVGSYLPVAFQIVSTPQEPPAAAAAAAAHHFLHP

Homology

[Close]

BLAST of Csor.00g112090 vs. ExPASy Swiss-Prot
Match: O65660 (PLAT domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=PLAT1 PE=1 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 9.6e-60
Identity = 113/182 (62.09%), Postives = 133/182 (73.08%), Query Frame = 0


Query: 1   MASKSPLFLSLSLLLTLSVVALS-DDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDG 60
           MA +  L   L LL T+S VA + DDPDCVYT Y+RTGSI KAGTDS+ISA +Y  +GD 
Sbjct: 1   MARRDVLLPFLLLLATVSAVAFAEDDPDCVYTFYLRTGSIWKAGTDSIISARIYDKDGDY 60

Query: 61  ILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYF 120
           I I++L+ W GLMGPDYNYFERGNLDIFSGR PCL +P+C+LNLTSDGSG HHGWY NY 
Sbjct: 61  IGIKNLQAWAGLMGPDYNYFERGNLDIFSGRAPCLPSPICALNLTSDGSGDHHGWYVNYV 120

Query: 121 EVTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSG-PLRLKQ 180
           E+TT GVH  C    F +EQWLA DTSPY LTA+R+NCP   +  R   +R G  +R K 
Sbjct: 121 EITTAGVHAQCSTQDFEIEQWLATDTSPYELTAVRNNCP---VKLRDSVSRVGSEIRKKL 179

[Close]

BLAST of Csor.00g112090 vs. ExPASy Swiss-Prot
Match: Q9SIE7 (PLAT domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLAT2 PE=2 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.1e-58
Identity = 112/168 (66.67%), Postives = 130/168 (77.38%), Query Frame = 0


Query: 1   MASKSPLFLSLSLLL-TLSVVALSDD-PDCVYTVYVRTGSILKAGTDSVISATLYTANGD 60
           M  +  LFLSL L++ T+S VAL+DD  DCVYT ++RTGS  KAGTDS+ISA +Y   GD
Sbjct: 2   MPRRDVLFLSLLLVIATVSAVALADDEADCVYTFFLRTGSTFKAGTDSIISARVYDKYGD 61

Query: 61  GILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNY 120
            I IR+LE WGGLMGP YNY+ERGNLDIFSG+ PCL +PVCSLNLTSDGSG HHGWY NY
Sbjct: 62  YIGIRNLEAWGGLMGPGYNYYERGNLDIFSGKAPCLPSPVCSLNLTSDGSGDHHGWYVNY 121

Query: 121 FEVTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCP---KESIG 164
            EVTT GVH  C    F VEQWLA DTSPY L+A+R+NCP   +ES+G
Sbjct: 122 VEVTTAGVHAKCSYQSFDVEQWLASDTSPYELSAVRNNCPVSLRESVG 169

[Close]

BLAST of Csor.00g112090 vs. ExPASy Swiss-Prot
Match: Q2V2V3 (PLAT domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PLAT3 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.8e-34
Identity = 67/104 (64.42%), Postives = 76/104 (73.08%), Query Frame = 0


Query: 48  ISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDG 107
           +S  LY + G   +I DL  WGGLMGP ++YFERGNLDIFSG G CLS PVC++NLTSDG
Sbjct: 1   MSLRLYDSYGQDAVISDLVSWGGLMGPFHDYFERGNLDIFSGLGSCLSGPVCAMNLTSDG 60

Query: 108 SGPHHGWYCNYFEVT-TTGVHRPCDQAQFTVEQWLALDTSPYVL 151
           SG HHGWYCNY EVT +    R C Q +F VEQWLA D SPY L
Sbjct: 61  SGDHHGWYCNYVEVTMSESRRRSCSQEKFEVEQWLARDASPYEL 104

[Close]

BLAST of Csor.00g112090 vs. ExPASy Swiss-Prot
Match: Q8IVV2 (Lipoxygenase homology domain-containing protein 1 OS=Homo sapiens OX=9606 GN=LOXHD1 PE=2 SV=4)

HSP 1 Score: 53.5 bits (127), Expect = 3.6e-06
Identity = 33/108 (30.56%), Postives = 47/108 (43.52%), Query Frame = 0


Query: 30   YTVYVRTGSILKAGTDSVISATLYTANGDG--ILIRDLEKWGGLMGPDYNYFERGNLDIF 89
            YTV V+T  IL AGTD+ +   ++  NGD   + ++    W        N FER N D F
Sbjct: 1681 YTVAVKTSDILGAGTDANVFIIIFGENGDSGTLALKQSANW--------NKFERNNTDTF 1740

