Csor.00g108150 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g108150
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	metalloendoproteinase 4-MMP-like
Location	Csor_Chr06: 7487956 .. 7488903 (-)
RNA-Seq Expression	Csor.00g108150
Synteny	Csor.00g108150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCTGCCATTAATTCCTCGTTCTCGCTACCTTCTCTTGGCTCTGTTCTTCCTCTGCTTGCCATCCATTATTCCTTCCTCCGCCGTGACTTTCCGGCCAAATTCTACTGCACGGCGGTGGCGCGTGTCCGACACGTTGCATGGACCTCATGCAACGGCGCGTTACGTATATTTTCCCGGGAAGCCACGGTGGACGCGGCGAATGCCGATGGTGCTGACGTACGCATTTTTTAAGGAAAATTGGGTCAGCAATTTGAGTTTGAAAGACGTGAAATTCGTATTTCGTACGGCGTTTTCTAAATGGGCCCACGTGATTCCGGTGAGGTTCGAGGAGACGGAGGATTATGGGTTTGCTGATATTAAAATCGGGTTTTATAGAGGCGATCACGGCGACGGGCAGCCGTTCGACGGCGTGCTTGGGGTGTTGGCGCATTCTTTTTCTCCGGAGATTGGGAGGCTCCACCTGGATGCGGCGGAGACGTGGGCGGTTGATTTCGAGGAGGAGAAGTCGGCGGTGGCGGTTGATTTGGAATCTGTGGCGACGCATGAGATTGGGCATTTGTTGGGGTTGGGTCACAGCTCGGTGAGAGAATCAGTGATGTATCCCAGCTTGAAGCCGAGGGAAAAGAAGGCGAATTTGGAAGTGGATGACGTGGAAGGTGTGCAAGCTTTGTACGGATCCAATCCCAATTTCAGGTTTGAGTCTTTGGAATTGGAGTCTGATACTTCTGCCACTCACCCACCTGTTTCCACGTGGACAATGACCTGGAATTTTCCCATTTCTTTCTTTTTCTTTTTCTTTTTCACTTCCAATTTTTTTGTTTTTCCATGACCACTAAAACAGCGTCGTTTTGCAGTGAGATTTTGATTTTTCCGTGAATCCAATAGACGGGCTCACTATACGTACTCCTATGCTCGACTACATGCTCTCATCTTGACCGAATAG

mRNA sequence

ATGTTTCTGCCATTAATTCCTCGTTCTCGCTACCTTCTCTTGGCTCTGTTCTTCCTCTGCTTGCCATCCATTATTCCTTCCTCCGCCGTGACTTTCCGGCCAAATTCTACTGCACGGCGGTGGCGCGTGTCCGACACGTTGCATGGACCTCATGCAACGGCGCGTTACGTATATTTTCCCGGGAAGCCACGGTGGACGCGGCGAATGCCGATGGTGCTGACGTACGCATTTTTTAAGGAAAATTGGGTCAGCAATTTGAGTTTGAAAGACGTGAAATTCGTATTTCGTACGGCGTTTTCTAAATGGGCCCACGTGATTCCGGTGAGGTTCGAGGAGACGGAGGATTATGGGTTTGCTGATATTAAAATCGGGTTTTATAGAGGCGATCACGGCGACGGGCAGCCGTTCGACGGCGTGCTTGGGGTGTTGGCGCATTCTTTTTCTCCGGAGATTGGGAGGCTCCACCTGGATGCGGCGGAGACGTGGGCGGTTGATTTCGAGGAGGAGAAGTCGGCGGTGGCGGTTGATTTGGAATCTGTGGCGACGCATGAGATTGGGCATTTGTTGGGGTTGGGTCACAGCTCGGTGAGAGAATCAGTGATGTATCCCAGCTTGAAGCCGAGGGAAAAGAAGGCGAATTTGGAAGTGGATGACGTGGAAGGTGTGCAAGCTTTGTACGGATCCAATCCCAATTTCAGACGGGCTCACTATACGTACTCCTATGCTCGACTACATGCTCTCATCTTGACCGAATAG

Coding sequence (CDS)

