Csor.00g108330 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g108330
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	heterogeneous nuclear ribonucleoprotein Q-like
Location	Csor_Chr06: 7639976 .. 7643176 (+)
RNA-Seq Expression	Csor.00g108330
Synteny	Csor.00g108330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGATGGTTCGGAAGTTGAGGAGCGGGTGGATCTTGAAGAGGACAATTACATGGAAGAGATGGATGATGATGTGGAAGAACATGTAGATGAGGATGGAGTAGATAGGAGGGATGGTGAACGTCCGGAAGAGGACGTTGAAGAAGTTAGTGAAGAGCATCAAGTTGAGACCAACACAGAAGATAAATTTTCAGAAGATGGTAGAAATAACATATCCATAGAGTCTATAGAAAATAGAGATAAGTCTGCTTCTTTGTTAGATGAAGATGATCTTGAGAAGCATGCTCAGCTTCTTGCCCTTCCTCCTCATGGATCTGAAGTTTTTATTGGTGGACTTTCACGCGATGTTTCGGAAGAAGATTTGAGAGATTTGTGTGAATCACTAGGTGAAATATTTGAGGTCTGGAACGGTGTTTAATCTTTCTCGTGCTCTATCTTTCTTTCTATGGGCCTTCGATTTTAGAGGTAAGTTCTTTTGGTAATACAAATGTTTTGCAGATAAGAATAATAAAAGACAGAGATTCTGGTGAAAGCAAGGGTTATGCATTTATATCATTTAAAACCAAAGAGGCAGCACAAAAGGCTATAGAAGAGTTGCATGGTAAAGAAGTCAAGGTAATTGTCGGGACCCCTTAAGACTTTGATGTACTTATAAGTACTTTACCATGTTTCAGCAGCCAGAGCTGCTCTTTTTCTGATATCCATCACCAAATTTTTTTAATGTAATTCTAGTTTGTCCTTCATACGACAGGGTAAAACGATAAGGTGTTCTCTGTCTGATTCTAAACACAGATTATTTATTGGTAATGTCCCGAAAAGTTGGACAGAGGACGAGTTTAAGAGACTTATAGAAGGAGTTGGCCCTGGAGTTGAAAACATTGAGCTTATTAAGGTGGAGTTGCAAATTTATACATCATCTAGAAATTTATAGTTATTGAGCCCTTATGTTTTTCCTTCTGTATGATCAATTGCAGGATCCTCAGAACCCAAGTCGAAATCGTGGATTTGCATTTGTTTTATATTATAACAATGCCTGTGCTGATTATTCAAGGCAGAAAATGTCGAGCGCGAATTTTAAGCTGGATGGAAATTCCCCAACTGTTAGTTGGGCTGACCCGAAAAGTACACCTGATAACTCTGCTGCTTCTCAGGTAATTGAGTTACCATTTTGGAGAAAATATATGGGGTCTGTATGGCAATTTTCAAGTACCTTGAAATTTCGTATCGACTGGAATTTGGTTAACAAATGTGATAGGTTAAAAGATGAAAGTCGTATATCGTGCTGTTTTGTTTCTTGAATTTCAATAGCTAAATAAGTGATAGCAACCAAAATCTGACCCACAAAATTATATTGATTGACCAACTGAACATTGGGTTAGGTAATGTGAGTAGGAAGATAGTCATCTTGGTAATTTTTAGTAATCTGATTGTCTGGATTTCTCTTTGAGCTAAGTTCAGTTCAAAACCGTCTTAAAGTAGTCTGCGGCATCCCACTGGATCTGGCTGCCACTTACAAACTTCAACAAATTCTAAATGTCCCCATGGCTAATGCTATCATGCCCTGGAGTGATTTTGAAATGGTTAAAATCACTTTCATTGTATTCAAAATCATTTTAAAACATGTTTTTAATGATTCAAAATCAATTTTTATGGTATGAAAATTGTGTTTAAAAGGGTAGAATCAATCATTAAGTGGATTTTGAATAATTAAAAGCATGTTTTCGAGTGTAACATGACAAAAGTGATTTTAACCATTTCAAAACTACTCCCAAATGCGTGTCATGCAATCTTCAGGAAATTTGTCTTCTGGAACACTCTACCTAACAATATGTCATGCATCTCCTTGGTGAACGAGTGAGCATTCAGCCCAATACTTGACCATTAAAGTAGCTTCATGTTTCCAACTGTTTCCATCCCTCAAACCTTTTAACTACTCGTGATCAGCTCTCTTTATGACTGTGTATTAGATGTACTTGAAGGAATTGAATTATAATTTGAAATACAATATAGTTTCCAAATTCACAGGAAGATATTTAAAAAAGCATGGTAGTTTGAATACTACATTGGCGACGATGAAAGCTATAAAGACTTGTTTAGTTTCGACACTGACTGCCTGTTTTCTATGTTCGTGCTAGTAAGTTTTCATAGTTCTATTACATTGCGGTTCGCAGGTGAAGGCTCTTTATGTGAAAAACATACCTGAGAATACTACTACTGAGCAATTGAAAGAACTGTTTCAGCAGCATGGGGATGTGACAAAAGTGAATATGCCACCTGGGAAAGCTGGACATAGTAAACGGGATTTTGCATTCATCCATTACGCTGAGAGGTCAAGTGCACTGAAGGCTGTAAAAGAGACAGAGAAATATGAAATTGAAGGTTTTATTTCTATATCCTCTGAGATTTACATTCGAAATCTGAAATGTACAATCATATCCGCTTTTATTTACAGTGAAACGTTAAAAATATTTCGGGATTGTGTTTGTGTTCCTTGATGATAGGAGTGGATTCAAAAATGATTTGTTCGACTTCGTTTGACCGAAATAATAATCTTCTGAGATCTGCAGTTCAAAATAGTAATAATAATAATCTTCTGAGATTTTGTTATGCAGGCCAAGTGTTGGAGGTTGTCCTTGCAAAGCCTCAAAGTGATAAAAAACCAGATGGGGCCTATTCCCATATATCTGGAAGTCATCCAAACCATCTTCTTCATGCTGGATACGGTAGCTATGGAGGAAGTCCATATGGTTCCTTAGGTGGGTATGGTGTTACTGCAGGCTTGCATCAGGTAATCTGCTCGTTTATCACCCGAAGTGAATGAAATGAAATGAAACAAGACTTTGGCCACATTAATCTCATGGATTTTCTTGCATGAACAGCCAATGATTTATGGTAGGGGGCCAATGCCTGCTGGAATGCAGATGGTACCAATGGTTTTACCGGATGGTCGAATTGGTTATGTCCTGTAAGATCTCACAACTCTTACTCGAATCAAAATCCATTTTTATACGACTATATAAGATAGTAAGTTCTATGTATGATCACTTGGGAATGCAGTCAGCAACCTGGAGTACCGATGCCACCTTCTCGGTCTAGAAGAAGTGAGCGGAGCAGTGGCTCAGGTGGACCAACGAGTCGCTCGGGAGGTAGCAGCAGTGGCGATGAAGTCAACCGTGGGAGAAGGTATCGGCCGTATTAA

