Csor.00g109830 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g109830
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Protein kinase domain-containing protein
Location	Csor_Chr20: 651040 .. 652025 (+)
RNA-Seq Expression	Csor.00g109830
Synteny	Csor.00g109830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATAAGCAGCCGAAAGTCGCTCGAAAGAACCTCAAAGCTATTCCCTGCACCAGATGCGTATCAAATGCTGGAATTGCAGGAATCCTAATACAGGTACCCATTAGAGGTTCCCGATGCATTTAAAGTGTTTTGGGGAAGAATCAGAAACTCTAAGTTGAGGACTTATGAATTAGTTCATGTGAAATTCAGAAGAAAATAAGGCAGCAAGAATCCTTCAAGGGTCATGAAAAGTATTAATCCTGAGAGGACGGAGGTTCGGTTTTGCATTGATCCCCTAACGAATCAACACCAAACTCAACCTAAATGCTTCGAGTTCTTCACGAACATGAACAGGAGTAGCGGTCGATACTCCAGGAGGGTTTTCAGTTGGGGGGAAAAGGGACGCAGAGAACTTAGGAAAAACAAAGAATCTTATATTGCACCATGGTTTGGACAGGTATCCCGGTATTCCAATCCGTTGAGGTCAAGGGCAGTTTGCAATTCAGGCTGTGGTGGAGAAAGTAGTAGTAATTCACGTGGCCAGAAGAGGGTTTATGTGTCATATAACCATATCAATGGTGGCGAATCTTAAGACAAAGCAGGAATGGGCCACCATTACTAGAAAGTCCGAAGTCTTCTTATAAGATAGATGATCAGTCATATGGAAAAGATCTGCTATGGTTAAAGTATCCCAGTGATATTAATATCATTCTTTGCTTAAGCTGTATGATCCATTTTTGATAAAGCATTCTATGATCTTCTAAAGTTTTTATCGCTAACAATTTTCTGTCTTTCATCAGAATTACGCCCCGAAAAAGAGAATTCATTATTCAGGACCCTTGATGCCTCCTGGTGGAAACCTTGAGGAAATGTTAAAAGAGCACGAGAAACAAATCCAGCATGCAGTACGTAAGGCTCGTATAGACAAAGCGAAGACAAGAAAGACATACGATGACAAAAGTCTATCGGAGTCGTTGCTTCACCATGTGAGAAACGGCAATTGA

mRNA sequence

ATGAATAAGCAGCCGAAAGTCGCTCGAAAGAACCTCAAAGCTATTCCCTGCACCAGATGCGTATCAAATGCTGGAATTGCAGGAATCCTAATACAGAATTACGCCCCGAAAAAGAGAATTCATTATTCAGGACCCTTGATGCCTCCTGGTGGAAACCTTGAGGAAATGTTAAAAGAGCACGAGAAACAAATCCAGCATGCAGTACGTAAGGCTCGTATAGACAAAGCGAAGACAAGAAAGACATACGATGACAAAAGTCTATCGGAGTCGTTGCTTCACCATGTGAGAAACGGCAATTGA

Coding sequence (CDS)

ATGAATAAGCAGCCGAAAGTCGCTCGAAAGAACCTCAAAGCTATTCCCTGCACCAGATGCGTATCAAATGCTGGAATTGCAGGAATCCTAATACAGAATTACGCCCCGAAAAAGAGAATTCATTATTCAGGACCCTTGATGCCTCCTGGTGGAAACCTTGAGGAAATGTTAAAAGAGCACGAGAAACAAATCCAGCATGCAGTACGTAAGGCTCGTATAGACAAAGCGAAGACAAGAAAGACATACGATGACAAAAGTCTATCGGAGTCGTTGCTTCACCATGTGAGAAACGGCAATTGA

Protein sequence

MNKQPKVARKNLKAIPCTRCVSNAGIAGILIQNYAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTRKTYDDKSLSESLLHHVRNGN

Homology

[Close]

