Csor.00g109400 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g109400
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUbiquitin-conjugating enzyme E2, putative
LocationCsor_Chr20: 141727 .. 144492 (+)
RNA-Seq ExpressionCsor.00g109400
SyntenyCsor.00g109400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGGAAATCGCGACCACCGCCCGCAACAGCCTCTGTTTGGTGGGGGGAGATCGTCTTCGTCGACGTCCTTAGCGCCTCCAACTTCATGGGCGTCCACAACCTCCGTTTCTGCTTCAGGGAAGAGAATTCAAAGAGAAATGACTGAGTTTAACTTGGACCCACCTTCCGATTGCTCCGCCGGGCCAAAGGGCGACAATCTTTACCACTGGTTCGCTACCATATTTGGCCCTCCTGGTAGGTACCCTTTAGGGATTCGTACTTCTTTGTTTCAATTCCTGAACAGATGCTCACTAAAACCCTGATGGGGTTTCATTTCCTGACTGCTAAGGAAGTTTTATTTACAATTCTAAAGGAAGTGATTAGGGAAGAAGATGCCCACTGTTTAGCTTGAAGAACTTTTACCAAAAACTAAATTTATTTGTTTTGGATCATATGAAGGCTGTGTATGAACACTATCTCCAATAAATCAGGACAAATTTCTGGTAATCTTGACTTGTGTCTGTGTTGTTTATAGGAACACCATATGAAGGTGGCATATTTTTCCTGGACATAATTTTTCCAAGTGATTATCCATTCAATCCTCCAAAGGTACTCTTCTCCCCCACATCCTTCAATTTGATGCTCATTCTTGATCGATGCTACACTGTTTCAAGTTGTTTATTTATTAAGAAGGATCAGGTGTGCAGGTTGTATTTAAAACCCGAATCTACCACTGCAATGTCGATTCCTCCGGTAACGTAAGTTTGGACATTTTGAAGGATAGCTGGAGTCCTGCGTTAACAATTGCAAAGGTGTTAATTGCAGTGAAATCAATTTTTACAAACCCCAACCCTTGTGAGTTCCCTCACTTTCTGGACTCATTGTTTATGTCACTTTATGCTTCTTCTCGTTTACTTCATATGCCTTTCTATTTCAACTGCTTTTCTTTCATTTGGAATGCATTGTCCTTTGTGTCTCTAAGAACCGGGAGTGTAATCGAAGGGATAGACCAGATATATGTTCGGTTAGGTTCAGTTTTCACAGAGAGGGACTCTGTGATTGTTGAAAGGAATTTACTGGGAATGGGAGCTATTCTCCATGAATGTATGCAGACTATGGAGGGAGATGGTTTGTTTATATCAGTATAAAAGTTTCTAGTTACGATGATTGCCGGTGAGATGAATATTGTGAGGTCTCACATCGGTTGGAGGGGGGAACGAAGAACGAAGTACTTCTTTATAAGAGTGTGAAAAACTCTCGTTAGTAGATGCGTTTTAAAAACCTTGAGGAGAAGTCAAAAGAGGACAATATGTACTATGTTACAAATATGTTGGGGTAAAAGTATATAGAGAGGTTCGATGATCACAGAAATGGTTGGTCTGTTTTCGATTTAAATAAAATGATAAGGAAGAGACACGTGTGAAAAACTCTCGTTAGTAGATGCGTTTTAAAAACTTTGAGGAGAAGTCAAAAGAGGACAATATGTACTATGTTACAAATATGTTGGGGTAAAAGTATATAGAGAGGTTCGATGATCACAGAAATGGTTGGTCTGTTTTCGATTTAAATAAAATGATAAGGAAGAGACGCGTGTGAAAAACTCTCGTTAGTAGATGCGTTTTAAAAACTTTGAGGAGAAGTCAAAAGAGGACAATATGTACTATGTTACAAATATGTTGGGGTAAAAGTATATAGAGAGGTTCGATGATCACAGAAATGGTTGGTCTGTTTTCGATTTAAATAAAATGATAAGGAAGAGACGCGTGTGAAAAACTCTCGTTAGTAGATGCGTTTTAAAAACCTTGAGGAGAAGTCAAAAGAGGACAATATGTACTATGTTACAAATATGTTGGGGTAAAAGTATATAGAGAGTAAAAGTATATAGAGAGGTTCGATGATCACAGAAATGGTTGGTCTGTTTTCGATTTAAATAAAATGATAAGGAAGAGAAGATTGAGGAAGCAATGGCAGTGTGCTAACTGTTGTTCTATTCAACTAAATTGATGGCAAGTTCAAAGTCCCGGTTCATTTTGGATTCTACTAATGTTGCAGACGATCCAAATGCACCTGGTGTTGCTCACTTGTACTTGGCCGACAGAGCTAAACACGACGAGATAGCTGCTGAGTGGACGCTACGTTTTGCAAAGTGAATGGAACCTCAAAGAACCAACGGTGATGGATATGATTTTGGCATGGAGTTATGAAGAACAGTGGAAAGCAAATGTAGAGACGAGGACATGGAATGGAATACTACAAGTGTGGATATTATGAACGATTTGTAGTAGCCCCTTTGGAATTTAGGTGTCTGTCATATGCGTATGTAATATAGTGTTCTCTTGTGATGATCCGGAAGGATTCTATAGCTATCAAGTTTGGTGGTCACCCAACTGTTGTATTTATGACCAAGTTGAGATTTGAATACAAAAAAAACTGATATCTTCATTGGTCAGCTCCTCTCTTCTCAGTTTGATATCATAAATTCTTAAGAAGCCTGGCTGATCAAAAGCCACTCCTTGAAAACTACTGCAAATGAACATGGATGGTTCAGAGTGTGAAGATGGAGTGTGAAGAGTGTAAATAAACGTAGATGAAGCTGTGAAATTGAACATGGCCCAAACATCAGACCCTGCAGAGGGGTTTGGCGTGAGCTCATGGCGGCTGGAACAGCGTTGAAACCGACACAGTATGCTATCTTAATTGCAGCAGCTGAGGATAGAGTGAATTGGATAGAGTTGGGAAGTCCGGGTGGAAATGGAGCGCATCATATGCGACCATGTGGATGA