mRNA sequence

ATGGCAGATGGTTCGGAAGTTGAGGAGCGGGTGGATCTTGAAGAGGACAATTACATGGAAGAGATGGATGATGATGTGGAAGAACATGTAGATGAGGATGGAGTAGATAGGAGGGATGGTGAACGTCCGGAAGAGGACGTTGAAGAAGTTAGTGAAGAGCATCAAGTTGAGACCAACACAGAAGATAAATTTTCAGAAGATGGTAGAAATAACATATCCATAGAGTCTATAGAAAATAGAGATAAGTCTGCTTCTTTGTTAGATGAAGATGATCTTGAGAAGCATGCTCAGCTTCTTGCCCTTCCTCCTCATGGATCTGAAGTTTTTATTGGTGGACTTTCACGCGATGTTTCGGAAGAAGATTTGAGAGATTTGTGTGAATCACTAGGTGAAATATTTGAGATAAGAATAATAAAAGACAGAGATTCTGGTGAAAGCAAGGGTTATGCATTTATATCATTTAAAACCAAAGAGGCAGCACAAAAGGCTATAGAAGAGTTGCATGGTAAAGAAGTCAAGGGTAAAACGATAAGGTGTTCTCTGTCTGATTCTAAACACAGATTATTTATTGGTAATGTCCCGAAAAGTTGGACAGAGGACGAGTTTAAGAGACTTATAGAAGGAGTTGGCCCTGGAGTTGAAAACATTGAGCTTATTAAGGATCCTCAGAACCCAAGTCGAAATCGTGGATTTGCATTTGTTTTATATTATAACAATGCCTGTGCTGATTATTCAAGGCAGAAAATGTCGAGCGCGAATTTTAAGCTGGATGGAAATTCCCCAACTGTTAGTTGGGCTGACCCGAAAAGTACACCTGATAACTCTGCTGCTTCTCAGGTGAAGGCTCTTTATGTGAAAAACATACCTGAGAATACTACTACTGAGCAATTGAAAGAACTGTTTCAGCAGCATGGGGATGTGACAAAAGTGAATATGCCACCTGGGAAAGCTGGACATAGTAAACGGGATTTTGCATTCATCCATTACGCTGAGAGGTCAAGTGCACTGAAGGCTGTAAAAGAGACAGAGAAATATGAAATTGAAGGCCAAGTGTTGGAGGTTGTCCTTGCAAAGCCTCAAAGTGATAAAAAACCAGATGGGGCCTATTCCCATATATCTGGAAGTCATCCAAACCATCTTCTTCATGCTGGATACGGTAGCTATGGAGGAAGTCCATATGGTTCCTTAGGTGGGTATGGTGTTACTGCAGGCTTGCATCAGCCAATGATTTATGGTAGGGGGCCAATGCCTGCTGGAATGCAGATGGTACCAATGGTTTTACCGGATGGTCGAATTGGTTATGTCCTTCAGCAACCTGGAGTACCGATGCCACCTTCTCGGTCTAGAAGAAGTGAGCGGAGCAGTGGCTCAGGTGGACCAACGAGTCGCTCGGGAGGTAGCAGCAGTGGCGATGAAGTCAACCGTGGGAGAAGGTATCGGCCGTATTAA

Coding sequence (CDS)

ATGGCAGATGGTTCGGAAGTTGAGGAGCGGGTGGATCTTGAAGAGGACAATTACATGGAAGAGATGGATGATGATGTGGAAGAACATGTAGATGAGGATGGAGTAGATAGGAGGGATGGTGAACGTCCGGAAGAGGACGTTGAAGAAGTTAGTGAAGAGCATCAAGTTGAGACCAACACAGAAGATAAATTTTCAGAAGATGGTAGAAATAACATATCCATAGAGTCTATAGAAAATAGAGATAAGTCTGCTTCTTTGTTAGATGAAGATGATCTTGAGAAGCATGCTCAGCTTCTTGCCCTTCCTCCTCATGGATCTGAAGTTTTTATTGGTGGACTTTCACGCGATGTTTCGGAAGAAGATTTGAGAGATTTGTGTGAATCACTAGGTGAAATATTTGAGATAAGAATAATAAAAGACAGAGATTCTGGTGAAAGCAAGGGTTATGCATTTATATCATTTAAAACCAAAGAGGCAGCACAAAAGGCTATAGAAGAGTTGCATGGTAAAGAAGTCAAGGGTAAAACGATAAGGTGTTCTCTGTCTGATTCTAAACACAGATTATTTATTGGTAATGTCCCGAAAAGTTGGACAGAGGACGAGTTTAAGAGACTTATAGAAGGAGTTGGCCCTGGAGTTGAAAACATTGAGCTTATTAAGGATCCTCAGAACCCAAGTCGAAATCGTGGATTTGCATTTGTTTTATATTATAACAATGCCTGTGCTGATTATTCAAGGCAGAAAATGTCGAGCGCGAATTTTAAGCTGGATGGAAATTCCCCAACTGTTAGTTGGGCTGACCCGAAAAGTACACCTGATAACTCTGCTGCTTCTCAGGTGAAGGCTCTTTATGTGAAAAACATACCTGAGAATACTACTACTGAGCAATTGAAAGAACTGTTTCAGCAGCATGGGGATGTGACAAAAGTGAATATGCCACCTGGGAAAGCTGGACATAGTAAACGGGATTTTGCATTCATCCATTACGCTGAGAGGTCAAGTGCACTGAAGGCTGTAAAAGAGACAGAGAAATATGAAATTGAAGGCCAAGTGTTGGAGGTTGTCCTTGCAAAGCCTCAAAGTGATAAAAAACCAGATGGGGCCTATTCCCATATATCTGGAAGTCATCCAAACCATCTTCTTCATGCTGGATACGGTAGCTATGGAGGAAGTCCATATGGTTCCTTAGGTGGGTATGGTGTTACTGCAGGCTTGCATCAGCCAATGATTTATGGTAGGGGGCCAATGCCTGCTGGAATGCAGATGGTACCAATGGTTTTACCGGATGGTCGAATTGGTTATGTCCTTCAGCAACCTGGAGTACCGATGCCACCTTCTCGGTCTAGAAGAAGTGAGCGGAGCAGTGGCTCAGGTGGACCAACGAGTCGCTCGGGAGGTAGCAGCAGTGGCGATGAAGTCAACCGTGGGAGAAGGTATCGGCCGTATTAA