BLAST of Csor.00g109830 vs. ExPASy Swiss-Prot
Match: F4I114 (Probable serine/threonine-protein kinase At1g09600 OS=Arabidopsis thaliana OX=3702 GN=At1g09600 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.1e-09
Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 0


Query: 33  NYAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTR 80
           N   K+R+H SGPL+  GGNL+EMLKEHE+QIQ AVRKAR+DK   R
Sbjct: 653 NGEKKERMHCSGPLVSAGGNLDEMLKEHERQIQLAVRKARVDKKTNR 699

[Close]

BLAST of Csor.00g109830 vs. NCBI nr
Match: KAG6570439.1 (putative serine/threonine-protein kinase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 202 bits (513), Expect = 2.31e-65
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1  MNKQPKVARKNLKAIPCTRCVSNAGIAGILIQNYAPKKRIHYSGPLMPPGGNLEEMLKEH 60
          MNKQPKVARKNLKAIPCTRCVSNAGIAGILIQNYAPKKRIHYSGPLMPPGGNLEEMLKEH
Sbjct: 1  MNKQPKVARKNLKAIPCTRCVSNAGIAGILIQNYAPKKRIHYSGPLMPPGGNLEEMLKEH 60

Query: 61 EKQIQHAVRKARIDKAKTRKTYDDKSLSESLLHHVRNGN 99
          EKQIQHAVRKARIDKAKTRKTYDDKSLSESLLHHVRNGN
Sbjct: 61 EKQIQHAVRKARIDKAKTRKTYDDKSLSESLLHHVRNGN 99

[Close]

BLAST of Csor.00g109830 vs. NCBI nr
Match: XP_022973346.1 (probable serine/threonine-protein kinase At1g09600 [Cucurbita maxima])

HSP 1 Score: 135 bits (339), Expect = 3.14e-37
Identity = 65/68 (95.59%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 32  QNYAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTRKTYDDKSLSESL 91
            NYA KKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTRKTYDDKSLSESL
Sbjct: 158 MNYASKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTRKTYDDKSLSESL 217

Query: 92  LHHVRNGN 99
           LHH+RNGN
Sbjct: 218 LHHMRNGN 225

[Close]

BLAST of Csor.00g109830 vs. NCBI nr
Match: XP_023521030.1 (probable serine/threonine-protein kinase At1g09600 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 139 bits (350), Expect = 8.14e-36
Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 0


Query: 32  QNYAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTRKTYDDKSLSESL 91
            NYAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTRKTYDDKSLSESL
Sbjct: 666 MNYAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTRKTYDDKSLSESL 725

Query: 92  LHHVRNGN 99
           LHHVRNGN
Sbjct: 726 LHHVRNGN 733

[Close]

BLAST of Csor.00g109830 vs. NCBI nr
Match: XP_022945343.1 (probable serine/threonine-protein kinase At1g09600 [Cucurbita moschata])

HSP 1 Score: 139 bits (350), Expect = 8.14e-36
Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 0


Query: 32  QNYAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTRKTYDDKSLSESL 91
            NYAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTRKTYDDKSLSESL
Sbjct: 666 MNYAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTRKTYDDKSLSESL 725

Query: 92  LHHVRNGN 99
           LHHVRNGN
Sbjct: 726 LHHVRNGN 733

[Close]

BLAST of Csor.00g109830 vs. NCBI nr
Match: KAG6596961.1 (putative serine/threonine-protein kinase, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028434.1 putative serine/threonine-protein kinase, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 139 bits (350), Expect = 8.14e-36
Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 0


Query: 32  QNYAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTRKTYDDKSLSESL 91
            NYAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTRKTYDDKSLSESL
Sbjct: 666 MNYAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTRKTYDDKSLSESL 725

Query: 92  LHHVRNGN 99
           LHHVRNGN
Sbjct: 726 LHHVRNGN 733

[Close]

BLAST of Csor.00g109830 vs. ExPASy TrEMBL
Match: A0A6J1I8E4 (probable serine/threonine-protein kinase At1g09600 OS=Cucurbita maxima OX=3661 GN=LOC111471902 PE=4 SV=1)