ATGTTTCTGCCATTAATTCCTCGTTCTCGCTACCTTCTCTTGGCTCTGTTCTTCCTCTGCTTGCCATCCATTATTCCTTCCTCCGCCGTGACTTTCCGGCCAAATTCTACTGCACGGCGGTGGCGCGTGTCCGACACGTTGCATGGACCTCATGCAACGGCGCGTTACGTATATTTTCCCGGGAAGCCACGGTGGACGCGGCGAATGCCGATGGTGCTGACGTACGCATTTTTTAAGGAAAATTGGGTCAGCAATTTGAGTTTGAAAGACGTGAAATTCGTATTTCGTACGGCGTTTTCTAAATGGGCCCACGTGATTCCGGTGAGGTTCGAGGAGACGGAGGATTATGGGTTTGCTGATATTAAAATCGGGTTTTATAGAGGCGATCACGGCGACGGGCAGCCGTTCGACGGCGTGCTTGGGGTGTTGGCGCATTCTTTTTCTCCGGAGATTGGGAGGCTCCACCTGGATGCGGCGGAGACGTGGGCGGTTGATTTCGAGGAGGAGAAGTCGGCGGTGGCGGTTGATTTGGAATCTGTGGCGACGCATGAGATTGGGCATTTGTTGGGGTTGGGTCACAGCTCGGTGAGAGAATCAGTGATGTATCCCAGCTTGAAGCCGAGGGAAAAGAAGGCGAATTTGGAAGTGGATGACGTGGAAGGTGTGCAAGCTTTGTACGGATCCAATCCCAATTTCAGACGGGCTCACTATACGTACTCCTATGCTCGACTACATGCTCTCATCTTGACCGAATAG

Protein sequence

MFLPLIPRSRYLLLALFFLCLPSIIPSSAVTFRPNSTARRWRVSDTLHGPHATARYVYFPGKPRWTRRMPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFADIKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFRRAHYTYSYARLHALILTE

Homology

[Close]

BLAST of Csor.00g108150 vs. ExPASy Swiss-Prot
Match: Q8GWW6 (Metalloendoproteinase 4-MMP OS=Arabidopsis thaliana OX=3702 GN=4MMP PE=1 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 2.3e-75
Identity = 132/182 (72.53%), Postives = 153/182 (84.07%), Query Frame = 0


Query: 51  HATARYVYFPGKPRWTRRMPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRF 110
           H   +YVYFPG+PRWTR +P+ LTYAF +EN    L+  D++ VFR AF KWA VIPV F
Sbjct: 120 HTGKKYVYFPGRPRWTRDVPLKLTYAFSQENLTPYLAPTDIRRVFRRAFGKWASVIPVSF 179

Query: 111 EETEDYGFADIKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEK 170
            ETEDY  ADIKIGF+ GDHGDG+PFDGVLGVLAH+FSPE GRLHLD AETWAVDF+EEK
Sbjct: 180 IETEDYVIADIKIGFFNGDHGDGEPFDGVLGVLAHTFSPENGRLHLDKAETWAVDFDEEK 239

Query: 171 SAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNP 230
           S+VAVDLESVA HEIGH+LGLGHSSV+++ MYP+LKPR KK NL +DDV GVQ+LYG+NP
Sbjct: 240 SSVAVDLESVAVHEIGHVLGLGHSSVKDAAMYPTLKPRSKKVNLNMDDVVGVQSLYGTNP 299

Query: 231 NF 233
           NF
Sbjct: 300 NF 301

[Close]

BLAST of Csor.00g108150 vs. ExPASy Swiss-Prot
Match: O23507 (Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana OX=3702 GN=1MMP PE=1 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.0e-62
Identity = 123/191 (64.40%), Postives = 140/191 (73.30%), Query Frame = 0


Query: 51  HATARYVYFPGKPRWTRRMPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRF 110
           H TA Y YF GKP+W R     LTYA  K + +  L+ +DVK VFR AFS+W+ VIPV F
Sbjct: 145 HTTAHYTYFNGKPKWNRD---TLTYAISKTHKLDYLTSEDVKTVFRRAFSQWSSVIPVSF 204

Query: 111 EETEDYGFADIKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFE-EE 170
           EE +D+  AD+KIGFY GDHGDG PFDGVLG LAH+F+PE GRLHLDAAETW VD + + 
Sbjct: 205 EEVDDFTTADLKIGFYAGDHGDGLPFDGVLGTLAHAFAPENGRLHLDAAETWIVDDDLKG 264

Query: 171 KSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSN 230
            S VAVDLESVATHEIGHLLGLGHSS   +VMYPSL+PR KK +L VDDV GV  LYG N
Sbjct: 265 SSEVAVDLESVATHEIGHLLGLGHSSQESAVMYPSLRPRTKKVDLTVDDVAGVLKLYGPN 324

Query: 231 PNFRRAHYTYS 241
           P  R    T S
Sbjct: 325 PKLRLDSLTQS 332

[Close]

BLAST of Csor.00g108150 vs. ExPASy Swiss-Prot
Match: O04529 (Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana OX=3702 GN=2MMP PE=1 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 3.1e-51
Identity = 102/185 (55.14%), Postives = 127/185 (68.65%), Query Frame = 0