Protein sequence

MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNTEDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVKGKTIRCSLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKELFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQSDKKPDGAYSHISGSHPNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYRPY

Homology

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BLAST of Csor.00g108330 vs. ExPASy Swiss-Prot
Match: Q9ASP6 (Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana OX=3702 GN=LIF2 PE=1 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 4.4e-163
Identity = 307/499 (61.52%), Postives = 393/499 (78.76%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDV-EEVSEEHQVE-- 60
           M+D  + ++RVD EE +Y  EM+D+VEE   E+  +  + +  ++DV  + +EE +VE  
Sbjct: 1   MSDARDNDDRVDFEEGSY-SEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDY 60

Query: 61  --------TNTEDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVF 120
                    + +++ +ED  N+I IE+ ++ +K  S +D++D EK++ LL+LPPHGSEVF
Sbjct: 61  GDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVF 120

Query: 121 IGGLSRDVSEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHG 180
           IGGL RDV EEDLRDLCE +GEIFE+R++KDRDSG+SKGYAF++FKTK+ AQKAIEELH 
Sbjct: 121 IGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHS 180

Query: 181 KEVKGKTIRCSLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNR 240
           KE KGKTIRCSLS++K+RLFIGN+PK+WTEDEF+++IE VGPGVENIELIKDP N +RNR
Sbjct: 181 KEFKGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNR 240

Query: 241 GFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNS-AASQVKALYVKNI 300
           GFAFVLYYNNACADYSRQKM  +NFKL+GN+PTV+WADPKS+P++S AA+QVKALYVKNI
Sbjct: 241 GFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNI 300

Query: 301 PENTTTEQLKELFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIE 360
           PENT+TEQLKELFQ+HG+VTK+  PPGK G  KRDF F+HYAERSSALKAVK+TE+YE+ 
Sbjct: 301 PENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVN 360

Query: 361 GQVLEVVLAKPQSDKKPD-GAYSHISGSHPNHLLHAGYGSYGGSPYGSLG-GYGVTAGLH 420
           GQ LEVVLAKPQ+++K D  +YS+ +   P   +H  +G +  +PYG++G G G+     
Sbjct: 361 GQPLEVVLAKPQAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFS 420

Query: 421 QPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPM---PPSRSRRSERSSGSGGPTSR 480
           QPMIYGRG MP GMQMVPM+LPDGR+GYVLQQPG+PM   PP R RR++R++GS G + R
Sbjct: 421 QPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSGR 480

Query: 481 SGGSSSGDEVNRGRRYRPY 483
              S   D    GRRYRPY
Sbjct: 481 D-NSHEHDGNRGGRRYRPY 495

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BLAST of Csor.00g108330 vs. ExPASy Swiss-Prot
Match: O60506 (Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=1 SV=2)

HSP 1 Score: 182.6 bits (462), Expect = 1.1e-44
Identity = 108/321 (33.64%), Postives = 180/321 (56.07%), Query Frame = 0


Query: 102 PPHGSEVFIGGLSRDVSEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQ 161
           P  G+E+F+G + RD+ E++L  L E  G I+++R++ D  +G ++GYAF++F TKEAAQ
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217

Query: 162 KAIEELHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIK 221
           +A++  +  E++ GK I   +S + +RLF+G++PKS T+++       V  G+ ++ L  
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277

Query: 222 DPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQV 281
            P +  +NRGF F+ Y ++  A  +R+++ S   K+ GN  TV WADP   PD    ++V
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337

Query: 282 KALYVKNIPENTTTEQLKELFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVK 341
           K L+V+N+    T E L++ F Q G + +V           +D+AFIH+ ER  A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKAFSQFGKLERVK--------KLKDYAFIHFDERDGAVKAME 397

Query: 342 ETEKYEIEGQVLEVVLAKPQSDKKPDGAYSHISGSHPNHLLHAGYGSYG---------GS 401
           E    ++EG+ +E+V AKP   K+ +      +  +    ++  Y  YG         G 
Sbjct: 398 EMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQ---MYDDYYYYGPPHMPPPTRGR 457

Query: 402 PYGSLGGYGVTAGLHQPMIYG 413
             G  GGYG     + P  YG
Sbjct: 458 GRGGRGGYG-----YPPDYYG 462

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BLAST of Csor.00g108330 vs. ExPASy Swiss-Prot
Match: Q7TMK9 (Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=2)

HSP 1 Score: 182.2 bits (461), Expect = 1.4e-44
Identity = 108/321 (33.64%), Postives = 180/321 (56.07%), Query Frame = 0


Query: 102 PPHGSEVFIGGLSRDVSEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQ 161
           P  G+E+F+G + RD+ E++L  L E  G I+++R++ D  +G ++GYAF++F TKEAAQ
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217

Query: 162 KAIEELHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIK 221
           +A++  +  E++ GK I   +S + +RLF+G++PKS T+++       V  G+ ++ L  
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277

Query: 222 DPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQV 281
            P +  +NRGF F+ Y ++  A  +R+++ S   K+ GN  TV WADP   PD    ++V
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337

Query: 282 KALYVKNIPENTTTEQLKELFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVK 341
           K L+V+N+    T E L++ F Q G + +V           +D+AFIH+ ER  A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKSFSQFGKLERVK--------KLKDYAFIHFDERDGAVKAME 397

Query: 342 ETEKYEIEGQVLEVVLAKPQSDKKPDGAYSHISGSHPNHLLHAGYGSYG---------GS 401
           E    ++EG+ +E+V AKP   K+ +      +  +    ++  Y  YG         G 
Sbjct: 398 EMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQ---MYDDYYYYGPPHMPPPTRGR 457