mRNA sequence

ATGGTGGGAAATCGCGACCACCGCCCGCAACAGCCTCTGTTTGGTGGGGGGAGATCGTCTTCGTCGACGTCCTTAGCGCCTCCAACTTCATGGGCGTCCACAACCTCCGTTTCTGCTTCAGGGAAGAGAATTCAAAGAGAAATGACTGAGTTTAACTTGGACCCACCTTCCGATTGCTCCGCCGGGCCAAAGGGCGACAATCTTTACCACTGGTTCGCTACCATATTTGGCCCTCCTGGAACACCATATGAAGGTGGCATATTTTTCCTGGACATAATTTTTCCAAGTGATTATCCATTCAATCCTCCAAAGGTTGTATTTAAAACCCGAATCTACCACTGCAATGTCGATTCCTCCGGTAACGTAAGTTTGGACATTTTGAAGGATAGCTGGAGTCCTGCGTTAACAATTGCAAAGGTGTTAATTGCAGTGAAATCAATTTTTACAAACCCCAACCCTTACGATCCAAATGCACCTGGTGTTGCTCACTTGTACTTGGCCGACAGAGCTAAACACGACGAGATAGCTGCTGAGTGGACGCTACGTTTTGCAAAACCCTGCAGAGGGGTTTGGCGTGAGCTCATGGCGGCTGGAACAGCGTTGAAACCGACACAGTATGCTATCTTAATTGCAGCAGCTGAGGATAGAGTGAATTGGATAGAGTTGGGAAGTCCGGGTGGAAATGGAGCGCATCATATGCGACCATGTGGATGA

Coding sequence (CDS)

