Csor.00g111090 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g111090
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial
Location	Csor_Chr07: 2854914 .. 2857941 (-)
RNA-Seq Expression	Csor.00g111090
Synteny	Csor.00g111090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAACTCCTTGCAGAGAATCTGGAACCGCGGGTGTGCTCTCCGTGGTACTATGGCTCCTCTTTGCAGGTCATTCTCCGCCGACTCTTTGGTTGAAGTCAAGCCCGGCGAGATCGGTATGGTCTCCGGAATTCCCGAGGAACACCTTACCAGAAGGGTATTGTCCAGCATTCATCTGCTCTAGTATTTATCAACGAGTTTCTAATTGTTTACGTTGTGGTTTAGTTTAGACGGAGCGAGTTATTGGATGGTATTGATGATTTTTGGGGATTAGGTATATTTATACCCGTCTGGTTGACAGTTCTTGCTTGTTTTTACCTGGGTCTTTCAGAATGGTCTGCTGTGGCTAAACCCTTTAGGTGTTACTTTGTTGCTTCTATGTCGAAATGTAGTCGGTTTCGATAAGGAGATGGAAAATTCCGGCTGATTTAGCACTACGACGCTACATTTAGTATGAATAGGCTCTTGATCACCAAAAATTGATTAAAATAAAGTAAAAAGTGTAGAGGAGCCCAAGGTTTAATCACAAAGAACAACTGCACCTTGGCCATTCCTTTTCTTATCCTACGGGATATTGCTATCGGTTATCCAAATCAGTTGCTAGGGAGAAATCCGTTCTTTTATGTTGATTTCACAAAAGGCTTTATCAATTACTATCTCATAGTCTCTATAAGTTATTCAGGAGCAATTGTTTAGCTTTTCATTTTGTTCCGTATAAAAGGCAAATGTTGGGATTTTTTAAAAAATTATATATTTATTGGATTTAATTTCTTCGGGATTGGATTTTACATGAATTGAGGTTTAACCTTGTAATTTTGATGTGCAAACCACTAACTGTGGATTTCCCCATAACATTAATCCTTTTTATATGACAATCCTGATTCATTTGTCTTCCTATCATGAAATACGTCAGGTTGTAATCTACTCTCCGGCTAGAACTGCATCCCAGCAAGGATCAGGAAAGGTTGGCAAGTGGAAAATCAACTTTATGTCAACACAAAAGTATGAATTCTTCCTTTTCGTTATTTCCCGAGTTTTACTTTTAAAAAAATCGAACTGCTGCTTCATTAGATAACAGAATTTTTTAAGTCGGTTCTAGCAGATTCCTAGGAGTTGAAATATTGTGCACAACATGTTATACTGGGCAATTCAAGTGCCCAAAGTTAATGACCCTTGTTCTCTTACTCTCATCAATTAGATTCGTTTTTCCGCTTATAGTTTCTGTCATTTTGGATTTTTGTTTCTCTGATAAGGCACCTTTTGTGGTGGATTTGTTCGTTTTTGTATTCCGTGTGTAGTATGTCAGTTATTTTCATAAAAGATTGGTTTCTCATTTAAGAAAGAAAAACATACAAACAGAAGAGTGAAGAGTTTTCTTATGCTTATTGTCATGTTTGTAGGTGGGAAAACCCATTGATGGGATGGACTTCTACTGGAGACCCCTACGCCAATGTAGGGGACTCTGCGCTATCTTTTGACAGTGAAGAAGCTGCAAAGGCATTTGCTGAGAAACATGGATGGGAATATGTGGTAACGTTTCGTTAACCATTTAGAGAGAATTTTCTTCTTGTAATTCCCTTTATGTAGTTTGAGGTGTCATATTTTAGGTTAGTTATAAACTGTGTTATTTTTTGTGTGTCCGTTGCCTTCAAATCAGTAACAATTACAGTTGGAGGTGTTGATAAATTGTGCGTATATTCTAATATATTCTTTACAATAGATCTTTGCCTTCCCTCAAGGTCAAAACAATCCAGTCTGATTCAAAAGTGAAATTGCCATTGGATATGATTGTTTAATATGTTTATTTAGAATAACAAAGATGATTCATGATTTCTGCATTTGGGCTATTATATGTTTGGCGTTTGACTCTGAATGTAAGTTCTTATATTTTAAGATAGTGGAAATAAGTTCGGCTATTTAATCTTCTAGTATTAGTTTGAAGCTAGAATTCAGAAATTTGAGGGGGAAGAAATGCCAGTATTTCTTCCAAATTTGGTCCATTAGTTGCAGAAAGTTCAAGCTTCTTATTTAGCTTTCTGTTGGCATTGCTTTACAATTTTATCATTATCTGGGGAGTGGACTCTTAATGGACGTTTTTTTTAAAGTTGTTTCTTTAATGTTCAGATTTAGGAATCACTTTTCTGGTCTGCATTATTATGATATTACACGGAGAGACAGTCCACATGCTTCTGGTTAATTCTCATTCTTATGTTGATTGTGTTTCTTGATTCTTTTTTGCCCCCTTTTTCTCCATTTTGTAGGTTAAGAAGCGCCACACACCACTTTTGAAGGTTTGAAATTCTTTCCCATTAATAATTTCATGAGCTTGTATTTTGTCTATGGTTCTGTGACTGTATTTTTGAGAGATGAGGGACCACGCTGAAGCTAAGAATGATTCATCCATTAAGCTCTCTGTCACATATCCTAGCTTCGACTATTTTCAAGGACTGTTCCTTCGTGTTAAATTTTATTCCTTTGTTTTAATGGCCACTTCTTTCATCGTCTTTTGCAGTTCTGCTGGCATTTTATTTTCAATTTTATTTGTTTCGTCCAATTTTTGTTGCCTTCAGGACATTTCGTTTGAGATTTCTCAATCCTTTGGCAATCTAGAGTCTTCTTGTAGCTAGTTTAAGGAGCTCAGTTTCAGTTTCATTTCGGTACCAATTGTTGTTTTGTTGTAGTATACATAATTCTTTCCCAAACGACGTTATATGAACTTGGGTTGTTACGATTGGAGTATTTAGATGTTCTAACAGCTAAGAGCTCCTTTATGATAGATAAGGAGGATGAAGATCTGACAAAGGTTTTTAAAGTCTGTTAGCATTAGTTGATGAAGGAATTTTGATGCTACTTGTTTTCTTCATGTCATCTAACTAATGACATTCCGTGAATCTTGGCTGTTTAGTTCACCATGAGCATTCTAAAATAAAGAAACAGAAAAAACTAACTCCCTGTTTTGGCTTTAGGCGAAGGCATATGCTGACAATTTCAAATGGAAGGGCCATCCTGAACCCAAGGAGGCGTAA

