Csor.00g107690 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g107690
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	rhomboid-like protein 20
Location	Csor_Chr06: 6981947 .. 6992969 (+)
RNA-Seq Expression	Csor.00g107690
Synteny	Csor.00g107690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACGGCGGCCCCTCTGGTTTCAGTGCGTCCCCTTCAATTTCTCTCCTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTGAGGCTTAACCACCCACTTTCTCCCTTTTCAATTTCTGTTCCACCTTGATTCATTTGCTCGTGTTCTTCTCTCTTTCGCAGACAATGCTCCTGTCACCCGGACCTTCATCATTGCCTCCGCCCTTTTCACCGTTTTCTTCGGGATCCAAGCCCGCTCTATTAAGCTTGGCTTGTCCTATCAGGTACTCTTCTCTCTCTTTCACTACCCAGATGCTTTTTCGCCAACTGTGGGTTGGTTTTATGTTCGAGACTAGGGTAGATTCGCTTCTTCGGTTAAGACGAGCCCTTTGCTTGGTTGAGTGTTTGACCTTCGATTCCGCGATGTATTGAGCATATACCCAGATTATAGATCGAACCGGCCGAGTTAATTGATGCATAATTGAAACTGCGGATCCTCTTTTCCTCATGTACCACCTTATGGGCCTCTGCAATTCTGGTTTTGAATTGTATCCATCTTTAAGTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTGTTGTTGTTGCTGCTGCTGCTGCTGGCTGAGGAGGGTGTAGCAGAAGTTGTCTCGTGGCTGGTTGTACGTTATGTGACTTGCCTATGAAATGTTTAGGTGTTCCTATCAGGGAGATAATCCAAGTTCAGTAACATTTCTGGAGCCTGTTAGATATAAATTTTTGGTAGACTAAATAGGGATTAGTTTTAATTTGTGAAAAGAAGGTAGACTTTGGTGCAGTCAGTTCCTAATTAAGTCATCTAATGAGATATTACATCATGTCCCTTCAATAAATCCCTAGAAAGAGGATCGTACTGACATGGGAAAAATAATTGTGAAGATTTTTGCATGAGCTTAGGAAATTTGGCACAGTGTTATTGTCATCAAATTCGGATGAAAGAGGCAGGTTATTTTGAAGTAAAAGAACATTAGTTGGTAACACCCATGGTCTTTCATCTTAAAGCTATGAACTAATTTTGTGAAATTTTTGGAATTAAGATGGTGGGACAATATTTGGTTGGAAGGGCTACTCTTGAATGACCCTTTTCCAATGTTATTCTCTGTTGCTATAAAAATTGGAGGTTGGATTAGGATTTTCAGGATTTGGAGACGAGAAACTGGAGATTGTACTCGGAGCTTAGAAGAATAGGAAGTAGCCGAATTTTCAAGGCTGATTAGAGAGGTTAAATGTGGAACAATTAAGAATAGCTCAAGACAATAGAGGTTAGTGCTATATGCTTCAAGGGAATTTTCAACAAGATCTATGCTATTTAAAATTTTAGTGGCAGAAACAATCTTGGCAGAGCATCTGATTAAAGGAAAAATGGCAAATATCCATATCCACATGTATCTATATATATATACACATTCATTTATGGGTATCCCTTTTTAAGCTATATTAATATATATTTATTATTATTATTATTATAGGAGTAAGGGTCTCACTATTGCTATATGTTTTAAGCTTCTTCACTATATGATGGGCTTTTTATACTATAAAGAGTAATGCCAAACAATTACTCAGTGGTCAGGTACTTCAGAGAAAGGAGGCAGTGATTCCATTTTAGGAGAAATTTGGTTGGAGAGAAATTAAGGATTTGTATTAGACATAAGAAAAGGTGATGAGAAGGTTTTAACACTTGTTGTTGGTGCTCTTTGTTAAGCTCCTTTTTTCAGATACCTAAACCCAAGTAGATGCATTAAAATGTGCCCGATCTCAAATATTCTCCCATGATTTGTCAATTTCTGACGAGGTTCTTCTGTTTTTTTCAATCTAATATTTTACAAGATTGAAAAAACTAGCTTGCCAGAGTAACAACTTCATCCCTAAACAAAGGACTCAATATAGCTTCTTCTATCATTCCATGAAAACGTGAAATAAAAAACATAGACATGCTAGCAATCTTCCATAATCGAGACCACAACATGGTAGCAAAAGGGCATAGCAAGTATAATTATCTGTAGCCCCCTGCTCAAATGACAACAATTGAGGAAGGACAATACAAAATGGTGTGGCTAAAAAAGGTAACAATTCTTTCTGAAGTGTCTGGAAAAGAGCCATTTTTTTTTGTGGGATTGTAATCTTTTGATTTTGAGAAGAAGTTAAGAGAAGAAAGGACTGGAGCATGGAGTAAAAAAAACTAAATGATTGTTCTAATACTTGCAAGTTTATAACTACAAGGAGAAAGTCCATACATTACTATGTTTGTGTTTTACACTTTTATCCTTTTTTCTTCTGATATCATAATTTTGGGGCTAAGGAATGAGAAAGACCTTTCCCTTGCATCATGATTTCAATTTCATTTCATTCGAAAAGATCCAAGTTTGTCTCAACAATGTTTTTGTTATTCCAATCGTGTTCCATTAAATAGGAACAATCAAGCTGATAAAATTTGATAACTCTCCGATGGAGAATTAGAACGAAAAATCCATTAGATGACAAATTTTGGTTCTAAGGCATCTCAGGCAGTGAATCAAATCCATGGTGCAAGGTTTTCTTATTAACATGCAATATTGATTTAGAAAAGTGAAGTGGAAATTGGAATTTTTTTATTTTTCTATAAACCAATATTTTTTCATAATTTTTTTTGTGTTGATAAGAAACAAGATATGATGTGTGGGAGGAAAGAAATATTTTCATGCACGATATGAAAATGTTATGAAAAATGGGAGGAGAGCCAGGCACGAAACTTCCTGTTGCCCATGGGAACGTTGAGGCTAGTGTAAAGGGAGGTACACCAAAAAAGAGCCAAGAAAAGAGAACCAGATTTAAAAAACAATCAAAAGTCTCTTAGGAATCAGTATCATTGTTCCTTTTTGGCCAATTCCTCCTATGAATAAAAGGACCTACCTTGAAAGAGTCTAGATATATGTAACCACAAAAGAAGAATTACAGCCAAAAAGGCCAGAGAAAAGAGGGAGGAAGCTTCTATCTCCGTCAATATAAGTTGTTCAAAAGATTACTATATTACAAACTATTTAGGATAGGCACTCCACTTCAAGCCCTATGCTGTATATTTCGACTCAATGTAATTTTTTTTTGTAGCATCTTTATAAATCCTGTCGGTTCTTTCCAACCCAAAATTTGAATCCAAACCTTTAGAAATGAATACTGAAACAAGGAGCTGCCTTTGTTCCTATATTGCTGTGGGTCTGTGAAGGATTTCTACAATAGAAGTTTTAGATGAATGCTCTTTTATTACTTGGTGGTTACGGGTTTAACTTGAAAGGGAAAGAAGTTGGAACTAGTTTACTTGCTTGTAAGATTGGAAATGGGAGGTTCTTTGTACAGGAACCAGTATTTTATGAAATTCTTTATAAGATTCTAATATAATGAAGTCGCAGAGGTAGGAAGTTTTTGTTTAAAAGTTTGGACGGGACATGAATTTGAATAAGCTGCGCTAAAGGGATCCACTGGTAGAAATATTATTTTTATCATTTTAACTGCTGCTATTCCATCTTTGTTGCATATATAATCCTATTATATCGGACTTAAAGTCGACTTATTTTATCCTTTTTCCATGATAGAGATTACCTTAATTTGTGTGGTAGAAAGGACACTTTTGACTAGTTAATTGTAATCCTTATGGCAGGATGTGATTGTGAAGCTTCGCTTTTGGAAGCTAGTGATGTCAGTCTTTGCCTTTTCATCTACTCCTGAATTGTTGTTCGGACTGTTTTTGCTTTATTACTTCAGAGTATTTGAGAGACAGATAGGCTCCAACAAATATTCGGTAAGTTTTATTCAATTCATACTGCAGGATTTTATTAAAACATGTCATAATGAAGCAACCAATCACGATCTTTAAATTGATGGGTCACATTAATATAATGCAGTGCCTGATTATTAACTCTTGTAACCATGTAGTTGTTTATCTTCAATGAATAGAAGCATAAAAAATCAGAAAGTGTATAAAAGTAGATGTAGTATAAGTTTTGTGGTCATACATGTGATGCCGTATTCATTAGGAATACTGAAAATGGTATTGAATTAATACTATGCCCCTTCTGATAACATACTAATCTTCCTAACATATCCATTACTTGTACTGACAACATTTTTGTGGTCATTGACGTGACAAAGTGGGCACCTATATTTGAAATAGTTTATTGTTTTTCATTTCAATTTGCTTCATAGAATAAGGTTAGCAGACTGAATTTAGTACGATCATTGCCTATAGTTTCTATTCTAGAAAACAGATACGTTTGGGTCAGGAAGTGTGAGTCATGCTTGCCTGCTAATATTGACGGCGATAATTTGTTAATTATAACATTCTTCACTCCAATTGTCAAACATATTATGTTGTAGTTTTTGTGCTCAAAACTCTTTTTCCCCCTTTAGTTGATGTGTATTTCTCCGTAAAGAGATTTATGTTAATATTCTGTCGTTTTGCAGGTCTTTACCTTGTTCTCTATAATAATCTCCCTACTTTTTGAGGTCCTTGCAATATCATTACTTAAAGGTATGCATTTTGGTTTAATCTACTAATATGCTTGGGCAGCTAGCACAATTCAAGCTCATGTTTGATTATTGGTTTGATGTTGTTTAACATCCCTTTCTTTTTAAATTTTTAGAGGTGAACTCTCCTTCTTTCCCTTCTTTTTCTCCTGTAAAATTTGTTAACTTGGATTGGAAGTCCTTCCTGATCTTTCTGGCATTTTCGCTTGTAAGCCTTTGTATACCCATCTAGTTTCTTCTCTCTCTACTTATCTCTTCAGAAACCTTTGAAAGTTGATAATCCGAGTGAAATTCCATTTTTTTTCCCTGATTGATGGCTTTAGGAAGAATTAACACCTTGGATTTCATCCAGAGAACCCATTACTTTGTCCTTGGCCCCAATTGGTGCTTTATGTGCAAGGGGCCTTGAGAAGATTTTTAACCGTTTGTTATGGCTTTGTTTGTTTGATTCTCTGTTGTGGAGTCAGTTTTGGCATATTTTTGGTTCCTACCTGAACATCTGTATGATGGTGGTGCGACATTTGATCCTCAATTTTGGGATAAAGACTTATTGCAAGCTTGCTTTTGTGTTGGTCTTTGAAGTATTTGGTTTGAAGGAAACAGGAGAGCCTTCATGGTTTTAGAACAGTTCCTTCCTAGACATCTTCTGACCATTCCTCTTAAGATATCCTAATTCTACGAGTCTTGAATCAAACAGCCACTTAAATTTGAGAGCTAGATGGAGATGGTGAGGTAGATCTTTGATTGTTATAGGAGTTTTTACAATCGGAGGGAGAGAAGGGCTAGGTTTTGTTTTTGTTTTGTTTGTTTTTATTTCAAGGGTTGAGTAGTCACTTAATCCTTCTATAATTTTTGGTATTTTCATTCATATCTCAACTATACAAAATATCATAATAAATACAAGGTACAGCAACTTATAAAAGAATGAATATTTTACCATAAACCAAATCTTAAAACATACCTAGAAAAAAAAAATACAAAATAAAGATGAGATAAAATCCTAAAATACGAGAAACAAGGTTACCCTTAACTTTGACCATAATTTACAACACTCCCCCTCAAGGTGGATTGAATATATTATACAATCCCAACTTGCTATTCAAATCTTCAAGGTTAGGTCATGGTAAAAGCTTGGTAATCATATCTGCTAATTGCTGCTTGAGAATGGATGTGGACAAAGACACTACACTCAAAAACTCTAGGGACCAAATCAAGAGATTGAACACAAAGATGAGGAAATGATTGAAGACTTAATGAGGAGCAAGTATGTGGGATTGATCAATTGTGTGGAAATGAGATGACGATTCTTGCATTAAGCCACTCCATTTTGTTGATGAGTATCAACACAAATGCCAAGATGCAGAATTCCTTGAGTGATAGGTAATCCTCAAGACATGAACTAAAGAATTCTTTTGCATTGTCTATTGTGAGGACACAAAATTTGGTTTGATGTTGAGCTTTTGATCATATTAGGAAAATGTTTGAAATGTTGGTGAGCTTAAGATTTTTTTTCTTAACAAAGATCCATGTAACATAGATCATCAACAAAGGAAATAAGCTGTCGAGCCACAAAGATTTTTTTTTTGAAGGGTCCCATACATTGCTATCAATAAATGAAAAAGGACTTGACGGTTAATAAGCAATGTATGGATAGGGGTTTCAAGTATGCATGATAATCTGAAAAATTCCACAATTGAACAATGTAAGATTTTTATTATGAAGAAGATTTTGAAACAATTTGGAGAAATATGAAAAATTTGGATGACCTAACTGATAGTGTAATAACATCATTTCACGATCTTTATTGAAACAAGAAGAAAACTGATTACTGGACACAAAGGAAGATAAAAACTAAGAATTGTCTCCAATTGCTAGTGAGCCTTGATCATAGTTGAGAGTATGAAGTCTGAAAAAGTTCAGCACTGCCAATTGTCTTCTCCAGTTCGAATTCTGCAAAAATACATTAGTTTGGATTAAACTTAATCGCACATTTAAGATCACGTGTCAATTTACTTATTGAAAGTAAATTACAACCCAAGTTTAGCATATGTTATACAGAGTTAAGATATAAATTTTGAGTAACTCTAATGGAACTTGTTCCAACCACTTTGGAGTTTGACCCATTTGCAATTTTCACAAGGAATTGGAGGTGCCGACTTGATAGTTTTGAAATAGTGATGCATTCCTTGTCATATGATGTGATGCTCCAGTGTCTACAATTCAATTCCTTCCTTTACTAGTTAACAAAGCAGGAGGTATAACTTCCTGTGCAGCCAGTATTGCTCCCTGGCCAATGATCTTTTGTTTTGCATCTATTTGTTATTTGCTAAATGGTGTTGACTTCGAATTGTTAGAATTATACGGAGCTACGTTAACCACATAGGCCCTACCATCATGATCATTGTGATGCCTAGGTTTCCAATTAGCAGGCTTCCCATGGATCTTTTAGCATGTGTCTTTTATATTACCCACCGTTTTGCAATTCTCACACCGAGGCCTCAATTGTTTTAGCTTTTTGTCACTTTGTACCATTGAGTTAAAACTACACTAGCAAGTACAAATGCTATCAAGAAAGTAGAGACTGATTCTGATTTGCCCATTATTGCACATTTCCTACATTCTTCTCGCCTTACTTCAGAGAAGGCTTTGCGAAGAGTTTGGCAATGACTTGGTTCCCATGTTTCGACCTCGAACTTCATCAAGATCGTTGATAAGGCCAAGAAGGAATTTGAGTGTCTCTTTTTCCTCAAGAATTTCTGTTTATTGAGTCGTATCATTGGTGGCATACTTCCATGAATAGACTTCAAATAAATCCACTTTTTTCCAATGATAGGAGTATTAAAGTAATCAGTAACAAATTGATAACCTCAGCAAAAATCATGAAGGATTGTTTCTATCCTAAACAATTCTGAAGTGTTCTTCTTACTAGAGTATGTTTCCTTGAGATTGTCCCAAATTTGATGTGTTGTTCCGTACAGAAGAAAATTTTCACTTATCTCATTGGTTGTGTAATTAATTAACAACGACATGACCATGTTATTTTCTACTTTCCACTTCATGAATTCGGGATTAGTTGCTTTAGGCTGCACAATCTCTTTCGAGAAGTACTCATTCTTACCCTTGCCACATATGAACATTAAGACTGACTATGACCATTGGATATAATGGGCCATTCAATGTGTGACCCATAATATGGGCAAATGATGATGAATCATATCCTCCTTGACCATTAGAGATTGGTTCGATTGATTTGGAAGAATACATACTCATGAAAAAATTGGACAAAATGTAGAAGTGAAGAACTAGGTCAAAAAGAAAAAATTGCAGCAATTAGGTCGGCAACAGTCTTTGGCGATAAGCAGTGACGATGTCAGAGGAGTCGAACGTTAGTGATGGAGGAGTCAGCGTCGGAGGAGGGTGCTTCAGTCGCGAGTTGGTATCGAATGTGGGTGGTAGTCATGAGAAGCTCACGATTTTTCTATTTGAGTGTTAAAGGGGAGGAGAACACTGCAAAGGGATCGTCAGAAACAAGGACTATTGACCATTAACCTTCTGTGGTAGTCTGATTAGTTGGAAAAGCCTTTTGGCCTTTGCATGAATGGTTTTATTGGTGAATTTATAAAGGTTAATAGGAGGTGGTTGAATAAGTTATTGTAGCATATTTCTTGAATTTGAAAACAGATGTTAAAGCTGACGTTAGCACCTCATTCCTTGGAAAACTGATTTCATCTAGATTAGGAACTTTATTGCTTTTTTAGCCTTTACAGTCATACAAAGATTGAATATTCTATCATGGGTTGCTCCCGAACAAAGTTTCGATGACTTGTTTCAGCTTATCTATAGTGCCTTCGTTGTTGGTTTGTCCAAAATGTTATAGTTCAATCCGGTGGCTGCTTTTGTTTGGAAATTATTATTATGTATTGAGTATATATATATATAATAAATTTTTAAAAAATTGAGGTCAAGGTTATGATTGAACTTGTGCTTGGTTCGGGATGGAGAGATGAAATACACAATAACTAAGAAATTTCAAGATCGGGACTAGATGTAATAGCATAGATAATAAAATTATGTAATTATAGTTGAAGAAAATTCAAGATCGGTACTAGATGTAGACTAGATAATAAAGTTTATGTAATTATAATTTAAAAAAATTGGTTGCAGTTTGGTTTTGATCTAGATGAAAGTAGATATGTACTAAAAATATGTAATAAGATTTATAAAATATGGAGTTGGGGCTACAGCTGAGATGTGGATGAAGACGTGAAATACATAATAAGAATAATAATTTCCTTTATAAAAAACATAAAAACGAAGGATTGAGGTTGGATTTGATGCTGGAATGGAGTTCATCGGGATGAGGTTTAGACAGTGGAATACATAATAAAAGTTTTAAGAATGAGGCCACAGTTGGGGAACTGAGAGAGAAAATGAGATGTGGGGAAGGGGGATAAGATCTTCATTTGGTTGGTATCTGGTTTTAACTCTCATCATTTTCTCATTGGACATAAGTTACGTCAGCAATTTTGCAATAGAAGCTTTATTATTGATTTTATCCCAACTTGTTAACATTGGAGTTCATTCTTGTTGCATCTTACATTCAGAAGAAATTTTATCAATTCATTTTTTCTTTTTCTTTCACAGATTTTAGCATTAGAATCTTAGGGAGAATATATATTTTAGCATTAGCAGTAAGTTCTAATGATTTTGACTTGGCTAACACTTTTCTTTTCTTTTTTTCTTTTTTTGGGGGCAGATCCTGCAGCCACTGCTGCCAATCTAGTCACTTCTGGACCTTATGGTCTTTTATTTGCTTCCTTTGTACCCTTCTTCTTTGATATTCCTGTTTCAACTCGGTTTCGTGTATTTGGAGTTCGTTTCTCTGACAAGTCTTTCATATATCTTGCTGGTATTCAGGTTAGGAGTTTGCTTTATTTATATTTTTTTTCTGATACCTCTTTCGTTTCTCTAGCTGTATAATCTAGTTTGTTGTTGATCTTGCAGCTCCTTCTGTCCTCGTGGAGAAGATCCATCTTACCAGGGATATGCGGCATTCTTGCTGGTTCCTTATATCGTTTGAATGTATTTGGCATCCGCAAAGCCAAGGTTAAATTCAAAATTTGCATAAACACATTGCTTCCTTCGTTTTCTATCTGAAATTATGATTCTGGTATATTAAATTGTAGTTGGGGCTTTTCAGTATTTGGTTAAACTGTGGAAATTAAACTCAGGATAGGTGATTTATAGCCCTTCAACCTTTATTAGTTTAGAAGGGATGAATTATGAATATTTTGATACCTTTTCTCTCTGCGGCACCATTTCACTGCATGCATATACAGGACTCTTTATGCAGAATTTGAGTTAAAATCTTCATTTGAGTTTTTGATTAGGTAATTACCATCAGCCTCCAGGTTGTCTCCCAACAATAATGCTCCTATTCTTAACATTTTGAATGGAATTGGTACACCTTAGATGCTTCCGACTTGCTCAAGGACCCAACTGCTCTAAAATTGTGTCTTATCTTCACTATTCTGGTTGGTTATGGACCAGACCATTTGGCTTGGCTTCATCTATCTTCAAATAATATAAGAGGCGTTTCATATGCGAAGAAAAAAAAAATGAATGATAGGATCTGTCTTTCGTGCTCAACTTGTCTGATTACTTCTACAAGTCTCGTCCTCTTAAAGCCTCGTATATATCGACAGACTTACAAGATCTTCTATAGTATTCTGATGTTAGAAACTTTGATCTTTTGTATGATGATTTCATTCTTTTAATTGTTTCTGTTAATTTTGAGTCAGTTTGATGAAGGTTCTCTTATTTTTCTATCATTAGGTAATTTGTAATTTTCTAAAGAATGTTATTGTATTATTTTCATGCTTCACAGTTTCCGGAGTTCATCAGTTCATTTTTTTCGCGATTTTGTTTGCCATCTGTGGGGAATCCTCCAGCAGCCCCAAATAGAGATGTTAGAGGAAATATGCCATCATTCATGAGCCGCCAGGTTGAGGTTAGTACATTTGGCGAATGCTTCTATCAGCTATTAGTTTCAACACATATTTTGATAAGCTACACCATTTGAGGAAGAGATTTTGACTATTTAATAGATTTCTCGTCTGCTGACCAACTTTTAGGCATGAGACTGTGCCATCGTAATTGTGAGATTGTGGGTACTTGCTAACGTTATAGTCCTTAAAATAATCTATTTGGATGTAGTTAACGAGTACATGGGTGGTGGCATGAAAAACGCAAGTTTTGCACTTCAGCCTCTTAACTGGTTTATTTTGTGTTGTGCTATTATAGAGGAACTTCACTCCTGTGCCAACTGCCTCAGAACCACCGGAGGACTCCATTGCTACCCTTGTTTCGATGGGCTTTGACAGAAATTCAGCCAGGCAGGCACTTATGCGGGCCAGAAATGATGTTAACATGGCAACCAACATCCTTCTTGAATCACAATCGCACTAA