ATGGTGGGAAATCGCGACCACCGCCCGCAACAGCCTCTGTTTGGTGGGGGGAGATCGTCTTCGTCGACGTCCTTAGCGCCTCCAACTTCATGGGCGTCCACAACCTCCGTTTCTGCTTCAGGGAAGAGAATTCAAAGAGAAATGACTGAGTTTAACTTGGACCCACCTTCCGATTGCTCCGCCGGGCCAAAGGGCGACAATCTTTACCACTGGTTCGCTACCATATTTGGCCCTCCTGGAACACCATATGAAGGTGGCATATTTTTCCTGGACATAATTTTTCCAAGTGATTATCCATTCAATCCTCCAAAGGTTGTATTTAAAACCCGAATCTACCACTGCAATGTCGATTCCTCCGGTAACGTAAGTTTGGACATTTTGAAGGATAGCTGGAGTCCTGCGTTAACAATTGCAAAGGTGTTAATTGCAGTGAAATCAATTTTTACAAACCCCAACCCTTACGATCCAAATGCACCTGGTGTTGCTCACTTGTACTTGGCCGACAGAGCTAAACACGACGAGATAGCTGCTGAGTGGACGCTACGTTTTGCAAAACCCTGCAGAGGGGTTTGGCGTGAGCTCATGGCGGCTGGAACAGCGTTGAAACCGACACAGTATGCTATCTTAATTGCAGCAGCTGAGGATAGAGTGAATTGGATAGAGTTGGGAAGTCCGGGTGGAAATGGAGCGCATCATATGCGACCATGTGGATGA

Protein sequence

MVGNRDHRPQQPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSGNVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWTLRFAKPCRGVWRELMAAGTALKPTQYAILIAAAEDRVNWIELGSPGGNGAHHMRPCG
Homology
[Close]
BLAST of Csor.00g109400 vs. ExPASy Swiss-Prot
Match: Q9LJD7 (Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana OX=3702 GN=COP10 PE=1 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 4.8e-70
Identity = 120/157 (76.43%), Postives = 135/157 (85.99%), Query Frame = 0 

Query: 29  TSWASTTSVSASGKRIQREMTEFNLDPPSDCSAGPKGDNLYHWFATIFGPPGTPYEGGIF 88
           +SW + TSVSASGKRIQREM E N+DPP DCSAGPKGDNLYHW ATI GP GTPYEGGIF
Sbjct: 26  SSWVAKTSVSASGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIF 85

Query: 89  FLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSGNVSLDILKDSWSPALTIAKVLIAVKSIF 148
           FLDIIFPSDYPF PPK+VFKTRIYHCNVD++G++S++IL+DSWSPALTI KVL A++SIF
Sbjct: 86  FLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIF 145

Query: 149 TNPNPYDPNAPGVAHLYLADRAKHDEIAAEWTLRFAK 186
             P PY P  P +A LYL DR KHDE+A EWTLRFAK
Sbjct: 146 LKPEPYSPALPVIARLYLTDREKHDEVAKEWTLRFAK 182

[Close]
BLAST of Csor.00g109400 vs. ExPASy Swiss-Prot
Match: Q2T9X7 (Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus OX=9913 GN=UBE2E3 PE=2 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 6.3e-54
Identity = 102/182 (56.04%), Postives = 129/182 (70.88%), Query Frame = 0 

Query: 5   RDHRPQQPLFGGGRSSSSTSLAPPTSWAS--TTSVSASGKRIQREMTEFNLDPPSDCSAG 64
           RD    +P     R  S+T     T  +S  T  +S S KRIQ+E+ E  LDPP +CSAG
Sbjct: 25  RDPAAPEPEEQEERKPSATQQKKNTKLSSKTTAKLSTSAKRIQKELAEITLDPPPNCSAG 84

Query: 65  PKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSGNV 124
           PKGDN+Y W +TI GPPG+ YEGG+FFLDI F SDYPF PPKV F+TRIYHCN++S G +
Sbjct: 85  PKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVI 144

Query: 125 SLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWTLR 184
            LDILKD+WSPALTI+KVL+++ S+ T+ NP DP    +A  YL +RA+HD IA +WT R
Sbjct: 145 CLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKR 204

[Close]
BLAST of Csor.00g109400 vs. ExPASy Swiss-Prot
Match: Q969T4 (Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens OX=9606 GN=UBE2E3 PE=1 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 6.3e-54
Identity = 102/182 (56.04%), Postives = 129/182 (70.88%), Query Frame = 0 

Query: 5   RDHRPQQPLFGGGRSSSSTSLAPPTSWAS--TTSVSASGKRIQREMTEFNLDPPSDCSAG 64
           RD    +P     R  S+T     T  +S  T  +S S KRIQ+E+ E  LDPP +CSAG
Sbjct: 25  RDPAAPEPEEQEERKPSATQQKKNTKLSSKTTAKLSTSAKRIQKELAEITLDPPPNCSAG 84

