Csor.00g109230 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g109230
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	importin-5
Location	Csor_Chr20: 31624 .. 32331 (-)
RNA-Seq Expression	Csor.00g109230
Synteny	Csor.00g109230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGCTGTTCTCCTCCGCAAGCAGCTAACTCGCGACGATTCCTACCTCTGGCCTCGCCTAAATCCTTCCTCTCAGTTCTCTCTCAAATCCATACTCCTCTCATGTATTCAAAGCGAGGACTCCAAATCCATATCGAAGAAATTGTGTGATACGGTCTCCGAGCTGGCTTCCGGAATCTTGCCGGATAATGGCTGGCCAGAATGGTTGCCGTTCATGTTTCAGTGCGTATCGTCGGATTCCCTCAAGCTGCAGGAATCGGCTTTCTTGATTTTTGCCCAGCTTTCGCATTCTACTGGGGATACCTTGGTGCCCCACATTAAGCACTTGCACGGTGTGTTTTTGCAGTGCTTGACGTCAGCCTCCCCAAGCACCGATGTGAAGATTGCGTCCTTCAATGCTGTTATCAGCTTCGTACAGTGCTTGTCCAACTCTGCTGATCGTGACAGGTTTCAGGATTTGCTGCGACCGATGACGCGGACACTAATGGAGTCGTTGGATAACGCGCAGGAGGCAACCGCGCAAGGGGTACTTGAACTGTTGATCGAATTGGCCGGGACGGAGGCGAGGTTCTTAAGGCGGCAATTAGTGGATACAGTGGGGTTGATGCTGCAAATTGCAGAAGCTGAATCGTTGGACGAAGGAACGAGGCACTTGGCGATTGAATTTGTATTCGCTCTTGCAGAAGCCAGGGAGCGGCAGTTTTGA

mRNA sequence

ATGTCTGCTGTTCTCCTCCGCAAGCAGCTAACTCGCGACGATTCCTACCTCTGGCCTCGCCTAAATCCTTCCTCTCAGTTCTCTCTCAAATCCATACTCCTCTCATGTATTCAAAGCGAGGACTCCAAATCCATATCGAAGAAATTGTGTGATACGGTCTCCGAGCTGGCTTCCGGAATCTTGCCGGATAATGGCTGGCCAGAATGGTTGCCGTTCATGTTTCAGTGCGTATCGTCGGATTCCCTCAAGCTGCAGGAATCGGCTTTCTTGATTTTTGCCCAGCTTTCGCATTCTACTGGGGATACCTTGGTGCCCCACATTAAGCACTTGCACGGTGTGTTTTTGCAGTGCTTGACGTCAGCCTCCCCAAGCACCGATGTGAAGATTGCGTCCTTCAATGCTGTTATCAGCTTCGTACAGTGCTTGTCCAACTCTGCTGATCGTGACAGGTTTCAGGATTTGCTGCGACCGATGACGCGGACACTAATGGAGTCGTTGGATAACGCGCAGGAGGCAACCGCGCAAGGGGTACTTGAACTGTTGATCGAATTGGCCGGGACGGAGGCGAGGTTCTTAAGGCGGCAATTAGTGGATACAGTGGGGTTGATGCTGCAAATTGCAGAAGCTGAATCGTTGGACGAAGGAACGAGGCACTTGGCGATTGAATTTGTATTCGCTCTTGCAGAAGCCAGGGAGCGGCAGTTTTGA

Coding sequence (CDS)

ATGTCTGCTGTTCTCCTCCGCAAGCAGCTAACTCGCGACGATTCCTACCTCTGGCCTCGCCTAAATCCTTCCTCTCAGTTCTCTCTCAAATCCATACTCCTCTCATGTATTCAAAGCGAGGACTCCAAATCCATATCGAAGAAATTGTGTGATACGGTCTCCGAGCTGGCTTCCGGAATCTTGCCGGATAATGGCTGGCCAGAATGGTTGCCGTTCATGTTTCAGTGCGTATCGTCGGATTCCCTCAAGCTGCAGGAATCGGCTTTCTTGATTTTTGCCCAGCTTTCGCATTCTACTGGGGATACCTTGGTGCCCCACATTAAGCACTTGCACGGTGTGTTTTTGCAGTGCTTGACGTCAGCCTCCCCAAGCACCGATGTGAAGATTGCGTCCTTCAATGCTGTTATCAGCTTCGTACAGTGCTTGTCCAACTCTGCTGATCGTGACAGGTTTCAGGATTTGCTGCGACCGATGACGCGGACACTAATGGAGTCGTTGGATAACGCGCAGGAGGCAACCGCGCAAGGGGTACTTGAACTGTTGATCGAATTGGCCGGGACGGAGGCGAGGTTCTTAAGGCGGCAATTAGTGGATACAGTGGGGTTGATGCTGCAAATTGCAGAAGCTGAATCGTTGGACGAAGGAACGAGGCACTTGGCGATTGAATTTGTATTCGCTCTTGCAGAAGCCAGGGAGCGGCAGTTTTGA

Protein sequence

MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLQCLTSASPSTDVKIASFNAVISFVQCLSNSADRDRFQDLLRPMTRTLMESLDNAQEATAQGVLELLIELAGTEARFLRRQLVDTVGLMLQIAEAESLDEGTRHLAIEFVFALAEARERQF

Homology

[Close]

BLAST of Csor.00g109230 vs. ExPASy Swiss-Prot
Match: O00410 (Importin-5 OS=Homo sapiens OX=9606 GN=IPO5 PE=1 SV=4)

HSP 1 Score: 98.6 bits (244), Expect = 1.0e-19
Identity = 73/233 (31.33%), Postives = 120/233 (51.50%), Query Frame = 0


Query: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGI 60
           M+AVLLR+ L+     ++P L    Q ++KS LL  IQ E   S+ KK+CD  +ELA  +
Sbjct: 61  MAAVLLRRLLSSAFDEVYPALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNL 120

Query: 61  LPDNG---WPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLQC 120
           + ++G   WPE L F+F  VSS ++ L+E+A  IF       G+    ++  +  + +QC
Sbjct: 121 IDEDGNNQWPEGLKFLFDSVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQC 180

Query: 121 LTSASPSTDVKIASFNAVISFVQCLS-NSADRDRFQDLLRPMTRTLMESLDNAQEATAQG 180
           +        ++  S  A  +F+     N A    F DLL    + + +S     ++    
Sbjct: 181 MQD-QEHPSIRTLSARATAAFILANEHNVALFKHFADLLPGFLQAVNDSCYQNDDS---- 240

Query: 181 VLELLIELAGTEARFLRRQLVDTVGLMLQIAEAESLDEGTRHLAIEFVFALAE 230
           VL+ L+E+A T  ++LR  L  T+ L L++    SL+   R LA+E +  L+E
Sbjct: 241 VLKSLVEIADTVPKYLRPHLEATLQLSLKLCGDTSLNNMQRQLALEVIVTLSE 288

[Close]

BLAST of Csor.00g109230 vs. ExPASy Swiss-Prot
Match: Q8BKC5 (Importin-5 OS=Mus musculus OX=10090 GN=Ipo5 PE=1 SV=3)

HSP 1 Score: 98.2 bits (243), Expect = 1.3e-19
Identity = 72/233 (30.90%), Postives = 120/233 (51.50%), Query Frame = 0


Query: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGI 60
           M+AVLLR+ L+     ++P L    Q ++KS LL  IQ E   S+ KK+CD  +ELA  +
Sbjct: 61  MAAVLLRRLLSSAFDEVYPALPSDVQTAIKSELLMIIQMETQSSMRKKICDIAAELARNL 120

Query: 61  LPDNG---WPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLQC 120
           + ++G   WPE L F+F  VSS ++ L+E+A  IF       G+    ++  +  + +QC
Sbjct: 121 IDEDGNNQWPEGLKFLFDSVSSQNMGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQC 180

Query: 121 LTSASPSTDVKIASFNAVISFVQCLS-NSADRDRFQDLLRPMTRTLMESLDNAQEATAQG 180
           +        ++  S  A  +F+     N A    F DLL    + + +S     ++    
Sbjct: 181 MQD-QEHPSIRTLSARATAAFILANEHNVALFKHFADLLPGFLQAVNDSCYQNDDS---- 240

Query: 181 VLELLIELAGTEARFLRRQLVDTVGLMLQIAEAESLDEGTRHLAIEFVFALAE 230
           VL+ L+E+A T  ++LR  L  T+ L L++    +L+   R LA+E +  L+E
Sbjct: 241 VLKSLVEIADTVPKYLRPHLEATLQLSLKLCGDTNLNNMQRQLALEVIVTLSE 288

[Close]

BLAST of Csor.00g109230 vs. ExPASy Swiss-Prot
Match: Q54EW3 (Probable importin-5 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0291650 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 5.3e-13
Identity = 56/229 (24.45%), Postives = 108/229 (47.16%), Query Frame = 0


Query: 4   VLLRKQLTRDDS-YLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILP 63
           VLLR  +  +DS  +   L P +  +LK+ L+  ++ E    I   + + ++ LA  ++P
Sbjct: 61  VLLRTLVNGNDSGNILKGLKPETLVTLKTELMFAVREEPKNHIRHSILNVIAILAIQLVP 120