Query: 51  HATARYVYFPGKPRWTRRMPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRF 110
           HA  RY  FPG+PRW R     LTYAF  +N ++    ++VK VF  AF +W+ V  + F
Sbjct: 150 HAVKRYTLFPGEPRWPRNR-RDLTYAFDPKNPLT----EEVKSVFSRAFGRWSDVTALNF 209

Query: 111 EETEDYGFADIKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEE- 170
             +E +  +DI IGFY GDHGDG+PFDGVLG LAH+FSP  G+ HLDA E W V  + + 
Sbjct: 210 TLSESFSTSDITIGFYTGDHGDGEPFDGVLGTLAHAFSPPSGKFHLDADENWVVSGDLDS 269

Query: 171 --KSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYG 230
                 AVDLESVA HEIGHLLGLGHSSV ES+MYP++   ++K +L  DDVEG+Q LYG
Sbjct: 270 FLSVTAAVDLESVAVHEIGHLLGLGHSSVEESIMYPTITTGKRKVDLTNDDVEGIQYLYG 329

Query: 231 SNPNF 233
           +NPNF
Sbjct: 330 ANPNF 329

[Close]

BLAST of Csor.00g108150 vs. ExPASy Swiss-Prot
Match: Q5XF51 (Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana OX=3702 GN=3MMP PE=1 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 6.4e-49
Identity = 98/186 (52.69%), Postives = 121/186 (65.05%), Query Frame = 0


Query: 51  HATARYVYFPGKPRWTRRMPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRF 110
           HA   Y +FPG+PRW R     LTYAF   N ++    ++VK VF  AF++W  V P+ F
Sbjct: 154 HAVKHYSFFPGEPRWPRNR-RDLTYAFDPRNALT----EEVKSVFSRAFTRWEEVTPLTF 213

Query: 111 EETEDYGFADIKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEK 170
              E +  +DI IGFY G+HGDG+PFDG +  LAH+FSP  G  HLD  E W V  E   
Sbjct: 214 TRVERFSTSDISIGFYSGEHGDGEPFDGPMRTLAHAFSPPTGHFHLDGEENWIVSGEGGD 273

Query: 171 SAV----AVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALY 230
             +    AVDLESVA HEIGHLLGLGHSSV  S+MYP+++   +K +L  DDVEGVQ LY
Sbjct: 274 GFISVSEAVDLESVAVHEIGHLLGLGHSSVEGSIMYPTIRTGRRKVDLTTDDVEGVQYLY 333

Query: 231 GSNPNF 233
           G+NPNF
Sbjct: 334 GANPNF 334

[Close]

BLAST of Csor.00g108150 vs. ExPASy Swiss-Prot
Match: Q9ZUJ5 (Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana OX=3702 GN=5MMP PE=1 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.0e-46
Identity = 95/184 (51.63%), Postives = 122/184 (66.30%), Query Frame = 0


Query: 53  TARYVYFPGKPRWTRRMPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEE 112
           T +Y +FPGKPRW +R    LTYAF  +N   NL+  +VK VF  AF++WA V P+ F  
Sbjct: 140 TEKYSFFPGKPRWPKR-KRDLTYAFAPQN---NLT-DEVKRVFSRAFTRWAEVTPLNFTR 199

Query: 113 TEDYGFADIKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSA 172
           +E    ADI IGF+ G+HGDG+PFDG +G LAH+ SP  G LHLD  E W +   E    
Sbjct: 200 SESILRADIVIGFFSGEHGDGEPFDGAMGTLAHASSPPTGMLHLDGDEDWLISNGEISRR 259

Query: 173 V-----AVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYG 232
           +      VDLESVA HEIGHLLGLGHSSV +++M+P++   ++K  L  DD+EG+Q LYG
Sbjct: 260 ILPVTTVVDLESVAVHEIGHLLGLGHSSVEDAIMFPAISGGDRKVELAKDDIEGIQHLYG 318

[Close]

BLAST of Csor.00g108150 vs. NCBI nr
Match: KAG6597028.1 (Metalloendoproteinase 4-MMP, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 511 bits (1317), Expect = 5.63e-183
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0


Query: 1   MFLPLIPRSRYLLLALFFLCLPSIIPSSAVTFRPNSTARRWRVSDTLHGPHATARYVYFP 60
           MFLPLIPRSRYLLLALFFLCLPSIIPSSAVTFRPNSTARRWRVSDTLHGPHATARYVYFP
Sbjct: 1   MFLPLIPRSRYLLLALFFLCLPSIIPSSAVTFRPNSTARRWRVSDTLHGPHATARYVYFP 60

Query: 61  GKPRWTRRMPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD 120
           GKPRWTRRMPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD
Sbjct: 61  GKPRWTRRMPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD 120

Query: 121 IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV 180
           IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV
Sbjct: 121 IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV 180

