Csor.00g108360 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g108360
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionS-acyltransferase
LocationCsor_Chr06: 7665888 .. 7668373 (-)
RNA-Seq ExpressionCsor.00g108360
SyntenyCsor.00g108360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTAGGGATTACGCTCTAAACGTTCCTACAAAATACTTAAATGTTATGTGGAATCCAATACTAAGTTCTAGAACCATAACAATGTAGATCTAGAGCTCATAATATTAACCCAAATAGCATAAATAGGCTTAGCTATCATTTGGTTAATTTCCCCAATTTTAAGCTCATCATCGTCAGCATCTTCAGCTTCCTGTTAAACTTGAGGATGGCTTCAATCTCTTCCCGCTGGCGGGGGCTCTGCAAATCTCGTCGGAACTTCACTTCCAAAACGCATTGAATTCTTCTCTCATTCCTTCAGAGAAATTCTTCGCTATTGCCGATCAAGGGACGGAGTTGTTAAATCTGGCGTCCGATATCTGGAAGCGACTTTTCGCCCCAAGAAGCAGAAGATCTGCTCCGATTGTTCCGATTATCCAATTAAAGAATGGAAGTCATCAATTCCTTCAGGTTCCTTGGCTACTTCATGAATGTTGTCCTACTATGCGGTTCTACTATGCGGTACTGATTCTGCTCATTTTGAATTTTTGGGTTACTGAACTTGAATTCCGATTTCATTTTGAGCGATTAACTTTAAACGAGGCCAATCACCTCAGAATTGAAATTTACGAGCTGTTGAACTTTGTCGTGCATAAGTTAGATATGGAGAGTAGTTGTATTCGCCAGGGTAATAGATTGTTTATTGATGTCCCATTTAACTCCTTAAAGATGGTTAATATGGTTATTTATTGTTTTGTAAGCTTGCCTGAAGAAGATCGATATAGTCTTTCAAGGTCTCCTATCTTGTGATTTCTTTCCAAGAAGTTTACGATGACTGAAAGTTCAAAATCTTTTATCTTACCATGTTAAGTAAAATAAATTTCTTTCAGATTAACCTACTTGCCCCCTGCTCCCCGTAAATTTACACATTCTTGGAGACAACAATGGATACGCTTGTTTTGCTGCCTAGTTTTATCGAAGTTCTTGATGAAGCTAAGAGTCTCTCTAGTTCTCCTGCCAATCTTGTGATCATTTTTTTAGTTCTTGGTAAGAAGCTCAGCTGGTTTGTAGTTTACGTTTCTATAAAATTGAACTTACCCTTTGATTTTCCAATACTTTTATGTGTTTGCACTTTGATCCAGTTCTTAATTTAGCCTTTGCACTCAGTCTTTTTTGGTTCGTAGTTATGCATGCATCTCCCCTGATGAGCAATCCAGCATCAATTGAGGTAATGAACTTGAAGTCTTCACTTGCCTTTTATTTGTCTTTAATGTTCTGCTTTAGATTGGATTATCAATTTCCTTTCCTCATGGATCCTGCTGCTGATTGTTGCCTTAACCTCACTTATTCCTCACATTCACTGTTTTATTAGTCTTTTCCCACAAGTGCAAGATATCCTTTAGTTGGTGGAATTAGAGTAGCTGGATTATTTGCCACAGATAAGATAAAAATCATTCTTATAATACATTCTTTCAAACGTGCAATTTGACCATTGTAGTCTCAAAATTTAAACAAACCATTATAGCAATTCAGTCGTTAATTATTGAGACCTCAATGCCATATTTAGCTCTTAATGTCTATTGCATTTTCGGGTTCACGAGAAGAGAAGAGCAGTTCAATGGAAGTATGACCTAGGCAAGAAAAAAAATTATGAGCAGGTAATACACCTTTGCATATGCCATCTTGTCCTATGAATAGGGAGAAGGAAAAAAAACACTACAATTTTATTCAGGGATAATATTTGAACTCGATGCCTCTGAATGCCTTTATTGCATCTTCTCGTGGAAATTTATCTCCCTATGTGGTATTATGACAGAAGCTAGTCTCATGTCTAGATCGTTCCCAGAGTTTATGCTATATTCTGTTTTTAGTCGTTCTGCACTGAGCTGAGGAGTCATTTCCGAACATGCACCAGTTTTTTCACATATAGCCTTTAATAATCTCATGAAATCTTCTTTTTTTGTTCCTCGTAACTATGCTTAAACATGAAAGGCATTGCGTGTACTGATATTCATGTCTTGGGGGAACCAGAGTTATGTAGTTATTTTGTGAACACTGATGCTTTTCTTTTTGAGTGATAACAATTTGTCAGAAAAAAATAAATAAAAAGCTAGTAAGCAACTGAATAAGAAAGTTGTGTACCGGTGATTGCAAATTCTTCTTGATTTAAAATTCCTATTCAGATTTCCAAGACCTTATTTCCATAAACATTAAAGAAAAAAACAAAAATTTCTCATGATATAGTAGTGACATGTAAATCTTGGTGAAATGATGACAACTAGGGCAGGCAGGTCCCCTTGAAACCAACTTGAACTGGCCTTAGAGCAGGCAAGTCTCCCTAGAATTGGTGGGGGTGGAGCCCCAATATCTCAGCCCCCATTTGCCCAAAAAGACAATGTAATGTAATCTTGTTCATCATCTAATTTCAGGTGGTCGATCATTATCCAAGGATGAGACTAAAGAAGAAGTTCTGTCCATGGAAGTGCAGAAACAGGAGATGGAAATAG