Query: 65  PKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSGNV 124
           PKGDN+Y W +TI GPPG+ YEGG+FFLDI F SDYPF PPKV F+TRIYHCN++S G +
Sbjct: 85  PKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVI 144

Query: 125 SLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWTLR 184
            LDILKD+WSPALTI+KVL+++ S+ T+ NP DP    +A  YL +RA+HD IA +WT R
Sbjct: 145 CLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKR 204

[Close]
BLAST of Csor.00g109400 vs. ExPASy Swiss-Prot
Match: P52483 (Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus OX=10090 GN=Ube2e3 PE=1 SV=2)

HSP 1 Score: 212.2 bits (539), Expect = 6.3e-54
Identity = 102/182 (56.04%), Postives = 129/182 (70.88%), Query Frame = 0 

Query: 5   RDHRPQQPLFGGGRSSSSTSLAPPTSWAS--TTSVSASGKRIQREMTEFNLDPPSDCSAG 64
           RD    +P     R  S+T     T  +S  T  +S S KRIQ+E+ E  LDPP +CSAG
Sbjct: 25  RDPAAPEPEEQEERKPSATQQKKNTKLSSKTTAKLSTSAKRIQKELAEITLDPPPNCSAG 84

Query: 65  PKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSGNV 124
           PKGDN+Y W +TI GPPG+ YEGG+FFLDI F SDYPF PPKV F+TRIYHCN++S G +
Sbjct: 85  PKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVI 144

Query: 125 SLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWTLR 184
            LDILKD+WSPALTI+KVL+++ S+ T+ NP DP    +A  YL +RA+HD IA +WT R
Sbjct: 145 CLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKR 204

[Close]
BLAST of Csor.00g109400 vs. ExPASy Swiss-Prot
Match: Q91W82 (Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus OX=10090 GN=Ube2e2 PE=2 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.5e-52
Identity = 97/179 (54.19%), Postives = 125/179 (69.83%), Query Frame = 0 

Query: 6   DHRPQQPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCSAGPKG 65
           D    QP    G+ SS T+            +S S KRIQ+E+ E  LDPP +CSAGPKG
Sbjct: 32  DREQVQPKKKEGKISSKTA----------AKLSTSAKRIQKELAEITLDPPPNCSAGPKG 91

Query: 66  DNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSGNVSLD 125
           DN+Y W +TI GPPG+ YEGG+FFLDI F  DYPF PPKV F+TRIYHCN++S G + LD
Sbjct: 92  DNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLD 151

Query: 126 ILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWTLRFA 185
           ILKD+WSPALTI+KVL+++ S+ T+ NP DP    +A  Y+ +RA+HD +A +WT R+A
Sbjct: 152 ILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 200

[Close]
BLAST of Csor.00g109400 vs. NCBI nr
Match: KAG6570333.1 (Constitutive photomorphogenesis protein 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 497 bits (1280), Expect = 8.34e-178
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0 

Query: 1   MVGNRDHRPQQPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60
           MVGNRDHRPQQPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS
Sbjct: 1   MVGNRDHRPQQPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60

Query: 61  AGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSG 120
           AGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSG
Sbjct: 61  AGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSG 120

Query: 121 NVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180
           NVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT
Sbjct: 121 NVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180

Query: 181 LRFAKPCRGVWRELMAAGTALKPTQYAILIAAAEDRVNWIELGSPGGNGAHHMRPCG 237
           LRFAKPCRGVWRELMAAGTALKPTQYAILIAAAEDRVNWIELGSPGGNGAHHMRPCG
Sbjct: 181 LRFAKPCRGVWRELMAAGTALKPTQYAILIAAAEDRVNWIELGSPGGNGAHHMRPCG 237

[Close]
BLAST of Csor.00g109400 vs. NCBI nr
Match: XP_022943567.1 (constitutive photomorphogenesis protein 10 [Cucurbita moschata] >XP_022986179.1 constitutive photomorphogenesis protein 10 [Cucurbita maxima] >XP_023512726.1 constitutive photomorphogenesis protein 10 isoform X1 [Cucurbita pepo subsp. pepo] >KAG7010225.1 Constitutive photomorphogenesis protein 10 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 387 bits (995), Expect = 5.35e-135
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0 

Query: 1   MVGNRDHRPQQPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60
           MVGNRDHRPQQPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS
Sbjct: 12  MVGNRDHRPQQPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 71