Query: 64  DNGWPEWLPFMFQCVSSDSLKLQESAFLIFAQL--SHSTGDTLVPHIKHLHGVFLQCLTS 123
           +  WPE L F+ +  SS    L+ES+F +   +       +TL PH      +  + L  
Sbjct: 121 EQKWPEILSFIIESSSSPEENLRESSFYLIGAIIDDSRVAETLAPHFDKFALLVEKGLN- 180

Query: 124 ASPSTDVKIASFNAVISFVQCLSNSADRDRFQDLLRPMTRTLMESLDNAQEATAQGVLEL 183
             PS  V++++   V +F+   +N    + F+ L+  M  T+ +++++  E  AQ  +  
Sbjct: 181 -DPSAKVQVSALETVSTFID--ANPEKAEVFKPLIPAMLNTIQKTIESNLEKEAQKGILT 240

Query: 184 LIELAGTEARFLRRQLVDTVGLMLQIAEAESLDEGTRHLAIEFVFALAE 230
            I +A   + + +        +  Q  E +SL++ T+H  + F    AE
Sbjct: 241 FIIIAQYHSDWFKTNFDMIFKVFFQFLEHQSLEDETKHACLHFFLTFAE 285

[Close]

BLAST of Csor.00g109230 vs. ExPASy Swiss-Prot
Match: O74476 (Importin subunit beta-3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sal3 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.8e-08
Identity = 57/212 (26.89%), Postives = 90/212 (42.45%), Query Frame = 0


Query: 21  LNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNG-WPEWLPFMFQCVSS 80
           ++  S+ SL+S LL+C   E   ++  KLCDT++E+A  I    G WPE +  +F  V+S
Sbjct: 91  ISNESKQSLQSQLLACFVKESVPTVRNKLCDTIAEIARSIYDCQGEWPELINVIFNAVNS 150

Query: 81  DSLKLQESAFLIFAQLSH--STGDTLVPHIKHLHGVFLQCLTSASPSTDVKIASFNAVIS 140
                +ES F     L    S  D+ V  +      F   L  A PS  V+I++  A  S
Sbjct: 151 PDESFRESVFRTITSLPRLLSGQDSAVTPL------FTTGL--ADPSIRVRISAARA-YS 210

Query: 141 FVQCLSNSADRDRFQDLLRPMTRTLMESLDNAQEATAQGVLELLIELAGTEARFLRRQLV 200
            V   S  + RD+   LL  +   L     +         L  + E+A    +  +    
Sbjct: 211 AVILESKQSTRDQVIPLLPSLMNILPPLQQDRDSDNLADCLMAITEIAEVFPKLFKPIFE 270

Query: 201 DTVGLMLQIAEAESLDEGTRHLAIEFVFALAE 230
             +   L I + + LD   R  A+E +   +E
Sbjct: 271 SVIAFGLGIIKDKELDNSARQAALELLVCFSE 293

[Close]

BLAST of Csor.00g109230 vs. NCBI nr
Match: KAG6570316.1 (Importin-5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 459 bits (1182), Expect = 6.28e-163
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGI 60
           MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGI
Sbjct: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGI 60

Query: 61  LPDNGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLQCLTS 120
           LPDNGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLQCLTS
Sbjct: 61  LPDNGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLQCLTS 120

Query: 121 ASPSTDVKIASFNAVISFVQCLSNSADRDRFQDLLRPMTRTLMESLDNAQEATAQGVLEL 180
           ASPSTDVKIASFNAVISFVQCLSNSADRDRFQDLLRPMTRTLMESLDNAQEATAQGVLEL
Sbjct: 121 ASPSTDVKIASFNAVISFVQCLSNSADRDRFQDLLRPMTRTLMESLDNAQEATAQGVLEL 180

Query: 181 LIELAGTEARFLRRQLVDTVGLMLQIAEAESLDEGTRHLAIEFVFALAEARERQF 235
           LIELAGTEARFLRRQLVDTVGLMLQIAEAESLDEGTRHLAIEFVFALAEARERQF
Sbjct: 181 LIELAGTEARFLRRQLVDTVGLMLQIAEAESLDEGTRHLAIEFVFALAEARERQF 235

[Close]

BLAST of Csor.00g109230 vs. NCBI nr
Match: XP_038900351.1 (importin-5 isoform X2 [Benincasa hispida])

HSP 1 Score: 404 bits (1038), Expect = 3.62e-132
Identity = 209/233 (89.70%), Postives = 214/233 (91.85%), Query Frame = 0