mRNA sequence

ATGATTAGGGATTACGCTCTAAACGTTCCTACAAAATACTTAAATCATCTTCAGCTTCCTGTTAAACTTGAGGATGGCTTCAATCTCTTCCCGCTGGCGGGGGCTCTGCAAATCTCGTCGGAACTTCACTTCCAAAACGCATTGAATTCTTCTCTCATTCCTTCAGAGAAATTCTTCGCTATTGCCGATCAAGGGACGGAGTTGTTAAATCTGGCGTCCGATATCTGGAAGCGACTTTTCGCCCCAAGAAGCAGAAGATCTGCTCCGATTGTTCCGATTATCCAATTAAAGAATGGAAGTCATCAATTCCTTCAGGTTCCTTGGCTACTTCATGAATGTTGTCCTACTATGCGGTTCTACTATGCGATTAACCTACTTGCCCCCTGCTCCCCTTCTTGTCTTTTTTGGTTCGTAGTTATGCATGCATCTCCCCTGATGAGCAATCCAGCATCAATTGAGGTGGTCGATCATTATCCAAGGATGAGACTAAAGAAGAAGTTCTGTCCATGGAAGTGCAGAAACAGGAGATGGAAATAG

Coding sequence (CDS)

ATGATTAGGGATTACGCTCTAAACGTTCCTACAAAATACTTAAATCATCTTCAGCTTCCTGTTAAACTTGAGGATGGCTTCAATCTCTTCCCGCTGGCGGGGGCTCTGCAAATCTCGTCGGAACTTCACTTCCAAAACGCATTGAATTCTTCTCTCATTCCTTCAGAGAAATTCTTCGCTATTGCCGATCAAGGGACGGAGTTGTTAAATCTGGCGTCCGATATCTGGAAGCGACTTTTCGCCCCAAGAAGCAGAAGATCTGCTCCGATTGTTCCGATTATCCAATTAAAGAATGGAAGTCATCAATTCCTTCAGGTTCCTTGGCTACTTCATGAATGTTGTCCTACTATGCGGTTCTACTATGCGATTAACCTACTTGCCCCCTGCTCCCCTTCTTGTCTTTTTTGGTTCGTAGTTATGCATGCATCTCCCCTGATGAGCAATCCAGCATCAATTGAGGTGGTCGATCATTATCCAAGGATGAGACTAAAGAAGAAGTTCTGTCCATGGAAGTGCAGAAACAGGAGATGGAAATAG