Query: 61  AGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSG 120
           AGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSG
Sbjct: 72  AGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSG 131

Query: 121 NVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180
           NVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT
Sbjct: 132 NVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 191

Query: 181 LRFAK 185
           LRFAK
Sbjct: 192 LRFAK 196

[Close]
BLAST of Csor.00g109400 vs. NCBI nr
Match: XP_038902201.1 (constitutive photomorphogenesis protein 10 isoform X2 [Benincasa hispida])

HSP 1 Score: 379 bits (973), Expect = 8.15e-132
Identity = 180/185 (97.30%), Postives = 182/185 (98.38%), Query Frame = 0 

Query: 1   MVGNRDHRPQQPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60
           MVGNRDHRPQ PLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS
Sbjct: 1   MVGNRDHRPQLPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60

Query: 61  AGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSG 120
           AGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDS+G
Sbjct: 61  AGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSAG 120

Query: 121 NVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180
           N SLDILKD+WSPALTIAKVLIAVKSIF NPNPYDPNAPGVAHLYLADRAKHDEIAAEWT
Sbjct: 121 NASLDILKDNWSPALTIAKVLIAVKSIFANPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180

Query: 181 LRFAK 185
           LRFAK
Sbjct: 181 LRFAK 185

[Close]
BLAST of Csor.00g109400 vs. NCBI nr
Match: XP_038902200.1 (constitutive photomorphogenesis protein 10 isoform X1 [Benincasa hispida])

HSP 1 Score: 377 bits (968), Expect = 1.32e-130
Identity = 179/184 (97.28%), Postives = 181/184 (98.37%), Query Frame = 0 

Query: 1   MVGNRDHRPQQPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60
           MVGNRDHRPQ PLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS
Sbjct: 1   MVGNRDHRPQLPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60

Query: 61  AGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSG 120
           AGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDS+G
Sbjct: 61  AGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSAG 120

Query: 121 NVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180
           N SLDILKD+WSPALTIAKVLIAVKSIF NPNPYDPNAPGVAHLYLADRAKHDEIAAEWT
Sbjct: 121 NASLDILKDNWSPALTIAKVLIAVKSIFANPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180

Query: 181 LRFA 184
           LRFA
Sbjct: 181 LRFA 184

[Close]
BLAST of Csor.00g109400 vs. NCBI nr
Match: XP_004142171.1 (constitutive photomorphogenesis protein 10 [Cucumis sativus] >KGN54065.1 hypothetical protein Csa_018040 [Cucumis sativus])

HSP 1 Score: 365 bits (936), Expect = 3.55e-126
Identity = 175/185 (94.59%), Postives = 177/185 (95.68%), Query Frame = 0 

Query: 1   MVGNRDHRPQQPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60
           MVGNRDHRP  P  GGGRSSSS SLA PTSWASTTSVSASGKRIQREMTEFNLDPPSDCS
Sbjct: 1   MVGNRDHRPPLPPLGGGRSSSSISLAAPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60

Query: 61  AGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSG 120
           AGPKGDNLYHWFATIFGP GTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDS+G
Sbjct: 61  AGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTG 120

Query: 121 NVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180
           NVSLDILKD+WSPALTIAKVLIAVKSIF NPNPYDPNAPGVAHLYLADRAKHDEIAAEWT
Sbjct: 121 NVSLDILKDNWSPALTIAKVLIAVKSIFANPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180

Query: 181 LRFAK 185
           LRFAK
Sbjct: 181 LRFAK 185

[Close]
BLAST of Csor.00g109400 vs. ExPASy TrEMBL
Match: A0A6J1JFC7 (constitutive photomorphogenesis protein 10 OS=Cucurbita maxima OX=3661 GN=LOC111483999 PE=4 SV=1)

HSP 1 Score: 387 bits (995), Expect = 2.59e-135
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0 

Query: 1   MVGNRDHRPQQPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60
           MVGNRDHRPQQPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS
Sbjct: 12  MVGNRDHRPQQPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 71

Query: 61  AGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSG 120
           AGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSG
Sbjct: 72  AGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSG 131

Query: 121 NVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180
           NVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT
Sbjct: 132 NVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 191

