Csor.00g111130 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g111130
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr07: 2842012 .. 2844841 (-)
RNA-Seq ExpressionCsor.00g111130
SyntenyCsor.00g111130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTTGGTGAGTTGGGTAATGGGTACTTATAATGGGATCAGAAGGAACGTAATATTGGAGTACGAACTGAAAGCTCTATCTGCGCAAAACGTGTAAGATCTGCAAAACCCACTCTCTGATCGGGAGATGTGTATTTATTTTAATATTGATTTTGTTCATCAAAAAGGAGCTTGAAACTTTAATTCCATCTCTTTAATTCTGAGTTTCTGACCTCAGGATTCAGGGACGGTCAGAGTTGGCCACGATGACCGGTTTGGGCCGGGTTCTTTTTTTTTTTTTTTTTTTTTTTCCTCTTTTCAGAATAGAAAGCTGACGTGGACACGTAATTTTGGGATGGGACTCAAAGTTGACGGTTGATTCCAACCTATTCTGCCTACGCCAAGACATATGCGCTACGCCTACCCTTTCATCTCTCTTTTCCCTTTTACCCTTGTGAAAATTTTTAACCCAATGTGATGTTATAATTATTTCATTAATTACTATGTTTTTGTGAAATTTAAATAGTGTTTATTAGGTTGAAAATTGTTAGTAATGAGTTACACGTTAGCTAATTTAAATAATTATCATGAGTTCATAAGGACATTAAAAAAAAATTACGAGTGTTTATGCTTAAAATGAACAATATCAAGATCCTCGATCATATTAGACTTATAAACTTTCATAATTGGTCTCGTGAATTCAAAATCTTCTAAAAATGGAACAAGATTAAATATCTTGTAATAACTCTTAAAAGTTGAGGGGAGTTTCTTAGGTGTGAATAACTTTTAAATGTAGATAAGATTTATTTACGTTTGTAATATTTAAGGATAGAAATAAAATTTTATTAACTTTATTTATAAATTTTCGATCTTTATTTTAATTAGATAATATAGTACAATTCTACTCAATAATTTTCAACAATGATACGGTGAAATTTTATGAATCCCTCGTGTACACGCCTTTCTTTTAGTTAGGCATCTAGAAAATGTTATTTTACCAAACAAGAAAAAAAAATAATCATTAAAACCGTCCAATTTCTTATTGAAACGTATTAACAAAAAAAGTCAACTCCCAACCATATTGACTAAGATTTTTCAACGCCAAACACACAAACGCGTATGCCGGTGTTCCATGATGCCATCATTAATCGATCTATATGTGAATGGTCGTGGCTGCCATGTTTAAATTATAACTTCAACTAAGCACATATCAAGTTTATTTTTTCATTTTTTTTTTTAACAAAATCGATGTAATATTATAAAACTTAAAACTAATATAATATTTGTTGAGTTTTATACGTTTTATACCATACAAAATAAACATTTACAGAATATTTTGACGATAATAAAGCTATGCATGTGCCTCTTGATACAATATTATTTTAATTTCAAGCTAATTCTTATACCATAAGCTAAACCTTCAAATCAAAATAAAGGTAATTATGAACAAAAAAATGATAAAATAATGAAAAAATGAGTATAATTGTAAATGTTAGATTATGAAAATATTTTTATAAATATTTTCTTTCAATATATTTTCGTGGATTCTTGTTTGGGCATGTTGATAATGAAACTCTAAACCAAGATTGGGCTTTTAAAATGAAATGATTGGGCCTGAGACCGTACAAGCCCAGTTGCTTTGAAACAAGGTTTATGAAGGCCGTCTATATTTTCGAATACGGCCAGTTTAATTCTGGATGCGACAGAGCACGGTTCCTATGTACTTTCAGCCACTAAATAATTACAAAAATAACGATAAAGATTGCCTTATTTAAAACTGCCAATTCCAAGTCAACGTACAAGTGGAAGCCCCACCTTATCCAAATAAATAAAAATAATATAAAATCCCACTTTTCGGTTTAAATTAATTTAAGGAGTTTGTTTTAAATTATTTTTATGGAGTAATTTAATTAACCGATTTTGTTTGTTTGGTTACTCTTCTTAAAAATTGTTTTGATCACGGCATCTCATTCTTATCTAAAAAAACAACAATATATAATAATAAATAAATGTCCTAATCTTTTAACATTTGACTTTTTTTTTATAAATAGTGACACTAATACATATATATTTTTTTTCGCGTTACAAAATTCTAAAATTCAGTTGAAATAAAAAAATAGTTTAGAAAAAGAGAGGGACAAAAAGGGGTTAGTCAAATTGTGCGGTTCTGTTGAGGAGGAATAGAAGTGGCGCCACCCAAATTGGGGACTCGGCGGCATCTTCGCATCTCGCCAACGAATCACTCTCCCTCGCTCTCTCGTTTTGTAGGTTGCGCCATATAAATTCATTTTCGTTGAACTTGAAGCTCTCTCTTCTCGTGGGGGTCTCCAACATCACATCGGAAAATCATCTACGGGACCCTTCCCCCTTCGTAATTTTGTGGTTACATTTCTTGTTTTCACCTACTGTCATACATTTTTTGTTGTTGTTTTCCTTTCTAACTTCATCGTCTTCTCCTTGTTGCAGGATTCTGTCCGGTAGTTTTCACCTTTTTTTCCCTTGCTGCTGCTGGAGGGGACCAGGGTTTACTTCTTCTGGGCATCTCTATTCTGCTGCCCTTCTTCCAATTCTTCGTAATTTCCCTTTCTTTCTTCTGCAATTCTCGGCGTTTTGATTCATCGCGTTTTGGCGTCTAATTTTTACCTGTGTTGTTGCATTTTGATTTAATCGATTTCAAGATTTGGATTGTCATATGACGATGCGAAATAAGAGGTTTATGGTGTTGTTTGAGGCAATTTTCAATTGTTTGTTACTATTTTGAATTGATTGGCTTGAGAGGAAGAACATAGGTTTGGTTATCGATCAAAGCGTGTTGTTCATTTGGTTGAGTAGGGGATGGATGCGTATGA