Query: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGI 60
           MSAVLLRKQLTRDDSYLWPRLNPSSQ SLKSILLSCIQ EDSKSISKKLCDTVSELASGI
Sbjct: 76  MSAVLLRKQLTRDDSYLWPRLNPSSQSSLKSILLSCIQREDSKSISKKLCDTVSELASGI 135

Query: 61  LPDNGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLQCLTS 120
           LPDNGWPE LPFMFQCVSSD+ KLQESAFLIFAQLSH  GDTLVPHIKHLHGVFLQCLTS
Sbjct: 136 LPDNGWPELLPFMFQCVSSDTPKLQESAFLIFAQLSHYIGDTLVPHIKHLHGVFLQCLTS 195

Query: 121 ASPSTDVKIASFNAVISFVQCLSNSADRDRFQDLLRPMTRTLMESLDNAQEATAQGVLEL 180
            S STDVKIA+ NAVISF+QCLSNSADRDRFQDLL PM RTLME+L+N QEATAQ  LEL
Sbjct: 196 TSSSTDVKIAALNAVISFIQCLSNSADRDRFQDLLPPMMRTLMEALNNGQEATAQEALEL 255

Query: 181 LIELAGTEARFLRRQLVDTVGLMLQIAEAESLDEGTRHLAIEFVFALAEARER 233
           LIELAGTE RFLRRQLVD VG MLQIAEAESLDEGTRHLAIEFV  LAEARER
Sbjct: 256 LIELAGTEPRFLRRQLVDVVGSMLQIAEAESLDEGTRHLAIEFVITLAEARER 308

[Close]

BLAST of Csor.00g109230 vs. NCBI nr
Match: KAE8649420.1 (hypothetical protein Csa_021659 [Cucumis sativus])

HSP 1 Score: 403 bits (1035), Expect = 2.93e-130
Identity = 208/233 (89.27%), Postives = 214/233 (91.85%), Query Frame = 0


Query: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGI 60
           M+AVLLRKQLTRDDSYLWPRLNPSSQ SLKSILLSCIQ EDSKSISKKLCDTVSELASGI
Sbjct: 45  MAAVLLRKQLTRDDSYLWPRLNPSSQSSLKSILLSCIQREDSKSISKKLCDTVSELASGI 104

Query: 61  LPDNGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLQCLTS 120
           LPDNGWPE LPFMFQCVSSDS KLQESAFLIFAQLSH  GDTLVPHIKHLHGVFLQCLTS
Sbjct: 105 LPDNGWPELLPFMFQCVSSDSPKLQESAFLIFAQLSHYIGDTLVPHIKHLHGVFLQCLTS 164

Query: 121 ASPSTDVKIASFNAVISFVQCLSNSADRDRFQDLLRPMTRTLMESLDNAQEATAQGVLEL 180
            + STDVKIA+ NAVISF+QCLSNSADRDRFQDLL PM RTLME+L+N QEATAQ  LEL
Sbjct: 165 TTSSTDVKIAALNAVISFIQCLSNSADRDRFQDLLPPMMRTLMEALNNGQEATAQEALEL 224

Query: 181 LIELAGTEARFLRRQLVDTVGLMLQIAEAESLDEGTRHLAIEFVFALAEARER 233
           LIELAGTE RFLRRQLVD VG MLQIAEAESLDEGTRHLAIEFV  LAEARER
Sbjct: 225 LIELAGTEPRFLRRQLVDVVGSMLQIAEAESLDEGTRHLAIEFVITLAEARER 277

[Close]

BLAST of Csor.00g109230 vs. NCBI nr
Match: KAA0040107.1 (importin-5 [Cucumis melo var. makuwa] >TYK21732.1 importin-5 [Cucumis melo var. makuwa])

HSP 1 Score: 403 bits (1035), Expect = 3.12e-130
Identity = 208/233 (89.27%), Postives = 214/233 (91.85%), Query Frame = 0


Query: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGI 60
           M+AVLLRKQLTRDDSYLWPRLNPSSQ SLKSILLSCIQ EDSKSISKKLCDTVSELASGI
Sbjct: 76  MAAVLLRKQLTRDDSYLWPRLNPSSQSSLKSILLSCIQREDSKSISKKLCDTVSELASGI 135

Query: 61  LPDNGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLQCLTS 120
           LPDNGWPE LPFMFQCVSSDS KLQESAFLIFAQLSH  GDTLVPHIKHLHGVFLQCLTS
Sbjct: 136 LPDNGWPELLPFMFQCVSSDSPKLQESAFLIFAQLSHYIGDTLVPHIKHLHGVFLQCLTS 195

Query: 121 ASPSTDVKIASFNAVISFVQCLSNSADRDRFQDLLRPMTRTLMESLDNAQEATAQGVLEL 180
            + STDVKIA+ NAVISF+QCLSNSADRDRFQDLL PM RTLME+L+N QEATAQ  LEL
Sbjct: 196 TTSSTDVKIAALNAVISFIQCLSNSADRDRFQDLLPPMMRTLMEALNNGQEATAQEALEL 255

Query: 181 LIELAGTEARFLRRQLVDTVGLMLQIAEAESLDEGTRHLAIEFVFALAEARER 233
           LIELAGTE RFLRRQLVD VG MLQIAEAESLDEGTRHLAIEFV  LAEARER
Sbjct: 256 LIELAGTEPRFLRRQLVDVVGSMLQIAEAESLDEGTRHLAIEFVITLAEARER 308

[Close]

BLAST of Csor.00g109230 vs. NCBI nr
Match: XP_038900350.1 (importin-5 isoform X1 [Benincasa hispida])

HSP 1 Score: 404 bits (1038), Expect = 3.89e-130
Identity = 209/233 (89.70%), Postives = 214/233 (91.85%), Query Frame = 0


Query: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGI 60
           MSAVLLRKQLTRDDSYLWPRLNPSSQ SLKSILLSCIQ EDSKSISKKLCDTVSELASGI
Sbjct: 76  MSAVLLRKQLTRDDSYLWPRLNPSSQSSLKSILLSCIQREDSKSISKKLCDTVSELASGI 135

Query: 61  LPDNGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLQCLTS 120
           LPDNGWPE LPFMFQCVSSD+ KLQESAFLIFAQLSH  GDTLVPHIKHLHGVFLQCLTS
Sbjct: 136 LPDNGWPELLPFMFQCVSSDTPKLQESAFLIFAQLSHYIGDTLVPHIKHLHGVFLQCLTS 195

Query: 121 ASPSTDVKIASFNAVISFVQCLSNSADRDRFQDLLRPMTRTLMESLDNAQEATAQGVLEL 180
            S STDVKIA+ NAVISF+QCLSNSADRDRFQDLL PM RTLME+L+N QEATAQ  LEL
Sbjct: 196 TSSSTDVKIAALNAVISFIQCLSNSADRDRFQDLLPPMMRTLMEALNNGQEATAQEALEL 255

Query: 181 LIELAGTEARFLRRQLVDTVGLMLQIAEAESLDEGTRHLAIEFVFALAEARER 233
           LIELAGTE RFLRRQLVD VG MLQIAEAESLDEGTRHLAIEFV  LAEARER
Sbjct: 256 LIELAGTEPRFLRRQLVDVVGSMLQIAEAESLDEGTRHLAIEFVITLAEARER 308

[Close]

BLAST of Csor.00g109230 vs. ExPASy TrEMBL
Match: A0A5A7TEZ0 (Importin-5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G001040 PE=4 SV=1)

HSP 1 Score: 403 bits (1035), Expect = 1.51e-130
Identity = 208/233 (89.27%), Postives = 214/233 (91.85%), Query Frame = 0


Query: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGI 60
           M+AVLLRKQLTRDDSYLWPRLNPSSQ SLKSILLSCIQ EDSKSISKKLCDTVSELASGI
Sbjct: 76  MAAVLLRKQLTRDDSYLWPRLNPSSQSSLKSILLSCIQREDSKSISKKLCDTVSELASGI 135

Query: 61  LPDNGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLQCLTS 120
           LPDNGWPE LPFMFQCVSSDS KLQESAFLIFAQLSH  GDTLVPHIKHLHGVFLQCLTS
Sbjct: 136 LPDNGWPELLPFMFQCVSSDSPKLQESAFLIFAQLSHYIGDTLVPHIKHLHGVFLQCLTS 195

Query: 121 ASPSTDVKIASFNAVISFVQCLSNSADRDRFQDLLRPMTRTLMESLDNAQEATAQGVLEL 180
            + STDVKIA+ NAVISF+QCLSNSADRDRFQDLL PM RTLME+L+N QEATAQ  LEL
Sbjct: 196 TTSSTDVKIAALNAVISFIQCLSNSADRDRFQDLLPPMMRTLMEALNNGQEATAQEALEL 255

Query: 181 LIELAGTEARFLRRQLVDTVGLMLQIAEAESLDEGTRHLAIEFVFALAEARER 233
           LIELAGTE RFLRRQLVD VG MLQIAEAESLDEGTRHLAIEFV  LAEARER
Sbjct: 256 LIELAGTEPRFLRRQLVDVVGSMLQIAEAESLDEGTRHLAIEFVITLAEARER 308

[Close]

BLAST of Csor.00g109230 vs. ExPASy TrEMBL
Match: A0A0A0L0C1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G268110 PE=4 SV=1)

HSP 1 Score: 403 bits (1035), Expect = 4.20e-130
Identity = 208/233 (89.27%), Postives = 214/233 (91.85%), Query Frame = 0


Query: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGI 60
           M+AVLLRKQLTRDDSYLWPRLNPSSQ SLKSILLSCIQ EDSKSISKKLCDTVSELASGI
Sbjct: 76  MAAVLLRKQLTRDDSYLWPRLNPSSQSSLKSILLSCIQREDSKSISKKLCDTVSELASGI 135

Query: 61  LPDNGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLQCLTS 120
           LPDNGWPE LPFMFQCVSSDS KLQESAFLIFAQLSH  GDTLVPHIKHLHGVFLQCLTS
Sbjct: 136 LPDNGWPELLPFMFQCVSSDSPKLQESAFLIFAQLSHYIGDTLVPHIKHLHGVFLQCLTS 195

Query: 121 ASPSTDVKIASFNAVISFVQCLSNSADRDRFQDLLRPMTRTLMESLDNAQEATAQGVLEL 180
            + STDVKIA+ NAVISF+QCLSNSADRDRFQDLL PM RTLME+L+N QEATAQ  LEL
Sbjct: 196 TTSSTDVKIAALNAVISFIQCLSNSADRDRFQDLLPPMMRTLMEALNNGQEATAQEALEL 255

Query: 181 LIELAGTEARFLRRQLVDTVGLMLQIAEAESLDEGTRHLAIEFVFALAEARER 233
           LIELAGTE RFLRRQLVD VG MLQIAEAESLDEGTRHLAIEFV  LAEARER
Sbjct: 256 LIELAGTEPRFLRRQLVDVVGSMLQIAEAESLDEGTRHLAIEFVITLAEARER 308

[Close]

BLAST of Csor.00g109230 vs. ExPASy TrEMBL
Match: A0A1S3BNQ2 (importin-5 OS=Cucumis melo OX=3656 GN=LOC103491628 PE=4 SV=1)

HSP 1 Score: 403 bits (1035), Expect = 4.20e-130
Identity = 208/233 (89.27%), Postives = 214/233 (91.85%), Query Frame = 0


Query: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGI 60
           M+AVLLRKQLTRDDSYLWPRLNPSSQ SLKSILLSCIQ EDSKSISKKLCDTVSELASGI
Sbjct: 76  MAAVLLRKQLTRDDSYLWPRLNPSSQSSLKSILLSCIQREDSKSISKKLCDTVSELASGI 135

Query: 61  LPDNGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLQCLTS 120
           LPDNGWPE LPFMFQCVSSDS KLQESAFLIFAQLSH  GDTLVPHIKHLHGVFLQCLTS
Sbjct: 136 LPDNGWPELLPFMFQCVSSDSPKLQESAFLIFAQLSHYIGDTLVPHIKHLHGVFLQCLTS 195

Query: 121 ASPSTDVKIASFNAVISFVQCLSNSADRDRFQDLLRPMTRTLMESLDNAQEATAQGVLEL 180
            + STDVKIA+ NAVISF+QCLSNSADRDRFQDLL PM RTLME+L+N QEATAQ  LEL
Sbjct: 196 TTSSTDVKIAALNAVISFIQCLSNSADRDRFQDLLPPMMRTLMEALNNGQEATAQEALEL 255

Query: 181 LIELAGTEARFLRRQLVDTVGLMLQIAEAESLDEGTRHLAIEFVFALAEARER 233
           LIELAGTE RFLRRQLVD VG MLQIAEAESLDEGTRHLAIEFV  LAEARER
Sbjct: 256 LIELAGTEPRFLRRQLVDVVGSMLQIAEAESLDEGTRHLAIEFVITLAEARER 308

[Close]

BLAST of Csor.00g109230 vs. ExPASy TrEMBL
Match: A0A6J1DJS8 (importin-5-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021191 PE=4 SV=1)

HSP 1 Score: 400 bits (1029), Expect = 2.49e-129
Identity = 207/233 (88.84%), Postives = 212/233 (90.99%), Query Frame = 0


Query: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGI 60
           MSAVLLRKQLTRDDSYLWPRLNPSSQ SLKSILLSCIQ E+SKSISKKLCDTVSELASGI
Sbjct: 76  MSAVLLRKQLTRDDSYLWPRLNPSSQSSLKSILLSCIQREESKSISKKLCDTVSELASGI 135

Query: 61  LPDNGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLQCLTS 120
           LPDNGWPE LPFMFQCVSSDS KLQESAFLIFAQLSH  GDTLVPHIKHLHGVFLQCLTS
Sbjct: 136 LPDNGWPELLPFMFQCVSSDSPKLQESAFLIFAQLSHYIGDTLVPHIKHLHGVFLQCLTS 195

Query: 121 ASPSTDVKIASFNAVISFVQCLSNSADRDRFQDLLRPMTRTLMESLDNAQEATAQGVLEL 180
            S STDVKIA+ NAVISF+QCLSNS DRDRFQDLL PM RTLME+L+N QE TAQ  LEL
Sbjct: 196 TSSSTDVKIAALNAVISFIQCLSNSGDRDRFQDLLPPMMRTLMEALNNGQETTAQEALEL 255

Query: 181 LIELAGTEARFLRRQLVDTVGLMLQIAEAESLDEGTRHLAIEFVFALAEARER 233
           LIELAGTE RFLRRQLVD VG MLQIAEAESLDEGTRHLAIEFV  LAEARER
Sbjct: 256 LIELAGTEPRFLRRQLVDVVGSMLQIAEAESLDEGTRHLAIEFVITLAEARER 308

[Close]

BLAST of Csor.00g109230 vs. ExPASy TrEMBL
Match: A0A6J1DLM2 (importin-5-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021191 PE=4 SV=1)

HSP 1 Score: 400 bits (1029), Expect = 3.97e-129
Identity = 207/233 (88.84%), Postives = 212/233 (90.99%), Query Frame = 0


Query: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGI 60
           MSAVLLRKQLTRDDSYLWPRLNPSSQ SLKSILLSCIQ E+SKSISKKLCDTVSELASGI
Sbjct: 76  MSAVLLRKQLTRDDSYLWPRLNPSSQSSLKSILLSCIQREESKSISKKLCDTVSELASGI 135

Query: 61  LPDNGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLQCLTS 120
           LPDNGWPE LPFMFQCVSSDS KLQESAFLIFAQLSH  GDTLVPHIKHLHGVFLQCLTS
Sbjct: 136 LPDNGWPELLPFMFQCVSSDSPKLQESAFLIFAQLSHYIGDTLVPHIKHLHGVFLQCLTS 195

Query: 121 ASPSTDVKIASFNAVISFVQCLSNSADRDRFQDLLRPMTRTLMESLDNAQEATAQGVLEL 180
            S STDVKIA+ NAVISF+QCLSNS DRDRFQDLL PM RTLME+L+N QE TAQ  LEL
Sbjct: 196 TSSSTDVKIAALNAVISFIQCLSNSGDRDRFQDLLPPMMRTLMEALNNGQETTAQEALEL 255

Query: 181 LIELAGTEARFLRRQLVDTVGLMLQIAEAESLDEGTRHLAIEFVFALAEARER 233
           LIELAGTE RFLRRQLVD VG MLQIAEAESLDEGTRHLAIEFV  LAEARER
Sbjct: 256 LIELAGTEPRFLRRQLVDVVGSMLQIAEAESLDEGTRHLAIEFVITLAEARER 308

[Close]

BLAST of Csor.00g109230 vs. TAIR 10
Match: AT5G19820.1 (ARM repeat superfamily protein )

HSP 1 Score: 339.7 bits (870), Expect = 1.8e-93
Identity = 177/233 (75.97%), Postives = 200/233 (85.84%), Query Frame = 0


Query: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGI 60
           M+AVLLRK LTRDD+YLWPRL+ S+Q SLKS +L CIQ E++KSISKK+CDTVSELASGI
Sbjct: 76  MAAVLLRKLLTRDDAYLWPRLSLSTQSSLKSSMLYCIQHEEAKSISKKICDTVSELASGI 135

Query: 61  LPDNGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLQCLTS 120
           LP+NGWPE LPF+FQCV+S + KLQESAFLI AQLS   G+TL PHIK LHGVFLQCL+S
Sbjct: 136 LPENGWPELLPFVFQCVTSVTPKLQESAFLILAQLSQYVGETLTPHIKELHGVFLQCLSS 195

Query: 121 ASPSTDVKIASFNAVISFVQCLSNSADRDRFQDLLRPMTRTLMESLDNAQEATAQGVLEL 180
            S S+DVKIA+ NAVISFVQCL+NS +RDRFQD+L  M RTL ESL+N  EATAQ  LEL
Sbjct: 196 NSASSDVKIAALNAVISFVQCLANSTERDRFQDVLPAMIRTLTESLNNGNEATAQEALEL 255

Query: 181 LIELAGTEARFLRRQLVDTVGLMLQIAEAESLDEGTRHLAIEFVFALAEARER 234
           LIELAGTE RFLRRQLVD VG MLQIAEA+SL+E TRHLAIEF+  LAEARER
Sbjct: 256 LIELAGTEPRFLRRQLVDIVGSMLQIAEADSLEESTRHLAIEFLVTLAEARER 308

[Close]

BLAST of Csor.00g109230 vs. TAIR 10
Match: AT4G27640.1 (ARM repeat superfamily protein )

HSP 1 Score: 101.3 bits (251), Expect = 1.1e-21
Identity = 65/229 (28.38%), Postives = 121/229 (52.84%), Query Frame = 0


Query: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGI 60
           ++AVLLRK++T      W +L+P  +  +K  L+  I  E+S  + +   + VS +A   
Sbjct: 55  LAAVLLRKRITGH----WAKLSPQLKQHVKQSLIESITVENSPPVRRASANVVSVVAKYA 114

Query: 61  LPDNGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLQCLTS 120
           +P   WP+ L F+FQC  S     +E A ++F+ L+ + G+T  P+   L  + L+C+  
Sbjct: 115 VPAGEWPDLLTFLFQCSQSAQEDHREVALILFSSLTETIGNTFRPYFADLQALLLKCMQD 174

Query: 121 ASPSTDVKIASFNAVISFVQCLSNSADRDRFQDLLRPMTRTLMESLDNAQEATAQGVLEL 180
            S S+ V++A+  AV SF++  ++  +  +F+D +  +     + + + +E  A    E+
Sbjct: 175 ES-SSRVRVAALKAVGSFLEFTNDGDEVVKFRDFIPSILDVSRKCIASGEEDVAILAFEI 234

Query: 181 LIELAGTEARFLRRQLVDTVGLMLQIAEAESLDEGTRHLAIEFVFALAE 230
             EL  + A  L   +   V   L+++  ++L+  TRH AI+ V  LA+
Sbjct: 235 FDELIESPAPLLGDSVKAIVQFSLEVSCNQNLESSTRHQAIQIVSWLAK 278

The following BLAST results are available for this feature:

BLAST of Csor.00g109230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O00410	1.0e-19	31.33	Importin-5 OS=Homo sapiens OX=9606 GN=IPO5 PE=1 SV=4	[more]
Q8BKC5	1.3e-19	30.90	Importin-5 OS=Mus musculus OX=10090 GN=Ipo5 PE=1 SV=3	[more]
Q54EW3	5.3e-13	24.45	Probable importin-5 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0291650...	[more]
O74476	8.8e-08	26.89	Importin subunit beta-3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) O...	[more]

BLAST of Csor.00g109230 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6570316.1	6.28e-163	100.00	Importin-5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038900351.1	3.62e-132	89.70	importin-5 isoform X2 [Benincasa hispida]	[more]
KAE8649420.1	2.93e-130	89.27	hypothetical protein Csa_021659 [Cucumis sativus]	[more]
KAA0040107.1	3.12e-130	89.27	importin-5 [Cucumis melo var. makuwa] >TYK21732.1 importin-5 [Cucumis melo var. ...	[more]
XP_038900350.1	3.89e-130	89.70	importin-5 isoform X1 [Benincasa hispida]	[more]

BLAST of Csor.00g109230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TEZ0	1.51e-130	89.27	Importin-5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G001040 PE...	[more]
A0A0A0L0C1	4.20e-130	89.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G268110 PE=4 SV=1	[more]
A0A1S3BNQ2	4.20e-130	89.27	importin-5 OS=Cucumis melo OX=3656 GN=LOC103491628 PE=4 SV=1	[more]
A0A6J1DJS8	2.49e-129	88.84	importin-5-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021191 PE=4 S...	[more]
A0A6J1DLM2	3.97e-129	88.84	importin-5-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021191 PE=4 S...	[more]

BLAST of Csor.00g109230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19820.1	1.8e-93	75.97	ARM repeat superfamily protein	[more]
AT4G27640.1	1.1e-21	28.38	ARM repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 1..235 e-value: 4.5E-64 score: 218.9
None	No IPR available	PANTHER	PTHR10527:SF73	IMPORTIN-5-LIKE	coord: 1..233
IPR040122	Importin beta family	PANTHER	PTHR10527	IMPORTIN BETA	coord: 1..233
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 1..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g109230.m01	Csor.00g109230.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006606	protein import into nucleus
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0061608	nuclear import signal receptor activity
molecular_function	GO:0008139	nuclear localization sequence binding
molecular_function	GO:0031267	small GTPase binding