Query: 402 PYGSLGGYGVTAGLHQPMIYG 413
             G  GGYG     + P  YG
Sbjct: 458 GRGGRGGYG-----YPPDYYG 462

[Close]

BLAST of Csor.00g108330 vs. ExPASy Swiss-Prot
Match: Q7TP47 (Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.4e-44
Identity = 108/321 (33.64%), Postives = 180/321 (56.07%), Query Frame = 0


Query: 102 PPHGSEVFIGGLSRDVSEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQ 161
           P  G+E+F+G + RD+ E++L  L E  G I+++R++ D  +G ++GYAF++F TKEAAQ
Sbjct: 68  PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 127

Query: 162 KAIEELHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIK 221
           +A++  +  E++ GK I   +S + +RLF+G++PKS T+++       V  G+ ++ L  
Sbjct: 128 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 187

Query: 222 DPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQV 281
            P +  +NRGF F+ Y ++  A  +R+++ S   K+ GN  TV WADP   PD    ++V
Sbjct: 188 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 247

Query: 282 KALYVKNIPENTTTEQLKELFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVK 341
           K L+V+N+    T E L++ F Q G + +V           +D+AFIH+ ER  A+KA++
Sbjct: 248 KVLFVRNLANTVTEEILEKSFSQFGKLERVK--------KLKDYAFIHFDERDGAVKAME 307

Query: 342 ETEKYEIEGQVLEVVLAKPQSDKKPDGAYSHISGSHPNHLLHAGYGSYG---------GS 401
           E    ++EG+ +E+V AKP   K+ +      +  +    ++  Y  YG         G 
Sbjct: 308 EMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQ---MYDDYYYYGPPHMPPPTRGR 367

Query: 402 PYGSLGGYGVTAGLHQPMIYG 413
             G  GGYG     + P  YG
Sbjct: 368 GRGGRGGYG-----YPPDYYG 372

[Close]

BLAST of Csor.00g108330 vs. ExPASy Swiss-Prot
Match: O43390 (Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.4e-44
Identity = 136/423 (32.15%), Postives = 210/423 (49.65%), Query Frame = 0


Query: 102 PPHGSEVFIGGLSRDVSEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQ 161
           P  G+EVF+G + RD+ E++L  L E  G I+++R++ D  SG+++GYAFI+F  KEAAQ
Sbjct: 161 PGIGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQ 220

Query: 162 KAIEELHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIK 221
           +A++     E++ GK +   +S + +RLF+G++PK+ T++        V  G+ ++ L  
Sbjct: 221 EAVKLCDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYH 280

Query: 222 DPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQV 281
            P +  +NRGF F+ Y ++  A  +R+++ S   K+ GN  TV WADP   PD    ++V
Sbjct: 281 QPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKV 340

Query: 282 KALYVKNIPENTTTEQLKELFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVK 341
           K L+V+N+    T E L++ F + G + +V           +D+AF+H+ +R +A+KA+ 
Sbjct: 341 KVLFVRNLATTVTEEILEKSFSEFGKLERVK--------KLKDYAFVHFEDRGAAVKAMD 400

Query: 342 ETEKYEIEGQVLEVVLAKPQSDKKPD---GAYSHISGSHPNHLLH--------------- 401
           E    EIEG+ +E+VLAKP   K+ +      +  S ++ ++  H               
Sbjct: 401 EMNGKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAYEDYYYHPPPRMPPPIRGRGRG 460

Query: 402 AGYGSYGGSP--------YGSLGGY---GVTAGLHQP--------MIYGRG--------- 461
            G G YG  P        Y    GY       G   P         + GRG         
Sbjct: 461 GGRGGYGYPPDYYGYEDYYDDYYGYDYHDYRGGYEDPYYGYDDGYAVRGRGGGRGGRGAP 520

Query: 462 PMPAGMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRS-GGSSSGDEV 477
           P P G    P   P GR GY   Q G P+ P R  R     G GGP  +  G  S G   
Sbjct: 521 PPPRGRGAPP---PRGRAGY--SQRGAPLGPPRGSR----GGRGGPAQQQRGRGSRGSRG 566

[Close]

BLAST of Csor.00g108330 vs. NCBI nr
Match: KAG6597046.1 (Heterogeneous nuclear ribonucleoprotein Q, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 935 bits (2416), Expect = 0.0
Identity = 482/482 (100.00%), Postives = 482/482 (100.00%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 60
           MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT
Sbjct: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 60

Query: 61  EDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120
           EDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE
Sbjct: 61  EDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVKGKTIRCS 180
           DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVKGKTIRCS
Sbjct: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360
           FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ
Sbjct: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360

Query: 361 SDKKPDGAYSHISGSHPNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420
           SDKKPDGAYSHISGSHPNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM
Sbjct: 361 SDKKPDGAYSHISGSHPNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480

Query: 481 PY 482
           PY
Sbjct: 481 PY 482

[Close]

BLAST of Csor.00g108330 vs. NCBI nr
Match: XP_022938168.1 (heterogeneous nuclear ribonucleoprotein Q-like isoform X2 [Cucurbita moschata] >XP_022938176.1 heterogeneous nuclear ribonucleoprotein Q-like isoform X2 [Cucurbita moschata] >XP_022938184.1 heterogeneous nuclear ribonucleoprotein Q-like isoform X2 [Cucurbita moschata] >XP_022938192.1 heterogeneous nuclear ribonucleoprotein Q-like isoform X2 [Cucurbita moschata] >XP_022938201.1 heterogeneous nuclear ribonucleoprotein Q-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 932 bits (2408), Expect = 0.0
Identity = 480/482 (99.59%), Postives = 480/482 (99.59%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 60
           MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQ ETNT
Sbjct: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQAETNT 60

Query: 61  EDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120
           EDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE
Sbjct: 61  EDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVKGKTIRCS 180
           DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVKGKTIRCS
Sbjct: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMSS NFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSTNFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360
           FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ
Sbjct: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360

Query: 361 SDKKPDGAYSHISGSHPNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420
           SDKKPDGAYSHISGSHPNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM
Sbjct: 361 SDKKPDGAYSHISGSHPNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480

Query: 481 PY 482
           PY
Sbjct: 481 PY 482

[Close]

