Csor.00g110090 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTATTTGCAGTTCATCGGAATCCACCGCCGTCGCCACCGCCAAACTAATCCTCAACGATGGAAGTCTGCAGGAATTTTCGTATCCTGTTAAGGTTTCCTACGTTCTTCAAAAGAATCCGTCGTGCTTTATTTGCAACTCCGACGAGATGGATTTCGACGACGCCTTGTCGGCTATTAATGACGAGGAGGAGCTTCAACTCGGACAGCTCTATTTTGCGCTGCCGTTGAGTAGGCTGAAGCAGCCGCTTCAGGCCGAGGAAATGGCCGCATTGGCCGTCAAGGCTAACTCTGCGCTCATGAAATGTGGCGCCGGTGATAAATGCAGCCACCGGCGGAGATCTGTGTCTCCATTAGTTTTCACAGTTGAGGAACTCAAGACTCGCAAGAGACTCTCCGCCGGCCGTAGTGGCGCCGGTGGAAGAAAAAAGTTCGCGGCGAATTTATCGGTGATACCCGAGTAG ATGGGTATTTGCAGTTCATCGGAATCCACCGCCGTCGCCACCGCCAAACTAATCCTCAACGATGGAAGTCTGCAGGAATTTTCGTATCCTGTTAAGGTTTCCTACGTTCTTCAAAAGAATCCGTCGTGCTTTATTTGCAACTCCGACGAGATGGATTTCGACGACGCCTTGTCGGCTATTAATGACGAGGAGGAGCTTCAACTCGGACAGCTCTATTTTGCGCTGCCGTTGAGTAGGCTGAAGCAGCCGCTTCAGGCCGAGGAAATGGCCGCATTGGCCGTCAAGGCTAACTCTGCGCTCATGAAATGTGGCGCCGGTGATAAATGCAGCCACCGGCGGAGATCTGTGTCTCCATTAGTTTTCACAGTTGAGGAACTCAAGACTCGCAAGAGACTCTCCGCCGGCCGTAGTGGCGCCGGTGGAAGAAAAAAGTTCGCGGCGAATTTATCGGTGATACCCGAGTAG ATGGGTATTTGCAGTTCATCGGAATCCACCGCCGTCGCCACCGCCAAACTAATCCTCAACGATGGAAGTCTGCAGGAATTTTCGTATCCTGTTAAGGTTTCCTACGTTCTTCAAAAGAATCCGTCGTGCTTTATTTGCAACTCCGACGAGATGGATTTCGACGACGCCTTGTCGGCTATTAATGACGAGGAGGAGCTTCAACTCGGACAGCTCTATTTTGCGCTGCCGTTGAGTAGGCTGAAGCAGCCGCTTCAGGCCGAGGAAATGGCCGCATTGGCCGTCAAGGCTAACTCTGCGCTCATGAAATGTGGCGCCGGTGATAAATGCAGCCACCGGCGGAGATCTGTGTCTCCATTAGTTTTCACAGTTGAGGAACTCAAGACTCGCAAGAGACTCTCCGCCGGCCGTAGTGGCGCCGGTGGAAGAAAAAAGTTCGCGGCGAATTTATCGGTGATACCCGAGTAG MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGAGDKCSHRRRSVSPLVFTVEELKTRKRLSAGRSGAGGRKKFAANLSVIPE Homology
BLAST of Csor.00g110090 vs. NCBI nr
Match: KAG6595072.1 (hypothetical protein SDJN03_11625, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 300 bits (767), Expect = 2.48e-102 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Csor.00g110090 vs. NCBI nr
Match: XP_022963140.1 (uncharacterized protein LOC111463438 [Cucurbita moschata]) HSP 1 Score: 298 bits (763), Expect = 1.01e-101 Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0
BLAST of Csor.00g110090 vs. NCBI nr
Match: KAG7027087.1 (hypothetical protein SDJN02_11097, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 296 bits (757), Expect = 8.31e-101 Identity = 152/154 (98.70%), Postives = 152/154 (98.70%), Query Frame = 0
BLAST of Csor.00g110090 vs. NCBI nr
Match: XP_023518464.1 (uncharacterized protein LOC111781952 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 291 bits (746), Expect = 3.95e-99 Identity = 149/154 (96.75%), Postives = 152/154 (98.70%), Query Frame = 0
BLAST of Csor.00g110090 vs. NCBI nr
Match: XP_023003596.1 (uncharacterized protein LOC111497150 [Cucurbita maxima]) HSP 1 Score: 288 bits (737), Expect = 9.32e-98 Identity = 145/154 (94.16%), Postives = 151/154 (98.05%), Query Frame = 0
BLAST of Csor.00g110090 vs. ExPASy TrEMBL