mRNA sequence

ATGAACGGCGGCCCCTCTGGTTTCAACAATGCTCCTGTCACCCGGACCTTCATCATTGCCTCCGCCCTTTTCACCGTTTTCTTCGGGATCCAAGCCCGCTCTATTAAGCTTGGCTTGTCCTATCAGGATGTGATTGTGAAGCTTCGCTTTTGGAAGCTAGTGATGTCAGTCTTTGCCTTTTCATCTACTCCTGAATTGTTGTTCGGACTGTTTTTGCTTTATTACTTCAGAGTATTTGAGAGACAGATAGGCTCCAACAAATATTCGGTCTTTACCTTGTTCTCTATAATAATCTCCCTACTTTTTGAGGTCCTTGCAATATCATTACTTAAAGATCCTGCAGCCACTGCTGCCAATCTAGTCACTTCTGGACCTTATGGTCTTTTATTTGCTTCCTTTGTACCCTTCTTCTTTGATATTCCTGTTTCAACTCGGTTTCGTGTATTTGGAGTTCGTTTCTCTGACAAGTCTTTCATATATCTTGCTGGTATTCAGCTCCTTCTGTCCTCGTGGAGAAGATCCATCTTACCAGGGATATGCGGCATTCTTGCTGGTTCCTTATATCGTTTGAATGTATTTGGCATCCGCAAAGCCAAGTTTCCGGAGTTCATCAGTTCATTTTTTTCGCGATTTTGTTTGCCATCTGTGGGGAATCCTCCAGCAGCCCCAAATAGAGATGTTAGAGGAAATATGCCATCATTCATGAGCCGCCAGGTTGAGAGGAACTTCACTCCTGTGCCAACTGCCTCAGAACCACCGGAGGACTCCATTGCTACCCTTGTTTCGATGGGCTTTGACAGAAATTCAGCCAGGCAGGCACTTATGCGGGCCAGAAATGATGTTAACATGGCAACCAACATCCTTCTTGAATCACAATCGCACTAA

Coding sequence (CDS)

ATGAACGGCGGCCCCTCTGGTTTCAACAATGCTCCTGTCACCCGGACCTTCATCATTGCCTCCGCCCTTTTCACCGTTTTCTTCGGGATCCAAGCCCGCTCTATTAAGCTTGGCTTGTCCTATCAGGATGTGATTGTGAAGCTTCGCTTTTGGAAGCTAGTGATGTCAGTCTTTGCCTTTTCATCTACTCCTGAATTGTTGTTCGGACTGTTTTTGCTTTATTACTTCAGAGTATTTGAGAGACAGATAGGCTCCAACAAATATTCGGTCTTTACCTTGTTCTCTATAATAATCTCCCTACTTTTTGAGGTCCTTGCAATATCATTACTTAAAGATCCTGCAGCCACTGCTGCCAATCTAGTCACTTCTGGACCTTATGGTCTTTTATTTGCTTCCTTTGTACCCTTCTTCTTTGATATTCCTGTTTCAACTCGGTTTCGTGTATTTGGAGTTCGTTTCTCTGACAAGTCTTTCATATATCTTGCTGGTATTCAGCTCCTTCTGTCCTCGTGGAGAAGATCCATCTTACCAGGGATATGCGGCATTCTTGCTGGTTCCTTATATCGTTTGAATGTATTTGGCATCCGCAAAGCCAAGTTTCCGGAGTTCATCAGTTCATTTTTTTCGCGATTTTGTTTGCCATCTGTGGGGAATCCTCCAGCAGCCCCAAATAGAGATGTTAGAGGAAATATGCCATCATTCATGAGCCGCCAGGTTGAGAGGAACTTCACTCCTGTGCCAACTGCCTCAGAACCACCGGAGGACTCCATTGCTACCCTTGTTTCGATGGGCTTTGACAGAAATTCAGCCAGGCAGGCACTTATGCGGGCCAGAAATGATGTTAACATGGCAACCAACATCCTTCTTGAATCACAATCGCACTAA