BLAST of Csor.00g108330 vs. NCBI nr
Match: XP_022938159.1 (heterogeneous nuclear ribonucleoprotein Q-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 932 bits (2408), Expect = 0.0
Identity = 480/482 (99.59%), Postives = 480/482 (99.59%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 60
           MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQ ETNT
Sbjct: 3   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQAETNT 62

Query: 61  EDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120
           EDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE
Sbjct: 63  EDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 122

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVKGKTIRCS 180
           DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVKGKTIRCS
Sbjct: 123 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVKGKTIRCS 182

Query: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA
Sbjct: 183 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 242

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMSS NFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL
Sbjct: 243 CADYSRQKMSSTNFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 302

Query: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360
           FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ
Sbjct: 303 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 362

Query: 361 SDKKPDGAYSHISGSHPNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420
           SDKKPDGAYSHISGSHPNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM
Sbjct: 363 SDKKPDGAYSHISGSHPNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 422

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR
Sbjct: 423 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 482

Query: 481 PY 482
           PY
Sbjct: 483 PY 484

[Close]

BLAST of Csor.00g108330 vs. NCBI nr
Match: XP_023540270.1 (heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo] >XP_023540271.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo] >XP_023540272.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo] >XP_023540273.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo] >XP_023540274.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 928 bits (2399), Expect = 0.0
Identity = 479/482 (99.38%), Postives = 480/482 (99.59%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 60
           MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT
Sbjct: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 60

Query: 61  EDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120
           EDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE
Sbjct: 61  EDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVKGKTIRCS 180
           DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVKGKTIRCS
Sbjct: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQN  RNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNQIRNRGFAFVLYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360
           FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ
Sbjct: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360

Query: 361 SDKKPDGAYSHISGSHPNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420
           SDKKPDGAYSHISGSHPNHLLHAGYGSYGG+PYGSLGGYGVTAGLHQPMIYGRGPMPAGM
Sbjct: 361 SDKKPDGAYSHISGSHPNHLLHAGYGSYGGNPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480

Query: 481 PY 482
           PY
Sbjct: 481 PY 482

[Close]

BLAST of Csor.00g108330 vs. NCBI nr
Match: XP_022974824.1 (heterogeneous nuclear ribonucleoprotein Q-like isoform X2 [Cucurbita maxima] >XP_022974825.1 heterogeneous nuclear ribonucleoprotein Q-like isoform X2 [Cucurbita maxima] >XP_022974826.1 heterogeneous nuclear ribonucleoprotein Q-like isoform X2 [Cucurbita maxima] >XP_022974827.1 heterogeneous nuclear ribonucleoprotein Q-like isoform X2 [Cucurbita maxima] >XP_022974828.1 heterogeneous nuclear ribonucleoprotein Q-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 927 bits (2396), Expect = 0.0
Identity = 478/482 (99.17%), Postives = 479/482 (99.38%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 60
           MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT
Sbjct: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 60

Query: 61  EDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120
           ED FSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE
Sbjct: 61  EDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVKGKTIRCS 180
           DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKE+AQKAIEELHGKEVKGKTIRCS
Sbjct: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPG ENIELIKDPQNPSRNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360
           FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ
Sbjct: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360

Query: 361 SDKKPDGAYSHISGSHPNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420
           SDKKPDGAYSHISGSH NHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM
Sbjct: 361 SDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480

Query: 481 PY 482
           PY
Sbjct: 481 PY 482

[Close]

BLAST of Csor.00g108330 vs. ExPASy TrEMBL
Match: A0A6J1FDC4 (heterogeneous nuclear ribonucleoprotein Q-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444327 PE=4 SV=1)

HSP 1 Score: 932 bits (2408), Expect = 0.0
Identity = 480/482 (99.59%), Postives = 480/482 (99.59%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 60
           MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQ ETNT
Sbjct: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQAETNT 60

Query: 61  EDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120
           EDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE
Sbjct: 61  EDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVKGKTIRCS 180
           DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVKGKTIRCS
Sbjct: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMSS NFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSTNFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360
           FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ
Sbjct: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360

Query: 361 SDKKPDGAYSHISGSHPNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420
           SDKKPDGAYSHISGSHPNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM
Sbjct: 361 SDKKPDGAYSHISGSHPNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480

Query: 481 PY 482
           PY
Sbjct: 481 PY 482

[Close]

BLAST of Csor.00g108330 vs. ExPASy TrEMBL
Match: A0A6J1FD95 (heterogeneous nuclear ribonucleoprotein Q-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444327 PE=4 SV=1)

HSP 1 Score: 932 bits (2408), Expect = 0.0
Identity = 480/482 (99.59%), Postives = 480/482 (99.59%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 60
           MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQ ETNT
Sbjct: 3   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQAETNT 62

Query: 61  EDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120
           EDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE
Sbjct: 63  EDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 122

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVKGKTIRCS 180
           DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVKGKTIRCS
Sbjct: 123 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVKGKTIRCS 182

Query: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA
Sbjct: 183 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 242

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMSS NFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL
Sbjct: 243 CADYSRQKMSSTNFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 302

Query: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360
           FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ
Sbjct: 303 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 362

Query: 361 SDKKPDGAYSHISGSHPNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420
           SDKKPDGAYSHISGSHPNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM
Sbjct: 363 SDKKPDGAYSHISGSHPNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 422

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR
Sbjct: 423 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 482

Query: 481 PY 482
           PY
Sbjct: 483 PY 484

[Close]

BLAST of Csor.00g108330 vs. ExPASy TrEMBL
Match: A0A6J1IBB5 (heterogeneous nuclear ribonucleoprotein Q-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111473603 PE=4 SV=1)

HSP 1 Score: 927 bits (2396), Expect = 0.0
Identity = 478/482 (99.17%), Postives = 479/482 (99.38%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 60
           MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT
Sbjct: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 60

Query: 61  EDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120
           ED FSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE
Sbjct: 61  EDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVKGKTIRCS 180
           DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKE+AQKAIEELHGKEVKGKTIRCS
Sbjct: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPG ENIELIKDPQNPSRNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360
           FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ
Sbjct: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360

Query: 361 SDKKPDGAYSHISGSHPNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420
           SDKKPDGAYSHISGSH NHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM
Sbjct: 361 SDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480

Query: 481 PY 482
           PY
Sbjct: 481 PY 482

[Close]

BLAST of Csor.00g108330 vs. ExPASy TrEMBL
Match: A0A6J1IHG4 (heterogeneous nuclear ribonucleoprotein Q-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111473603 PE=4 SV=1)