mRNA sequence

ATGAAGTTGGTGAGTTGGGTAATGGGTACTTATAATGGGATCAGAAGGAACGTAATATTGGAGTACGAACTGAAAGCTCTATCTGCGCAAAACGTGTTGCGCCATATAAATTCATTTTCGTTGAACTTGAAGCTCTCTCTTCTCGTGGGGGTCTCCAACATCACATCGGAAAATCATCTACGGGACCCTTCCCCCTTCGTAATTTTGTGGATTCTGTCCGGTAGTTTTCACCTTTTTTTCCCTTGCTGCTGCTGGAGGGGACCAGGGTTTACTTCTTCTGGGCATCTCTATTCTGCTGCCCTTCTTCCAATTCTTCGGGATGGATGCGTATGA

Coding sequence (CDS)

ATGAAGTTGGTGAGTTGGGTAATGGGTACTTATAATGGGATCAGAAGGAACGTAATATTGGAGTACGAACTGAAAGCTCTATCTGCGCAAAACGTGTTGCGCCATATAAATTCATTTTCGTTGAACTTGAAGCTCTCTCTTCTCGTGGGGGTCTCCAACATCACATCGGAAAATCATCTACGGGACCCTTCCCCCTTCGTAATTTTGTGGATTCTGTCCGGTAGTTTTCACCTTTTTTTCCCTTGCTGCTGCTGGAGGGGACCAGGGTTTACTTCTTCTGGGCATCTCTATTCTGCTGCCCTTCTTCCAATTCTTCGGGATGGATGCGTATGA

Protein sequence

MKLVSWVMGTYNGIRRNVILEYELKALSAQNVLRHINSFSLNLKLSLLVGVSNITSENHLRDPSPFVILWILSGSFHLFFPCCCWRGPGFTSSGHLYSAALLPILRDGCV
Homology
[Close]
BLAST of Csor.00g111130 vs. NCBI nr
Match: KAG6594968.1 (hypothetical protein SDJN03_11521, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 230 bits (586), Expect = 3.76e-76
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MKLVSWVMGTYNGIRRNVILEYELKALSAQNVLRHINSFSLNLKLSLLVGVSNITSENHL 60
           MKLVSWVMGTYNGIRRNVILEYELKALSAQNVLRHINSFSLNLKLSLLVGVSNITSENHL
Sbjct: 1   MKLVSWVMGTYNGIRRNVILEYELKALSAQNVLRHINSFSLNLKLSLLVGVSNITSENHL 60

Query: 61  RDPSPFVILWILSGSFHLFFPCCCWRGPGFTSSGHLYSAALLPILRDGCV 110
           RDPSPFVILWILSGSFHLFFPCCCWRGPGFTSSGHLYSAALLPILRDGCV
Sbjct: 61  RDPSPFVILWILSGSFHLFFPCCCWRGPGFTSSGHLYSAALLPILRDGCV 110

[Close]
BLAST of Csor.00g111130 vs. NCBI nr
Match: KAG6604120.1 (hypothetical protein SDJN03_04729, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 62.4 bits (150), Expect = 4.81e-10
Identity = 41/100 (41.00%), Postives = 54/100 (54.00%), Query Frame = 0 

Query: 8  MGTYNGIRRNVILEYELKALSAQNV-------LR----------------HINSFSLNLK 67
          MGT+NGIRRNVIL+Y+LK LSA+NV       LR                H+++ S +L 
Sbjct: 1  MGTHNGIRRNVILDYQLKPLSARNVSSNLNKALRFEVAPPNIDLGIFASTHLDNESPSLS 60

Query: 68 LSLLVGVSNITSENHLRDPSPFVILWILSGSFHLFFPCCC 84
          LSLLVG+SNI   +     SP +++          FPCCC
Sbjct: 61 LSLLVGISNIGISSSFSGFSPLILI---------VFPCCC 91

The following BLAST results are available for this feature:
BLAST of Csor.00g111130 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g111130 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6594968.13.76e-76100.00hypothetical protein SDJN03_11521, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6604120.14.81e-1041.00hypothetical protein SDJN03_04729, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g111130 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g111130 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g111130.m01Csor.00g111130.m01mRNA