Query: 181 ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFRRAHYTYS 240
           ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFRRAHYTYS
Sbjct: 181 ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFRRAHYTYS 240

Query: 241 YARLHALILTE 251
           YARLHALILTE
Sbjct: 241 YARLHALILTE 251

[Close]

BLAST of Csor.00g108150 vs. NCBI nr
Match: KAG7028506.1 (Metalloendoproteinase 4-MMP, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 494 bits (1272), Expect = 8.20e-176
Identity = 248/270 (91.85%), Postives = 249/270 (92.22%), Query Frame = 0


Query: 1   MFLPLIPRSRYLLLALFFLCLPSIIPSSAVTFRPNSTARRWRVSDTLHGPHATARYVYFP 60
           MFLPLIPRSRYLLLALFFLCLP IIPSSAVTFRPNSTAR+WRVSDTLHGPHATARYVYFP
Sbjct: 1   MFLPLIPRSRYLLLALFFLCLPPIIPSSAVTFRPNSTARQWRVSDTLHGPHATARYVYFP 60

Query: 61  GKPRWTRRMPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD 120
           GKPRWTRRMPMVLTYAF KENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD
Sbjct: 61  GKPRWTRRMPMVLTYAFLKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD 120

Query: 121 IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV 180
           IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV
Sbjct: 121 IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV 180

Query: 181 ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFR------- 240
           ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFR       
Sbjct: 181 ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFRFESLELE 240

Query: 241 ------------RAHYTYSYARLHALILTE 251
                       RAHYTYSYARLHALILTE
Sbjct: 241 SDTSATHPPVSTRAHYTYSYARLHALILTE 270

[Close]

BLAST of Csor.00g108150 vs. NCBI nr
Match: XP_022944853.1 (metalloendoproteinase 4-MMP-like [Cucurbita moschata])

HSP 1 Score: 474 bits (1221), Expect = 1.57e-168
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0


Query: 1   MFLPLIPRSRYLLLALFFLCLPSIIPSSAVTFRPNSTARRWRVSDTLHGPHATARYVYFP 60
           MFLPLIPRSRYLLLALFFLCLPSIIPSSAVTFRPNSTARRWRVSDTLHGPHATARYVYFP
Sbjct: 1   MFLPLIPRSRYLLLALFFLCLPSIIPSSAVTFRPNSTARRWRVSDTLHGPHATARYVYFP 60

Query: 61  GKPRWTRRMPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD 120
           GKPRWTRRMPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD
Sbjct: 61  GKPRWTRRMPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD 120

Query: 121 IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV 180
           IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV
Sbjct: 121 IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV 180

Query: 181 ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNF 232
           ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNF
Sbjct: 181 ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNF 232

[Close]

BLAST of Csor.00g108150 vs. NCBI nr
Match: XP_023539433.1 (metalloendoproteinase 4-MMP-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 467 bits (1201), Expect = 7.01e-165
Identity = 229/233 (98.28%), Postives = 229/233 (98.28%), Query Frame = 0


Query: 1   MFLPLIPRSRYLLLALFFLCLPSIIPSSAVTFRPNSTARRWRVSDTLHGPHATARYVYFP 60
           MFLPLIP SRYLLLALFFLCLP IIPSSAVTFRPNSTARRWRVSDTLHGPHATARYVYFP
Sbjct: 1   MFLPLIPPSRYLLLALFFLCLPPIIPSSAVTFRPNSTARRWRVSDTLHGPHATARYVYFP 60

Query: 61  GKPRWTRRMPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD 120
           GKPRWTRRMPMVLTYAF KENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD
Sbjct: 61  GKPRWTRRMPMVLTYAFLKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD 120

Query: 121 IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV 180
           IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFE EKSAVAVDLESV
Sbjct: 121 IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEVEKSAVAVDLESV 180

Query: 181 ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFR 233
           ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFR
Sbjct: 181 ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFR 233

[Close]

BLAST of Csor.00g108150 vs. NCBI nr
Match: XP_022974263.1 (metalloendoproteinase 4-MMP-like [Cucurbita maxima])

HSP 1 Score: 458 bits (1178), Expect = 1.68e-161
Identity = 223/233 (95.71%), Postives = 226/233 (97.00%), Query Frame = 0


Query: 1   MFLPLIPRSRYLLLALFFLCLPSIIPSSAVTFRPNSTARRWRVSDTLHGPHATARYVYFP 60
           MFLP IP  RYLLLALFFLCLP IIPSSAVTFR NSTARRWRV+DTLHGPH TARY+YFP
Sbjct: 1   MFLPSIPPPRYLLLALFFLCLPPIIPSSAVTFRSNSTARRWRVADTLHGPHVTARYLYFP 60

