Csor.00g110440 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGGGATCTGCCGACCAACGTAAGCCGCCAATCGCTCGGCCTTTCCCACTCTACAAGCAGCTGTCATGGTCGCCTGACGCCGACCGTGAGGATGCCTGGCTCCGTCGCAAAGCCCAGAGCAAGATGCGGCGGAGCAAGAGCGTGACCGACGACGACCTCGAAGAACTCAAAGCCTGCGTGGAGTTGGGTTTCGGATTCAATTCGCCTGAGGTGGACCCTCGACTTTGTGAAACTTTGCCGGCGTTGAGCTTTTACCAGGCCGTCAATAAGCACTACAATCACTCTCTCTCCAATTCGTCGGCGTCTCTCTGTTCTTCCCCTGGGTCCGGCTCTGTTTCTCCATCCGCCCAGAGCAGCCCCGCCGCCATAATCAGCCACGGTATGTTACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTTTTTTTACAACCTCTAATGAAATTGAATGGAGAAAATTATATGAATCTTATTGTTTTGATTTTGGTTTTTCTTGTTCTGATTGGATGCTTGGAAATTTGGAACTGGGTTTTCAGGGGAGAATCCGCAGACGGTGAAAGCAAGGCTGAAACAATGGGCGCAGGTTGTTGCTTGTTCAGTACGGCAGTATTAA ATGTCGGGATCTGCCGACCAACGTAAGCCGCCAATCGCTCGGCCTTTCCCACTCTACAAGCAGCTGTCATGGTCGCCTGACGCCGACCGTGAGGATGCCTGGCTCCGTCGCAAAGCCCAGAGCAAGATGCGGCGGAGCAAGAGCGTGACCGACGACGACCTCGAAGAACTCAAAGCCTGCGTGGAGTTGGGTTTCGGATTCAATTCGCCTGAGGTGGACCCTCGACTTTGTGAAACTTTGCCGGCGTTGAGCTTTTACCAGGCCGTCAATAAGCACTACAATCACTCTCTCTCCAATTCGTCGGCGTCTCTCTGTTCTTCCCCTGGGTCCGGCTCTGTTTCTCCATCCGCCCAGAGCAGCCCCGCCGCCATAATCAGCCACGGGGAGAATCCGCAGACGGTGAAAGCAAGGCTGAAACAATGGGCGCAGGTTGTTGCTTGTTCAGTACGGCAGTATTAA ATGTCGGGATCTGCCGACCAACGTAAGCCGCCAATCGCTCGGCCTTTCCCACTCTACAAGCAGCTGTCATGGTCGCCTGACGCCGACCGTGAGGATGCCTGGCTCCGTCGCAAAGCCCAGAGCAAGATGCGGCGGAGCAAGAGCGTGACCGACGACGACCTCGAAGAACTCAAAGCCTGCGTGGAGTTGGGTTTCGGATTCAATTCGCCTGAGGTGGACCCTCGACTTTGTGAAACTTTGCCGGCGTTGAGCTTTTACCAGGCCGTCAATAAGCACTACAATCACTCTCTCTCCAATTCGTCGGCGTCTCTCTGTTCTTCCCCTGGGTCCGGCTCTGTTTCTCCATCCGCCCAGAGCAGCCCCGCCGCCATAATCAGCCACGGGGAGAATCCGCAGACGGTGAAAGCAAGGCTGAAACAATGGGCGCAGGTTGTTGCTTGTTCAGTACGGCAGTATTAA MSGSADQRKPPIARPFPLYKQLSWSPDADREDAWLRRKAQSKMRRSKSVTDDDLEELKACVELGFGFNSPEVDPRLCETLPALSFYQAVNKHYNHSLSNSSASLCSSPGSGSVSPSAQSSPAAIISHGENPQTVKARLKQWAQVVACSVRQY Homology
BLAST of Csor.00g110440 vs. NCBI nr
Match: XP_022962884.1 (uncharacterized protein LOC111463251 [Cucurbita moschata] >KAG6595037.1 hypothetical protein SDJN03_11590, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 301 bits (771), Expect = 5.23e-103 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of Csor.00g110440 vs. NCBI nr
Match: XP_023518715.1 (uncharacterized protein LOC111782145 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 300 bits (767), Expect = 2.13e-102 Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0
BLAST of Csor.00g110440 vs. NCBI nr
Match: XP_023003217.1 (uncharacterized protein LOC111496895 [Cucurbita maxima]) HSP 1 Score: 298 bits (764), Expect = 6.12e-102 Identity = 151/152 (99.34%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of Csor.00g110440 vs. NCBI nr
Match: KAG7027060.1 (hypothetical protein SDJN02_11069 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 291 bits (745), Expect = 4.67e-99 Identity = 150/152 (98.68%), Postives = 150/152 (98.68%), Query Frame = 0
BLAST of Csor.00g110440 vs. NCBI nr
Match: XP_038881139.1 (uncharacterized protein LOC120072737 [Benincasa hispida]) HSP 1 Score: 258 bits (659), Expect = 6.70e-86 Identity = 133/154 (86.36%), Postives = 139/154 (90.26%), Query Frame = 0
BLAST of Csor.00g110440 vs. ExPASy TrEMBL
Match: A0A6J1HIC1 (uncharacterized protein LOC111463251 OS=Cucurbita moschata OX=3662 GN=LOC111463251 PE=4 SV=1) HSP 1 Score: 301 bits (771), Expect = 2.53e-103 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of Csor.00g110440 vs. ExPASy TrEMBL
Match: A0A6J1KLU9 (uncharacterized protein LOC111496895 OS=Cucurbita maxima OX=3661 GN=LOC111496895 PE=4 SV=1) HSP 1 Score: 298 bits (764), Expect = 2.96e-102 Identity = 151/152 (99.34%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of Csor.00g110440 vs. ExPASy TrEMBL
Match: A0A0A0KIC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490880 PE=4 SV=1) HSP 1 Score: 255 bits (651), Expect = 5.38e-85 Identity = 132/154 (85.71%), Postives = 136/154 (88.31%), Query Frame = 0
BLAST of Csor.00g110440 vs. ExPASy TrEMBL
Match: A0A5D3CRC3 (Membrane insertase YidC OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004830 PE=4 SV=1) HSP 1 Score: 253 bits (647), Expect = 2.19e-84 Identity = 131/154 (85.06%), Postives = 135/154 (87.66%), Query Frame = 0
BLAST of Csor.00g110440 vs. ExPASy TrEMBL
Match: A0A6J1IVC7 (uncharacterized protein LOC111478729 OS=Cucurbita maxima OX=3661 GN=LOC111478729 PE=4 SV=1) HSP 1 Score: 251 bits (640), Expect = 2.55e-83 Identity = 130/154 (84.42%), Postives = 136/154 (88.31%), Query Frame = 0
BLAST of Csor.00g110440 vs. TAIR 10
Match: AT4G33985.1 (Protein of unknown function (DUF1685) ) HSP 1 Score: 154.1 bits (388), Expect = 9.2e-38 Identity = 86/145 (59.31%), Postives = 106/145 (73.10%), Query Frame = 0
BLAST of Csor.00g110440 vs. TAIR 10
Match: AT3G50350.2 (Protein of unknown function (DUF1685) ) HSP 1 Score: 127.1 bits (318), Expect = 1.2e-29 Identity = 73/140 (52.14%), Postives = 91/140 (65.00%), Query Frame = 0
BLAST of Csor.00g110440 vs. TAIR 10
Match: AT2G15590.2 (Protein of unknown function (DUF1685) ) HSP 1 Score: 119.8 bits (299), Expect = 1.9e-27 Identity = 68/141 (48.23%), Postives = 93/141 (65.96%), Query Frame = 0
BLAST of Csor.00g110440 vs. TAIR 10
Match: AT3G50350.1 (Protein of unknown function (DUF1685) ) HSP 1 Score: 103.2 bits (256), Expect = 1.9e-22 Identity = 61/110 (55.45%), Postives = 72/110 (65.45%), Query Frame = 0
BLAST of Csor.00g110440 vs. TAIR 10
Match: AT2G15590.1 (Protein of unknown function (DUF1685) ) HSP 1 Score: 102.8 bits (255), Expect = 2.4e-22 Identity = 52/93 (55.91%), Postives = 68/93 (73.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|