HSP 1 Score: 135 bits (339), Expect = 1.52e-37
Identity = 65/68 (95.59%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 32  QNYAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTRKTYDDKSLSESL 91
            NYA KKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTRKTYDDKSLSESL
Sbjct: 158 MNYASKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTRKTYDDKSLSESL 217

Query: 92  LHHVRNGN 99
           LHH+RNGN
Sbjct: 218 LHHMRNGN 225

[Close]

BLAST of Csor.00g109830 vs. ExPASy TrEMBL
Match: A0A6J1G0J4 (probable serine/threonine-protein kinase At1g09600 OS=Cucurbita moschata OX=3662 GN=LOC111449604 PE=4 SV=1)

HSP 1 Score: 139 bits (350), Expect = 3.94e-36
Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 0


Query: 32  QNYAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTRKTYDDKSLSESL 91
            NYAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTRKTYDDKSLSESL
Sbjct: 666 MNYAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTRKTYDDKSLSESL 725

Query: 92  LHHVRNGN 99
           LHHVRNGN
Sbjct: 726 LHHVRNGN 733

[Close]

BLAST of Csor.00g109830 vs. ExPASy TrEMBL
Match: A0A6J1I8B9 (probable serine/threonine-protein kinase At1g09600 OS=Cucurbita maxima OX=3661 GN=LOC111471886 PE=4 SV=1)

HSP 1 Score: 135 bits (339), Expect = 1.26e-34
Identity = 65/68 (95.59%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 32  QNYAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTRKTYDDKSLSESL 91
            NYA KKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTRKTYDDKSLSESL
Sbjct: 666 MNYASKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTRKTYDDKSLSESL 725

Query: 92  LHHVRNGN 99
           LHH+RNGN
Sbjct: 726 LHHMRNGN 733

[Close]

BLAST of Csor.00g109830 vs. ExPASy TrEMBL
Match: A0A0A0KM83 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G247650 PE=4 SV=1)

HSP 1 Score: 127 bits (319), Expect = 1.15e-33
Identity = 60/66 (90.91%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 34  YAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTRKTYDDKSLSESLLH 93
           YAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKT+KTYDDK   E+LLH
Sbjct: 244 YAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTKKTYDDKGQMEALLH 303

Query: 94  HVRNGN 99
           HV+NGN
Sbjct: 304 HVKNGN 309

[Close]

BLAST of Csor.00g109830 vs. ExPASy TrEMBL
Match: A0A6J1E1J4 (probable serine/threonine-protein kinase At1g09600 OS=Momordica charantia OX=3673 GN=LOC111025103 PE=4 SV=1)

HSP 1 Score: 125 bits (314), Expect = 3.21e-31
Identity = 58/68 (85.29%), Postives = 63/68 (92.65%), Query Frame = 0


Query: 32  QNYAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTRKTYDDKSLSESL 91
            ++APKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKAR+DKAKT+K YDDK  +ESL
Sbjct: 666 MSFAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARLDKAKTKKAYDDKGQTESL 725

Query: 92  LHHVRNGN 99
           LHH RNGN
Sbjct: 726 LHHARNGN 733

[Close]

BLAST of Csor.00g109830 vs. TAIR 10
Match: AT1G71530.1 (Protein kinase superfamily protein )

HSP 1 Score: 75.5 bits (184), Expect = 2.7e-14
Identity = 35/48 (72.92%), Postives = 42/48 (87.50%), Query Frame = 0


Query: 33  NYAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTRK 81
           N   K RI+YSGPLMPPGGNLE++LKEHEKQIQ AVRKAR++K+ +RK
Sbjct: 589 NAPRKNRINYSGPLMPPGGNLEDLLKEHEKQIQQAVRKARVEKSASRK 636

[Close]

BLAST of Csor.00g109830 vs. TAIR 10
Match: AT1G33770.1 (Protein kinase superfamily protein )

HSP 1 Score: 73.9 bits (180), Expect = 7.9e-14
Identity = 31/47 (65.96%), Postives = 42/47 (89.36%), Query Frame = 0