Query: 61  GKPRWTRRMPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD 120
           GKPRWTRRMPMVLTYAF KENW+SNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD
Sbjct: 61  GKPRWTRRMPMVLTYAFLKENWISNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD 120

Query: 121 IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV 180
           IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV
Sbjct: 121 IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV 180

Query: 181 ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFR 233
           ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFR
Sbjct: 181 ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFR 233

[Close]

BLAST of Csor.00g108150 vs. ExPASy TrEMBL
Match: A0A6J1FZ72 (metalloendoproteinase 4-MMP-like OS=Cucurbita moschata OX=3662 GN=LOC111449256 PE=4 SV=1)

HSP 1 Score: 474 bits (1221), Expect = 7.61e-169
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0


Query: 1   MFLPLIPRSRYLLLALFFLCLPSIIPSSAVTFRPNSTARRWRVSDTLHGPHATARYVYFP 60
           MFLPLIPRSRYLLLALFFLCLPSIIPSSAVTFRPNSTARRWRVSDTLHGPHATARYVYFP
Sbjct: 1   MFLPLIPRSRYLLLALFFLCLPSIIPSSAVTFRPNSTARRWRVSDTLHGPHATARYVYFP 60

Query: 61  GKPRWTRRMPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD 120
           GKPRWTRRMPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD
Sbjct: 61  GKPRWTRRMPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD 120

Query: 121 IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV 180
           IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV
Sbjct: 121 IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV 180

Query: 181 ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNF 232
           ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNF
Sbjct: 181 ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNF 232

[Close]

BLAST of Csor.00g108150 vs. ExPASy TrEMBL
Match: A0A6J1IFQ0 (metalloendoproteinase 4-MMP-like OS=Cucurbita maxima OX=3661 GN=LOC111472903 PE=4 SV=1)

HSP 1 Score: 458 bits (1178), Expect = 8.12e-162
Identity = 223/233 (95.71%), Postives = 226/233 (97.00%), Query Frame = 0


Query: 1   MFLPLIPRSRYLLLALFFLCLPSIIPSSAVTFRPNSTARRWRVSDTLHGPHATARYVYFP 60
           MFLP IP  RYLLLALFFLCLP IIPSSAVTFR NSTARRWRV+DTLHGPH TARY+YFP
Sbjct: 1   MFLPSIPPPRYLLLALFFLCLPPIIPSSAVTFRSNSTARRWRVADTLHGPHVTARYLYFP 60

Query: 61  GKPRWTRRMPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD 120
           GKPRWTRRMPMVLTYAF KENW+SNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD
Sbjct: 61  GKPRWTRRMPMVLTYAFLKENWISNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFAD 120

Query: 121 IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV 180
           IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV
Sbjct: 121 IKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESV 180

Query: 181 ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFR 233
           ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFR
Sbjct: 181 ATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFR 233

[Close]

BLAST of Csor.00g108150 vs. ExPASy TrEMBL
Match: A0A5D3DB58 (Metalloendoproteinase 4-MMP OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00450 PE=4 SV=1)

HSP 1 Score: 383 bits (984), Expect = 4.53e-132
Identity = 194/245 (79.18%), Postives = 210/245 (85.71%), Query Frame = 0


Query: 1   MFLPLIPRSRYLLLALFFLCLPSIIP----------SSAVTFRPNSTAR--RWRVSDTLH 60
           MFLPL      LLL  FFLC PS +P          ++ + FR NS++   R R+++TLH
Sbjct: 1   MFLPL------LLLLFFFLCTPSCLPYPTTLPQNSTAAVIIFRSNSSSLQGRRRLTETLH 60

Query: 61  GPHATARYVYFPGKPRWTRRMPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPV 120
            PHAT RYV+FPGKPRW RRMPMVLTYAFFKENW+SNLSLKDV+ VFR AFSKWAHVIPV
Sbjct: 61  NPHATERYVFFPGKPRWARRMPMVLTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPV 120

Query: 121 RFEETEDYGFADIKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEE 180
            FEET+DYG+ADIKIGFYRGDH DGQ FDGVLGVLAHSFSPEIGRLHLDAAETWAVDFE+
Sbjct: 121 SFEETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEK 180

Query: 181 EKSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGS 233
           EKSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGS
Sbjct: 181 EKSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGS 239

[Close]

BLAST of Csor.00g108150 vs. ExPASy TrEMBL
Match: A0A1S3AUH8 (metalloendoproteinase 4-MMP OS=Cucumis melo OX=3656 GN=LOC103483123 PE=4 SV=1)

HSP 1 Score: 383 bits (984), Expect = 4.53e-132
Identity = 194/245 (79.18%), Postives = 210/245 (85.71%), Query Frame = 0