Query: 181 LRFAK 185
           LRFAK
Sbjct: 192 LRFAK 196

[Close]
BLAST of Csor.00g109400 vs. ExPASy TrEMBL
Match: A0A6J1FTD1 (constitutive photomorphogenesis protein 10 OS=Cucurbita moschata OX=3662 GN=LOC111448300 PE=4 SV=1)

HSP 1 Score: 387 bits (995), Expect = 2.59e-135
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0 

Query: 1   MVGNRDHRPQQPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60
           MVGNRDHRPQQPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS
Sbjct: 12  MVGNRDHRPQQPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 71

Query: 61  AGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSG 120
           AGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSG
Sbjct: 72  AGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSG 131

Query: 121 NVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180
           NVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT
Sbjct: 132 NVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 191

Query: 181 LRFAK 185
           LRFAK
Sbjct: 192 LRFAK 196

[Close]
BLAST of Csor.00g109400 vs. ExPASy TrEMBL
Match: A0A0A0KWU2 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G280420 PE=4 SV=1)

HSP 1 Score: 365 bits (936), Expect = 1.72e-126
Identity = 175/185 (94.59%), Postives = 177/185 (95.68%), Query Frame = 0 

Query: 1   MVGNRDHRPQQPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60
           MVGNRDHRP  P  GGGRSSSS SLA PTSWASTTSVSASGKRIQREMTEFNLDPPSDCS
Sbjct: 1   MVGNRDHRPPLPPLGGGRSSSSISLAAPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60

Query: 61  AGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSG 120
           AGPKGDNLYHWFATIFGP GTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDS+G
Sbjct: 61  AGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTG 120

Query: 121 NVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180
           NVSLDILKD+WSPALTIAKVLIAVKSIF NPNPYDPNAPGVAHLYLADRAKHDEIAAEWT
Sbjct: 121 NVSLDILKDNWSPALTIAKVLIAVKSIFANPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180

Query: 181 LRFAK 185
           LRFAK
Sbjct: 181 LRFAK 185

[Close]
BLAST of Csor.00g109400 vs. ExPASy TrEMBL
Match: A0A5D3DDP3 (Constitutive photomorphogenesis protein 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00610 PE=4 SV=1)

HSP 1 Score: 364 bits (934), Expect = 3.47e-126
Identity = 175/185 (94.59%), Postives = 177/185 (95.68%), Query Frame = 0 

Query: 1   MVGNRDHRPQQPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60
           MVGNRD RPQ P  GGGRSSSS SLA PTSWASTTSVSASGKRIQREMTEFNLDPPSDCS
Sbjct: 1   MVGNRDQRPQLPPLGGGRSSSSISLAAPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60

Query: 61  AGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSG 120
           AGPKGDNLYHWFATIFGP GTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDS+G
Sbjct: 61  AGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTG 120

Query: 121 NVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180
           NVSLDILKD+WSPALTIAKVLIAVKSIF NPNPYDPNAPGVAHLYLADRAKHDEIAAEWT
Sbjct: 121 NVSLDILKDNWSPALTIAKVLIAVKSIFVNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180

Query: 181 LRFAK 185
           LRFAK
Sbjct: 181 LRFAK 185

[Close]
BLAST of Csor.00g109400 vs. ExPASy TrEMBL
Match: A0A1S3BMW7 (constitutive photomorphogenesis protein 10 OS=Cucumis melo OX=3656 GN=LOC103491591 PE=4 SV=1)

HSP 1 Score: 364 bits (934), Expect = 3.47e-126
Identity = 175/185 (94.59%), Postives = 177/185 (95.68%), Query Frame = 0 

Query: 1   MVGNRDHRPQQPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60
           MVGNRD RPQ P  GGGRSSSS SLA PTSWASTTSVSASGKRIQREMTEFNLDPPSDCS
Sbjct: 1   MVGNRDQRPQLPPLGGGRSSSSISLAAPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60

Query: 61  AGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSG 120
           AGPKGDNLYHWFATIFGP GTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDS+G
Sbjct: 61  AGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTG 120

Query: 121 NVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180
           NVSLDILKD+WSPALTIAKVLIAVKSIF NPNPYDPNAPGVAHLYLADRAKHDEIAAEWT
Sbjct: 121 NVSLDILKDNWSPALTIAKVLIAVKSIFVNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180

Query: 181 LRFAK 185
           LRFAK
Sbjct: 181 LRFAK 185

[Close]
BLAST of Csor.00g109400 vs. TAIR 10
Match: AT3G13550.1 (Ubiquitin-conjugating enzyme family protein )