Query: 37  KKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTRKTYD 84
           K R+HYSGPLMPPGGN+E+M+KEHE++IQ AVRK+R++K+ T+K  D
Sbjct: 561 KNRMHYSGPLMPPGGNIEDMMKEHERRIQEAVRKSRLEKSATKKNKD 607

[Close]

BLAST of Csor.00g109830 vs. TAIR 10
Match: AT4G10010.1 (Protein kinase superfamily protein )

HSP 1 Score: 69.3 bits (168), Expect = 1.9e-12
Identity = 30/44 (68.18%), Postives = 40/44 (90.91%), Query Frame = 0


Query: 37  KKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTRK 81
           K R+H SGPLMPPGGN+E++LK+HE+QIQ AVRK+R++K+ TRK
Sbjct: 419 KNRMHCSGPLMPPGGNIEDILKDHERQIQEAVRKSRLEKSATRK 462

[Close]

BLAST of Csor.00g109830 vs. TAIR 10
Match: AT1G53050.1 (Protein kinase superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 6.3e-11
Identity = 27/53 (50.94%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 39  RIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTRKTYDDKSLSESL 92
           +IHYSGPL+ P GN++++LK+H++ IQ AVR+ARIDKA+ +K   D++ S+ +
Sbjct: 631 KIHYSGPLVVPSGNMDQVLKDHDRHIQEAVRRARIDKARVKKLQADEASSQQV 683

[Close]

BLAST of Csor.00g109830 vs. TAIR 10
Match: AT1G09600.1 (Protein kinase superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 8.2e-11
Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 0


Query: 33  NYAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTR 80
           N   K+R+H SGPL+  GGNL+EMLKEHE+QIQ AVRKAR+DK   R
Sbjct: 653 NGEKKERMHCSGPLVSAGGNLDEMLKEHERQIQLAVRKARVDKKTNR 699

The following BLAST results are available for this feature:

BLAST of Csor.00g109830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4I114	1.1e-09	65.96	Probable serine/threonine-protein kinase At1g09600 OS=Arabidopsis thaliana OX=37...	[more]

BLAST of Csor.00g109830 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6570439.1	2.31e-65	100.00	putative serine/threonine-protein kinase, partial [Cucurbita argyrosperma subsp....	[more]
XP_022973346.1	3.14e-37	95.59	probable serine/threonine-protein kinase At1g09600 [Cucurbita maxima]	[more]
XP_023521030.1	8.14e-36	98.53	probable serine/threonine-protein kinase At1g09600 [Cucurbita pepo subsp. pepo]	[more]
XP_022945343.1	8.14e-36	98.53	probable serine/threonine-protein kinase At1g09600 [Cucurbita moschata]	[more]
KAG6596961.1	8.14e-36	98.53	putative serine/threonine-protein kinase, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of Csor.00g109830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I8E4	1.52e-37	95.59	probable serine/threonine-protein kinase At1g09600 OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1G0J4	3.94e-36	98.53	probable serine/threonine-protein kinase At1g09600 OS=Cucurbita moschata OX=3662...	[more]
A0A6J1I8B9	1.26e-34	95.59	probable serine/threonine-protein kinase At1g09600 OS=Cucurbita maxima OX=3661 G...	[more]
A0A0A0KM83	1.15e-33	90.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G247650 PE=4 SV=1	[more]
A0A6J1E1J4	3.21e-31	85.29	probable serine/threonine-protein kinase At1g09600 OS=Momordica charantia OX=367...	[more]

BLAST of Csor.00g109830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71530.1	2.7e-14	72.92	Protein kinase superfamily protein	[more]
AT1G33770.1	7.9e-14	65.96	Protein kinase superfamily protein	[more]
AT4G10010.1	1.9e-12	68.18	Protein kinase superfamily protein	[more]
AT1G53050.1	6.3e-11	50.94	Protein kinase superfamily protein	[more]
AT1G09600.1	8.2e-11	65.96	Protein kinase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 50..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g109830.m01	Csor.00g109830.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004672	protein kinase activity