Csor.00g104290 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g104290
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Auxin-responsive protein
Location	Csor_Chr17: 7694157 .. 7695757 (+)
RNA-Seq Expression	Csor.00g104290
Synteny	Csor.00g104290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAACGAATCCCTCGGGCTCGAGATCACCGAGCTTCGCCTAGGTCTCCCTGGCAACAACGACAAAAACGAGAAGAAACGAGCCTATGCAGATATCGTCGATGAAGATGAGCCAACTAGGGATGATGTTGGCCGAAAGAATAACACGACGAGTAAGGGACAGGTCGTGGGATGGCCACCTGTGTGTTCTTATCGAAAAAAGAATAGCTTTGGAGAGAAAGAGTCGTTGCTTAAGAATGAGAATTCGAAAATGTACGTGAAGATTAGTATGGATGGAGCTCCATTTCTGCGTAAACTTGACTTGGGTTCTCATGAAGGTTACTCGGATCTTGCTGTTGCTCTCGAGAAGCTCTTTGCCTGCTTTGGAACCGGTAAATTAATTTAAAGCTCTATTTTCTTCCTCTTTTATACACTTTTTTTTACCATTTGTAGAGTAACTTAATAAGTTAATATTGCATGGTAATTAAAAGTTCTTTCATTCTAGAAAAATATATAAATAAGAGTATGGGCAAATTTGTAAAATGACAGGGAAGACATCAAAGCATGGAGAAAGTTCTAATTACGTTCCCATTTACGAGGACAAAGATGGAGATTGGATGCTTGTTGGAGACGTCCCATGGGAGTAAGTTTACTTTTTATCTTTTTAATTTCTAAATTTAATTTTTCTTTTTACTAAAATTAAATTTTCATTTTCTTTAATTTAATAAATTATGTAGGGTAAAATTTTAAATCAATAGCTTACCATCGATGTTCCCGGTCAATAACGTGTGTCTAAGCCACTCTCATGTTCCCGGTCGTAAATTAAAAATGTCCATTTAACCCATAAATAAGGATTATATTTCCTACCCCGCCTCAATCCTACTCAAATCTTTGCGTTGTCATCCCTAGTTTTTTAGGGTTGAATATGTTATACATCGAAAATATTAATCCATTAAATACTCTTTAAAATAAATATATTTTTTTAAAAATTAATATATAAAAAAAAAAATTTGTGGACGTAGAGATTGAATAAAGGATGGGGAAAAGAACGGGAAAGCTTCTCCATCCCCGCTCCGGTAGAAGGAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTTAAATTACCGTTGATTAACGGTGCTTTAAATTGAAGTCTTCCGTCAAAGTCAATTTGATTTGATTGATAAAATCGCTATTAATCTTCAACACTTCATTTATGAAGAGAGGTAGGGGATGGGCAAAATGGTCTTTTCAAATCTCCCATTCCATTCATTAACGCGCACAACATGATACCGACACGAACCAAACCTTAATAATAATGTCAGCCAGATTACAAAGTTGTCCCTCACTGCATTTCTCCTTGCCCCCTGCCCGACACATCCCATTTATTTAAAATCATAATAATCCAATTTTATATTTGAAAAGAATTATTCCCTAATTAAATTTGTTATTATAATTTAAAAAAAAAATTAATAATATTATTAATTTTTCAGGATGTTTATGGAATCGTGCAAGAGGCTAAGGATAATGAAGAGATCCGAGGCCAAAGGGTTCGGCCTGCAATTTAAAGATCTATGA

mRNA sequence

ATGGCAAACGAATCCCTCGGGCTCGAGATCACCGAGCTTCGCCTAGGTCTCCCTGGCAACAACGACAAAAACGAGAAGAAACGAGCCTATGCAGATATCGTCGATGAAGATGAGCCAACTAGGGATGATGTTGGCCGAAAGAATAACACGACGAGTAAGGGACAGGTCGTGGGATGGCCACCTGTGTGTTCTTATCGAAAAAAGAATAGCTTTGGAGAGAAAGAGTCGTTGCTTAAGAATGAGAATTCGAAAATGTACGTGAAGATTAGTATGGATGGAGCTCCATTTCTGCGTAAACTTGACTTGGGTTCTCATGAAGGTTACTCGGATCTTGCTGTTGCTCTCGAGAAGCTCTTTGCCTGCTTTGGAACCGGGAAGACATCAAAGCATGGAGAAAGTTCTAATTACGTTCCCATTTACGAGGACAAAGATGGAGATTGGATGCTTGTTGGAGACGTCCCATGGGAGATGTTTATGGAATCGTGCAAGAGGCTAAGGATAATGAAGAGATCCGAGGCCAAAGGGTTCGGCCTGCAATTTAAAGATCTATGA