HSP 1 Score: 265.8 bits (678), Expect = 3.4e-71
Identity = 120/157 (76.43%), Postives = 135/157 (85.99%), Query Frame = 0 

Query: 29  TSWASTTSVSASGKRIQREMTEFNLDPPSDCSAGPKGDNLYHWFATIFGPPGTPYEGGIF 88
           +SW + TSVSASGKRIQREM E N+DPP DCSAGPKGDNLYHW ATI GP GTPYEGGIF
Sbjct: 26  SSWVAKTSVSASGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIF 85

Query: 89  FLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSGNVSLDILKDSWSPALTIAKVLIAVKSIF 148
           FLDIIFPSDYPF PPK+VFKTRIYHCNVD++G++S++IL+DSWSPALTI KVL A++SIF
Sbjct: 86  FLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIF 145

Query: 149 TNPNPYDPNAPGVAHLYLADRAKHDEIAAEWTLRFAK 186
             P PY P  P +A LYL DR KHDE+A EWTLRFAK
Sbjct: 146 LKPEPYSPALPVIARLYLTDREKHDEVAKEWTLRFAK 182

[Close]
BLAST of Csor.00g109400 vs. TAIR 10
Match: AT3G13550.2 (Ubiquitin-conjugating enzyme family protein )

HSP 1 Score: 218.4 bits (555), Expect = 6.2e-57
Identity = 98/125 (78.40%), Postives = 111/125 (88.80%), Query Frame = 0 

Query: 29  TSWASTTSVSASGKRIQREMTEFNLDPPSDCSAGPKGDNLYHWFATIFGPPGTPYEGGIF 88
           +SW + TSVSASGKRIQREM E N+DPP DCSAGPKGDNLYHW ATI GP GTPYEGGIF
Sbjct: 26  SSWVAKTSVSASGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIF 85

Query: 89  FLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSGNVSLDILKDSWSPALTIAKVLIAVKSIF 148
           FLDIIFPSDYPF PPK+VFKTRIYHCNVD++G++S++IL+DSWSPALTI KVL A++SIF
Sbjct: 86  FLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIF 145

Query: 149 TNPNP 154
             P P
Sbjct: 146 LKPEP 150

[Close]
BLAST of Csor.00g109400 vs. TAIR 10
Match: AT3G08690.1 (ubiquitin-conjugating enzyme 11 )

HSP 1 Score: 189.1 bits (479), Expect = 4.0e-48
Identity = 78/145 (53.79%), Postives = 111/145 (76.55%), Query Frame = 0 

Query: 40  SGKRIQREMTEFNLDPPSDCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYP 99
           + KRI +E+ +   DPPS+CSAGP  ++++HW ATI GPP +PY GG+F + I FP DYP
Sbjct: 2   ASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYP 61

Query: 100 FNPPKVVFKTRIYHCNVDSSGNVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAP 159
           F PPKV FKT++YH N++S+G++ LDILK+ WSPALTI+KVL+++ S+ T+PNP DP  P
Sbjct: 62  FKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121

Query: 160 GVAHLYLADRAKHDEIAAEWTLRFA 185
            +AH+Y  DR+K++  A  WT ++A
Sbjct: 122 EIAHMYKTDRSKYESTARSWTQKYA 146

[Close]
BLAST of Csor.00g109400 vs. TAIR 10
Match: AT3G08690.2 (ubiquitin-conjugating enzyme 11 )

HSP 1 Score: 189.1 bits (479), Expect = 4.0e-48
Identity = 78/145 (53.79%), Postives = 111/145 (76.55%), Query Frame = 0 

Query: 40  SGKRIQREMTEFNLDPPSDCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYP 99
           + KRI +E+ +   DPPS+CSAGP  ++++HW ATI GPP +PY GG+F + I FP DYP
Sbjct: 2   ASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYP 61

Query: 100 FNPPKVVFKTRIYHCNVDSSGNVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAP 159
           F PPKV FKT++YH N++S+G++ LDILK+ WSPALTI+KVL+++ S+ T+PNP DP  P
Sbjct: 62  FKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121