Query: 1   MFLPLIPRSRYLLLALFFLCLPSIIP----------SSAVTFRPNSTAR--RWRVSDTLH 60
           MFLPL      LLL  FFLC PS +P          ++ + FR NS++   R R+++TLH
Sbjct: 1   MFLPL------LLLLFFFLCTPSCLPYPTTLPQNSTAAVIIFRSNSSSLQGRRRLTETLH 60

Query: 61  GPHATARYVYFPGKPRWTRRMPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPV 120
            PHAT RYV+FPGKPRW RRMPMVLTYAFFKENW+SNLSLKDV+ VFR AFSKWAHVIPV
Sbjct: 61  NPHATERYVFFPGKPRWARRMPMVLTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPV 120

Query: 121 RFEETEDYGFADIKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEE 180
            FEET+DYG+ADIKIGFYRGDH DGQ FDGVLGVLAHSFSPEIGRLHLDAAETWAVDFE+
Sbjct: 121 SFEETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEK 180

Query: 181 EKSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGS 233
           EKSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGS
Sbjct: 181 EKSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGS 239

[Close]

BLAST of Csor.00g108150 vs. ExPASy TrEMBL
Match: A0A6J1DB68 (metalloendoproteinase 4-MMP OS=Momordica charantia OX=3673 GN=LOC111018517 PE=4 SV=1)

HSP 1 Score: 377 bits (967), Expect = 1.69e-129
Identity = 190/236 (80.51%), Postives = 199/236 (84.32%), Query Frame = 0


Query: 10  RYLLLALFFLCLPSIIPSSAVTFRPNSTA------------RRWRVSDTLHGPHATARYV 69
           R LLLALFFL  P  IPS  V    N TA              WRVSDTLHGPHATARYV
Sbjct: 3   RSLLLALFFLGSPPCIPSRTVPVLKNRTAGLGLGLPIITAAAGWRVSDTLHGPHATARYV 62

Query: 70  YFPGKPRWTRRMPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYG 129
            FPGKPRWTRRMPMVLTYAF ++NW+SNLS+KDVK VFR +FSKWA VIPV FEET+DY 
Sbjct: 63  LFPGKPRWTRRMPMVLTYAFLEDNWMSNLSVKDVKRVFRKSFSKWASVIPVSFEETDDYD 122

Query: 130 FADIKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDL 189
           +ADIKIGFY+GDH DGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFE EKSAVAVDL
Sbjct: 123 YADIKIGFYKGDHSDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEREKSAVAVDL 182

Query: 190 ESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFR 233
           ESVATHEIGHLLGLGHS VRESVMYPSLK REKKANLEVDDVEGVQALYGSNPNF+
Sbjct: 183 ESVATHEIGHLLGLGHSRVRESVMYPSLKAREKKANLEVDDVEGVQALYGSNPNFK 238

[Close]

BLAST of Csor.00g108150 vs. TAIR 10
Match: AT2G45040.1 (Matrixin family protein )

HSP 1 Score: 283.5 bits (724), Expect = 1.7e-76
Identity = 132/182 (72.53%), Postives = 153/182 (84.07%), Query Frame = 0


Query: 51  HATARYVYFPGKPRWTRRMPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRF 110
           H   +YVYFPG+PRWTR +P+ LTYAF +EN    L+  D++ VFR AF KWA VIPV F
Sbjct: 120 HTGKKYVYFPGRPRWTRDVPLKLTYAFSQENLTPYLAPTDIRRVFRRAFGKWASVIPVSF 179

Query: 111 EETEDYGFADIKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEK 170
            ETEDY  ADIKIGF+ GDHGDG+PFDGVLGVLAH+FSPE GRLHLD AETWAVDF+EEK
Sbjct: 180 IETEDYVIADIKIGFFNGDHGDGEPFDGVLGVLAHTFSPENGRLHLDKAETWAVDFDEEK 239

Query: 171 SAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNP 230
           S+VAVDLESVA HEIGH+LGLGHSSV+++ MYP+LKPR KK NL +DDV GVQ+LYG+NP
Sbjct: 240 SSVAVDLESVAVHEIGHVLGLGHSSVKDAAMYPTLKPRSKKVNLNMDDVVGVQSLYGTNP 299

Query: 231 NF 233
           NF
Sbjct: 300 NF 301

[Close]

BLAST of Csor.00g108150 vs. TAIR 10
Match: AT4G16640.1 (Matrixin family protein )

HSP 1 Score: 241.5 bits (615), Expect = 7.2e-64
Identity = 123/191 (64.40%), Postives = 140/191 (73.30%), Query Frame = 0


Query: 51  HATARYVYFPGKPRWTRRMPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRF 110
           H TA Y YF GKP+W R     LTYA  K + +  L+ +DVK VFR AFS+W+ VIPV F
Sbjct: 145 HTTAHYTYFNGKPKWNRD---TLTYAISKTHKLDYLTSEDVKTVFRRAFSQWSSVIPVSF 204