Query: 90   SGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTTG----VHRPCD 132
            +         +C L +  D  G   GW+ +Y +V         H  CD
Sbjct: 1741 NFPDMLSLGHLCKLRVWHDNKGIFPGWHLSYVDVKDNSRDETFHFQCD 1780

[Close]

BLAST of Csor.00g112090 vs. ExPASy Swiss-Prot
Match: C8YR32 (Lipoxygenase homology domain-containing protein 1 OS=Mus musculus OX=10090 GN=Loxhd1 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.7e-06
Identity = 30/94 (31.91%), Postives = 44/94 (46.81%), Query Frame = 0


Query: 30   YTVYVRTGSILKAGTDSVISATLYTANGDG--ILIRDLEKWGGLMGPDYNYFERGNLDIF 89
            YTV V+T  IL AGTD+ +   ++  NGD   + ++    W        N FER N D F
Sbjct: 1682 YTVSVKTSDILGAGTDANVFIIIFGENGDSGTLALKQSANW--------NKFERNNTDTF 1741

Query: 90   SGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEV 122
            +         +C L +  D  G   GW+ +Y +V
Sbjct: 1742 NFSDMLSLGHLCKLRVWHDNKGIFPGWHLSYVDV 1767

[Close]

BLAST of Csor.00g112090 vs. NCBI nr
Match: KAG6594872.1 (PLAT domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 473 bits (1218), Expect = 1.28e-168
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MASKSPLFLSLSLLLTLSVVALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI 60
           MASKSPLFLSLSLLLTLSVVALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI
Sbjct: 1   MASKSPLFLSLSLLLTLSVVALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI 60

Query: 61  LIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE 120
           LIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE
Sbjct: 61  LIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE 120

Query: 121 VTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQEW 180
           VTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQEW
Sbjct: 121 VTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQEW 180

Query: 181 SFHFTGPPPPPTISWVVGSYLPVAFQIVSTPQEPPAAAAAAAAHHFLHP 229
           SFHFTGPPPPPTISWVVGSYLPVAFQIVSTPQEPPAAAAAAAAHHFLHP
Sbjct: 181 SFHFTGPPPPPTISWVVGSYLPVAFQIVSTPQEPPAAAAAAAAHHFLHP 229

[Close]

BLAST of Csor.00g112090 vs. NCBI nr
Match: XP_023517016.1 (PLAT domain-containing protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 365 bits (937), Expect = 1.52e-126
Identity = 175/178 (98.31%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 1   MASKSPLFLSLSLLLTLSVVALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI 60
           MASKSPLFL+LSLLL+LS VALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI
Sbjct: 1   MASKSPLFLALSLLLSLSAVALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI 60

Query: 61  LIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE 120
           LIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE
Sbjct: 61  LIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE 120

Query: 121 VTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQ 178
           VTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQ
Sbjct: 121 VTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQ 178

[Close]

BLAST of Csor.00g112090 vs. NCBI nr
Match: XP_023002987.1 (PLAT domain-containing protein 1-like [Cucurbita maxima])

HSP 1 Score: 365 bits (936), Expect = 2.17e-126
Identity = 175/178 (98.31%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MASKSPLFLSLSLLLTLSVVALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI 60
           MASKSPLFLSLSLLL+LSVVALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI
Sbjct: 1   MASKSPLFLSLSLLLSLSVVALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI 60

Query: 61  LIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE 120
           LI+DLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE
Sbjct: 61  LIKDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE 120

Query: 121 VTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQ 178
           VTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIR+NCPKESIGSRRDPTRSGPLRLKQ
Sbjct: 121 VTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRNNCPKESIGSRRDPTRSGPLRLKQ 178

[Close]

BLAST of Csor.00g112090 vs. NCBI nr
Match: XP_022963310.1 (PLAT domain-containing protein 3-like [Cucurbita moschata])

HSP 1 Score: 359 bits (921), Expect = 4.18e-124
Identity = 174/178 (97.75%), Postives = 175/178 (98.31%), Query Frame = 0


Query: 1   MASKSPLFLSLSLLLTLSVVALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI 60
           MASKSPLFLSLSLLL+LSVVAL DDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI
Sbjct: 1   MASKSPLFLSLSLLLSLSVVALYDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI 60

Query: 61  LIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE 120
           LIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE
Sbjct: 61  LIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE 120

Query: 121 VTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQ 178
           VTTTGVHR CDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGP RLKQ
Sbjct: 121 VTTTGVHRLCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGPPRLKQ 178

[Close]

BLAST of Csor.00g112090 vs. NCBI nr
Match: KAG7026837.1 (PLAT domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 332 bits (852), Expect = 6.33e-114
Identity = 154/155 (99.35%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 24  DDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGN 83
            DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGN
Sbjct: 2   QDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGN 61

Query: 84  LDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTTGVHRPCDQAQFTVEQWLAL 143
           LDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTTGVHRPCDQAQFTVEQWLAL
Sbjct: 62  LDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTTGVHRPCDQAQFTVEQWLAL 121

Query: 144 DTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQ 178
           DTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQ
Sbjct: 122 DTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQ 156

[Close]

BLAST of Csor.00g112090 vs. ExPASy TrEMBL
Match: A0A6J1KL50 (PLAT domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111496734 PE=4 SV=1)

HSP 1 Score: 365 bits (936), Expect = 1.05e-126
Identity = 175/178 (98.31%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MASKSPLFLSLSLLLTLSVVALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI 60
           MASKSPLFLSLSLLL+LSVVALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI
Sbjct: 1   MASKSPLFLSLSLLLSLSVVALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI 60

Query: 61  LIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE 120
           LI+DLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE
Sbjct: 61  LIKDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE 120

Query: 121 VTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQ 178
           VTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIR+NCPKESIGSRRDPTRSGPLRLKQ
Sbjct: 121 VTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRNNCPKESIGSRRDPTRSGPLRLKQ 178

[Close]

BLAST of Csor.00g112090 vs. ExPASy TrEMBL
Match: A0A6J1HHM4 (PLAT domain-containing protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111463559 PE=4 SV=1)

HSP 1 Score: 359 bits (921), Expect = 2.03e-124
Identity = 174/178 (97.75%), Postives = 175/178 (98.31%), Query Frame = 0


Query: 1   MASKSPLFLSLSLLLTLSVVALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI 60
           MASKSPLFLSLSLLL+LSVVAL DDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI
Sbjct: 1   MASKSPLFLSLSLLLSLSVVALYDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI 60

Query: 61  LIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE 120
           LIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE
Sbjct: 61  LIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE 120

Query: 121 VTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQ 178
           VTTTGVHR CDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGP RLKQ
Sbjct: 121 VTTTGVHRLCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGPPRLKQ 178

[Close]

BLAST of Csor.00g112090 vs. ExPASy TrEMBL
Match: A0A5A7SYJ2 (Lipoxygenase-like proteiny domain-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002740 PE=4 SV=1)

HSP 1 Score: 283 bits (725), Expect = 1.39e-94
Identity = 142/180 (78.89%), Postives = 151/180 (83.89%), Query Frame = 0


Query: 1   MASKSPLFLSLSLLLTLSVVALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI 60
           MA+KS LF +   LL+ S +A SDDPDCVYTVY+RTGSILKAGTDSVI+ATLYTA GDGI
Sbjct: 1   MATKSTLFFAF--LLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGI 60

Query: 61  LIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE 120
            I DLEKWGG+MGPDYNYFERGNLDIFSGRGPCLS PVCSLNLTSDGSGPHHGWYCNY E
Sbjct: 61  RIIDLEKWGGMMGPDYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVE 120

Query: 121 VTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGP--LRLKQ 178
           VTTTGVHR CDQ  FTVEQWLALD  PY LTAI++NCP  S  SRRD  RSG   L LKQ
Sbjct: 121 VTTTGVHRSCDQQLFTVEQWLALDAPPYSLTAIQNNCPSGSE-SRRDLIRSGGPNLELKQ 177

[Close]

BLAST of Csor.00g112090 vs. ExPASy TrEMBL
Match: A0A1S3B1J7 (lipoxygenase homology domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC103484981 PE=4 SV=1)

HSP 1 Score: 283 bits (725), Expect = 1.39e-94
Identity = 142/180 (78.89%), Postives = 151/180 (83.89%), Query Frame = 0


Query: 1   MASKSPLFLSLSLLLTLSVVALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI 60
           MA+KS LF +   LL+ S +A SDDPDCVYTVY+RTGSILKAGTDSVI+ATLYTA GDGI
Sbjct: 1   MATKSTLFFAF--LLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGI 60

Query: 61  LIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE 120
            I DLEKWGG+MGPDYNYFERGNLDIFSGRGPCLS PVCSLNLTSDGSGPHHGWYCNY E
Sbjct: 61  RIIDLEKWGGMMGPDYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVE 120

Query: 121 VTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGP--LRLKQ 178
           VTTTGVHR CDQ  FTVEQWLALD  PY LTAI++NCP  S  SRRD  RSG   L LKQ
Sbjct: 121 VTTTGVHRSCDQQLFTVEQWLALDAPPYSLTAIQNNCPSGSE-SRRDLIRSGGPNLELKQ 177

[Close]

BLAST of Csor.00g112090 vs. ExPASy TrEMBL
Match: A0A6J1BWF9 (PLAT domain-containing protein 3-like OS=Momordica charantia OX=3673 GN=LOC111005348 PE=4 SV=1)

HSP 1 Score: 281 bits (718), Expect = 1.67e-93
Identity = 139/173 (80.35%), Postives = 148/173 (85.55%), Query Frame = 0


Query: 1   MASKSPLFLSLSLLLTLSVVALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI 60
           MASKS L LSLS+LL+ S++ALSDD  CVY VYVRTGS  K GTDSVIS TLYTA GDG+
Sbjct: 4   MASKSALLLSLSILLSFSLIALSDD--CVYXVYVRTGSTPKGGTDSVISVTLYTAQGDGV 63

Query: 61  LIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE 120
            IRDLEKWGGLMGP Y+YFERGNLDIFSGRGPCLS PVCSLNLTSDGSGPHHGWYCNY E
Sbjct: 64  RIRDLEKWGGLMGPGYDYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVE 123

Query: 121 VTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGS--RRDPTRS 171
           VTTTGVHR CDQAQF VEQWLALDTSPY LTAIR+ CPK ++ S  RRD  RS
Sbjct: 124 VTTTGVHRSCDQAQFEVEQWLALDTSPYELTAIRNYCPKSTVSSDGRRDLIRS 174

[Close]

BLAST of Csor.00g112090 vs. TAIR 10
Match: AT4G39730.1 (Lipase/lipooxygenase, PLAT/LH2 family protein )

HSP 1 Score: 231.5 bits (589), Expect = 6.8e-61
Identity = 113/182 (62.09%), Postives = 133/182 (73.08%), Query Frame = 0


Query: 1   MASKSPLFLSLSLLLTLSVVALS-DDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDG 60
           MA +  L   L LL T+S VA + DDPDCVYT Y+RTGSI KAGTDS+ISA +Y  +GD 
Sbjct: 1   MARRDVLLPFLLLLATVSAVAFAEDDPDCVYTFYLRTGSIWKAGTDSIISARIYDKDGDY 60

Query: 61  ILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYF 120
           I I++L+ W GLMGPDYNYFERGNLDIFSGR PCL +P+C+LNLTSDGSG HHGWY NY 
Sbjct: 61  IGIKNLQAWAGLMGPDYNYFERGNLDIFSGRAPCLPSPICALNLTSDGSGDHHGWYVNYV 120

Query: 121 EVTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSG-PLRLKQ 180
           E+TT GVH  C    F +EQWLA DTSPY LTA+R+NCP   +  R   +R G  +R K 
Sbjct: 121 EITTAGVHAQCSTQDFEIEQWLATDTSPYELTAVRNNCP---VKLRDSVSRVGSEIRKKL 179

[Close]

BLAST of Csor.00g112090 vs. TAIR 10
Match: AT2G22170.1 (Lipase/lipooxygenase, PLAT/LH2 family protein )

HSP 1 Score: 228.0 bits (580), Expect = 7.6e-60
Identity = 112/168 (66.67%), Postives = 130/168 (77.38%), Query Frame = 0


Query: 1   MASKSPLFLSLSLLL-TLSVVALSDD-PDCVYTVYVRTGSILKAGTDSVISATLYTANGD 60
           M  +  LFLSL L++ T+S VAL+DD  DCVYT ++RTGS  KAGTDS+ISA +Y   GD
Sbjct: 2   MPRRDVLFLSLLLVIATVSAVALADDEADCVYTFFLRTGSTFKAGTDSIISARVYDKYGD 61

Query: 61  GILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNY 120
            I IR+LE WGGLMGP YNY+ERGNLDIFSG+ PCL +PVCSLNLTSDGSG HHGWY NY
Sbjct: 62  YIGIRNLEAWGGLMGPGYNYYERGNLDIFSGKAPCLPSPVCSLNLTSDGSGDHHGWYVNY 121

Query: 121 FEVTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCP---KESIG 164
            EVTT GVH  C    F VEQWLA DTSPY L+A+R+NCP   +ES+G
Sbjct: 122 VEVTTAGVHAKCSYQSFDVEQWLASDTSPYELSAVRNNCPVSLRESVG 169

[Close]

BLAST of Csor.00g112090 vs. TAIR 10
Match: AT5G65158.1 (Lipase/lipooxygenase, PLAT/LH2 family protein )

HSP 1 Score: 147.5 bits (371), Expect = 1.3e-35
Identity = 67/104 (64.42%), Postives = 76/104 (73.08%), Query Frame = 0


Query: 48  ISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDG 107
           +S  LY + G   +I DL  WGGLMGP ++YFERGNLDIFSG G CLS PVC++NLTSDG
Sbjct: 1   MSLRLYDSYGQDAVISDLVSWGGLMGPFHDYFERGNLDIFSGLGSCLSGPVCAMNLTSDG 60

Query: 108 SGPHHGWYCNYFEVT-TTGVHRPCDQAQFTVEQWLALDTSPYVL 151
           SG HHGWYCNY EVT +    R C Q +F VEQWLA D SPY L
Sbjct: 61  SGDHHGWYCNYVEVTMSESRRRSCSQEKFEVEQWLARDASPYEL 104

The following BLAST results are available for this feature:

BLAST of Csor.00g112090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65660	9.6e-60	62.09	PLAT domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=PLAT1 PE=1 S...	[more]
Q9SIE7	1.1e-58	66.67	PLAT domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLAT2 PE=2 S...	[more]
Q2V2V3	1.8e-34	64.42	PLAT domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PLAT3 PE=4 S...	[more]
Q8IVV2	3.6e-06	30.56	Lipoxygenase homology domain-containing protein 1 OS=Homo sapiens OX=9606 GN=LOX...	[more]
C8YR32	4.7e-06	31.91	Lipoxygenase homology domain-containing protein 1 OS=Mus musculus OX=10090 GN=Lo...	[more]

BLAST of Csor.00g112090 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6594872.1	1.28e-168	100.00	PLAT domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_023517016.1	1.52e-126	98.31	PLAT domain-containing protein 3 [Cucurbita pepo subsp. pepo]	[more]
XP_023002987.1	2.17e-126	98.31	PLAT domain-containing protein 1-like [Cucurbita maxima]	[more]
XP_022963310.1	4.18e-124	97.75	PLAT domain-containing protein 3-like [Cucurbita moschata]	[more]
KAG7026837.1	6.33e-114	99.35	PLAT domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyros...	[more]

BLAST of Csor.00g112090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KL50	1.05e-126	98.31	PLAT domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC11149673...	[more]
A0A6J1HHM4	2.03e-124	97.75	PLAT domain-containing protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111463...	[more]
A0A5A7SYJ2	1.39e-94	78.89	Lipoxygenase-like proteiny domain-containing protein 1 OS=Cucumis melo var. maku...	[more]
A0A1S3B1J7	1.39e-94	78.89	lipoxygenase homology domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1BWF9	1.67e-93	80.35	PLAT domain-containing protein 3-like OS=Momordica charantia OX=3673 GN=LOC11100...	[more]

BLAST of Csor.00g112090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39730.1	6.8e-61	62.09	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]
AT2G22170.1	7.6e-60	66.67	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]
AT5G65158.1	1.3e-35	64.42	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.60.20	PLAT/LH2 domain	coord: 29..146 e-value: 1.1E-18 score: 69.5
None	No IPR available	PANTHER	PTHR31718	FAMILY NOT NAMED	coord: 2..160
None	No IPR available	PANTHER	PTHR31718:SF48	PLAT-PLANT-STRESS PROTEIN	coord: 2..160
None	No IPR available	CDD	cd01754	PLAT_plant_stress	coord: 28..156 e-value: 4.84643E-77 score: 226.268
IPR001024	PLAT/LH2 domain	PFAM	PF01477	PLAT	coord: 30..147 e-value: 4.9E-13 score: 49.7
IPR001024	PLAT/LH2 domain	PROSITE	PS50095	PLAT	coord: 28..155 score: 22.061459
IPR036392	PLAT/LH2 domain superfamily	SUPERFAMILY	49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 29..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g112090.m01	Csor.00g112090.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005515	protein binding