Csor.00g105350 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g105350
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr17: 8224501 .. 8224755 (-)
RNA-Seq ExpressionCsor.00g105350
SyntenyCsor.00g105350
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCACAAAACCAGGAAGAACTCACAGGATCGATCCCAACTGCCACCAGTTCGTTACCAAACCATTTGAAATGGCCTTCTTCTCCTCTCACATGTTCCGCTGCTGCTTCCCTCCCTCCCGAGTCTCCGCTGCCGGCAAGGAGATTCCGTCGAAGAATCTGAAATCGGAGAAGAAACCGGCGTCGCCGGAGCGCAAGGGAGCTCCGATTGTCGTGTCGTATTTTCCGGTTAATTCCTATCCTTCTCGCATGTAG

mRNA sequence

ATGTCCACAAAACCAGGAAGAACTCACAGGATCGATCCCAACTGCCACCAGTTCGTTACCAAACCATTTGAAATGGCCTTCTTCTCCTCTCACATGTTCCGCTGCTGCTTCCCTCCCTCCCGAGTCTCCGCTGCCGGCAAGGAGATTCCGTCGAAGAATCTGAAATCGGAGAAGAAACCGGCGTCGCCGGAGCGCAAGGGAGCTCCGATTGTCGTGTCGTATTTTCCGGTTAATTCCTATCCTTCTCGCATGTAG

Coding sequence (CDS)

ATGTCCACAAAACCAGGAAGAACTCACAGGATCGATCCCAACTGCCACCAGTTCGTTACCAAACCATTTGAAATGGCCTTCTTCTCCTCTCACATGTTCCGCTGCTGCTTCCCTCCCTCCCGAGTCTCCGCTGCCGGCAAGGAGATTCCGTCGAAGAATCTGAAATCGGAGAAGAAACCGGCGTCGCCGGAGCGCAAGGGAGCTCCGATTGTCGTGTCGTATTTTCCGGTTAATTCCTATCCTTCTCGCATGTAG

Protein sequence

MSTKPGRTHRIDPNCHQFVTKPFEMAFFSSHMFRCCFPPSRVSAAGKEIPSKNLKSEKKPASPERKGAPIVVSYFPVNSYPSRM
Homology
BLAST of Csor.00g105350 vs. NCBI nr
Match: KAG6575670.1 (hypothetical protein SDJN03_26309, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 179 bits (453), Expect = 1.11e-56
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0

Query: 1  MSTKPGRTHRIDPNCHQFVTKPFEMAFFSSHMFRCCFPPSRVSAAGKEIPSKNLKSEKKP 60
          MSTKPGRTHRIDPNCHQFVTKPFEMAFFSSHMFRCCFPPSRVSAAGKEIPSKNLKSEKKP
Sbjct: 1  MSTKPGRTHRIDPNCHQFVTKPFEMAFFSSHMFRCCFPPSRVSAAGKEIPSKNLKSEKKP 60

Query: 61 ASPERKGAPIVVSYFPVNSYPSRM 84
          ASPERKGAPIVVSYFPVNSYPSRM
Sbjct: 61 ASPERKGAPIVVSYFPVNSYPSRM 84

BLAST of Csor.00g105350 vs. NCBI nr
Match: OIW11784.1 (hypothetical protein TanjilG_14324 [Lupinus angustifolius])

HSP 1 Score: 53.5 bits (127), Expect = 3.04e-07
Identity = 30/60 (50.00%), Postives = 39/60 (65.00%), Query Frame = 0

Query: 32 MFRCCFPPSRVSAA-------GKEIPSKNLKSEKKPASPERKGAPIVVSYFPVNSYPSRM 84
          +F  CF PS  S+A       G ++  K++ SEK  +  E KGAPIVVSYFP+NSYPSR+
Sbjct: 6  VFLNCFAPSTSSSAQVSDHAEGSQL--KSISSEKPKSKSESKGAPIVVSYFPINSYPSRL 63

BLAST of Csor.00g105350 vs. NCBI nr
Match: OIW11738.1 (hypothetical protein TanjilG_10940 [Lupinus angustifolius])

HSP 1 Score: 52.4 bits (124), Expect = 8.66e-07
Identity = 30/60 (50.00%), Postives = 38/60 (63.33%), Query Frame = 0

Query: 32 MFRCCFPPSRVSAA-------GKEIPSKNLKSEKKPASPERKGAPIVVSYFPVNSYPSRM 84
          +F  CF PS  S+A       G ++  K++ SEK  +  E KGAPIVVSYFP NSYPSR+
Sbjct: 6  VFLNCFAPSTSSSAQVSDHAEGSQL--KSISSEKPKSKSESKGAPIVVSYFPTNSYPSRL 63

BLAST of Csor.00g105350 vs. NCBI nr
Match: KAG6789208.1 (hypothetical protein POTOM_005298 [Populus tomentosa])

HSP 1 Score: 51.6 bits (122), Expect = 1.70e-06
Identity = 34/63 (53.97%), Postives = 39/63 (61.90%), Query Frame = 0

Query: 25 MAFFSSHMFRCCFPP--SRVSAAGKEIPS-KNLKSEKKPASPERKGAPIVVSYFPVNSYP 84
          MA FS+ +F C  P   SRVS     +P  K  KSEK     +  GAPIVVSYFPVNSYP
Sbjct: 1  MAKFSA-IFSCFVPSFFSRVSNDNVSVPEVKAPKSEKSKGKSKSSGAPIVVSYFPVNSYP 60

BLAST of Csor.00g105350 vs. NCBI nr
Match: KAG6789210.1 (hypothetical protein POTOM_005300 [Populus tomentosa])

HSP 1 Score: 51.6 bits (122), Expect = 1.70e-06
Identity = 33/63 (52.38%), Postives = 40/63 (63.49%), Query Frame = 0

Query: 25 MAFFSSHMFRCCFPP--SRVSAAGKEIPS-KNLKSEKKPASPERKGAPIVVSYFPVNSYP 84
          MA FS+ +F C  P   +RVS+    +P  K  KSEK     +  GAPIVVSYFPVNSYP
Sbjct: 1  MAQFSA-IFSCFVPSFSARVSSDNVSVPEVKAPKSEKSKGKSKSSGAPIVVSYFPVNSYP 60

BLAST of Csor.00g105350 vs. ExPASy TrEMBL
Match: A0A1J7HG57 (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_14324 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.47e-07
Identity = 30/60 (50.00%), Postives = 39/60 (65.00%), Query Frame = 0

Query: 32 MFRCCFPPSRVSAA-------GKEIPSKNLKSEKKPASPERKGAPIVVSYFPVNSYPSRM 84
          +F  CF PS  S+A       G ++  K++ SEK  +  E KGAPIVVSYFP+NSYPSR+
Sbjct: 6  VFLNCFAPSTSSSAQVSDHAEGSQL--KSISSEKPKSKSESKGAPIVVSYFPINSYPSRL 63

BLAST of Csor.00g105350 vs. ExPASy TrEMBL
Match: A0A1J7HZD2 (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_10940 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.19e-07
Identity = 30/60 (50.00%), Postives = 38/60 (63.33%), Query Frame = 0

Query: 32 MFRCCFPPSRVSAA-------GKEIPSKNLKSEKKPASPERKGAPIVVSYFPVNSYPSRM 84
          +F  CF PS  S+A       G ++  K++ SEK  +  E KGAPIVVSYFP NSYPSR+
Sbjct: 6  VFLNCFAPSTSSSAQVSDHAEGSQL--KSISSEKPKSKSESKGAPIVVSYFPTNSYPSRL 63

BLAST of Csor.00g105350 vs. ExPASy TrEMBL
Match: I1KTJ6 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_08G151100 PE=4 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.65e-06
Identity = 29/58 (50.00%), Postives = 34/58 (58.62%), Query Frame = 0

Query: 30 SHMFRCCFPPSRVSAAGKEIPSKNLKS---EKKPASPERKGAPIVVSYFPVNSYPSRM 84
          S +F C  P S    +     S  LKS   EK  + P+ KGAPIVVSYFPVN YPSR+
Sbjct: 5  SSIFNCFVPSSSSQVSDYAKGSSQLKSPSSEKPKSKPKSKGAPIVVSYFPVNHYPSRL 62

BLAST of Csor.00g105350 vs. ExPASy TrEMBL
Match: A0A445JF04 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_020619 PE=4 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.65e-06
Identity = 29/58 (50.00%), Postives = 34/58 (58.62%), Query Frame = 0

Query: 30 SHMFRCCFPPSRVSAAGKEIPSKNLKS---EKKPASPERKGAPIVVSYFPVNSYPSRM 84
          S +F C  P S    +     S  LKS   EK  + P+ KGAPIVVSYFPVN YPSR+
Sbjct: 5  SSIFNCFVPSSSSQVSDYAKGSSQLKSPSSEKPKSKPKSKGAPIVVSYFPVNHYPSRL 62

BLAST of Csor.00g105350 vs. ExPASy TrEMBL
Match: A0A6A4N473 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lalb_Chr25g0283431 PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 6.23e-06
Identity = 29/60 (48.33%), Postives = 35/60 (58.33%), Query Frame = 0

Query: 25 MAFFSSHMFRCCFPPSRVSAAGKEIPSKNLKSEKKPASPERKGAPIVVSYFPVNSYPSRM 84
          M+FF    F C  P S      K    K+  SEK  +  + KGAPIVVSYFPVNS+PSR+
Sbjct: 4  MSFF----FNCFAPSSSQIIDSKGSQLKSQSSEKPKSKSKSKGAPIVVSYFPVNSHPSRL 59

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6575670.11.11e-56100.00hypothetical protein SDJN03_26309, partial [Cucurbita argyrosperma subsp. sorori... [more]
OIW11784.13.04e-0750.00hypothetical protein TanjilG_14324 [Lupinus angustifolius][more]
OIW11738.18.66e-0750.00hypothetical protein TanjilG_10940 [Lupinus angustifolius][more]
KAG6789208.11.70e-0653.97hypothetical protein POTOM_005298 [Populus tomentosa][more]
KAG6789210.11.70e-0652.38hypothetical protein POTOM_005300 [Populus tomentosa][more]
Match NameE-valueIdentityDescription
A0A1J7HG571.47e-0750.00Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_14324 PE=4 S... [more]
A0A1J7HZD24.19e-0750.00Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_10940 PE=4 S... [more]
I1KTJ61.65e-0650.00Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_08G151100 PE=4 SV=1[more]
A0A445JF041.65e-0650.00Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_020619 PE=4 SV=1[more]
A0A6A4N4736.23e-0648.33Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lalb_Chr25g0283431 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..65

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g105350.m01Csor.00g105350.m01mRNA