Protein sequence

MIRDYALNVPTKYLNHLQLPVKLEDGFNLFPLAGALQISSELHFQNALNSSLIPSEKFFAIADQGTELLNLASDIWKRLFAPRSRRSAPIVPIIQLKNGSHQFLQVPWLLHECCPTMRFYYAINLLAPCSPSCLFWFVVMHASPLMSNPASIEVVDHYPRMRLKKKFCPWKCRNRRWK
Homology
[Close]
BLAST of Csor.00g108360 vs. NCBI nr
Match: KAG6597049.1 (hypothetical protein SDJN03_10229, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 372 bits (956), Expect = 2.29e-130
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0 

Query: 1   MIRDYALNVPTKYLNHLQLPVKLEDGFNLFPLAGALQISSELHFQNALNSSLIPSEKFFA 60
           MIRDYALNVPTKYLNHLQLPVKLEDGFNLFPLAGALQISSELHFQNALNSSLIPSEKFFA
Sbjct: 1   MIRDYALNVPTKYLNHLQLPVKLEDGFNLFPLAGALQISSELHFQNALNSSLIPSEKFFA 60

Query: 61  IADQGTELLNLASDIWKRLFAPRSRRSAPIVPIIQLKNGSHQFLQVPWLLHECCPTMRFY 120
           IADQGTELLNLASDIWKRLFAPRSRRSAPIVPIIQLKNGSHQFLQVPWLLHECCPTMRFY
Sbjct: 61  IADQGTELLNLASDIWKRLFAPRSRRSAPIVPIIQLKNGSHQFLQVPWLLHECCPTMRFY 120

Query: 121 YAINLLAPCSPSCLFWFVVMHASPLMSNPASIEVVDHYPRMRLKKKFCPWKCRNRRWK 178
           YAINLLAPCSPSCLFWFVVMHASPLMSNPASIEVVDHYPRMRLKKKFCPWKCRNRRWK
Sbjct: 121 YAINLLAPCSPSCLFWFVVMHASPLMSNPASIEVVDHYPRMRLKKKFCPWKCRNRRWK 178

[Close]
BLAST of Csor.00g108360 vs. NCBI nr
Match: XP_023540254.1 (probable protein S-acyltransferase 12 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 102 bits (254), Expect = 7.99e-25
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 0 

Query: 134 LFWFVVMHASPLMSNPASIEVVDHYPRMRLKKKFCPWKCRNRRWK 178
           LFWFVVMHASPLMSNPASIEVVDHYPRMRLKKKFCPWKCRNRRWK
Sbjct: 44  LFWFVVMHASPLMSNPASIEVVDHYPRMRLKKKFCPWKCRNRRWK 88

[Close]
BLAST of Csor.00g108360 vs. NCBI nr
Match: XP_022929890.1 (probable protein S-acyltransferase 12 [Cucurbita moschata])

HSP 1 Score: 100 bits (249), Expect = 1.53e-23
Identity = 44/45 (97.78%), Postives = 44/45 (97.78%), Query Frame = 0 

Query: 134 LFWFVVMHASPLMSNPASIEVVDHYPRMRLKKKFCPWKCRNRRWK 178
           LFWFVVMHASPLMSNP SIEVVDHYPRMRLKKKFCPWKCRNRRWK
Sbjct: 87  LFWFVVMHASPLMSNPLSIEVVDHYPRMRLKKKFCPWKCRNRRWK 131

[Close]
BLAST of Csor.00g108360 vs. NCBI nr
Match: XP_023540253.1 (probable protein S-acyltransferase 12 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 84.7 bits (208), Expect = 1.76e-17
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0 

Query: 134 LFWFVVMHASPLMSNPASIEVVDHYPRMRLKKKFCPW 170
           LFWFVVMHASPLMSNPASIEVVDHYPRMRLKKKFCPW
Sbjct: 44  LFWFVVMHASPLMSNPASIEVVDHYPRMRLKKKFCPW 80

[Close]
BLAST of Csor.00g108360 vs. NCBI nr
Match: KAA0048856.1 (rho GTPase-activating protein 5 [Cucumis melo var. makuwa] >TYK20808.1 rho GTPase-activating protein 5 [Cucumis melo var. makuwa])

HSP 1 Score: 76.6 bits (187), Expect = 1.40e-12
Identity = 45/77 (58.44%), Postives = 51/77 (66.23%), Query Frame = 0 

Query: 20  PVKLEDGFNLFPLAGALQISSELHFQNALNSSLIPSEKFFAIADQGTELLNLASDIWKRL 79
           PV   +GFNLFPL   L+IS ELHF     +S   S     I  +    LNLASDIWKRL
Sbjct: 460 PVFQLNGFNLFPLVATLRISPELHF---FYNSFRESSTLSLIKGRN---LNLASDIWKRL 519

Query: 80  FAPRSRRSAPIVPIIQL 96
           FAPRSRRSAPI+PII+L
Sbjct: 520 FAPRSRRSAPILPIIRL 530

[Close]
BLAST of Csor.00g108360 vs. ExPASy TrEMBL
Match: A0A6J1EVJ2 (probable protein S-acyltransferase 12 OS=Cucurbita moschata OX=3662 GN=LOC111436087 PE=4 SV=1)

HSP 1 Score: 100 bits (249), Expect = 7.40e-24
Identity = 44/45 (97.78%), Postives = 44/45 (97.78%), Query Frame = 0 

Query: 134 LFWFVVMHASPLMSNPASIEVVDHYPRMRLKKKFCPWKCRNRRWK 178
           LFWFVVMHASPLMSNP SIEVVDHYPRMRLKKKFCPWKCRNRRWK
Sbjct: 87  LFWFVVMHASPLMSNPLSIEVVDHYPRMRLKKKFCPWKCRNRRWK 131

[Close]
BLAST of Csor.00g108360 vs. ExPASy TrEMBL
Match: A0A5A7U3N8 (S-acyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00690 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 6.76e-13
Identity = 45/77 (58.44%), Postives = 51/77 (66.23%), Query Frame = 0 

Query: 20  PVKLEDGFNLFPLAGALQISSELHFQNALNSSLIPSEKFFAIADQGTELLNLASDIWKRL 79
           PV   +GFNLFPL   L+IS ELHF     +S   S     I  +    LNLASDIWKRL
Sbjct: 460 PVFQLNGFNLFPLVATLRISPELHF---FYNSFRESSTLSLIKGRN---LNLASDIWKRL 519

Query: 80  FAPRSRRSAPIVPIIQL 96
           FAPRSRRSAPI+PII+L
Sbjct: 520 FAPRSRRSAPILPIIRL 530

[Close]
BLAST of Csor.00g108360 vs. ExPASy TrEMBL
Match: A0A1S3AUL3 (S-acyltransferase OS=Cucumis melo OX=3656 GN=LOC103483147 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.12e-06
Identity = 34/67 (50.75%), Postives = 35/67 (52.24%), Query Frame = 0 

Query: 134 LFWFVVMHASPLMSNPASIEVV----------------------DHYPRMRLKKKFCPWK 178
           L  FVVMHAS LMSN  SIEV                       D  PRM+LKKKFCPW 
Sbjct: 227 LLCFVVMHASLLMSNTTSIEVHEKRRAVQWKYDLGKKKNFEQVGDRDPRMKLKKKFCPWN 286

The following BLAST results are available for this feature:
BLAST of Csor.00g108360 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g108360 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6597049.12.29e-130100.00hypothetical protein SDJN03_10229, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023540254.17.99e-25100.00probable protein S-acyltransferase 12 isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_022929890.11.53e-2397.78probable protein S-acyltransferase 12 [Cucurbita moschata][more]
XP_023540253.11.76e-17100.00probable protein S-acyltransferase 12 isoform X1 [Cucurbita pepo subsp. pepo][more]
KAA0048856.11.40e-1258.44rho GTPase-activating protein 5 [Cucumis melo var. makuwa] >TYK20808.1 rho GTPas... [more]
BLAST of Csor.00g108360 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EVJ27.40e-2497.78probable protein S-acyltransferase 12 OS=Cucurbita moschata OX=3662 GN=LOC111436... [more]
A0A5A7U3N86.76e-1358.44S-acyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00... [more]
A0A1S3AUL31.12e-0650.75S-acyltransferase OS=Cucumis melo OX=3656 GN=LOC103483147 PE=3 SV=1[more]
BLAST of Csor.00g108360 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g108360.m01Csor.00g108360.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016746 acyltransferase activity