Match: A0A6J1HH54 (uncharacterized protein LOC111463438 OS=Cucurbita moschata OX=3662 GN=LOC111463438 PE=4 SV=1) HSP 1 Score: 298 bits (763), Expect = 4.89e-102 Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0
BLAST of Csor.00g110090 vs. ExPASy TrEMBL
Match: A0A6J1KPP1 (uncharacterized protein LOC111497150 OS=Cucurbita maxima OX=3661 GN=LOC111497150 PE=4 SV=1) HSP 1 Score: 288 bits (737), Expect = 4.51e-98 Identity = 145/154 (94.16%), Postives = 151/154 (98.05%), Query Frame = 0
BLAST of Csor.00g110090 vs. ExPASy TrEMBL
Match: A0A0A0KJB4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G488320 PE=4 SV=1) HSP 1 Score: 281 bits (720), Expect = 1.76e-95 Identity = 142/154 (92.21%), Postives = 148/154 (96.10%), Query Frame = 0
BLAST of Csor.00g110090 vs. ExPASy TrEMBL
Match: A0A5D3CRH4 (HTH-type transcriptional regulator protein ptxE OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005340 PE=4 SV=1) HSP 1 Score: 278 bits (710), Expect = 5.91e-94 Identity = 139/154 (90.26%), Postives = 147/154 (95.45%), Query Frame = 0
BLAST of Csor.00g110090 vs. ExPASy TrEMBL
Match: A0A1S3B0H3 (uncharacterized protein LOC103484721 OS=Cucumis melo OX=3656 GN=LOC103484721 PE=4 SV=1) HSP 1 Score: 278 bits (710), Expect = 5.91e-94 Identity = 139/154 (90.26%), Postives = 147/154 (95.45%), Query Frame = 0
BLAST of Csor.00g110090 vs. TAIR 10
Match: AT2G23690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37240.1); Has 243 Blast hits to 243 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 177.2 bits (448), Expect = 1.0e-44 Identity = 100/164 (60.98%), Postives = 119/164 (72.56%), Query Frame = 0
BLAST of Csor.00g110090 vs. TAIR 10
Match: AT4G37240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 164.9 bits (416), Expect = 5.3e-41 Identity = 102/175 (58.29%), Postives = 120/175 (68.57%), Query Frame = 0
BLAST of Csor.00g110090 vs. TAIR 10
Match: AT5G66580.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 143.3 bits (360), Expect = 1.6e-34 Identity = 85/156 (54.49%), Postives = 104/156 (66.67%), Query Frame = 0
BLAST of Csor.00g110090 vs. TAIR 10
Match: AT3G50800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66580.1); Has 249 Blast hits to 249 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 249; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 139.8 bits (351), Expect = 1.8e-33 Identity = 84/158 (53.16%), Postives = 103/158 (65.19%), Query Frame = 0
BLAST of Csor.00g110090 vs. TAIR 10
Match: AT1G76600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21010.1); Has 220 Blast hits to 220 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 82.4 bits (202), Expect = 3.5e-16 Identity = 60/157 (38.22%), Postives = 90/157 (57.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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