HSP 1 Score: 927 bits (2396), Expect = 0.0
Identity = 478/482 (99.17%), Postives = 479/482 (99.38%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 60
           MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT
Sbjct: 3   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 62

Query: 61  EDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120
           ED FSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE
Sbjct: 63  EDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 122

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVKGKTIRCS 180
           DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKE+AQKAIEELHGKEVKGKTIRCS
Sbjct: 123 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRCS 182

Query: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPG ENIELIKDPQNPSRNRGFAFVLYYNNA
Sbjct: 183 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNNA 242

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL
Sbjct: 243 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 302

Query: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360
           FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ
Sbjct: 303 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 362

Query: 361 SDKKPDGAYSHISGSHPNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420
           SDKKPDGAYSHISGSH NHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM
Sbjct: 363 SDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 422

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR
Sbjct: 423 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 482

Query: 481 PY 482
           PY
Sbjct: 483 PY 484

[Close]

BLAST of Csor.00g108330 vs. ExPASy TrEMBL
Match: A0A1S3AUX7 (heterogeneous nuclear ribonucleoprotein R isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483143 PE=4 SV=1)

HSP 1 Score: 865 bits (2236), Expect = 1.54e-315
Identity = 443/482 (91.91%), Postives = 465/482 (96.47%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 60
           MAD SEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRR GE PEEDVEEVSEE QV T+T
Sbjct: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120
           EDKFS DGRNN+S+ESIENR+KSASLLDED+LEKHAQLLALPPHGSEVFIGGLSRDV EE
Sbjct: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVKGKTIRCS 180
           DLR++CESLGEIFEIRIIKD+DSGESKGYAFI+FKTKEAAQKAIE+LHGKEVKGKTIRCS
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWT+DEF+RLIEGVGPGVENIELIKDPQNP+RNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMSSANFKLDGNSPTVSWADPKS PDN+AA+QVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360
           FQQHG+VTKVNMPPGKAG SKRDFAFIHYAERSSALKAVKETEKYEIEGQ+LEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360

Query: 361 SDKKPDGAYSHISGSHPNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420
           SDKK DGAYSHISGS+PNHLLH GYG YGG+PYGS+GGYGVTAG HQPMIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSIGGYGVTAGFHQPMIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERS+GSGG   RSGGSSS D+VNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYR 480

Query: 481 PY 482
           PY
Sbjct: 481 PY 482

[Close]

BLAST of Csor.00g108330 vs. TAIR 10
Match: AT4G00830.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 575.9 bits (1483), Expect = 3.1e-164
Identity = 307/499 (61.52%), Postives = 393/499 (78.76%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDV-EEVSEEHQVE-- 60
           M+D  + ++RVD EE +Y  EM+D+VEE   E+  +  + +  ++DV  + +EE +VE  
Sbjct: 1   MSDARDNDDRVDFEEGSY-SEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDY 60

Query: 61  --------TNTEDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVF 120
                    + +++ +ED  N+I IE+ ++ +K  S +D++D EK++ LL+LPPHGSEVF
Sbjct: 61  GDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVF 120

Query: 121 IGGLSRDVSEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHG 180
           IGGL RDV EEDLRDLCE +GEIFE+R++KDRDSG+SKGYAF++FKTK+ AQKAIEELH 
Sbjct: 121 IGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHS 180

Query: 181 KEVKGKTIRCSLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNR 240
           KE KGKTIRCSLS++K+RLFIGN+PK+WTEDEF+++IE VGPGVENIELIKDP N +RNR
Sbjct: 181 KEFKGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNR 240

Query: 241 GFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNS-AASQVKALYVKNI 300
           GFAFVLYYNNACADYSRQKM  +NFKL+GN+PTV+WADPKS+P++S AA+QVKALYVKNI
Sbjct: 241 GFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNI 300

Query: 301 PENTTTEQLKELFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIE 360
           PENT+TEQLKELFQ+HG+VTK+  PPGK G  KRDF F+HYAERSSALKAVK+TE+YE+ 
Sbjct: 301 PENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVN 360

Query: 361 GQVLEVVLAKPQSDKKPD-GAYSHISGSHPNHLLHAGYGSYGGSPYGSLG-GYGVTAGLH 420
           GQ LEVVLAKPQ+++K D  +YS+ +   P   +H  +G +  +PYG++G G G+     
Sbjct: 361 GQPLEVVLAKPQAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFS 420

Query: 421 QPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPM---PPSRSRRSERSSGSGGPTSR 480
           QPMIYGRG MP GMQMVPM+LPDGR+GYVLQQPG+PM   PP R RR++R++GS G + R
Sbjct: 421 QPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSGR 480

Query: 481 SGGSSSGDEVNRGRRYRPY 483
              S   D    GRRYRPY
Sbjct: 481 D-NSHEHDGNRGGRRYRPY 495

[Close]

BLAST of Csor.00g108330 vs. TAIR 10
Match: AT4G00830.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 575.9 bits (1483), Expect = 3.1e-164
Identity = 307/499 (61.52%), Postives = 393/499 (78.76%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDV-EEVSEEHQVE-- 60
           M+D  + ++RVD EE +Y  EM+D+VEE   E+  +  + +  ++DV  + +EE +VE  
Sbjct: 1   MSDARDNDDRVDFEEGSY-SEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDY 60

Query: 61  --------TNTEDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVF 120
                    + +++ +ED  N+I IE+ ++ +K  S +D++D EK++ LL+LPPHGSEVF
Sbjct: 61  GDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVF 120

Query: 121 IGGLSRDVSEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHG 180
           IGGL RDV EEDLRDLCE +GEIFE+R++KDRDSG+SKGYAF++FKTK+ AQKAIEELH 
Sbjct: 121 IGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHS 180

Query: 181 KEVKGKTIRCSLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNR 240
           KE KGKTIRCSLS++K+RLFIGN+PK+WTEDEF+++IE VGPGVENIELIKDP N +RNR
Sbjct: 181 KEFKGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNR 240

Query: 241 GFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNS-AASQVKALYVKNI 300
           GFAFVLYYNNACADYSRQKM  +NFKL+GN+PTV+WADPKS+P++S AA+QVKALYVKNI
Sbjct: 241 GFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNI 300

Query: 301 PENTTTEQLKELFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIE 360
           PENT+TEQLKELFQ+HG+VTK+  PPGK G  KRDF F+HYAERSSALKAVK+TE+YE+ 
Sbjct: 301 PENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVN 360