Protein sequence

MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFWKLVMSVFAFSSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAANLVTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGIQLLLSSWRRSILPGICGILAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVERNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH

Homology

[Close]

BLAST of Csor.00g107690 vs. ExPASy Swiss-Prot
Match: Q9LET3 (Rhomboid-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=RBL20 PE=2 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 1.5e-118
Identity = 218/296 (73.65%), Postives = 252/296 (85.14%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFWKLVMSVFAF 60
           MNGGPSGF+NAPVT+ F+I SALFTVFFGIQ RS KLGLSYQD+  K R WKL+MS FAF
Sbjct: 1   MNGGPSGFHNAPVTKAFVITSALFTVFFGIQGRSSKLGLSYQDIFEKFRIWKLIMSTFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAANL 120
           SSTPEL+FGL+LLYYFRVFERQIGSNKYSVF LFS  +SLL EV+ +SLLKD   T ANL
Sbjct: 61  SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSGTVSLLLEVILLSLLKD---TTANL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGIQLLLSSWRRSILPGIC 180
           +TSGPYGL+FASF+PF+ DIPVSTRFRVFGV FSDKSFIYLAG+QLLLSSW+RSI PGIC
Sbjct: 121 LTSGPYGLIFASFIPFYLDIPVSTRFRVFGVNFSDKSFIYLAGVQLLLSSWKRSIFPGIC 180

Query: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGN-PPAAPNRDVRGNMPSFMSRQV 240
           GI+AGSLYRLN+ GIRKAKFPEF++SFFSR   PS GN PP AP+R++ G +     R+ 
Sbjct: 181 GIIAGSLYRLNILGIRKAKFPEFVASFFSRLSFPSFGNSPPPAPSRNIVGTISPNTGRRA 240

Query: 241 ERNF-TPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 295
           ER+   P+P++ EP E++I TLVSMGFDRN+ARQAL+ ARNDVN ATNILLE+QSH
Sbjct: 241 ERSQPAPLPSSVEPSEEAITTLVSMGFDRNAARQALVHARNDVNAATNILLEAQSH 293

[Close]

BLAST of Csor.00g107690 vs. ExPASy Swiss-Prot
Match: Q8RXQ2 (Rhomboid-like protein 18 OS=Arabidopsis thaliana OX=3702 GN=RBL18 PE=2 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 5.1e-106
Identity = 199/294 (67.69%), Postives = 235/294 (79.93%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFWKLVMSVFAF 60
           MNGGPSGFNNAPVT+ F+IA+ALFTVFFGI+  S KLGLSYQD+  K R WKL++S FAF
Sbjct: 1   MNGGPSGFNNAPVTKAFVIATALFTVFFGIRGGSSKLGLSYQDIFEKFRIWKLIISAFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAANL 120
           SST +LL GL+LLY+FRVFERQIGSNKYSVF  FS  +SL+ E + +SL KDP    ANL
Sbjct: 61  SSTTQLLSGLYLLYFFRVFERQIGSNKYSVFIFFSGFVSLILETILLSLTKDP---TANL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGIQLLLSSWRRSILPGIC 180
           +TSGPY L+FASFVPFF DIPV+ RF V GV FSDKSFIYLAG+QLLLSSW+RSI  GIC
Sbjct: 121 LTSGPYALVFASFVPFFLDIPVTKRFGVLGVHFSDKSFIYLAGVQLLLSSWKRSIFTGIC 180

Query: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GI+AGSLYRLN+FGIRKAKFPEF++S FSRF LPS+ +    P R      P+   + V 
Sbjct: 181 GIIAGSLYRLNIFGIRKAKFPEFMASLFSRFSLPSLSSHSQPPRR----TSPNLGRQAVR 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 295
               P+P+ +EP E++IATLVSMGFD+N+ARQAL+ ARNDVN ATNILLE+ SH
Sbjct: 241 AYRAPMPSTTEPSEEAIATLVSMGFDQNAARQALVHARNDVNAATNILLEAHSH 287

[Close]

BLAST of Csor.00g107690 vs. ExPASy Swiss-Prot
Match: Q5ZJQ8 (Ubiquitin-associated domain-containing protein 2 OS=Gallus gallus OX=9031 GN=UBAC2 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 4.8e-19
Identity = 85/341 (24.93%), Postives = 150/341 (43.99%), Query Frame = 0


Query: 4   GPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVK--LRFWKLVMSVFAFS 63
           G +G   AP++++ ++  +  ++   +  +  +   +Y    +K   + W+LV       
Sbjct: 6   GSNGLYKAPLSKSLLLVPSAISILLTLLFQHYQKFFAYNLQAIKEDFQIWRLVCGRVICL 65

Query: 64  STPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAANLV 123
              +      L+Y FR+FER+ GS K+S F L +  +S LF++L +   +       N +
Sbjct: 66  DLKDTFCSSLLIYNFRIFERRYGSRKFSSFLLGAWTLSALFDLLLVEAAQYVFGITINSL 125

Query: 124 TSGPYGLLFASFVPFFFDIPVSTRFRVFG-VRFSDKSFIYLAGIQLLLSSWRRSILPGIC 183
            SG  G +FA FVPF+  IP     +V G    ++K+ +Y+ G+QLL S     IL  + 
Sbjct: 126 PSGFLGPVFALFVPFYCSIPRVQVTQVLGYFSITNKTLVYILGLQLLTSGSYIWIL-ALS 185

Query: 184 GILAGSLYRLNVFGIRKAK-FPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPS------ 243
           G+++G  Y  ++  + +    P +++  FS    P   +  A P  ++R  M +      
Sbjct: 186 GLISGICYNSSILKVHRILCVPSWVAKIFSWTLEPIFSS--AEPTNEIRVGMGATVDIQR 245

Query: 244 -----FMSRQV---------------------ERNFTPV------------------PTA 291
                 + RQ+                      R F P+                  P  
Sbjct: 246 QQRMELLDRQIMMSQVAQMRRQRQQQGGMINWNRLFPPLRHRHNENYQDHHPSDQDTPPP 305

[Close]

BLAST of Csor.00g107690 vs. ExPASy Swiss-Prot
Match: Q4R910 (Ubiquitin-associated domain-containing protein 2 OS=Macaca fascicularis OX=9541 GN=UBAC2 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.4e-17
Identity = 87/345 (25.22%), Postives = 150/345 (43.48%), Query Frame = 0


Query: 4   GPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVK--LRFWKLVMSVFAFS 63
           G SG   AP++++ ++  +  ++   +     +    Y    VK   + W+L+       
Sbjct: 6   GSSGLYKAPLSKSLLLVPSALSLLLALLLPHCQKLFVYDLHAVKNDFQIWRLICGRIICL 65