Coding sequence (CDS)

ATGGCAAACGAATCCCTCGGGCTCGAGATCACCGAGCTTCGCCTAGGTCTCCCTGGCAACAACGACAAAAACGAGAAGAAACGAGCCTATGCAGATATCGTCGATGAAGATGAGCCAACTAGGGATGATGTTGGCCGAAAGAATAACACGACGAGTAAGGGACAGGTCGTGGGATGGCCACCTGTGTGTTCTTATCGAAAAAAGAATAGCTTTGGAGAGAAAGAGTCGTTGCTTAAGAATGAGAATTCGAAAATGTACGTGAAGATTAGTATGGATGGAGCTCCATTTCTGCGTAAACTTGACTTGGGTTCTCATGAAGGTTACTCGGATCTTGCTGTTGCTCTCGAGAAGCTCTTTGCCTGCTTTGGAACCGGGAAGACATCAAAGCATGGAGAAAGTTCTAATTACGTTCCCATTTACGAGGACAAAGATGGAGATTGGATGCTTGTTGGAGACGTCCCATGGGAGATGTTTATGGAATCGTGCAAGAGGCTAAGGATAATGAAGAGATCCGAGGCCAAAGGGTTCGGCCTGCAATTTAAAGATCTATGA

Protein sequence

MANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVGRKNNTTSKGQVVGWPPVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFACFGTGKTSKHGESSNYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGFGLQFKDL

Homology

[Close]

BLAST of Csor.00g104290 vs. ExPASy Swiss-Prot
Match: P13088 (Auxin-induced protein AUX22 OS=Glycine max OX=3847 GN=AUX22 PE=2 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 3.3e-63
Identity = 125/190 (65.79%), Postives = 144/190 (75.79%), Query Frame = 0


Query: 1   MANESLGLEITELRLGLPGN-------NDKNEKKRAYADIVD--EDEPTRDDVGRKNNTT 60
           MA E LGLEITELRLGLP         N KNEKKRA+++I D   DE +    G +   T
Sbjct: 1   MAKEGLGLEITELRLGLPDAEHQVSVVNKKNEKKRAFSEIDDGVGDENSSSGGGDRKMET 60

Query: 61  SKGQVVGWPPVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDL 120
           +K QVVGWPPVCSYRKKNS  E         SKMYVK+SMDGAPFLRK+DLG H+GYSDL
Sbjct: 61  NKSQVVGWPPVCSYRKKNSMNEGA-------SKMYVKVSMDGAPFLRKIDLGLHKGYSDL 120

Query: 121 AVALEKLFACFGTGKTSKHGESSNYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRS 180
           A+AL+KLF C+G  +  K+ ++S +VPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMK+S
Sbjct: 121 ALALDKLFGCYGMVEALKNADNSEHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKKS 180

Query: 181 EAKGFGLQFK 182
           +AKGFGLQ K
Sbjct: 181 DAKGFGLQPK 183

[Close]

BLAST of Csor.00g104290 vs. ExPASy Swiss-Prot
Match: P32293 (Auxin-induced protein 22A OS=Vigna radiata var. radiata OX=3916 GN=AUX22A PE=2 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.0e-60
Identity = 121/190 (63.68%), Postives = 138/190 (72.63%), Query Frame = 0


Query: 1   MANESLGLEITELRLGLP--------GNNDKNEKKRAYADIVD-EDEPTRDDVGRKNNTT 60
           MA E LGLEITELRLGLP          N + + KR +++I D  DE +    G      
Sbjct: 1   MAKEGLGLEITELRLGLPDAEHVAVANKNGEKKNKRVFSEIDDVGDENSSSGGGGDRKME 60

Query: 61  SKGQVVGWPPVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDL 120
           +K QVVGWPPVCSYRKKNS         NE SKMYVK+SMDGAPFLRK+DLG H+GYSDL
Sbjct: 61  NKNQVVGWPPVCSYRKKNSV--------NEASKMYVKVSMDGAPFLRKMDLGMHKGYSDL 120

Query: 121 AVALEKLFACFGTGKTSKHGESSNYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRS 180
           A ALEKLF C+G  +  K+ E+  +VPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKR+
Sbjct: 121 AFALEKLFGCYGMVEALKNVENGEHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRA 180

Query: 181 EAKGFGLQFK 182
           +AKGFGLQ K
Sbjct: 181 DAKGFGLQPK 182

[Close]

BLAST of Csor.00g104290 vs. ExPASy Swiss-Prot
Match: O24541 (Auxin-induced protein 22C OS=Vigna radiata var. radiata OX=3916 GN=AUX22C PE=2 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 7.2e-58
Identity = 117/189 (61.90%), Postives = 138/189 (73.02%), Query Frame = 0


Query: 1   MANESLGLEITELRLGLPG-------NNDKNE-KKRAYADIVDEDEPTRDDVGRKNNTTS 60
           M  E LGLEITELRLGLPG       + DKN+ KKR ++DI  E+  + +D G+K    +
Sbjct: 1   MEKEDLGLEITELRLGLPGAGGENNTDKDKNKNKKRVFSDIEGENSSSEED-GKKE---T 60

Query: 61  KGQVVGWPPVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLA 120
           K QVVGWPPVCSYRKKN+  E          K+YVK+SMDGAPFLRK+DL  H+GYSDLA
Sbjct: 61  KNQVVGWPPVCSYRKKNTVNE---------PKLYVKVSMDGAPFLRKIDLAMHKGYSDLA 120

Query: 121 VALEKLFACFGTGKTSKHGESSNYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSE 180
            AL+K F C+G  +  K  E++ +VPIYEDKDGDWMLVGDVPWEMF ESCKRLRIMKRS+
Sbjct: 121 FALDKFFGCYGICEALKDAENAEHVPIYEDKDGDWMLVGDVPWEMFRESCKRLRIMKRSD 176

Query: 181 AKGFGLQFK 182
           AKGF LQ K
Sbjct: 181 AKGFDLQPK 176

[Close]

BLAST of Csor.00g104290 vs. ExPASy Swiss-Prot
Match: P49680 (Auxin-induced protein IAA6 OS=Pisum sativum OX=3888 GN=IAA6 PE=2 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.8e-56
Identity = 115/182 (63.19%), Postives = 132/182 (72.53%), Query Frame = 0


Query: 1   MANESLGLEITELRLGLP-GNNDKNEKKRAYADIVDEDEPTRDDVGRKNNTTSKGQVVGW 60
           MA E LGLEITELRLGL  G   KNEKKR +++I D         G + +   K QVVGW
Sbjct: 1   MAREGLGLEITELRLGLSCGEPKKNEKKRMFSEI-DGGVEENGGSGDRKSVDKKNQVVGW 60

Query: 61  PPVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLF 120
           PPVCSYRKKN          NE SKMY+K+SMDGAP+LRK+DL  H+GY +LA+ALEKLF
Sbjct: 61  PPVCSYRKKN---------MNEGSKMYMKVSMDGAPYLRKIDLCLHKGYLELALALEKLF 120

Query: 121 ACFGTGKTSKHGESSNYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGFGLQ 180
            C G  +  K  E+  +VPIYEDKDGDWMLVGDVPWEMF+ESCKRLRIMKRS+AKGF LQ
Sbjct: 121 DCCGIEEALKDAENCEHVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSDAKGFDLQ 172

Query: 181 FK 182
            K
Sbjct: 181 PK 172

[Close]

BLAST of Csor.00g104290 vs. ExPASy Swiss-Prot
Match: O24409 (Auxin-responsive protein IAA19 OS=Arabidopsis thaliana OX=3702 GN=IAA19 PE=1 SV=2)

HSP 1 Score: 201.1 bits (510), Expect = 1.1e-50
Identity = 110/194 (56.70%), Postives = 132/194 (68.04%), Query Frame = 0


Query: 1   MANESLGLEITELRLGLPGNN--DKNEKKRAYADI--------VDEDE----PTRDDVGR 60
           M  E LGLEITELRLGLPG +  +K  KKRA+ ++         D+ E     +  D  +
Sbjct: 1   MEKEGLGLEITELRLGLPGRDVAEKMMKKRAFTEMNMTSSGSNSDQCESGVVSSGGDAEK 60

Query: 61  KNNT-TSKGQVVGWPPVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSH 120
            N++  +K QVVGWPPVCSYRKKNS  E  +    +    YVK+SMDG P+LRK+DLGS 
Sbjct: 61  VNDSPAAKSQVVGWPPVCSYRKKNSCKEAST---TKVGLGYVKVSMDGVPYLRKMDLGSS 120

Query: 121 EGYSDLAVALEKLFACFGTGKTSKHGESSNYVPIYEDKDGDWMLVGDVPWEMFMESCKRL 180
           +GY DLA AL+KLF   G G   K G++  YV IYEDKDGDWML GDVPW MF+ESCKRL
Sbjct: 121 QGYDDLAFALDKLFGFRGIGVALKDGDNCEYVTIYEDKDGDWMLAGDVPWGMFLESCKRL 180

[Close]

BLAST of Csor.00g104290 vs. NCBI nr
Match: KAG6575564.1 (Auxin-induced protein AUX22, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 379 bits (973), Expect = 8.58e-133
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVGRKNNTTSKGQVVGWP 60
           MANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVGRKNNTTSKGQVVGWP
Sbjct: 1   MANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVGRKNNTTSKGQVVGWP 60

Query: 61  PVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFA 120
           PVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFA
Sbjct: 61  PVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFA 120

Query: 121 CFGTGKTSKHGESSNYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGFGLQF 180
           CFGTGKTSKHGESSNYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGFGLQF
Sbjct: 121 CFGTGKTSKHGESSNYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGFGLQF 180

Query: 181 KDL 183
           KDL
Sbjct: 181 KDL 183

[Close]

BLAST of Csor.00g104290 vs. NCBI nr
Match: KAG7014105.1 (Auxin-induced protein AUX22, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 377 bits (968), Expect = 3.51e-131
Identity = 182/183 (99.45%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVGRKNNTTSKGQVVGWP 60
           MANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVGRKNNTTSKGQVVGWP
Sbjct: 56  MANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVGRKNNTTSKGQVVGWP 115

Query: 61  PVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFA 120
           PVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFA
Sbjct: 116 PVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFA 175

Query: 121 CFGTGKTSKHGESSNYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGFGLQF 180
           CFGTGKTSKHGESS+YVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGFGLQF
Sbjct: 176 CFGTGKTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGFGLQF 235

Query: 181 KDL 183
           KDL
Sbjct: 236 KDL 238

[Close]

BLAST of Csor.00g104290 vs. NCBI nr
Match: XP_022954061.1 (auxin-induced protein AUX22 [Cucurbita moschata])

HSP 1 Score: 371 bits (953), Expect = 9.64e-130
Identity = 179/183 (97.81%), Postives = 181/183 (98.91%), Query Frame = 0


Query: 1   MANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVGRKNNTTSKGQVVGWP 60
           MANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDV RKNNTTSKGQVVGWP
Sbjct: 1   MANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVDRKNNTTSKGQVVGWP 60

Query: 61  PVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFA 120
           PVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLF 
Sbjct: 61  PVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFG 120

Query: 121 CFGTGKTSKHGESSNYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGFGLQF 180
           CFGTGKTSKHGESS+YVPIYEDKDGDWMLVGDVPWEMF+ESCKRLRIMKRSEAKGFGLQF
Sbjct: 121 CFGTGKTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSEAKGFGLQF 180

Query: 181 KDL 183
           KDL
Sbjct: 181 KDL 183

[Close]

BLAST of Csor.00g104290 vs. NCBI nr
Match: XP_023549188.1 (LOW QUALITY PROTEIN: auxin-induced protein AUX22-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 367 bits (941), Expect = 4.58e-127
Identity = 177/183 (96.72%), Postives = 180/183 (98.36%), Query Frame = 0


Query: 1   MANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVGRKNNTTSKGQVVGWP 60
           MANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEP+R D  RKNNTTSKGQVVGWP
Sbjct: 56  MANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPSRVDASRKNNTTSKGQVVGWP 115

Query: 61  PVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFA 120
           PVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFA
Sbjct: 116 PVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFA 175

Query: 121 CFGTGKTSKHGESSNYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGFGLQF 180
           CFGTGKTSKHGESS+YVPIYEDKDGDWMLVGDVPWEMF+ESCKRLRIMKRSEAKGFGLQF
Sbjct: 176 CFGTGKTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSEAKGFGLQF 235

Query: 181 KDL 183
           KDL
Sbjct: 236 KDL 238

[Close]

BLAST of Csor.00g104290 vs. NCBI nr
Match: XP_022992376.1 (auxin-induced protein AUX22-like [Cucurbita maxima])

HSP 1 Score: 364 bits (935), Expect = 3.76e-126
Identity = 174/183 (95.08%), Postives = 181/183 (98.91%), Query Frame = 0


Query: 1   MANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVGRKNNTTSKGQVVGWP 60
           MANESLGLEITELRLGLPGNN+KNEKKRAYADI+DEDEPTRD VGRKNNTTSKGQVVGWP
Sbjct: 56  MANESLGLEITELRLGLPGNNNKNEKKRAYADIIDEDEPTRDSVGRKNNTTSKGQVVGWP 115