Query: 361 GQVLEVVLAKPQSDKKPD-GAYSHISGSHPNHLLHAGYGSYGGSPYGSLG-GYGVTAGLH 420
           GQ LEVVLAKPQ+++K D  +YS+ +   P   +H  +G +  +PYG++G G G+     
Sbjct: 361 GQPLEVVLAKPQAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFS 420

Query: 421 QPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPM---PPSRSRRSERSSGSGGPTSR 480
           QPMIYGRG MP GMQMVPM+LPDGR+GYVLQQPG+PM   PP R RR++R++GS G + R
Sbjct: 421 QPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSGR 480

Query: 481 SGGSSSGDEVNRGRRYRPY 483
              S   D    GRRYRPY
Sbjct: 481 D-NSHEHDGNRGGRRYRPY 495

[Close]

BLAST of Csor.00g108330 vs. TAIR 10
Match: AT4G00830.4 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 555.8 bits (1431), Expect = 3.3e-158
Identity = 303/500 (60.60%), Postives = 387/500 (77.40%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDV-EEVSEEHQVE-- 60
           M+D  + ++RVD EE +Y  EM+D+VEE   E+  +  + +  ++DV  + +EE +VE  
Sbjct: 1   MSDARDNDDRVDFEEGSY-SEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDY 60

Query: 61  --------TNTEDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVF 120
                    + +++ +ED  N+I IE+ ++ +K  S +D++D EK++ LL+LPPHGSEVF
Sbjct: 61  GDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVF 120

Query: 121 IGGLSRDVSEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHG 180
           IGGL RDV EEDLRDLCE +GEIFE+R++KDRDSG+SKGYAF++FKTK+ AQKAIEELH 
Sbjct: 121 IGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHS 180

Query: 181 KEVK-GKTIRCSLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRN 240
           KE K   T  CSLS S +RLFIGN+PK+WTEDEF+++IE VGPGVENIELIKDP N +RN
Sbjct: 181 KEFKASSTANCSLSLS-NRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRN 240

Query: 241 RGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNS-AASQVKALYVKN 300
           RGFAFVLYYNNACADYSRQKM  +NFKL+GN+PTV+WADPKS+P++S AA+QVKALYVKN
Sbjct: 241 RGFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKN 300

Query: 301 IPENTTTEQLKELFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEI 360
           IPENT+TEQLKELFQ+HG+VTK+  PPGK G  KRDF F+HYAERSSALKAVK+TE+YE+
Sbjct: 301 IPENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEV 360

Query: 361 EGQVLEVVLAKPQSDKKPD-GAYSHISGSHPNHLLHAGYGSYGGSPYGSLG-GYGVTAGL 420
            GQ LEVVLAKPQ+++K D  +YS+ +   P   +H  +G +  +PYG++G G G+    
Sbjct: 361 NGQPLEVVLAKPQAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSF 420

Query: 421 HQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPM---PPSRSRRSERSSGSGGPTS 480
            QPMIYGRG MP GMQMVPM+LPDGR+GYVLQQPG+PM   PP R RR++R++GS G + 
Sbjct: 421 SQPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSG 480

Query: 481 RSGGSSSGDEVNRGRRYRPY 483
           R   S   D    GRRYRPY
Sbjct: 481 RD-NSHEHDGNRGGRRYRPY 495

[Close]

BLAST of Csor.00g108330 vs. TAIR 10
Match: AT4G00830.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 544.7 bits (1402), Expect = 7.7e-155
Identity = 291/478 (60.88%), Postives = 373/478 (78.03%), Query Frame = 0


Query: 12  DLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVE-TNTEDKFSEDGRN 71
           D  E+  +EE +++ EE  D+D V  ++ E  E +VE+  +    +  + +++ +ED  N
Sbjct: 3   DEVEEEQVEEYEEEEEEDDDDDDVGNQNAE--EREVEDYGDTKGGDMEDVQEEIAEDDDN 62

Query: 72  NISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEEDLRDLCESLG 131
           +I IE+ ++ +K  S +D++D EK++ LL+LPPHGSEVFIGGL RDV EEDLRDLCE +G
Sbjct: 63  HIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIGGLPRDVGEEDLRDLCEEIG 122

Query: 132 EIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVKGKTIRCSLSDSKHRLFI 191
           EIFE+R++KDRDSG+SKGYAF++FKTK+ AQKAIEELH KE KGKTIRCSLS++K+RLFI
Sbjct: 123 EIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFKGKTIRCSLSETKNRLFI 182

Query: 192 GNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNACADYSRQKMS 251
           GN+PK+WTEDEF+++IE VGPG        DP N +RNRGFAFVLYYNNACADYSRQKM 
Sbjct: 183 GNIPKNWTEDEFRKVIEDVGPG--------DPTNTTRNRGFAFVLYYNNACADYSRQKMI 242

Query: 252 SANFKLDGNSPTVSWADPKSTPDNS-AASQVKALYVKNIPENTTTEQLKELFQQHGDVTK 311
            +NFKL+GN+PTV+WADPKS+P++S AA+QVKALYVKNIPENT+TEQLKELFQ+HG+VTK
Sbjct: 243 DSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPENTSTEQLKELFQRHGEVTK 302

Query: 312 VNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQSDKKPD-GA 371
           +  PPGK G  KRDF F+HYAERSSALKAVK+TE+YE+ GQ LEVVLAKPQ+++K D  +
Sbjct: 303 IVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVNGQPLEVVLAKPQAERKHDPSS 362

Query: 372 YSHISGSHPNHLLHAGYGSYGGSPYGSLG-GYGVTAGLHQPMIYGRGPMPAGMQMVPMVL 431
           YS+ +   P   +H  +G +  +PYG++G G G+     QPMIYGRG MP GMQMVPM+L
Sbjct: 363 YSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFSQPMIYGRGAMPTGMQMVPMLL 422

Query: 432 PDGRIGYVLQQPGVPM---PPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYRPY 483
           PDGR+GYVLQQPG+PM   PP R RR++R++GS G + R   S   D    GRRYRPY
Sbjct: 423 PDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSGRD-NSHEHDGNRGGRRYRPY 467

[Close]

BLAST of Csor.00g108330 vs. TAIR 10
Match: AT3G52660.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 401.7 bits (1031), Expect = 8.0e-112
Identity = 221/485 (45.57%), Postives = 323/485 (66.60%), Query Frame = 0