mRNA sequence

ATGGCTAACTCCTTGCAGAGAATCTGGAACCGCGGGTGTGCTCTCCGTGGTACTATGGCTCCTCTTTGCAGGTCATTCTCCGCCGACTCTTTGGTTGAAGTCAAGCCCGGCGAGATCGGTATGGTCTCCGGAATTCCCGAGGAACACCTTACCAGAAGGGTTGTAATCTACTCTCCGGCTAGAACTGCATCCCAGCAAGGATCAGGAAAGGTTGGCAAGTGGAAAATCAACTTTATGTCAACACAAAAGTGGGAAAACCCATTGATGGGATGGACTTCTACTGGAGACCCCTACGCCAATGTAGGGGACTCTGCGCTATCTTTTGACAGTGAAGAAGCTGCAAAGGCATTTGCTGAGAAACATGGATGGGAATATGTGGTTAAGAAGCGCCACACACCACTTTTGAAGGCGAAGGCATATGCTGACAATTTCAAATGGAAGGGCCATCCTGAACCCAAGGAGGCGTAA

Coding sequence (CDS)

ATGGCTAACTCCTTGCAGAGAATCTGGAACCGCGGGTGTGCTCTCCGTGGTACTATGGCTCCTCTTTGCAGGTCATTCTCCGCCGACTCTTTGGTTGAAGTCAAGCCCGGCGAGATCGGTATGGTCTCCGGAATTCCCGAGGAACACCTTACCAGAAGGGTTGTAATCTACTCTCCGGCTAGAACTGCATCCCAGCAAGGATCAGGAAAGGTTGGCAAGTGGAAAATCAACTTTATGTCAACACAAAAGTGGGAAAACCCATTGATGGGATGGACTTCTACTGGAGACCCCTACGCCAATGTAGGGGACTCTGCGCTATCTTTTGACAGTGAAGAAGCTGCAAAGGCATTTGCTGAGAAACATGGATGGGAATATGTGGTTAAGAAGCGCCACACACCACTTTTGAAGGCGAAGGCATATGCTGACAATTTCAAATGGAAGGGCCATCCTGAACCCAAGGAGGCGTAA

Protein sequence

MANSLQRIWNRGCALRGTMAPLCRSFSADSLVEVKPGEIGMVSGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLKAKAYADNFKWKGHPEPKEA

Homology

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BLAST of Csor.00g111090 vs. ExPASy Swiss-Prot
Match: Q9FJW4 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=FRO1 PE=1 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 2.3e-57
Identity = 103/145 (71.03%), Postives = 125/145 (86.21%), Query Frame = 0


Query: 11  RGCALRGTMAPLCRSFSADSLVE--VKPGEIGMVSGIPEEHLTRRVVIYSPARTASQQGS 70
           R   +  T+  + R F+ D++VE   K GEIG VSGIPEEHL+R+V+IYSPARTA+Q GS
Sbjct: 9   RTIRIAATLRRVARPFATDAVVESDYKRGEIGKVSGIPEEHLSRKVIIYSPARTATQSGS 68

Query: 71  GKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEKHGWEYVVK 130
           GK+GKWKINF+ST KWENPLMGWTSTGDPYANVGDSAL+FDSEEAAK+FAE+HGW+Y VK
Sbjct: 69  GKLGKWKINFVSTLKWENPLMGWTSTGDPYANVGDSALAFDSEEAAKSFAERHGWDYKVK 128

Query: 131 KRHTPLLKAKAYADNFKWKGHPEPK 154
           K +TPLLK K+Y+DNFKWKG+P+P+
Sbjct: 129 KPNTPLLKVKSYSDNFKWKGNPQPE 153

[Close]

BLAST of Csor.00g111090 vs. ExPASy Swiss-Prot
Match: Q5XIF3 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs4 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 8.9e-25
Identity = 56/121 (46.28%), Postives = 77/121 (63.64%), Query Frame = 0


Query: 27  SADSLVEVKPGEIGMVSGIPEEHL-TRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWE 86
           + D  ++V P     ++G+PEEH+ TR+V I+ PAR   Q G     KWK+ F + ++WE
Sbjct: 54  TVDEKLDVTP-----LTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWE 113

Query: 87  NPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLKAKAYADNFK 146
           NPLMGW ST DP +N+    L+F ++E A AFAEKHGW Y V+ R  P  K+K+Y  NF 
Sbjct: 114 NPLMGWASTADPLSNM---VLTFSAKEDAVAFAEKHGWSYDVEGRKVPKPKSKSYGANFS 166

[Close]

BLAST of Csor.00g111090 vs. ExPASy Swiss-Prot
Match: Q02375 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Bos taurus OX=9913 GN=NDUFS4 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.4e-24
Identity = 52/110 (47.27%), Postives = 73/110 (66.36%), Query Frame = 0


Query: 38  EIGMVSGIPEEHL-TRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGD 97
           +I  ++G+PEEH+ TR+  I+ PAR   Q G     KWK+ F + ++WENPLMGW ST D
Sbjct: 60  DITTITGVPEEHIKTRKARIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTAD 119

Query: 98  PYANVGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLKAKAYADNFKW 147
           P +N+    L+F ++E A AFAEK+GW Y V++R  P  K+K+Y  NF W
Sbjct: 120 PLSNL---VLTFSTKEDAVAFAEKNGWSYDVEERKVPKPKSKSYGANFSW 166

[Close]

BLAST of Csor.00g111090 vs. ExPASy Swiss-Prot
Match: Q66XS7 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Gekko japonicus OX=146911 GN=NDUFS4 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 5.8e-24
Identity = 52/110 (47.27%), Postives = 75/110 (68.18%), Query Frame = 0


Query: 38  EIGMVSGIPEEHL-TRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGD 97
           +I  ++G+PEEH+ TR+V I+ PAR   Q G     KWK+ F + ++WENPLMGW+ST D
Sbjct: 60  DITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWSSTAD 119

Query: 98  PYANVGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLKAKAYADNFKW 147
           P +N+    L+F ++E A AFAEK+GW + V++R  P  K+K+Y  NF W
Sbjct: 120 PLSNL---VLTFSTKEDAVAFAEKNGWSFDVEERKVPKPKSKSYGANFSW 166

[Close]

BLAST of Csor.00g111090 vs. ExPASy Swiss-Prot
Match: Q0MQH0 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Gorilla gorilla gorilla OX=9595 GN=NDUFS4 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 7.5e-24
Identity = 51/110 (46.36%), Postives = 74/110 (67.27%), Query Frame = 0


Query: 38  EIGMVSGIPEEHL-TRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGD 97
           +I  ++G+PEEH+ TR+V I+ PAR   Q G     KWK+ F + ++WENPLMGW ST D
Sbjct: 60  DITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTAD 119

Query: 98  PYANVGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLKAKAYADNFKW 147
           P +N+    L+F ++E A +FAEK+GW Y +++R  P  K+K+Y  NF W
Sbjct: 120 PLSNM---VLTFSTKEDAVSFAEKNGWSYDIEERKVPKPKSKSYGANFSW 166

[Close]

BLAST of Csor.00g111090 vs. NCBI nr
Match: XP_022962977.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucurbita moschata] >XP_022962978.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucurbita moschata] >XP_023003205.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucurbita maxima] >XP_023517797.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucurbita pepo subsp. pepo] >KAG6594972.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 324 bits (831), Expect = 4.63e-112
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MANSLQRIWNRGCALRGTMAPLCRSFSADSLVEVKPGEIGMVSGIPEEHLTRRVVIYSPA 60
           MANSLQRIWNRGCALRGTMAPLCRSFSADSLVEVKPGEIGMVSGIPEEHLTRRVVIYSPA
Sbjct: 1   MANSLQRIWNRGCALRGTMAPLCRSFSADSLVEVKPGEIGMVSGIPEEHLTRRVVIYSPA 60

Query: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEK 120
           RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEK
Sbjct: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEK 120

Query: 121 HGWEYVVKKRHTPLLKAKAYADNFKWKGHPEPKEA 155
           HGWEYVVKKRHTPLLKAKAYADNFKWKGHPEPKEA
Sbjct: 121 HGWEYVVKKRHTPLLKAKAYADNFKWKGHPEPKEA 155

[Close]

BLAST of Csor.00g111090 vs. NCBI nr
Match: XP_022132610.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Momordica charantia])

HSP 1 Score: 306 bits (783), Expect = 9.70e-105
Identity = 146/155 (94.19%), Postives = 149/155 (96.13%), Query Frame = 0


Query: 1   MANSLQRIWNRGCALRGTMAPLCRSFSADSLVEVKPGEIGMVSGIPEEHLTRRVVIYSPA 60
           MANSLQRIWN  C LRGT+APLCRSFSADSLV+VKPGEIGMVSGIPEEHLTRRVVIYSPA
Sbjct: 1   MANSLQRIWNHRCGLRGTLAPLCRSFSADSLVQVKPGEIGMVSGIPEEHLTRRVVIYSPA 60

Query: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEK 120
           RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEK
Sbjct: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEK 120

Query: 121 HGWEYVVKKRHTPLLKAKAYADNFKWKGHPEPKEA 155
           HGW+YVVKKRHTPLLK KAYADNFKWKG PE KEA
Sbjct: 121 HGWDYVVKKRHTPLLKVKAYADNFKWKGPPEAKEA 155

[Close]

BLAST of Csor.00g111090 vs. NCBI nr
Match: XP_038881462.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Benincasa hispida])

HSP 1 Score: 306 bits (783), Expect = 9.70e-105
Identity = 145/155 (93.55%), Postives = 150/155 (96.77%), Query Frame = 0


Query: 1   MANSLQRIWNRGCALRGTMAPLCRSFSADSLVEVKPGEIGMVSGIPEEHLTRRVVIYSPA 60
           MANSLQRIW+ GCALRGT+APLCRSFS DSLV+VKPGEIGMVSGIPEEHLTRRV+IYSPA
Sbjct: 1   MANSLQRIWSHGCALRGTVAPLCRSFSTDSLVQVKPGEIGMVSGIPEEHLTRRVIIYSPA 60

Query: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEK 120
           RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEK
Sbjct: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEK 120

Query: 121 HGWEYVVKKRHTPLLKAKAYADNFKWKGHPEPKEA 155
           HGWEYVV+KRHTPLLK KAYADNFKWKG PE KEA
Sbjct: 121 HGWEYVVQKRHTPLLKVKAYADNFKWKGPPEAKEA 155

[Close]

BLAST of Csor.00g111090 vs. NCBI nr
Match: XP_022977437.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 300 bits (767), Expect = 2.67e-102
Identity = 142/155 (91.61%), Postives = 149/155 (96.13%), Query Frame = 0


Query: 1   MANSLQRIWNRGCALRGTMAPLCRSFSADSLVEVKPGEIGMVSGIPEEHLTRRVVIYSPA 60
           MANSLQRIW+   ALRGT+APLCRSFS+DSLV++KPGEIGMVSGIP+EHLTRRVVIYSPA
Sbjct: 1   MANSLQRIWSNSRALRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60

Query: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEK 120
           RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAK FA+K
Sbjct: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120

Query: 121 HGWEYVVKKRHTPLLKAKAYADNFKWKGHPEPKEA 155
           HGWEYVVKKRHTPLLK KAYADNFKWKGHPE KEA
Sbjct: 121 HGWEYVVKKRHTPLLKVKAYADNFKWKGHPEAKEA 155

[Close]

BLAST of Csor.00g111090 vs. NCBI nr
Match: XP_022950018.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucurbita moschata] >KAG6604122.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 299 bits (765), Expect = 5.40e-102
Identity = 141/155 (90.97%), Postives = 149/155 (96.13%), Query Frame = 0


Query: 1   MANSLQRIWNRGCALRGTMAPLCRSFSADSLVEVKPGEIGMVSGIPEEHLTRRVVIYSPA 60
           MANSLQRIW+   A+RGT+APLCRSFS+DSLV++KPGEIGMVSGIP+EHLTRRVVIYSPA
Sbjct: 1   MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60

Query: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEK 120
           RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAK FA+K
Sbjct: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120

Query: 121 HGWEYVVKKRHTPLLKAKAYADNFKWKGHPEPKEA 155
           HGWEYVVKKRHTPLLK KAYADNFKWKGHPE KEA
Sbjct: 121 HGWEYVVKKRHTPLLKVKAYADNFKWKGHPEAKEA 155

[Close]

BLAST of Csor.00g111090 vs. ExPASy TrEMBL
Match: A0A6J1HE01 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111463327 PE=3 SV=1)

HSP 1 Score: 324 bits (831), Expect = 2.24e-112
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MANSLQRIWNRGCALRGTMAPLCRSFSADSLVEVKPGEIGMVSGIPEEHLTRRVVIYSPA 60
           MANSLQRIWNRGCALRGTMAPLCRSFSADSLVEVKPGEIGMVSGIPEEHLTRRVVIYSPA
Sbjct: 1   MANSLQRIWNRGCALRGTMAPLCRSFSADSLVEVKPGEIGMVSGIPEEHLTRRVVIYSPA 60

Query: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEK 120
           RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEK
Sbjct: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEK 120

Query: 121 HGWEYVVKKRHTPLLKAKAYADNFKWKGHPEPKEA 155
           HGWEYVVKKRHTPLLKAKAYADNFKWKGHPEPKEA
Sbjct: 121 HGWEYVVKKRHTPLLKAKAYADNFKWKGHPEPKEA 155

[Close]

BLAST of Csor.00g111090 vs. ExPASy TrEMBL
Match: A0A6J1KR46 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111496890 PE=3 SV=1)

HSP 1 Score: 324 bits (831), Expect = 2.24e-112
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MANSLQRIWNRGCALRGTMAPLCRSFSADSLVEVKPGEIGMVSGIPEEHLTRRVVIYSPA 60
           MANSLQRIWNRGCALRGTMAPLCRSFSADSLVEVKPGEIGMVSGIPEEHLTRRVVIYSPA
Sbjct: 1   MANSLQRIWNRGCALRGTMAPLCRSFSADSLVEVKPGEIGMVSGIPEEHLTRRVVIYSPA 60

Query: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEK 120
           RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEK
Sbjct: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEK 120

Query: 121 HGWEYVVKKRHTPLLKAKAYADNFKWKGHPEPKEA 155
           HGWEYVVKKRHTPLLKAKAYADNFKWKGHPEPKEA
Sbjct: 121 HGWEYVVKKRHTPLLKAKAYADNFKWKGHPEPKEA 155

[Close]

BLAST of Csor.00g111090 vs. ExPASy TrEMBL
Match: A0A6J1BSY3 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111005430 PE=3 SV=1)

HSP 1 Score: 306 bits (783), Expect = 4.70e-105
Identity = 146/155 (94.19%), Postives = 149/155 (96.13%), Query Frame = 0


Query: 1   MANSLQRIWNRGCALRGTMAPLCRSFSADSLVEVKPGEIGMVSGIPEEHLTRRVVIYSPA 60
           MANSLQRIWN  C LRGT+APLCRSFSADSLV+VKPGEIGMVSGIPEEHLTRRVVIYSPA
Sbjct: 1   MANSLQRIWNHRCGLRGTLAPLCRSFSADSLVQVKPGEIGMVSGIPEEHLTRRVVIYSPA 60

Query: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEK 120
           RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEK
Sbjct: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEK 120

Query: 121 HGWEYVVKKRHTPLLKAKAYADNFKWKGHPEPKEA 155
           HGW+YVVKKRHTPLLK KAYADNFKWKG PE KEA
Sbjct: 121 HGWDYVVKKRHTPLLKVKAYADNFKWKGPPEAKEA 155

[Close]

BLAST of Csor.00g111090 vs. ExPASy TrEMBL
Match: A0A6J1IIF4 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111477781 PE=3 SV=1)

HSP 1 Score: 300 bits (767), Expect = 1.29e-102
Identity = 142/155 (91.61%), Postives = 149/155 (96.13%), Query Frame = 0


Query: 1   MANSLQRIWNRGCALRGTMAPLCRSFSADSLVEVKPGEIGMVSGIPEEHLTRRVVIYSPA 60
           MANSLQRIW+   ALRGT+APLCRSFS+DSLV++KPGEIGMVSGIP+EHLTRRVVIYSPA
Sbjct: 1   MANSLQRIWSNSRALRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60

Query: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEK 120
           RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAK FA+K
Sbjct: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120

Query: 121 HGWEYVVKKRHTPLLKAKAYADNFKWKGHPEPKEA 155
           HGWEYVVKKRHTPLLK KAYADNFKWKGHPE KEA
Sbjct: 121 HGWEYVVKKRHTPLLKVKAYADNFKWKGHPEAKEA 155

[Close]

BLAST of Csor.00g111090 vs. ExPASy TrEMBL
Match: A0A6J1GDQ9 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111453236 PE=3 SV=1)

HSP 1 Score: 299 bits (765), Expect = 2.61e-102
Identity = 141/155 (90.97%), Postives = 149/155 (96.13%), Query Frame = 0


Query: 1   MANSLQRIWNRGCALRGTMAPLCRSFSADSLVEVKPGEIGMVSGIPEEHLTRRVVIYSPA 60
           MANSLQRIW+   A+RGT+APLCRSFS+DSLV++KPGEIGMVSGIP+EHLTRRVVIYSPA
Sbjct: 1   MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60

Query: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEK 120
           RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAK FA+K
Sbjct: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120

Query: 121 HGWEYVVKKRHTPLLKAKAYADNFKWKGHPEPKEA 155
           HGWEYVVKKRHTPLLK KAYADNFKWKGHPE KEA
Sbjct: 121 HGWEYVVKKRHTPLLKVKAYADNFKWKGHPEAKEA 155

[Close]

BLAST of Csor.00g111090 vs. TAIR 10
Match: AT5G67590.1 (NADH-ubiquinone oxidoreductase-related )

HSP 1 Score: 223.0 bits (567), Expect = 1.6e-58
Identity = 103/145 (71.03%), Postives = 125/145 (86.21%), Query Frame = 0


Query: 11  RGCALRGTMAPLCRSFSADSLVE--VKPGEIGMVSGIPEEHLTRRVVIYSPARTASQQGS 70
           R   +  T+  + R F+ D++VE   K GEIG VSGIPEEHL+R+V+IYSPARTA+Q GS
Sbjct: 9   RTIRIAATLRRVARPFATDAVVESDYKRGEIGKVSGIPEEHLSRKVIIYSPARTATQSGS 68

Query: 71  GKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEKHGWEYVVK 130
           GK+GKWKINF+ST KWENPLMGWTSTGDPYANVGDSAL+FDSEEAAK+FAE+HGW+Y VK
Sbjct: 69  GKLGKWKINFVSTLKWENPLMGWTSTGDPYANVGDSALAFDSEEAAKSFAERHGWDYKVK 128

Query: 131 KRHTPLLKAKAYADNFKWKGHPEPK 154
           K +TPLLK K+Y+DNFKWKG+P+P+
Sbjct: 129 KPNTPLLKVKSYSDNFKWKGNPQPE 153

The following BLAST results are available for this feature:

BLAST of Csor.00g111090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJW4	2.3e-57	71.03	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Arabidop...	[more]
Q5XIF3	8.9e-25	46.28	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Rattus n...	[more]
Q02375	4.4e-24	47.27	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Bos taur...	[more]
Q66XS7	5.8e-24	47.27	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Gekko ja...	[more]
Q0MQH0	7.5e-24	46.36	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Gorilla ...	[more]

BLAST of Csor.00g111090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022962977.1	4.63e-112	100.00	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucur...	[more]
XP_022132610.1	9.70e-105	94.19	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Momordica ...	[more]
XP_038881462.1	9.70e-105	93.55	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Benincasa ...	[more]
XP_022977437.1	2.67e-102	91.61	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucur...	[more]
XP_022950018.1	5.40e-102	90.97	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucur...	[more]

BLAST of Csor.00g111090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HE01	2.24e-112	100.00	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucurbit...	[more]
A0A6J1KR46	2.24e-112	100.00	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucurbit...	[more]
A0A6J1BSY3	4.70e-105	94.19	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Momordic...	[more]
A0A6J1IIF4	1.29e-102	91.61	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucurbit...	[more]
A0A6J1GDQ9	2.61e-102	90.97	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucurbit...	[more]

BLAST of Csor.00g111090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67590.1	1.6e-58	71.03	NADH-ubiquinone oxidoreductase-related	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038532	NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamily	GENE3D	3.30.160.190	atu1810 like domain	coord: 52..127 e-value: 1.6E-34 score: 119.7
IPR006885	NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial	PFAM	PF04800	ETC_C1_NDUFA4	coord: 53..148 e-value: 3.3E-33 score: 113.8
IPR006885	NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial	PANTHER	PTHR12219	NADH-UBIQUINONE OXIDOREDUCTASE	coord: 23..152
None	No IPR available	PANTHER	PTHR12219:SF23	NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 4, MITOCHONDRIAL-LIKE	coord: 23..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g111090.m01	Csor.00g111090.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0070469	respirasome
molecular_function	GO:0016651	oxidoreductase activity, acting on NAD(P)H