Query: 111 EETEDYGFADIKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFE-EE 170
           EE +D+  AD+KIGFY GDHGDG PFDGVLG LAH+F+PE GRLHLDAAETW VD + + 
Sbjct: 205 EEVDDFTTADLKIGFYAGDHGDGLPFDGVLGTLAHAFAPENGRLHLDAAETWIVDDDLKG 264

Query: 171 KSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSN 230
            S VAVDLESVATHEIGHLLGLGHSS   +VMYPSL+PR KK +L VDDV GV  LYG N
Sbjct: 265 SSEVAVDLESVATHEIGHLLGLGHSSQESAVMYPSLRPRTKKVDLTVDDVAGVLKLYGPN 324

Query: 231 PNFRRAHYTYS 241
           P  R    T S
Sbjct: 325 PKLRLDSLTQS 332

[Close]

BLAST of Csor.00g108150 vs. TAIR 10
Match: AT1G70170.1 (matrix metalloproteinase )

HSP 1 Score: 203.4 bits (516), Expect = 2.2e-52
Identity = 102/185 (55.14%), Postives = 127/185 (68.65%), Query Frame = 0


Query: 51  HATARYVYFPGKPRWTRRMPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRF 110
           HA  RY  FPG+PRW R     LTYAF  +N ++    ++VK VF  AF +W+ V  + F
Sbjct: 150 HAVKRYTLFPGEPRWPRNR-RDLTYAFDPKNPLT----EEVKSVFSRAFGRWSDVTALNF 209

Query: 111 EETEDYGFADIKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEE- 170
             +E +  +DI IGFY GDHGDG+PFDGVLG LAH+FSP  G+ HLDA E W V  + + 
Sbjct: 210 TLSESFSTSDITIGFYTGDHGDGEPFDGVLGTLAHAFSPPSGKFHLDADENWVVSGDLDS 269

Query: 171 --KSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYG 230
                 AVDLESVA HEIGHLLGLGHSSV ES+MYP++   ++K +L  DDVEG+Q LYG
Sbjct: 270 FLSVTAAVDLESVAVHEIGHLLGLGHSSVEESIMYPTITTGKRKVDLTNDDVEGIQYLYG 329

Query: 231 SNPNF 233
           +NPNF
Sbjct: 330 ANPNF 329

[Close]

BLAST of Csor.00g108150 vs. TAIR 10
Match: AT1G24140.1 (Matrixin family protein )

HSP 1 Score: 195.7 bits (496), Expect = 4.6e-50
Identity = 98/186 (52.69%), Postives = 121/186 (65.05%), Query Frame = 0


Query: 51  HATARYVYFPGKPRWTRRMPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRF 110
           HA   Y +FPG+PRW R     LTYAF   N ++    ++VK VF  AF++W  V P+ F
Sbjct: 154 HAVKHYSFFPGEPRWPRNR-RDLTYAFDPRNALT----EEVKSVFSRAFTRWEEVTPLTF 213

Query: 111 EETEDYGFADIKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEK 170
              E +  +DI IGFY G+HGDG+PFDG +  LAH+FSP  G  HLD  E W V  E   
Sbjct: 214 TRVERFSTSDISIGFYSGEHGDGEPFDGPMRTLAHAFSPPTGHFHLDGEENWIVSGEGGD 273

Query: 171 SAV----AVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALY 230
             +    AVDLESVA HEIGHLLGLGHSSV  S+MYP+++   +K +L  DDVEGVQ LY
Sbjct: 274 GFISVSEAVDLESVAVHEIGHLLGLGHSSVEGSIMYPTIRTGRRKVDLTTDDVEGVQYLY 333

Query: 231 GSNPNF 233
           G+NPNF
Sbjct: 334 GANPNF 334

[Close]

BLAST of Csor.00g108150 vs. TAIR 10
Match: AT1G59970.1 (Matrixin family protein )

HSP 1 Score: 188.3 bits (477), Expect = 7.3e-48
Identity = 95/184 (51.63%), Postives = 122/184 (66.30%), Query Frame = 0


Query: 53  TARYVYFPGKPRWTRRMPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEE 112
           T +Y +FPGKPRW +R    LTYAF  +N   NL+  +VK VF  AF++WA V P+ F  
Sbjct: 140 TEKYSFFPGKPRWPKR-KRDLTYAFAPQN---NLT-DEVKRVFSRAFTRWAEVTPLNFTR 199

Query: 113 TEDYGFADIKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSA 172
           +E    ADI IGF+ G+HGDG+PFDG +G LAH+ SP  G LHLD  E W +   E    
Sbjct: 200 SESILRADIVIGFFSGEHGDGEPFDGAMGTLAHASSPPTGMLHLDGDEDWLISNGEISRR 259

Query: 173 V-----AVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYG 232
           +      VDLESVA HEIGHLLGLGHSSV +++M+P++   ++K  L  DD+EG+Q LYG
Sbjct: 260 ILPVTTVVDLESVAVHEIGHLLGLGHSSVEDAIMFPAISGGDRKVELAKDDIEGIQHLYG 318

The following BLAST results are available for this feature:

BLAST of Csor.00g108150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWW6	2.3e-75	72.53	Metalloendoproteinase 4-MMP OS=Arabidopsis thaliana OX=3702 GN=4MMP PE=1 SV=1	[more]
O23507	1.0e-62	64.40	Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana OX=3702 GN=1MMP PE=1 SV=1	[more]
O04529	3.1e-51	55.14	Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana OX=3702 GN=2MMP PE=1 SV=1	[more]
Q5XF51	6.4e-49	52.69	Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana OX=3702 GN=3MMP PE=1 SV=1	[more]
Q9ZUJ5	1.0e-46	51.63	Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana OX=3702 GN=5MMP PE=1 SV=1	[more]

BLAST of Csor.00g108150 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6597028.1	5.63e-183	100.00	Metalloendoproteinase 4-MMP, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7028506.1	8.20e-176	91.85	Metalloendoproteinase 4-MMP, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
XP_022944853.1	1.57e-168	100.00	metalloendoproteinase 4-MMP-like [Cucurbita moschata]	[more]
XP_023539433.1	7.01e-165	98.28	metalloendoproteinase 4-MMP-like [Cucurbita pepo subsp. pepo]	[more]
XP_022974263.1	1.68e-161	95.71	metalloendoproteinase 4-MMP-like [Cucurbita maxima]	[more]

BLAST of Csor.00g108150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FZ72	7.61e-169	100.00	metalloendoproteinase 4-MMP-like OS=Cucurbita moschata OX=3662 GN=LOC111449256 P...	[more]
A0A6J1IFQ0	8.12e-162	95.71	metalloendoproteinase 4-MMP-like OS=Cucurbita maxima OX=3661 GN=LOC111472903 PE=...	[more]
A0A5D3DB58	4.53e-132	79.18	Metalloendoproteinase 4-MMP OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3AUH8	4.53e-132	79.18	metalloendoproteinase 4-MMP OS=Cucumis melo OX=3656 GN=LOC103483123 PE=4 SV=1	[more]
A0A6J1DB68	1.69e-129	80.51	metalloendoproteinase 4-MMP OS=Momordica charantia OX=3673 GN=LOC111018517 PE=4 ...	[more]

BLAST of Csor.00g108150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45040.1	1.7e-76	72.53	Matrixin family protein	[more]
AT4G16640.1	7.2e-64	64.40	Matrixin family protein	[more]
AT1G70170.1	2.2e-52	55.14	matrix metalloproteinase	[more]
AT1G24140.1	4.6e-50	52.69	Matrixin family protein	[more]
AT1G59970.1	7.3e-48	51.63	Matrixin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021190	Peptidase M10A	PRINTS	PR00138	MATRIXIN	coord: 119..147 score: 59.04 coord: 214..227 score: 58.8 coord: 95..110 score: 39.41 coord: 180..205 score: 55.77
IPR006026	Peptidase, metallopeptidase	SMART	SM00235	col_5	coord: 61..228 e-value: 4.4E-44 score: 162.4
IPR024079	Metallopeptidase, catalytic domain superfamily	GENE3D	3.40.390.10	Collagenase (Catalytic Domain)	coord: 31..233 e-value: 1.3E-55 score: 190.5
IPR001818	Peptidase M10, metallopeptidase	PFAM	PF00413	Peptidase_M10	coord: 68..227 e-value: 6.0E-48 score: 162.7
None	No IPR available	PANTHER	PTHR10201	MATRIX METALLOPROTEINASE	coord: 43..238
None	No IPR available	PANTHER	PTHR10201:SF245	METALLOENDOPROTEINASE 4-MMP	coord: 43..238
None	No IPR available	SUPERFAMILY	55486	Metalloproteases ("zincins"), catalytic domain	coord: 56..230
IPR033739	Peptidase M10A, catalytic domain	CDD	cd04278	ZnMc_MMP	coord: 64..227 e-value: 6.12979E-65 score: 197.427

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g108150.m01	Csor.00g108150.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030574	collagen catabolic process
biological_process	GO:0030198	extracellular matrix organization
biological_process	GO:0006508	proteolysis
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0031012	extracellular matrix
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0008237	metallopeptidase activity