Query: 3   DGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNTED 62
           D  E EERVDL+ DN  EE+   +EE V+ + V+       EE++EE+ EE + E     
Sbjct: 13  DSMESEERVDLDGDNDPEEI---LEEEVEYEEVE-------EEEIEEIEEEIEEE----- 72

Query: 63  KFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEEDL 122
                    + +E  E  + + +  +E++ ++H +LLALPPHGSEV++GG+  D +E DL
Sbjct: 73  ---------VEVEEEEEEEDAVATEEEEEKKRHVELLALPPHGSEVYLGGIPTDATEGDL 132

Query: 123 RDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVKGKTIRCSLS 182
           +  C S+GE+ E+RI++++DSG+ KGYAF++F++K+ A +AI+ L+  + +GK I+CS +
Sbjct: 133 KGFCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTLNNTDFRGKRIKCSTT 192

Query: 183 DSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNACA 242
            +KHRLF+GNVP++W E + K+    +GPGV+ +EL K+PQN  RNRGFAF+ YYN+ACA
Sbjct: 193 QAKHRLFLGNVPRNWMESDIKKAANRIGPGVQIVELPKEPQNMGRNRGFAFIEYYNHACA 252

Query: 243 DYSRQKMSSANFKLDGNSPTVSWADPKS-TPDNSAASQVKALYVKNIPENTTTEQLKELF 302
           +YS+QKMS+ +FKLD N+PTVSWA+ +S    +S+ASQVKALY+KN+P + T E+LK LF
Sbjct: 253 EYSKQKMSNPSFKLDDNAPTVSWAESRSGGGGDSSASQVKALYIKNLPRDITQERLKALF 312

Query: 303 QQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQS 362
           + HG + KV +PP K G     + F+HYAER+S ++A+K TE+YEI+G +L+  LAKPQ+
Sbjct: 313 EHHGKILKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEIDGHMLDCTLAKPQA 372

Query: 363 DKKPD-GAYSHISGS--HPNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPA 422
           D+K +     ++  S   PN+     YG    SP+G+LGG+G +A   QP+++  G    
Sbjct: 373 DQKTNTNTVQNVQKSQLQPNYPPLLSYG-MAPSPFGALGGFGASA-YSQPLMHAGGHAAG 432

Query: 423 GMQMVPMVLPDGRIGYVLQQPGV-PMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGR 482
           GM M+P++LPDGRIGYVLQQPG+  MP    R S    G  G +S SG   S D      
Sbjct: 433 GMSMMPIMLPDGRIGYVLQQPGLAAMPQPPPRHSPPYRGGSGSSSSSGSKRSSDNGRGRS 471

The following BLAST results are available for this feature:

BLAST of Csor.00g108330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ASP6	4.4e-163	61.52	Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana OX=3702 GN=LIF...	[more]
O60506	1.1e-44	33.64	Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=...	[more]
Q7TMK9	1.4e-44	33.64	Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE...	[more]
Q7TP47	1.4e-44	33.64	Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncr...	[more]
O43390	1.4e-44	32.15	Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1...	[more]

BLAST of Csor.00g108330 vs. NCBI nr


Match Name	Identity	Description
KAG6597046.1	100.00	Heterogeneous nuclear ribonucleoprotein Q, partial [Cucurbita argyrosperma subsp...	[more]
XP_022938168.1	99.59	heterogeneous nuclear ribonucleoprotein Q-like isoform X2 [Cucurbita moschata] >...	[more]
XP_022938159.1	99.59	heterogeneous nuclear ribonucleoprotein Q-like isoform X1 [Cucurbita moschata]	[more]
XP_023540270.1	99.38	heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo] >XP_...	[more]
XP_022974824.1	99.17	heterogeneous nuclear ribonucleoprotein Q-like isoform X2 [Cucurbita maxima] >XP...	[more]

BLAST of Csor.00g108330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FDC4	0.0	99.59	heterogeneous nuclear ribonucleoprotein Q-like isoform X2 OS=Cucurbita moschata ...	[more]
A0A6J1FD95	0.0	99.59	heterogeneous nuclear ribonucleoprotein Q-like isoform X1 OS=Cucurbita moschata ...	[more]
A0A6J1IBB5	0.0	99.17	heterogeneous nuclear ribonucleoprotein Q-like isoform X2 OS=Cucurbita maxima OX...	[more]
A0A6J1IHG4	0.0	99.17	heterogeneous nuclear ribonucleoprotein Q-like isoform X1 OS=Cucurbita maxima OX...	[more]
A0A1S3AUX7	1.54e-315	91.91	heterogeneous nuclear ribonucleoprotein R isoform X2 OS=Cucumis melo OX=3656 GN=...	[more]

BLAST of Csor.00g108330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00830.1	3.1e-164	61.52	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.2	3.1e-164	61.52	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.4	3.3e-158	60.60	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.3	7.7e-155	60.88	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G52660.1	8.0e-112	45.57	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003954	RNA recognition motif domain, eukaryote	SMART	SM00361	rrm2_1	coord: 107..180 e-value: 5.8E-8 score: 42.5
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 282..355 e-value: 2.9E-18 score: 76.7 coord: 187..264 e-value: 7.4E-11 score: 52.1 coord: 107..180 e-value: 2.0E-28 score: 110.5
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 108..178 e-value: 2.6E-22 score: 78.4 coord: 188..254 e-value: 1.3E-9 score: 37.7 coord: 283..352 e-value: 1.3E-16 score: 60.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 186..268 score: 12.35567
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 106..184 score: 20.883369
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 281..359 score: 15.732639
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 5..186 e-value: 4.4E-31 score: 110.0
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 187..267 e-value: 1.7E-19 score: 71.7
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 269..400 e-value: 1.2E-21 score: 79.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 448..471
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 436..482
None	No IPR available	PANTHER	PTHR48024:SF13	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN Q	coord: 2..480
None	No IPR available	PANTHER	PTHR48024	GEO13361P1-RELATED	coord: 2..480
None	No IPR available	CDD	cd12251	RRM3_hnRNPR_like	coord: 280..359 e-value: 9.57625E-32 score: 114.259
None	No IPR available	CDD	cd00590	RRM_SF	coord: 108..180 e-value: 1.91327E-25 score: 96.9905
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 103..186
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 186..363

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g108330.m01	Csor.00g108330.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding