Csor.00g105140 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g105140
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr17: 8109044 .. 8109456 (-)
RNA-Seq ExpressionCsor.00g105140
SyntenyCsor.00g105140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGCCCACCGGTACCCACCCATGAAACTGGCGACGGGTGGGCGGTGGGCCGCCGTGCCGTGGTGGGGCACGATGTCGTTTTATTGGGTTTCAACTTTAAATGGAATTCTCAAAGTCTCAAAGGGGCGGTGGAAGGGCGTAAGACAGAGAAAGTAGGGCTGGCAATGGAGCATGACCAAATAATGTTATCTCTTTCTCAATAAATTATGTTCTTAAAACCTATTTAAAAAAAGAAAAAAAAACAGATTAATTCATAAAATAAACTGATAATTTAATCCAAAATAAATGCTTTTAGGGATCTCCAAATATATTTGGCCTACCACTGACCCAGATGGCGGCGGAGGAGGAGGTCGTGACCGGTGGGGCAGCCAATTGGGGCCCACCTAGTGGGACCCCTTGGCACAACTAG

mRNA sequence

ATGGAGAGCCCACCGGTACCCACCCATGAAACTGGCGACGGGTGGGCGGTGGGCCGCCGTGCCGTGGTGGGGCACGATGTCGTTTTATTGGGTTTCAACTTTAAATGGAATTCTCAAAGTCTCAAAGGGGCGGTGGAAGGGCGTAAGACAGAGAAAGGATCTCCAAATATATTTGGCCTACCACTGACCCAGATGGCGGCGGAGGAGGAGGTCGTGACCGGTGGGGCAGCCAATTGGGGCCCACCTAGTGGGACCCCTTGGCACAACTAG

Coding sequence (CDS)

ATGGAGAGCCCACCGGTACCCACCCATGAAACTGGCGACGGGTGGGCGGTGGGCCGCCGTGCCGTGGTGGGGCACGATGTCGTTTTATTGGGTTTCAACTTTAAATGGAATTCTCAAAGTCTCAAAGGGGCGGTGGAAGGGCGTAAGACAGAGAAAGGATCTCCAAATATATTTGGCCTACCACTGACCCAGATGGCGGCGGAGGAGGAGGTCGTGACCGGTGGGGCAGCCAATTGGGGCCCACCTAGTGGGACCCCTTGGCACAACTAG

Protein sequence

MESPPVPTHETGDGWAVGRRAVVGHDVVLLGFNFKWNSQSLKGAVEGRKTEKGSPNIFGLPLTQMAAEEEVVTGGAANWGPPSGTPWHN
Homology
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BLAST of Csor.00g105140 vs. NCBI nr
Match: KAG6575649.1 (hypothetical protein SDJN03_26288, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 194 bits (492), Expect = 1.78e-62
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0 

Query: 1  MESPPVPTHETGDGWAVGRRAVVGHDVVLLGFNFKWNSQSLKGAVEGRKTEKGSPNIFGL 60
          MESPPVPTHETGDGWAVGRRAVVGHDVVLLGFNFKWNSQSLKGAVEGRKTEKGSPNIFGL
Sbjct: 1  MESPPVPTHETGDGWAVGRRAVVGHDVVLLGFNFKWNSQSLKGAVEGRKTEKGSPNIFGL 60

Query: 61 PLTQMAAEEEVVTGGAANWGPPSGTPWHN 89
          PLTQMAAEEEVVTGGAANWGPPSGTPWHN
Sbjct: 61 PLTQMAAEEEVVTGGAANWGPPSGTPWHN 89

The following BLAST results are available for this feature:
BLAST of Csor.00g105140 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g105140 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6575649.11.78e-62100.00hypothetical protein SDJN03_26288, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g105140 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g105140 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g105140.m01Csor.00g105140.m01mRNA