Query: 160 GVAHLYLADRAKHDEIAAEWTLRFA 185
            +AH+Y  DR+K++  A  WT ++A
Sbjct: 122 EIAHMYKTDRSKYESTARSWTQKYA 146

[Close]
BLAST of Csor.00g109400 vs. TAIR 10
Match: AT2G16740.1 (ubiquitin-conjugating enzyme 29 )

HSP 1 Score: 188.3 bits (477), Expect = 6.9e-48
Identity = 77/143 (53.85%), Postives = 110/143 (76.92%), Query Frame = 0 

Query: 42  KRIQREMTEFNLDPPSDCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFN 101
           +RI +E+ E   DPP  CSAGP G++++HW ATI GP  +PY GG+F ++I FP DYPF 
Sbjct: 4   RRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFK 63

Query: 102 PPKVVFKTRIYHCNVDSSGNVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGV 161
           PPKVVF+T+++H N++S+GN+ LDILKD WSPALTI+KVL+++ S+ T+PNP DP  P +
Sbjct: 64  PPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123

Query: 162 AHLYLADRAKHDEIAAEWTLRFA 185
           AH+Y  D+ K++ +A  WT ++A
Sbjct: 124 AHIYKTDKTKYEAMARSWTQKYA 146

The following BLAST results are available for this feature:
BLAST of Csor.00g109400 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LJD74.8e-7076.43Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana OX=3702 GN=CO... [more]
Q2T9X76.3e-5456.04Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus OX=9913 GN=UBE2E3 PE=2 SV=1[more]
Q969T46.3e-5456.04Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens OX=9606 GN=UBE2E3 PE=1 SV=1[more]
P524836.3e-5456.04Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus OX=10090 GN=Ube2e3 PE=1 SV=2[more]
Q91W821.5e-5254.19Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus OX=10090 GN=Ube2e2 PE=2 SV=1[more]
BLAST of Csor.00g109400 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6570333.18.34e-178100.00Constitutive photomorphogenesis protein 10, partial [Cucurbita argyrosperma subs... [more]
XP_022943567.15.35e-135100.00constitutive photomorphogenesis protein 10 [Cucurbita moschata] >XP_022986179.1 ... [more]
XP_038902201.18.15e-13297.30constitutive photomorphogenesis protein 10 isoform X2 [Benincasa hispida][more]
XP_038902200.11.32e-13097.28constitutive photomorphogenesis protein 10 isoform X1 [Benincasa hispida][more]
XP_004142171.13.55e-12694.59constitutive photomorphogenesis protein 10 [Cucumis sativus] >KGN54065.1 hypothe... [more]
BLAST of Csor.00g109400 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JFC72.59e-135100.00constitutive photomorphogenesis protein 10 OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1FTD12.59e-135100.00constitutive photomorphogenesis protein 10 OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A0A0KWU21.72e-12694.59UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G280420 PE... [more]
A0A5D3DDP33.47e-12694.59Constitutive photomorphogenesis protein 10 OS=Cucumis melo var. makuwa OX=119469... [more]
A0A1S3BMW73.47e-12694.59constitutive photomorphogenesis protein 10 OS=Cucumis melo OX=3656 GN=LOC1034915... [more]
BLAST of Csor.00g109400 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G13550.13.4e-7176.43Ubiquitin-conjugating enzyme family protein [more]
AT3G13550.26.2e-5778.40Ubiquitin-conjugating enzyme family protein [more]
AT3G08690.14.0e-4853.79ubiquitin-conjugating enzyme 11 [more]
AT3G08690.24.0e-4853.79ubiquitin-conjugating enzyme 11 [more]
AT2G16740.16.9e-4853.85ubiquitin-conjugating enzyme 29 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 42..185
e-value: 2.5E-60
score: 216.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
NoneNo IPR availablePANTHERPTHR24068:SF62UBIQUITIN-CONJUGATING ENZYME E2 E2coord: 26..184
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 26..184
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 43..178
e-value: 3.2E-42
score: 143.5
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 39..185
score: 50.61013
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 42..180
e-value: 1.07769E-61
score: 188.18
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 31..186
e-value: 6.3E-59
score: 200.1
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 29..185

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g109400.m01Csor.00g109400.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000209 protein polyubiquitination
biological_process GO:0010099 regulation of photomorphogenesis
cellular_component GO:0005634 nucleus
molecular_function GO:0016874 ligase activity
molecular_function GO:0061631 ubiquitin conjugating enzyme activity