Query: 64  STPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLK-DPAATAANL 123
              +      L+Y FR+FER+ GS K++ F L S ++S LF+ L +  ++     TAA+ 
Sbjct: 66  DLKDTFCSSLLIYNFRIFERRYGSRKFASFLLGSWVLSALFDFLLVEAMQYFFGITAASN 125

Query: 124 VTSGPYGLLFASFVPFFFDIPVSTRFRVFG-VRFSDKSFIYLAGIQLLLSS---WRRSIL 183
           + SG    +FA FVPF+  IP     ++ G +  ++K+ IY+ G+QL  S    W    +
Sbjct: 126 LPSGFLAPVFALFVPFYCSIPRVQVAQILGPLSITNKTLIYILGLQLFTSGSYIW----I 185

Query: 184 PGICGILAGSLYRLNVFGIRKAK-FPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPS-- 243
             I G+++G  Y   +F + +    P +++ FFS    P   +  + P  + R  M +  
Sbjct: 186 VAISGLMSGLCYNSKMFQVHQVLCIPSWMAKFFSWTLEPIFSS--SEPTSEARIGMGATL 245

Query: 244 ---------FMSRQV---------------------ERNFTPV----------------- 291
                     + RQ+                      R F P+                 
Sbjct: 246 DIQRQQRMELLDRQLMFSQFAQGRRQRQQQGGMINWNRLFPPLRQRQNVNYQGGRQSEPA 305

[Close]

BLAST of Csor.00g107690 vs. ExPASy Swiss-Prot
Match: Q8NBM4 (Ubiquitin-associated domain-containing protein 2 OS=Homo sapiens OX=9606 GN=UBAC2 PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 7.6e-17
Identity = 87/342 (25.44%), Postives = 148/342 (43.27%), Query Frame = 0


Query: 4   GPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVK--LRFWKLVMSVFAFS 63
           G SG   AP++++ ++  +  ++   +     +    Y    VK   + W+L+       
Sbjct: 6   GSSGLYKAPLSKSLLLVPSALSLLLALLLPHCQKLFVYDLHAVKNDFQIWRLICGRIICL 65

Query: 64  STPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLK-DPAATAANL 123
              +      L+Y FR+FER+ GS K++ F L S ++S LF+ L I  ++     TAA+ 
Sbjct: 66  DLKDTFCSSLLIYNFRIFERRYGSRKFASFLLGSWVLSALFDFLLIEAMQYFFGITAASN 125

Query: 124 VTSGPYGLLFASFVPFFFDIPVSTRFRVFG-VRFSDKSFIYLAGIQLLLSS---WRRSIL 183
           + SG    +FA FVPF+  IP     ++ G +  ++K+ IY+ G+QL  S    W    +
Sbjct: 126 LPSGFLAPVFALFVPFYCSIPRVQVAQILGPLSITNKTLIYILGLQLFTSGSYIW----I 185

Query: 184 PGICGILAGSLYRLNVFGIRKAK-FPEFISSFFSRFCLP--SVGNPPAAP---------- 243
             I G+++G  Y   +F + +    P +++ FFS    P  S   P +            
Sbjct: 186 VAISGLMSGLCYDSKMFQVHQVLCIPSWMAKFFSWTLEPIFSSSEPTSEARIGMGATLDI 245

Query: 244 -----------------------NRDVRGNMPSF------------MSRQVERNFTPVPT 291
                                   R  +G M ++            ++ Q  R   P   
Sbjct: 246 QRQQRMELLDRQLMFSQFAQGRRQRQQQGGMINWNRLFPPLRQRQNVNYQGGRQSEPAAP 305

[Close]

BLAST of Csor.00g107690 vs. NCBI nr
Match: KAG6596983.1 (Rhomboid-like protein 20, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 572 bits (1473), Expect = 2.60e-205
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFWKLVMSVFAF 60
           MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFWKLVMSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFWKLVMSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAANL 120
           SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAANL
Sbjct: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAANL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGIQLLLSSWRRSILPGIC 180
           VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGIQLLLSSWRRSILPGIC
Sbjct: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGIQLLLSSWRRSILPGIC 180

Query: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE
Sbjct: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 294
           RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH
Sbjct: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 294

[Close]

BLAST of Csor.00g107690 vs. NCBI nr
Match: XP_022936013.1 (rhomboid-like protein 20 [Cucurbita moschata])

HSP 1 Score: 571 bits (1471), Expect = 5.24e-205
Identity = 293/294 (99.66%), Postives = 294/294 (100.00%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFWKLVMSVFAF 60
           MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFWKLVMSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFWKLVMSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAANL 120
           SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAANL
Sbjct: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAANL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGIQLLLSSWRRSILPGIC 180
           VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAG+QLLLSSWRRSILPGIC
Sbjct: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180

Query: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE
Sbjct: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 294
           RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH
Sbjct: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 294

[Close]

BLAST of Csor.00g107690 vs. NCBI nr
Match: XP_023539609.1 (rhomboid-like protein 20 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 568 bits (1464), Expect = 6.11e-204
Identity = 291/294 (98.98%), Postives = 293/294 (99.66%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFWKLVMSVFAF 60
           MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFWKLVMSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFWKLVMSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAANL 120
           SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAI+LLKDPAATAANL
Sbjct: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAITLLKDPAATAANL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGIQLLLSSWRRSILPGIC 180
           VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAG+QLLLSSWRRSILPGIC
Sbjct: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180

Query: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGNPP APNRDVRGNMPSFMSRQVE
Sbjct: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGNPPGAPNRDVRGNMPSFMSRQVE 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 294
           RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH
Sbjct: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 294

[Close]

BLAST of Csor.00g107690 vs. NCBI nr
Match: XP_022974301.1 (rhomboid-like protein 20 [Cucurbita maxima])

HSP 1 Score: 558 bits (1437), Expect = 7.98e-200
Identity = 288/294 (97.96%), Postives = 290/294 (98.64%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFWKLVMSVFAF 60
           M+GGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRF KLVMSVFAF
Sbjct: 1   MSGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAANL 120
           SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATA NL
Sbjct: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGIQLLLSSWRRSILPGIC 180
           VTSGPYGLLFASFVPFFFDIPVSTRFRV GVRFSDKSFIYLAG+QLLLSSWRRSILPGIC
Sbjct: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180

Query: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNV GIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE
Sbjct: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 294
           RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH
Sbjct: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 294

[Close]

BLAST of Csor.00g107690 vs. NCBI nr
Match: XP_008464944.1 (PREDICTED: rhomboid-like protein 20 [Cucumis melo] >KAA0057225.1 rhomboid-like protein 20 [Cucumis melo var. makuwa] >TYK18737.1 rhomboid-like protein 20 [Cucumis melo var. makuwa])

HSP 1 Score: 526 bits (1356), Expect = 1.58e-187
Identity = 271/294 (92.18%), Postives = 281/294 (95.58%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFWKLVMSVFAF 60
           MNGGPSGFNNAPVTRTFIIASALFT+FFGIQ RSIKLGLSYQDVIVKLRFWKLVMSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAANL 120
           SSTPEL+FGLFLLYYFRVFERQIGSNKYSVF LFSII SLLFEVLAISLLKDPAA   NL
Sbjct: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAA---NL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGIQLLLSSWRRSILPGIC 180
           VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAG+QLLLSSWRRSILPGIC
Sbjct: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180

Query: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNVFGIRKAKFPEFISSFFSR  LPS GNPPAAPNRDVRGNMPSFMSR VE
Sbjct: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRPVE 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 294
           RN+   P+A+EPPED+IATLVSMGFDRNSARQAL++ARNDVN+ATNILLESQSH
Sbjct: 241 RNYPSAPSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 291

[Close]

BLAST of Csor.00g107690 vs. ExPASy TrEMBL
Match: A0A6J1FC34 (rhomboid-like protein 20 OS=Cucurbita moschata OX=3662 GN=LOC111442736 PE=4 SV=1)

HSP 1 Score: 571 bits (1471), Expect = 2.54e-205
Identity = 293/294 (99.66%), Postives = 294/294 (100.00%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFWKLVMSVFAF 60
           MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFWKLVMSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFWKLVMSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAANL 120
           SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAANL
Sbjct: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAANL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGIQLLLSSWRRSILPGIC 180
           VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAG+QLLLSSWRRSILPGIC
Sbjct: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180

Query: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE
Sbjct: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 294
           RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH
Sbjct: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 294

[Close]

BLAST of Csor.00g107690 vs. ExPASy TrEMBL
Match: A0A6J1IAY9 (rhomboid-like protein 20 OS=Cucurbita maxima OX=3661 GN=LOC111472941 PE=4 SV=1)

HSP 1 Score: 558 bits (1437), Expect = 3.86e-200
Identity = 288/294 (97.96%), Postives = 290/294 (98.64%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFWKLVMSVFAF 60
           M+GGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRF KLVMSVFAF
Sbjct: 1   MSGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAANL 120
           SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATA NL
Sbjct: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGIQLLLSSWRRSILPGIC 180
           VTSGPYGLLFASFVPFFFDIPVSTRFRV GVRFSDKSFIYLAG+QLLLSSWRRSILPGIC
Sbjct: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180

Query: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNV GIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE
Sbjct: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 294
           RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH
Sbjct: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 294

[Close]

BLAST of Csor.00g107690 vs. ExPASy TrEMBL
Match: A0A5D3D5B1 (Rhomboid-like protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold257G00390 PE=4 SV=1)

HSP 1 Score: 526 bits (1356), Expect = 7.65e-188
Identity = 271/294 (92.18%), Postives = 281/294 (95.58%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFWKLVMSVFAF 60
           MNGGPSGFNNAPVTRTFIIASALFT+FFGIQ RSIKLGLSYQDVIVKLRFWKLVMSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAANL 120
           SSTPEL+FGLFLLYYFRVFERQIGSNKYSVF LFSII SLLFEVLAISLLKDPAA   NL
Sbjct: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAA---NL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGIQLLLSSWRRSILPGIC 180
           VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAG+QLLLSSWRRSILPGIC
Sbjct: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180

Query: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNVFGIRKAKFPEFISSFFSR  LPS GNPPAAPNRDVRGNMPSFMSR VE
Sbjct: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRPVE 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 294
           RN+   P+A+EPPED+IATLVSMGFDRNSARQAL++ARNDVN+ATNILLESQSH
Sbjct: 241 RNYPSAPSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 291

[Close]

BLAST of Csor.00g107690 vs. ExPASy TrEMBL
Match: A0A1S3CMQ9 (rhomboid-like protein 20 OS=Cucumis melo OX=3656 GN=LOC103502692 PE=4 SV=1)

HSP 1 Score: 526 bits (1356), Expect = 7.65e-188
Identity = 271/294 (92.18%), Postives = 281/294 (95.58%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFWKLVMSVFAF 60
           MNGGPSGFNNAPVTRTFIIASALFT+FFGIQ RSIKLGLSYQDVIVKLRFWKLVMSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAANL 120
           SSTPEL+FGLFLLYYFRVFERQIGSNKYSVF LFSII SLLFEVLAISLLKDPAA   NL
Sbjct: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAA---NL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGIQLLLSSWRRSILPGIC 180
           VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAG+QLLLSSWRRSILPGIC
Sbjct: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180

Query: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNVFGIRKAKFPEFISSFFSR  LPS GNPPAAPNRDVRGNMPSFMSR VE
Sbjct: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRPVE 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 294
           RN+   P+A+EPPED+IATLVSMGFDRNSARQAL++ARNDVN+ATNILLESQSH
Sbjct: 241 RNYPSAPSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 291

[Close]

BLAST of Csor.00g107690 vs. ExPASy TrEMBL
Match: A0A6J1DN01 (rhomboid-like protein 20 OS=Momordica charantia OX=3673 GN=LOC111021509 PE=4 SV=1)

HSP 1 Score: 526 bits (1355), Expect = 1.13e-187
Identity = 272/295 (92.20%), Postives = 282/295 (95.59%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFWKLVMSVFAF 60
           MNGGPSGFNNAPVTRTFIIASALFT+FFGIQ RSIKLGLSYQDVIVKLRFWKL+MSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLLMSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAANL 120
           SSTPEL+FGLFLLYYFRVFERQIGSNKYSVF LFSI+ SLLFEVLAISLLKDPA    NL
Sbjct: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIVTSLLFEVLAISLLKDPAV---NL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGIQLLLSSWRRSILPGIC 180
           VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAG+QLLLSSWRRSILPGIC
Sbjct: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180

Query: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGNPPAA-PNRDVRGNMPSFMSRQV 240
           GILAGSLYRLNVFGIRKAKFPEFISSFFS+F LPSVGNPPAA PNRDVRGNMPSF  RQV
Sbjct: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSQFSLPSVGNPPAAAPNRDVRGNMPSFTGRQV 240

Query: 241 ERNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 294
           ERN+  VPTA+EPPEDSIATLVSMGFDRNSARQAL+RARNDVNMATNILLE+QSH
Sbjct: 241 ERNYPTVPTATEPPEDSIATLVSMGFDRNSARQALVRARNDVNMATNILLEAQSH 292

[Close]

BLAST of Csor.00g107690 vs. TAIR 10
Match: AT3G56740.1 (Ubiquitin-associated (UBA) protein )

HSP 1 Score: 427.2 bits (1097), Expect = 1.1e-119
Identity = 218/296 (73.65%), Postives = 252/296 (85.14%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFWKLVMSVFAF 60
           MNGGPSGF+NAPVT+ F+I SALFTVFFGIQ RS KLGLSYQD+  K R WKL+MS FAF
Sbjct: 1   MNGGPSGFHNAPVTKAFVITSALFTVFFGIQGRSSKLGLSYQDIFEKFRIWKLIMSTFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAANL 120
           SSTPEL+FGL+LLYYFRVFERQIGSNKYSVF LFS  +SLL EV+ +SLLKD   T ANL
Sbjct: 61  SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSGTVSLLLEVILLSLLKD---TTANL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGIQLLLSSWRRSILPGIC 180
           +TSGPYGL+FASF+PF+ DIPVSTRFRVFGV FSDKSFIYLAG+QLLLSSW+RSI PGIC
Sbjct: 121 LTSGPYGLIFASFIPFYLDIPVSTRFRVFGVNFSDKSFIYLAGVQLLLSSWKRSIFPGIC 180

Query: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGN-PPAAPNRDVRGNMPSFMSRQV 240
           GI+AGSLYRLN+ GIRKAKFPEF++SFFSR   PS GN PP AP+R++ G +     R+ 
Sbjct: 181 GIIAGSLYRLNILGIRKAKFPEFVASFFSRLSFPSFGNSPPPAPSRNIVGTISPNTGRRA 240

Query: 241 ERNF-TPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 295
           ER+   P+P++ EP E++I TLVSMGFDRN+ARQAL+ ARNDVN ATNILLE+QSH
Sbjct: 241 ERSQPAPLPSSVEPSEEAITTLVSMGFDRNAARQALVHARNDVNAATNILLEAQSH 293

[Close]

BLAST of Csor.00g107690 vs. TAIR 10
Match: AT2G41160.1 (Ubiquitin-associated (UBA) protein )

HSP 1 Score: 385.6 bits (989), Expect = 3.6e-107
Identity = 199/294 (67.69%), Postives = 235/294 (79.93%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFWKLVMSVFAF 60
           MNGGPSGFNNAPVT+ F+IA+ALFTVFFGI+  S KLGLSYQD+  K R WKL++S FAF
Sbjct: 1   MNGGPSGFNNAPVTKAFVIATALFTVFFGIRGGSSKLGLSYQDIFEKFRIWKLIISAFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAANL 120
           SST +LL GL+LLY+FRVFERQIGSNKYSVF  FS  +SL+ E + +SL KDP    ANL
Sbjct: 61  SSTTQLLSGLYLLYFFRVFERQIGSNKYSVFIFFSGFVSLILETILLSLTKDP---TANL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGIQLLLSSWRRSILPGIC 180
           +TSGPY L+FASFVPFF DIPV+ RF V GV FSDKSFIYLAG+QLLLSSW+RSI  GIC
Sbjct: 121 LTSGPYALVFASFVPFFLDIPVTKRFGVLGVHFSDKSFIYLAGVQLLLSSWKRSIFTGIC 180

Query: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GI+AGSLYRLN+FGIRKAKFPEF++S FSRF LPS+ +    P R      P+   + V 
Sbjct: 181 GIIAGSLYRLNIFGIRKAKFPEFMASLFSRFSLPSLSSHSQPPRR----TSPNLGRQAVR 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 295
               P+P+ +EP E++IATLVSMGFD+N+ARQAL+ ARNDVN ATNILLE+ SH
Sbjct: 241 AYRAPMPSTTEPSEEAIATLVSMGFDQNAARQALVHARNDVNAATNILLEAHSH 287

The following BLAST results are available for this feature:

BLAST of Csor.00g107690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LET3	1.5e-118	73.65	Rhomboid-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=RBL20 PE=2 SV=1	[more]
Q8RXQ2	5.1e-106	67.69	Rhomboid-like protein 18 OS=Arabidopsis thaliana OX=3702 GN=RBL18 PE=2 SV=1	[more]
Q5ZJQ8	4.8e-19	24.93	Ubiquitin-associated domain-containing protein 2 OS=Gallus gallus OX=9031 GN=UBA...	[more]
Q4R910	3.4e-17	25.22	Ubiquitin-associated domain-containing protein 2 OS=Macaca fascicularis OX=9541 ...	[more]
Q8NBM4	7.6e-17	25.44	Ubiquitin-associated domain-containing protein 2 OS=Homo sapiens OX=9606 GN=UBAC...	[more]

BLAST of Csor.00g107690 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6596983.1	2.60e-205	100.00	Rhomboid-like protein 20, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022936013.1	5.24e-205	99.66	rhomboid-like protein 20 [Cucurbita moschata]	[more]
XP_023539609.1	6.11e-204	98.98	rhomboid-like protein 20 [Cucurbita pepo subsp. pepo]	[more]
XP_022974301.1	7.98e-200	97.96	rhomboid-like protein 20 [Cucurbita maxima]	[more]
XP_008464944.1	1.58e-187	92.18	PREDICTED: rhomboid-like protein 20 [Cucumis melo] >KAA0057225.1 rhomboid-like p...	[more]

BLAST of Csor.00g107690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FC34	2.54e-205	99.66	rhomboid-like protein 20 OS=Cucurbita moschata OX=3662 GN=LOC111442736 PE=4 SV=1	[more]
A0A6J1IAY9	3.86e-200	97.96	rhomboid-like protein 20 OS=Cucurbita maxima OX=3661 GN=LOC111472941 PE=4 SV=1	[more]
A0A5D3D5B1	7.65e-188	92.18	Rhomboid-like protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CMQ9	7.65e-188	92.18	rhomboid-like protein 20 OS=Cucumis melo OX=3656 GN=LOC103502692 PE=4 SV=1	[more]
A0A6J1DN01	1.13e-187	92.20	rhomboid-like protein 20 OS=Momordica charantia OX=3673 GN=LOC111021509 PE=4 SV=...	[more]

BLAST of Csor.00g107690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56740.1	1.1e-119	73.65	Ubiquitin-associated (UBA) protein	[more]
AT2G41160.1	3.6e-107	67.69	Ubiquitin-associated (UBA) protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015940	Ubiquitin-associated domain	SMART	SM00165	uba_6	coord: 253..290 e-value: 2.6E-10 score: 50.3
IPR015940	Ubiquitin-associated domain	PFAM	PF00627	UBA	coord: 253..288 e-value: 1.3E-11 score: 44.1
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 251..291 score: 15.028895
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 48..192 e-value: 2.7E-6 score: 27.4
IPR035952	Rhomboid-like superfamily	GENE3D	1.20.1540.10		coord: 9..191 e-value: 5.4E-8 score: 34.8
IPR035952	Rhomboid-like superfamily	SUPERFAMILY	144091	Rhomboid-like	coord: 9..189
None	No IPR available	GENE3D	1.10.8.10		coord: 250..294 e-value: 2.6E-13 score: 51.6
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 247..292

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g107690.m01	Csor.00g107690.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004252	serine-type endopeptidase activity