Query: 61  PVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFA 120
           PVCSYRKKNSFGEKESLLK+EN KMYVKISMDGAPFLRKLDLGSH+GYSDLA+ALEKLFA
Sbjct: 116 PVCSYRKKNSFGEKESLLKSENLKMYVKISMDGAPFLRKLDLGSHQGYSDLALALEKLFA 175

Query: 121 CFGTGKTSKHGESSNYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGFGLQF 180
           CFGTGKTSKHGESS+YVPIYEDKDGDWMLVGDVPWEMF+ESCKRLRIMKRSEAKGFGLQF
Sbjct: 176 CFGTGKTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSEAKGFGLQF 235

Query: 181 KDL 183
           KDL
Sbjct: 236 KDL 238

[Close]

BLAST of Csor.00g104290 vs. ExPASy TrEMBL
Match: A0A6J1GPU1 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111456436 PE=3 SV=1)

HSP 1 Score: 371 bits (953), Expect = 4.67e-130
Identity = 179/183 (97.81%), Postives = 181/183 (98.91%), Query Frame = 0


Query: 1   MANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVGRKNNTTSKGQVVGWP 60
           MANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDV RKNNTTSKGQVVGWP
Sbjct: 1   MANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVDRKNNTTSKGQVVGWP 60

Query: 61  PVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFA 120
           PVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLF 
Sbjct: 61  PVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFG 120

Query: 121 CFGTGKTSKHGESSNYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGFGLQF 180
           CFGTGKTSKHGESS+YVPIYEDKDGDWMLVGDVPWEMF+ESCKRLRIMKRSEAKGFGLQF
Sbjct: 121 CFGTGKTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSEAKGFGLQF 180

Query: 181 KDL 183
           KDL
Sbjct: 181 KDL 183

[Close]

BLAST of Csor.00g104290 vs. ExPASy TrEMBL
Match: A0A6J1JTD7 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111488703 PE=3 SV=1)

HSP 1 Score: 364 bits (935), Expect = 1.82e-126
Identity = 174/183 (95.08%), Postives = 181/183 (98.91%), Query Frame = 0


Query: 1   MANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVGRKNNTTSKGQVVGWP 60
           MANESLGLEITELRLGLPGNN+KNEKKRAYADI+DEDEPTRD VGRKNNTTSKGQVVGWP
Sbjct: 56  MANESLGLEITELRLGLPGNNNKNEKKRAYADIIDEDEPTRDSVGRKNNTTSKGQVVGWP 115

Query: 61  PVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFA 120
           PVCSYRKKNSFGEKESLLK+EN KMYVKISMDGAPFLRKLDLGSH+GYSDLA+ALEKLFA
Sbjct: 116 PVCSYRKKNSFGEKESLLKSENLKMYVKISMDGAPFLRKLDLGSHQGYSDLALALEKLFA 175

Query: 121 CFGTGKTSKHGESSNYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGFGLQF 180
           CFGTGKTSKHGESS+YVPIYEDKDGDWMLVGDVPWEMF+ESCKRLRIMKRSEAKGFGLQF
Sbjct: 176 CFGTGKTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSEAKGFGLQF 235

Query: 181 KDL 183
           KDL
Sbjct: 236 KDL 238

[Close]

BLAST of Csor.00g104290 vs. ExPASy TrEMBL
Match: A0A6J1L0Q4 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111498041 PE=3 SV=1)

HSP 1 Score: 324 bits (831), Expect = 2.62e-110
Identity = 158/183 (86.34%), Postives = 168/183 (91.80%), Query Frame = 0


Query: 1   MANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVGRKNNTTSKGQVVGWP 60
           M  E LGLEITELRLGLPGN +KNEKKRAY  IV EDEPTRD+V RKNN  SKGQVVGWP
Sbjct: 78  MEKEPLGLEITELRLGLPGNGEKNEKKRAYVAIVGEDEPTRDNVERKNNM-SKGQVVGWP 137

Query: 61  PVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFA 120
           PVCSYR+KNSF EKESL +N+NSK+YVKISMDGAPFLRKLDLGSH GYSDLA+ALEKLFA
Sbjct: 138 PVCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKLDLGSHNGYSDLALALEKLFA 197

Query: 121 CFGTGKTSKHGESSNYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGFGLQF 180
           CFGTGKTSKHG+ S+YVPIYEDKDGDWMLVGDVPWEMF +SCKRLRIMKRSEAKGFGLQF
Sbjct: 198 CFGTGKTSKHGKGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRLRIMKRSEAKGFGLQF 257

Query: 181 KDL 183
           KDL
Sbjct: 258 KDL 259

[Close]

BLAST of Csor.00g104290 vs. ExPASy TrEMBL
Match: A0A0A0KC02 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_7G440550 PE=3 SV=1)

HSP 1 Score: 320 bits (819), Expect = 1.85e-109
Identity = 165/194 (85.05%), Postives = 176/194 (90.72%), Query Frame = 0


Query: 1   MANESLGLEITELRLGL--PGNNDKNEKKRAYADIVDED-EPTRDD----VGRKN-NTTS 60
           MA ESLG EITELRLGL  PGN++KNEKKRA+ DIV+ D EPTRD+    VGRKN NTTS
Sbjct: 1   MAKESLGFEITELRLGLGLPGNSNKNEKKRAFDDIVNGDHEPTRDNDDNRVGRKNSNTTS 60

Query: 61  KGQVVGWPPVCSYRKKNSFGEKES---LLKNENSKMYVKISMDGAPFLRKLDLGSHEGYS 120
           KGQVVGWPPVCSYRK+NSFGEKES   L +NENSKMYVKISMDGAPFLRKLDLGSH+GYS
Sbjct: 61  KGQVVGWPPVCSYRKRNSFGEKESSSLLHENENSKMYVKISMDGAPFLRKLDLGSHKGYS 120

Query: 121 DLAVALEKLFACFGTGKTSKHGESSNYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMK 180
           DLA+ALEKLFACFGTGKT KHGES +YVPIYEDKDGDWMLVGDVPWEMF+ESCKRLRIMK
Sbjct: 121 DLALALEKLFACFGTGKTLKHGESCDYVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMK 180

Query: 181 RSEAKGFGLQFKDL 183
           RSEAKGFGLQFKDL
Sbjct: 181 RSEAKGFGLQFKDL 194

[Close]

BLAST of Csor.00g104290 vs. ExPASy TrEMBL
Match: A0A1S3CF19 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103499752 PE=3 SV=1)

HSP 1 Score: 311 bits (798), Expect = 2.95e-105
Identity = 164/194 (84.54%), Postives = 172/194 (88.66%), Query Frame = 0


Query: 1   MANESLGLEITELRLGL--PGNNDKNEKKRAYADIVDED-EPTRD--DVGRKN-NTTSKG 60
           MA ESLGL+ITELRLGL  PGN+DKNEKKRAY DIV+   EPTRD  DVGRKN N TSKG
Sbjct: 68  MAKESLGLDITELRLGLGLPGNSDKNEKKRAYNDIVNGGHEPTRDGDDVGRKNSNATSKG 127

Query: 61  QVVGWPPVCSYRKKNSFGEKESLL----KNENSKMYVKISMDGAPFLRKLDLGSHEGYSD 120
           QVVGWPPVCSYRK+NSFGEKES      +NENSKMYVKISMDGAPFLRKLDLGSH+ YSD
Sbjct: 128 QVVGWPPVCSYRKRNSFGEKESSSSLPHENENSKMYVKISMDGAPFLRKLDLGSHKDYSD 187

Query: 121 LAVALEKLFACFG-TGKTSKHGESSNYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMK 180
           LAVALEKLF CFG TGKT KHGES +YVPIYEDKDGDWMLVGDVPWEMF+ESCKRLRIMK
Sbjct: 188 LAVALEKLFGCFGSTGKTLKHGESCDYVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMK 247

Query: 181 RSEAKGFGLQFKDL 183
           RSEAKGFGLQFKDL
Sbjct: 248 RSEAKGFGLQFKDL 261

[Close]

BLAST of Csor.00g104290 vs. TAIR 10
Match: AT3G15540.1 (indole-3-acetic acid inducible 19 )

HSP 1 Score: 201.1 bits (510), Expect = 7.9e-52
Identity = 110/194 (56.70%), Postives = 132/194 (68.04%), Query Frame = 0


Query: 1   MANESLGLEITELRLGLPGNN--DKNEKKRAYADI--------VDEDE----PTRDDVGR 60
           M  E LGLEITELRLGLPG +  +K  KKRA+ ++         D+ E     +  D  +
Sbjct: 1   MEKEGLGLEITELRLGLPGRDVAEKMMKKRAFTEMNMTSSGSNSDQCESGVVSSGGDAEK 60

Query: 61  KNNT-TSKGQVVGWPPVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSH 120
            N++  +K QVVGWPPVCSYRKKNS  E  +    +    YVK+SMDG P+LRK+DLGS 
Sbjct: 61  VNDSPAAKSQVVGWPPVCSYRKKNSCKEAST---TKVGLGYVKVSMDGVPYLRKMDLGSS 120

Query: 121 EGYSDLAVALEKLFACFGTGKTSKHGESSNYVPIYEDKDGDWMLVGDVPWEMFMESCKRL 180
           +GY DLA AL+KLF   G G   K G++  YV IYEDKDGDWML GDVPW MF+ESCKRL
Sbjct: 121 QGYDDLAFALDKLFGFRGIGVALKDGDNCEYVTIYEDKDGDWMLAGDVPWGMFLESCKRL 180

[Close]

BLAST of Csor.00g104290 vs. TAIR 10
Match: AT1G52830.1 (indole-3-acetic acid 6 )

HSP 1 Score: 184.5 bits (467), Expect = 7.7e-47
Identity = 97/194 (50.00%), Postives = 120/194 (61.86%), Query Frame = 0


Query: 1   MANESLGLEITELRLGLPGNN--------DKNEKKRAYADIV-------DEDEPTRDDVG 60
           MA E L LEITELRLGLPG+N           +KKR  +D++       + +      V 
Sbjct: 1   MAKEGLALEITELRLGLPGDNYSEISVCGSSKKKKRVLSDMMTSSALDTENENSVVSSVE 60

Query: 61  RKNNTTSKGQVVGWPPVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSH 120
            ++    K Q VGWPPVCSYR+K +  E    +       YVK+SMDG P++RK+DLGS 
Sbjct: 61  DESLPVVKSQAVGWPPVCSYRRKKNNEEASKAIG------YVKVSMDGVPYMRKIDLGSS 120

Query: 121 EGYSDLAVALEKLFACFGTGKTSKHGESSNYVPIYEDKDGDWMLVGDVPWEMFMESCKRL 180
             Y +L   LE LF C G G  +K G+   Y+ IYEDKD DWMLVGDVPW+MF ESCKRL
Sbjct: 121 NSYINLVTVLENLFGCLGIG-VAKEGKKCEYIIIYEDKDRDWMLVGDVPWQMFKESCKRL 180

[Close]

BLAST of Csor.00g104290 vs. TAIR 10
Match: AT1G15580.1 (indole-3-acetic acid inducible 5 )

HSP 1 Score: 169.9 bits (429), Expect = 2.0e-42
Identity = 99/183 (54.10%), Postives = 116/183 (63.39%), Query Frame = 0


Query: 1   MANES--LGLEITELRLGLPGN-----NDKNEKKRAYADIVDEDEPTRDDVGRKNNTTSK 60
           MANES  LGLEITELRLGLPG+        + KKRA  ++         ++  K     K
Sbjct: 1   MANESNNLGLEITELRLGLPGDIVVSGESISGKKRASPEV---------EIDLKCEPAKK 60

Query: 61  GQVVGWPPVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAV 120
            QVVGWPPVCSYR+KNS    +S         YVK+S+DGA FLRK+DL  ++ Y DLA 
Sbjct: 61  SQVVGWPPVCSYRRKNSLERTKS--------SYVKVSVDGAAFLRKIDLEMYKCYQDLAS 120

Query: 121 ALEKLFACF-GTGKTSKHGESSNYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSE 176
           AL+ LF C+     T K  E    VPIYEDKDGDWML GDVPWEMF+ SCKRLRIMKRS 
Sbjct: 121 ALQILFGCYINFDDTLKESEC---VPIYEDKDGDWMLAGDVPWEMFLGSCKRLRIMKRSC 163

[Close]

BLAST of Csor.00g104290 vs. TAIR 10
Match: AT1G04240.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 164.9 bits (416), Expect = 6.3e-41
Identity = 91/187 (48.66%), Postives = 123/187 (65.78%), Query Frame = 0


Query: 3   NESLGLEITELRLGLPGNNDKNEKKRAYA--------DIVDEDEPTRDDVGRKNNTT--S 62
           +E + L+ TELRLGLPG ++  E K   +         +  + E   +   RK  T+   
Sbjct: 2   DEFVNLKETELRLGLPGTDNVCEAKERVSCCNNNNKRVLSTDTEKEIESSSRKTETSPPR 61

Query: 63  KGQVVGWPPVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLA 122
           K Q+VGWPPV SYR KN+   K++  ++E   +YVK+SMDGAP+LRK+DL  ++GYS+L 
Sbjct: 62  KAQIVGWPPVRSYR-KNNIQSKKNESEHEGQGIYVKVSMDGAPYLRKIDLSCYKGYSELL 121

Query: 123 VALEKLFACFGTGKTSKHG--ESSNYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKR 178
            ALE +F  F  G+  +    + S++VP YEDKDGDWML+GDVPWEMF+ +CKRLRIMK 
Sbjct: 122 KALEVMFK-FSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKG 181

[Close]

BLAST of Csor.00g104290 vs. TAIR 10
Match: AT5G43700.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 158.7 bits (400), Expect = 4.5e-39
Identity = 88/179 (49.16%), Postives = 115/179 (64.25%), Query Frame = 0


Query: 3   NESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVGRKNNTTS--KGQVVGWP 62
           +E + L+ TELRLGLPG  +     ++   ++ E      +   K  T S  K Q+VGWP
Sbjct: 8   DELVNLKATELRLGLPGTEETVSCGKSNKRVLPEATEKEIESTGKTETASPPKAQIVGWP 67

Query: 63  PVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFA 122
           PV SYRK N   +K    ++E    YVK+SMDGAP+LRK+DL  ++ Y +L  +LE +F 
Sbjct: 68  PVRSYRKNNVQTKKS---ESEGQGNYVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFK 127

Query: 123 CFGTGK-TSKHG-ESSNYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGFG 178
            F  G+   + G + S++VP YEDKDGDWMLVGDVPWEMF+ SCKRLRIMK SE KG G
Sbjct: 128 -FSVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGLG 182

The following BLAST results are available for this feature:

BLAST of Csor.00g104290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P13088	3.3e-63	65.79	Auxin-induced protein AUX22 OS=Glycine max OX=3847 GN=AUX22 PE=2 SV=1	[more]
P32293	2.0e-60	63.68	Auxin-induced protein 22A OS=Vigna radiata var. radiata OX=3916 GN=AUX22A PE=2 S...	[more]
O24541	7.2e-58	61.90	Auxin-induced protein 22C OS=Vigna radiata var. radiata OX=3916 GN=AUX22C PE=2 S...	[more]
P49680	1.8e-56	63.19	Auxin-induced protein IAA6 OS=Pisum sativum OX=3888 GN=IAA6 PE=2 SV=1	[more]
O24409	1.1e-50	56.70	Auxin-responsive protein IAA19 OS=Arabidopsis thaliana OX=3702 GN=IAA19 PE=1 SV=...	[more]

BLAST of Csor.00g104290 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6575564.1	8.58e-133	100.00	Auxin-induced protein AUX22, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7014105.1	3.51e-131	99.45	Auxin-induced protein AUX22, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
XP_022954061.1	9.64e-130	97.81	auxin-induced protein AUX22 [Cucurbita moschata]	[more]
XP_023549188.1	4.58e-127	96.72	LOW QUALITY PROTEIN: auxin-induced protein AUX22-like [Cucurbita pepo subsp. pep...	[more]
XP_022992376.1	3.76e-126	95.08	auxin-induced protein AUX22-like [Cucurbita maxima]	[more]

BLAST of Csor.00g104290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GPU1	4.67e-130	97.81	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111456436 PE=3 SV=1	[more]
A0A6J1JTD7	1.82e-126	95.08	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111488703 PE=3 SV=1	[more]
A0A6J1L0Q4	2.62e-110	86.34	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111498041 PE=3 SV=1	[more]
A0A0A0KC02	1.85e-109	85.05	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_7G440550 PE=3 SV=1	[more]
A0A1S3CF19	2.95e-105	84.54	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103499752 PE=3 SV=1	[more]

BLAST of Csor.00g104290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15540.1	7.9e-52	56.70	indole-3-acetic acid inducible 19	[more]
AT1G52830.1	7.7e-47	50.00	indole-3-acetic acid 6	[more]
AT1G15580.1	2.0e-42	54.10	indole-3-acetic acid inducible 5	[more]
AT1G04240.1	6.3e-41	48.66	AUX/IAA transcriptional regulator family protein	[more]
AT5G43700.1	4.5e-39	49.16	AUX/IAA transcriptional regulator family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 79..181 e-value: 8.4E-40 score: 136.9
None	No IPR available	PANTHER	PTHR31734:SF87	AUXIN-RESPONSIVE PROTEIN IAA6	coord: 4..176
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 80..169
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 43..176 e-value: 4.8E-51 score: 174.0
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 4..176
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 84..172 score: 24.791765

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g104290.m01	Csor.00g104290.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding