Csor.00g104160 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g104160
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionRNA polymerase II subunit 5-mediating protein homolog
LocationCsor_Chr20: 1053946 .. 1057061 (-)
RNA-Seq ExpressionCsor.00g104160
SyntenyCsor.00g104160
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGAGGAGGAGGAGGAGCAAAGGGAACGGTGGCGGCGCTGTCCTCATTATTTCCGGCACAGGATGCCCACAAAGCAGCGATGCGCGTCCAAGATGCGATTTCTGAGAAGCAGAGGGAGCTTGAGCATCTCCTTGGTTTCATCTCTGATAATGCTAACCTGATCAACCTTGTCCAGAAATTACCTGAAGAGCTGCACCATGAAGTCATGGTACTTTTGCTTCTTCCTTTGAGTTGGGTGTTGAGTGTTTTCAGCGTTGTTTTTCGATAGCAAAAGAAAATTTATTCGTGGGTTCGCTGTGATTGTTGTTTTGAAGGTTCCATTTGGGAAGGCGGCTTTCTTCCCGGGGCGTTTGGTTCATACTAACGAGTTTCTGGTAATGTATTGTACTCTCTTACAACTTCTGGGAAACTTATTCTCTGTATGATTGATAAAGAAGGGACAAGGGTATTATATGTTAGGACTCCACCCAACAATCCTCCCTTCGAACAAAGTACCCTGAGGCCTATGGAGCCCTCGAACAACCTTCCCTTAATCGACTCGACTCCTTCTCTGGAATTTTCAAACAAAGTACACCGGATTCTTTGAGCATAAGCTCTCGTGGCTTTGTTTTGGGCTTCCCCAAAGGAACTCATACCAATGGAGATGTATTCCTTACTTATAAACCCATGATCATTCCCTAAATTAGCCAATATGGGACACCCTCCCAACAATTCTCAACATTATAATACGCCCATGGATTCATTAAATAGATGTTCATATTGGTTTTCGAGCACATGAGAGTAGTTCCTATCGTTCTTCTTCTGTTCTATTAAATAGATGTTCACTCTTAACTACTCTCAAAGTTCATTGTTGAATCCCCTTGTACTGCTTTTAACTCTGTTGCAAAATTAAGGGAAAAAGAGAACATTATTGGGTTTAACTAGATCATTGTTTATGCTTTTGATCAAATGTTTGTGGCCGAGTTCTGGAAAGAATATGCGGTGAGGTTTACTTTTCAGAACGTCGAGTTGAGAACCGGACTTATCCATGTGCAGGTTCTTCTGGGAGAAGGTTATTATGCTGAGAGAACATCGAAACAAACAGTCGAGATCTTGAAAAGGAGAGGTAAAGCTTTGGATTCTCAAGTTGATTCTCTGAAGGCCATGATGGATGATCTTAAGGCTGAGGCCTCATTTTTTGATGCTACGGCGTCCGAAGCTGCGGTAAGCTTAGCAATTTATTGGTGAACTATATACCGTAACGTGAAGTTGATAAAAATTTGAGGTTTACCTAGAAGCTAGTACATGTATTTTTGTTGTATTTACCAGATTATCCTATGACGCCGATGTTGATGTTCTTTATATTGCTACCAGGAGGGTCTTGTCGAGATAACTGAGGAGTATGTGGAGGAAGACAATAATGAGCAGGAATCTGGATCAGGTCGGTTCTTATCCTCATCTCCATCCTATTGTTACATGTTAGGATTGACAATTTGGCATTGTAAGACATGTGAGCCCTTGTCTATCGTATTATATATATGAATAAATGTAACAGCTCAAGCCTACCGCTAGTAGATATTATTCGCTTTAGCCCATTACATATCGTTGTCTACCTCACGGTTTTAAAACGTGTCTACTAGGGAGAGGTTTCCACCCCCTTATAAGGAATGTTTCGTTCCTCTCTTCAACTGATGTGGGATCTCACAATCCACCCTCCTTGGGGGCTAGCATCCTCGCTGGCACACCGTTCGGTGTTTGGCTTTAATACCATTTGTAACCGCCCAAGCCCATTGCTAGCAAATATTGTCCACTTTAGCCCGTTACGTTTCGTTGTCAGCCTCAAGGTTTTAAAACGCGTTTGCTAGGGAGAGGTTTCCACACTCTTATAAGGAATGTTTCGTTCCCCTCTCCAACTGATGTGGGATCTCACAAAATAATGTACTTGGTTTTTGGAGTTGCCAAGCATGCATCATAATCACAGTCCGATGTTTATACGAACTACTTGTAAACACAGGTAAAACGGATGAATTACGATGATGTTATGTTTCTTTTCAGGAGTAAACAAGCAAGATGCTCCCAGTGTTTCTGGAGTTGATGAGGCAAGGATTACAGAAGAAGATGAAGAATATGCTCGTATAATGTCCAGATTGGATGAACTCGAGAAGGAGGAAGAACTTGCTGCCGCAAACGACAACCAAAACGATGAAGAAGGTGAGGAAGAGAATGAAACTTCAAATCAATCCTTGGAGAAGCTTCATGATGCTAAGCACAGCTATTCAAAGGTAGTGTCAGAATCAAATACCTTAGAGATTTAAAGCTCCCAGAAATGCATGGTTATCGACAAACTTACTCGATCAATTTGTGATGTATTGTTAACCATTTCTGATGATTGATCGCTTCGAAACATTCTCAGGCAAGTACATCTCCGTGTCGGAGGGATGAAGATATAGGTAGTAAAGAGCTACTGGATAAGTATCAGCAGCAACAACAAGAGGCTTCTACCAATCCATCAAATGTGACCAACCTCTTATTTGCTTTACTGTTTATTACTGTCTGTGTTCTTTGTTAAAACAGCATTCATTATTAAATCATGTATATATTCGTTATGCAGTGTTCAAATTTTTCAGAACAGTCTTCATCCAAAGGTTCGTTACATGGCAACAGTTCTTCGACTCAGACTCGGGGAATGAGAAACACTAATTCTGCTGCAAAGTCTGTAACATTTGCTGAAGTAAAAGAAAAGAATCAAACATTGCCTGCATCTACCAGTGAGGTACTTTCAAGCTTGTTTATTGTATAGATTCTTTAGCTGCCCTGTTCGTCTAAAGCTATGGATTTGTCCATAATTTTGAGGTTAGTTATAAGATTCGGCCTCGTTAATCCGTGTTGTGTCGTCTCTGTCGGGTGTAGGCTTTCACGGGATCCATTGTCGAGCGCCCTCCTATTGTGCCGAAAATTTCTAAACAAGAAACAGAAACCCCATTGCAGGTGGGTTTGCGTAGTTTACACCATTTTTATTGCCATCATTGTACTAGTTCATTCATTGATGCTAAAGCTAACTGTTGATTTGGGCAGCCTTCTGGTTCTCAACCTTCAAAACCAGTATCCAGGTTCAAGATGCAAAGAAGATAG

mRNA sequence

ATGGAAGGAGGAGGAGGAGGAGCAAAGGGAACGGTGGCGGCGCTGTCCTCATTATTTCCGGCACAGGATGCCCACAAAGCAGCGATGCGCGTCCAAGATGCGATTTCTGAGAAGCAGAGGGAGCTTGAGCATCTCCTTGGTTTCATCTCTGATAATGCTAACCTGATCAACCTTGTCCAGAAATTACCTGAAGAGCTGCACCATGAAGTCATGGTTCCATTTGGGAAGGCGGCTTTCTTCCCGGGGCGTTTGGTTCATACTAACGAGTTTCTGGTTCTTCTGGGAGAAGGTTATTATGCTGAGAGAACATCGAAACAAACAGTCGAGATCTTGAAAAGGAGAGGTAAAGCTTTGGATTCTCAAGTTGATTCTCTGAAGGCCATGATGGATGATCTTAAGGCTGAGGCCTCATTTTTTGATGCTACGGCGTCCGAAGCTGCGGAGGGTCTTGTCGAGATAACTGAGGAGTATGTGGAGGAAGACAATAATGAGCAGGAATCTGGATCAGGAGTAAACAAGCAAGATGCTCCCAGTGTTTCTGGAGTTGATGAGGCAAGGATTACAGAAGAAGATGAAGAATATGCTCGTATAATGTCCAGATTGGATGAACTCGAGAAGGAGGAAGAACTTGCTGCCGCAAACGACAACCAAAACGATGAAGAAGGTGAGGAAGAGAATGAAACTTCAAATCAATCCTTGGAGAAGCTTCATGATGCTAAGCACAGCTATTCAAAGGCAAGTACATCTCCGTGTCGGAGGGATGAAGATATAGGTAGTAAAGAGCTACTGGATAAGTATCAGCAGCAACAACAAGAGGCTTCTACCAATCCATCAAATTGTTCAAATTTTTCAGAACAGTCTTCATCCAAAGGTTCGTTACATGGCAACAGTTCTTCGACTCAGACTCGGGGAATGAGAAACACTAATTCTGCTGCAAAGTCTGTAACATTTGCTGAAGTAAAAGAAAAGAATCAAACATTGCCTGCATCTACCAGTGAGGCTTTCACGGGATCCATTGTCGAGCGCCCTCCTATTGTGCCGAAAATTTCTAAACAAGAAACAGAAACCCCATTGCAGCCTTCTGGTTCTCAACCTTCAAAACCAGTATCCAGGTTCAAGATGCAAAGAAGATAG

Coding sequence (CDS)

ATGGAAGGAGGAGGAGGAGGAGCAAAGGGAACGGTGGCGGCGCTGTCCTCATTATTTCCGGCACAGGATGCCCACAAAGCAGCGATGCGCGTCCAAGATGCGATTTCTGAGAAGCAGAGGGAGCTTGAGCATCTCCTTGGTTTCATCTCTGATAATGCTAACCTGATCAACCTTGTCCAGAAATTACCTGAAGAGCTGCACCATGAAGTCATGGTTCCATTTGGGAAGGCGGCTTTCTTCCCGGGGCGTTTGGTTCATACTAACGAGTTTCTGGTTCTTCTGGGAGAAGGTTATTATGCTGAGAGAACATCGAAACAAACAGTCGAGATCTTGAAAAGGAGAGGTAAAGCTTTGGATTCTCAAGTTGATTCTCTGAAGGCCATGATGGATGATCTTAAGGCTGAGGCCTCATTTTTTGATGCTACGGCGTCCGAAGCTGCGGAGGGTCTTGTCGAGATAACTGAGGAGTATGTGGAGGAAGACAATAATGAGCAGGAATCTGGATCAGGAGTAAACAAGCAAGATGCTCCCAGTGTTTCTGGAGTTGATGAGGCAAGGATTACAGAAGAAGATGAAGAATATGCTCGTATAATGTCCAGATTGGATGAACTCGAGAAGGAGGAAGAACTTGCTGCCGCAAACGACAACCAAAACGATGAAGAAGGTGAGGAAGAGAATGAAACTTCAAATCAATCCTTGGAGAAGCTTCATGATGCTAAGCACAGCTATTCAAAGGCAAGTACATCTCCGTGTCGGAGGGATGAAGATATAGGTAGTAAAGAGCTACTGGATAAGTATCAGCAGCAACAACAAGAGGCTTCTACCAATCCATCAAATTGTTCAAATTTTTCAGAACAGTCTTCATCCAAAGGTTCGTTACATGGCAACAGTTCTTCGACTCAGACTCGGGGAATGAGAAACACTAATTCTGCTGCAAAGTCTGTAACATTTGCTGAAGTAAAAGAAAAGAATCAAACATTGCCTGCATCTACCAGTGAGGCTTTCACGGGATCCATTGTCGAGCGCCCTCCTATTGTGCCGAAAATTTCTAAACAAGAAACAGAAACCCCATTGCAGCCTTCTGGTTCTCAACCTTCAAAACCAGTATCCAGGTTCAAGATGCAAAGAAGATAG

Protein sequence

MEGGGGGAKGTVAALSSLFPAQDAHKAAMRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMMDDLKAEASFFDATASEAAEGLVEITEEYVEEDNNEQESGSGVNKQDAPSVSGVDEARITEEDEEYARIMSRLDELEKEEELAAANDNQNDEEGEEENETSNQSLEKLHDAKHSYSKASTSPCRRDEDIGSKELLDKYQQQQQEASTNPSNCSNFSEQSSSKGSLHGNSSSTQTRGMRNTNSAAKSVTFAEVKEKNQTLPASTSEAFTGSIVERPPIVPKISKQETETPLQPSGSQPSKPVSRFKMQRR
Homology
BLAST of Csor.00g104160 vs. ExPASy Swiss-Prot
Match: Q54HG4 (RNA polymerase II subunit 5-mediating protein homolog OS=Dictyostelium discoideum OX=44689 GN=rmp PE=3 SV=2)

HSP 1 Score: 94.0 bits (232), Expect = 3.9e-18
Identity = 81/272 (29.78%), Postives = 142/272 (52.21%), Query Frame = 0

Query: 30  RVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLVHTNE 89
           + +  + E Q  +E L    +D   LI+ +Q LP+ L  ++MVP GK AFF G L +TNE
Sbjct: 9   KYEQKVVEYQDHIEELKSTKNDYKQLIDTLQHLPDTLQPKIMVPMGKLAFFEGNLKNTNE 68

Query: 90  FLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMMDDLKAEAS----FFDATASE 149
            L+LLG+ Y+A+R+SKQT++I++RR K +D+ ++ L+  +  LK   S       A   +
Sbjct: 69  ILILLGDNYFAKRSSKQTIDIIQRRDKDIDTSINDLREQIKGLKQRVSMTTDLSKALHEK 128

Query: 150 AAEGLVEITEEYVEEDNNEQESGSGVNKQDA-----PSVSGVDEARITEE-------DEE 209
             + +VEI EEY  ++  E+E       Q +      + +  D+ +  EE       DEE
Sbjct: 129 EYDNIVEIKEEYNSDEEREKEKKRKQKPQKSTTTTTTTTTSKDKPKTEEEKKKSKEMDEE 188

Query: 210 YARIMSRLDELEKEEELAAANDNQNDEEGEEENETSNQSLEKLHDAKHSYSKASTSPCRR 269
           + +++ RL  LE++E     N   +D + EE N+  N+ L+ +  +   Y   + +    
Sbjct: 189 FDKMLKRLSILEEKE-----NKMGDDYDEEEFNKKFNKKLD-ITGSDEEYDDDNYNNNND 248

Query: 270 DEDIGSKELLDKYQQQQQEASTNPSNCSNFSE 286
           D+D   ++   +Y Q++      P N SN+++
Sbjct: 249 DDDDNDEDDDREYYQEEGFEDEKPEN-SNYNK 273

BLAST of Csor.00g104160 vs. ExPASy Swiss-Prot
Match: O94763 (Unconventional prefoldin RPB5 interactor 1 OS=Homo sapiens OX=9606 GN=URI1 PE=1 SV=3)

HSP 1 Score: 82.8 bits (203), Expect = 9.1e-15
Identity = 76/275 (27.64%), Postives = 130/275 (47.27%), Query Frame = 0

Query: 21  AQDAHKAAMRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFF 80
           A D  +     +  ++  Q  ++H     +D   L   +  LP++L + +MVPFG  AF 
Sbjct: 27  APDVARLREEQEKVVTNCQERIQHWKKVDNDYNALRERLSTLPDKLSYNIMVPFGPFAFM 86

Query: 81  PGRLVHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMMDDLKAEASFFD 140
           PG+LVHTNE  VLLG+ ++A+ ++KQ V +++ R + +   +D LK +M + ++   F +
Sbjct: 87  PGKLVHTNEVTVLLGDNWFAKCSAKQAVGLVEHRKEHVRKTIDDLKKVMKNFESRVEFTE 146

Query: 141 --ATASEAAEGLVEITEEYVEEDNNEQESGSGVNKQDAPSVSGVDEARITEEDEEY---- 200
                S+AA  +V+I EE   +   + +          P  S + EA I  + +      
Sbjct: 147 DLQKMSDAAGDIVDIREEIKCDFEFKAKHRIAHKPHSKPKTSDIFEADIANDVKSKDLLA 206

Query: 201 -ARIMSRLDELEKEEELAAANDNQND---------EEGEEENETSNQSLEKLHDAKHSYS 260
              + +RL+ELE++EEL    D++ D            EEE E  N ++  +H    S+ 
Sbjct: 207 DKELWARLEELERQEELLGELDSKPDTVIANGEDTTSSEEEKEDRNTNVNAMHQVTDSH- 266

Query: 261 KASTSPCRRDEDIGSKELLDKYQQQQQEASTNPSN 280
               +PC +  D+ S E        Q   S N S+
Sbjct: 267 ----TPCHK--DVASSEPFSGQVNSQLNCSVNGSS 294

BLAST of Csor.00g104160 vs. ExPASy Swiss-Prot
Match: Q3TLD5 (Unconventional prefoldin RPB5 interactor OS=Mus musculus OX=10090 GN=Uri1 PE=1 SV=2)

HSP 1 Score: 72.4 bits (176), Expect = 1.2e-11
Identity = 68/260 (26.15%), Postives = 128/260 (49.23%), Query Frame = 0

Query: 12  VAALSSLFPAQDAHKAAMRVQD--AISEKQRELEHLLGFISDNANLINLVQKLPEELHHE 71
           +A  S+  P +    A +R +    ++  Q +++H     +D + L   ++ LP++L ++
Sbjct: 14  LAEASAAAPLRAPEVARLREEQEKVVTNCQEKIQHWEKVDNDYSALQERLRTLPDKLSYD 73

Query: 72  VMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMM 131
           VMVPFG  AF PG+LVHTNE  VLLG+ ++A+ ++KQ V +++ R + +   +D  K ++
Sbjct: 74  VMVPFGPLAFMPGKLVHTNEVTVLLGDNWFAKCSAKQAVGLVEHRKEHVRKTIDDFKKVL 133

Query: 132 DDLKAEASFFD--ATASEAAEGLVEITEEYVEEDNNEQESGSGVNKQDAPSVSGVDEARI 191
            + ++   F +     S+AA   V+I EE   +   + +          P  S + EA  
Sbjct: 134 KNFESRVEFTEDLQKMSDAAGDFVDIREEIKSDFEFKGKQRIAHKPHSKPKTSDIFEADF 193

Query: 192 -----TEEDEEYARIMSRLDELEKEEELAAANDNQNDE---------EGEEENETSNQSL 251
                 +   +   + +RL+ELE++EEL    +++ D            EEE E ++  +
Sbjct: 194 ENGVKPKNTFDADELWARLEELERQEELLGELESKPDTVIANGEDRVSSEEEKEGADTGV 253

Query: 252 EKLHDAKHSYSKASTSPCRR 254
             +     S   ++ S C+R
Sbjct: 254 NVVSPVTDS---SAASSCKR 270

BLAST of Csor.00g104160 vs. ExPASy Swiss-Prot
Match: Q3B7M7 (Unconventional prefoldin RPB5 interactor OS=Bos taurus OX=9913 GN=URI1 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.1e-11
Identity = 76/288 (26.39%), Postives = 132/288 (45.83%), Query Frame = 0

Query: 32  QDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLVHTNEFL 91
           +  ++  Q +++H     +D   L   +  LP++L + +MVPFG  AF PG+LVHTNE  
Sbjct: 30  EKVVTNCQEKIQHWKKVDNDYNALQERLSTLPDKLSYNIMVPFGPFAFMPGKLVHTNEVT 89

Query: 92  VLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMMDDLKAEASFFD--ATASEAAEG 151
           VLLG+ ++A+ ++KQ V +++ R + +   +D LK +M + ++   F +     S+AA  
Sbjct: 90  VLLGDNWFAKCSAKQAVGLVEHRKEHVRKTIDDLKKVMKNFESRVEFTEDLQKMSDAAGD 149

Query: 152 LVEITEEYVEEDNNEQESGSGVNKQDAPSVSGVDEARITEE--------DEEYARIMSRL 211
           +V+I EE   +   + +          P  S + EA    +        D+E   +  RL
Sbjct: 150 IVDIREEIKTDFEFKAKHRIAHKPHSKPKTSDIFEAEFANDLKSKDLLADKE---LWDRL 209

Query: 212 DELEKEEELAAAND----------NQNDEEGEEENETSNQSLEKLHDAKHSYSKASTSPC 271
           +ELE++EEL    D          N  D   EEE E  N ++  +H    S + +S    
Sbjct: 210 EELERQEELLGEIDIDSKPDTVIANGEDVSSEEEKEDQNINVNMMHQVTDSLALSSCY-- 269

Query: 272 RRDEDIGSKELLDKYQQQQQEASTNPSNCSNFSEQSSSKGSLHGNSSS 300
                + + EL +         S N S+  + +E         G+S +
Sbjct: 270 ---NSLTNSELFNGQVNSPLNYSVNGSSSYHSNEDDGDNNDDGGDSEN 309

BLAST of Csor.00g104160 vs. ExPASy Swiss-Prot
Match: Q9W148 (Unconventional prefoldin RPB5 interactor-like protein OS=Drosophila melanogaster OX=7227 GN=uri PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.6e-06
Identity = 73/246 (29.67%), Postives = 117/246 (47.56%), Query Frame = 0

Query: 34  AISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLVHTNEFLVL 93
           A+     E E    F  DN + I  + K  + L  EVMVP G+ A  PG L+HTNE LV 
Sbjct: 11  ALQTNASETERWEAFKRDNESTIRNLDKFAKNLSVEVMVPIGRKALMPGELIHTNELLVG 70

Query: 94  LGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMMDDL---KAEASFFDATASEAAEGL 153
             EGY++  +S +  EI + R K  + Q+  L A+ +DL   K    F +       +  
Sbjct: 71  HYEGYFSACSSHKAKEICQYRLKLAEEQLKKL-AVENDLWQKKLHTPFAEGAVPSGDQ-- 130

Query: 154 VEITEEYVEEDNNEQESGSGVNKQDAPSVSGVD-EARITEEDEEYARIMSRLDELEKEEE 213
           VEI E++ EE +N+  +      +       ++ EA   ++D E   ++ +L+E E  EE
Sbjct: 131 VEIVEDFNEESHNKWLAEHRKRMRQQKQKERLEREAEPVKKDNE---VLRKLEEREMMEE 190

Query: 214 LAAANDNQNDEEGEEENETSNQSLEKLHDAKHSYSKASTSPCRRDEDIGSKELLDKYQQQ 273
           L    DN ++   ++ ++  NQ  E L     S  K+ T   + +ED   K+L  + Q +
Sbjct: 191 LGLDPDNIDE---DQLHDMLNQ--EPLKSTNESSPKSLT---QEEEDELWKKLEAEEQNE 242

Query: 274 QQEAST 276
             E S+
Sbjct: 251 ADELSS 242

BLAST of Csor.00g104160 vs. NCBI nr
Match: KAG6570522.1 (RNA polymerase II subunit 5-mediating protein-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 692 bits (1785), Expect = 4.54e-250
Identity = 377/377 (100.00%), Postives = 377/377 (100.00%), Query Frame = 0

Query: 1   MEGGGGGAKGTVAALSSLFPAQDAHKAAMRVQDAISEKQRELEHLLGFISDNANLINLVQ 60
           MEGGGGGAKGTVAALSSLFPAQDAHKAAMRVQDAISEKQRELEHLLGFISDNANLINLVQ
Sbjct: 1   MEGGGGGAKGTVAALSSLFPAQDAHKAAMRVQDAISEKQRELEHLLGFISDNANLINLVQ 60

Query: 61  KLPEELHHEVMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDS 120
           KLPEELHHEVMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDS
Sbjct: 61  KLPEELHHEVMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDS 120

Query: 121 QVDSLKAMMDDLKAEASFFDATASEAAEGLVEITEEYVEEDNNEQESGSGVNKQDAPSVS 180
           QVDSLKAMMDDLKAEASFFDATASEAAEGLVEITEEYVEEDNNEQESGSGVNKQDAPSVS
Sbjct: 121 QVDSLKAMMDDLKAEASFFDATASEAAEGLVEITEEYVEEDNNEQESGSGVNKQDAPSVS 180

Query: 181 GVDEARITEEDEEYARIMSRLDELEKEEELAAANDNQNDEEGEEENETSNQSLEKLHDAK 240
           GVDEARITEEDEEYARIMSRLDELEKEEELAAANDNQNDEEGEEENETSNQSLEKLHDAK
Sbjct: 181 GVDEARITEEDEEYARIMSRLDELEKEEELAAANDNQNDEEGEEENETSNQSLEKLHDAK 240

Query: 241 HSYSKASTSPCRRDEDIGSKELLDKYQQQQQEASTNPSNCSNFSEQSSSKGSLHGNSSST 300
           HSYSKASTSPCRRDEDIGSKELLDKYQQQQQEASTNPSNCSNFSEQSSSKGSLHGNSSST
Sbjct: 241 HSYSKASTSPCRRDEDIGSKELLDKYQQQQQEASTNPSNCSNFSEQSSSKGSLHGNSSST 300

Query: 301 QTRGMRNTNSAAKSVTFAEVKEKNQTLPASTSEAFTGSIVERPPIVPKISKQETETPLQP 360
           QTRGMRNTNSAAKSVTFAEVKEKNQTLPASTSEAFTGSIVERPPIVPKISKQETETPLQP
Sbjct: 301 QTRGMRNTNSAAKSVTFAEVKEKNQTLPASTSEAFTGSIVERPPIVPKISKQETETPLQP 360

Query: 361 SGSQPSKPVSRFKMQRR 377
           SGSQPSKPVSRFKMQRR
Sbjct: 361 SGSQPSKPVSRFKMQRR 377

BLAST of Csor.00g104160 vs. NCBI nr
Match: XP_022943608.1 (RNA polymerase II subunit 5-mediating protein homolog [Cucurbita moschata] >XP_022943609.1 RNA polymerase II subunit 5-mediating protein homolog [Cucurbita moschata])

HSP 1 Score: 688 bits (1776), Expect = 1.15e-248
Identity = 375/377 (99.47%), Postives = 377/377 (100.00%), Query Frame = 0

Query: 1   MEGGGGGAKGTVAALSSLFPAQDAHKAAMRVQDAISEKQRELEHLLGFISDNANLINLVQ 60
           MEGGGGGAKGTVAALSSLFPAQDAHKAAMRVQDAISEKQRELEHLLGFISDNANLINLVQ
Sbjct: 3   MEGGGGGAKGTVAALSSLFPAQDAHKAAMRVQDAISEKQRELEHLLGFISDNANLINLVQ 62

Query: 61  KLPEELHHEVMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDS 120
           KLPEELHHEVMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDS
Sbjct: 63  KLPEELHHEVMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDS 122

Query: 121 QVDSLKAMMDDLKAEASFFDATASEAAEGLVEITEEYVEEDNNEQESGSGVNKQDAPSVS 180
           QVDSLKAMMDDLKAEASFFDATASEAAEGLVEITEEYVEEDN+EQESGSGVNKQDAPSVS
Sbjct: 123 QVDSLKAMMDDLKAEASFFDATASEAAEGLVEITEEYVEEDNSEQESGSGVNKQDAPSVS 182

Query: 181 GVDEARITEEDEEYARIMSRLDELEKEEELAAANDNQNDEEGEEENETSNQSLEKLHDAK 240
           GVDEARITEEDEEYARIMSRLDELEKEEELAAANDNQNDE+GEEENETSNQSLEKLHDAK
Sbjct: 183 GVDEARITEEDEEYARIMSRLDELEKEEELAAANDNQNDEKGEEENETSNQSLEKLHDAK 242

Query: 241 HSYSKASTSPCRRDEDIGSKELLDKYQQQQQEASTNPSNCSNFSEQSSSKGSLHGNSSST 300
           HSYSKASTSPCRRDEDIGSKELLDKYQQQQQEASTNPSNCSNFSEQSSSKGSLHGNSSST
Sbjct: 243 HSYSKASTSPCRRDEDIGSKELLDKYQQQQQEASTNPSNCSNFSEQSSSKGSLHGNSSST 302

Query: 301 QTRGMRNTNSAAKSVTFAEVKEKNQTLPASTSEAFTGSIVERPPIVPKISKQETETPLQP 360
           QTRGMRNTNSAAKSVTFAEVKEKNQTLPASTSEAFTGSIVERPPIVPKISKQETETPLQP
Sbjct: 303 QTRGMRNTNSAAKSVTFAEVKEKNQTLPASTSEAFTGSIVERPPIVPKISKQETETPLQP 362

Query: 361 SGSQPSKPVSRFKMQRR 377
           SGSQPSKPVSRFKMQRR
Sbjct: 363 SGSQPSKPVSRFKMQRR 379

BLAST of Csor.00g104160 vs. NCBI nr
Match: XP_023512548.1 (RNA polymerase II subunit 5-mediating protein homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 679 bits (1752), Expect = 5.23e-245
Identity = 369/377 (97.88%), Postives = 375/377 (99.47%), Query Frame = 0

Query: 1   MEGGGGGAKGTVAALSSLFPAQDAHKAAMRVQDAISEKQRELEHLLGFISDNANLINLVQ 60
           MEGGGGGAKGTVAALSSLFPAQDAHKAAMRVQDAIS+KQRELEHL GFISDNANLINLVQ
Sbjct: 3   MEGGGGGAKGTVAALSSLFPAQDAHKAAMRVQDAISDKQRELEHLRGFISDNANLINLVQ 62

Query: 61  KLPEELHHEVMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDS 120
           KLPEELHHEVMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDS
Sbjct: 63  KLPEELHHEVMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDS 122

Query: 121 QVDSLKAMMDDLKAEASFFDATASEAAEGLVEITEEYVEEDNNEQESGSGVNKQDAPSVS 180
           QVDSLKAMMDDLKAEASFFDATASEAAEGLVEITEEYVEEDN+EQESGSGVNKQDAPSVS
Sbjct: 123 QVDSLKAMMDDLKAEASFFDATASEAAEGLVEITEEYVEEDNSEQESGSGVNKQDAPSVS 182

Query: 181 GVDEARITEEDEEYARIMSRLDELEKEEELAAANDNQNDEEGEEENETSNQSLEKLHDAK 240
           GVDEARITEEDEEYARIMSRLDELEKEEELAAAN+NQNDEEGEEE ETSNQS+EKLHDAK
Sbjct: 183 GVDEARITEEDEEYARIMSRLDELEKEEELAAANNNQNDEEGEEEKETSNQSMEKLHDAK 242

Query: 241 HSYSKASTSPCRRDEDIGSKELLDKYQQQQQEASTNPSNCSNFSEQSSSKGSLHGNSSST 300
           HSYSKASTSPCRRDEDIGSKELLDKYQQQQQEASTNPSNCSNFSEQSSSKGSLHGN+SST
Sbjct: 243 HSYSKASTSPCRRDEDIGSKELLDKYQQQQQEASTNPSNCSNFSEQSSSKGSLHGNNSST 302

Query: 301 QTRGMRNTNSAAKSVTFAEVKEKNQTLPASTSEAFTGSIVERPPIVPKISKQETETPLQP 360
           QTRGMRNTNSAAKSVTFAEVKEKNQTLPASTSEAFTGSIVERPPI+PKISKQETETPLQP
Sbjct: 303 QTRGMRNTNSAAKSVTFAEVKEKNQTLPASTSEAFTGSIVERPPIMPKISKQETETPLQP 362

Query: 361 SGSQPSKPVSRFKMQRR 377
           SGSQPSKPVSRFKMQRR
Sbjct: 363 SGSQPSKPVSRFKMQRR 379

BLAST of Csor.00g104160 vs. NCBI nr
Match: XP_022985987.1 (RNA polymerase II subunit 5-mediating protein homolog [Cucurbita maxima] >XP_022985988.1 RNA polymerase II subunit 5-mediating protein homolog [Cucurbita maxima] >XP_022985989.1 RNA polymerase II subunit 5-mediating protein homolog [Cucurbita maxima])

HSP 1 Score: 668 bits (1724), Expect = 9.29e-241
Identity = 366/377 (97.08%), Postives = 373/377 (98.94%), Query Frame = 0

Query: 1   MEGGGGGAKGTVAALSSLFPAQDAHKAAMRVQDAISEKQRELEHLLGFISDNANLINLVQ 60
           MEG GGGAKGTVA+LSSLFPAQDAHKAAMRVQDAISEKQRELEHL GFISDNANLINLVQ
Sbjct: 3   MEG-GGGAKGTVASLSSLFPAQDAHKAAMRVQDAISEKQRELEHLRGFISDNANLINLVQ 62

Query: 61  KLPEELHHEVMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDS 120
           KLPEELHHEVMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDS
Sbjct: 63  KLPEELHHEVMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDS 122

Query: 121 QVDSLKAMMDDLKAEASFFDATASEAAEGLVEITEEYVEEDNNEQESGSGVNKQDAPSVS 180
           QVDSLKAMMDDLKAEASFFDATASEAAEGLVEITEEYVEE+N+EQESGSGVNKQDAPSVS
Sbjct: 123 QVDSLKAMMDDLKAEASFFDATASEAAEGLVEITEEYVEENNSEQESGSGVNKQDAPSVS 182

Query: 181 GVDEARITEEDEEYARIMSRLDELEKEEELAAANDNQNDEEGEEENETSNQSLEKLHDAK 240
           GVDEARITEEDEEYARIMSRLDELE+EEELAAANDNQNDEEGEEE ETSNQSLEKLHDAK
Sbjct: 183 GVDEARITEEDEEYARIMSRLDELEEEEELAAANDNQNDEEGEEEKETSNQSLEKLHDAK 242

Query: 241 HSYSKASTSPCRRDEDIGSKELLDKYQQQQQEASTNPSNCSNFSEQSSSKGSLHGNSSST 300
           HSYSKAST PC+RDEDIGSKELLDKYQQQQQEASTNPSNCSNFSEQSSSKGSLHGN+SST
Sbjct: 243 HSYSKASTFPCQRDEDIGSKELLDKYQQQQQEASTNPSNCSNFSEQSSSKGSLHGNNSST 302

Query: 301 QTRGMRNTNSAAKSVTFAEVKEKNQTLPASTSEAFTGSIVERPPIVPKISKQETETPLQP 360
           QTRGMRNTNSAAKSVTFAEVKEKNQTLPASTSEAFTGSIVERPPI+PKISKQETETPLQP
Sbjct: 303 QTRGMRNTNSAAKSVTFAEVKEKNQTLPASTSEAFTGSIVERPPIMPKISKQETETPLQP 362

Query: 361 SGSQPSKPVSRFKMQRR 377
           SGSQPSKPVSRFKMQRR
Sbjct: 363 SGSQPSKPVSRFKMQRR 378

BLAST of Csor.00g104160 vs. NCBI nr
Match: KAG7010380.1 (RNA polymerase II subunit 5-mediating protein-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 641 bits (1653), Expect = 5.54e-229
Identity = 360/389 (92.54%), Postives = 362/389 (93.06%), Query Frame = 0

Query: 1   MEGGGGGAKGTVAALSSLFPAQDAHKAAMRVQDAISEKQRELEHLLGFISDNANLINLVQ 60
           MEGGGGGAKGTVAALSSLFPAQDAHKAAMRVQDAISEKQRELEHL GFISDNANLINLVQ
Sbjct: 62  MEGGGGGAKGTVAALSSLFPAQDAHKAAMRVQDAISEKQRELEHLRGFISDNANLINLVQ 121

Query: 61  KLPEELHHEVMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDS 120
           KLPEELHHEVMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDS
Sbjct: 122 KLPEELHHEVMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDS 181

Query: 121 QVDSLKAMMDDLKAEASFFDATASEAAEGLVEITEEYVEEDNNEQESGSGVNKQDAPSVS 180
           QVDSLKAMMDDLKAEASFFDATASEAAEGLVEITEEYVEEDN+EQESGS           
Sbjct: 182 QVDSLKAMMDDLKAEASFFDATASEAAEGLVEITEEYVEEDNSEQESGS----------- 241

Query: 181 GVDEARITEEDEEYARIMSRLDELEKEEELAAANDNQNDEEGEEENETSNQSLEKLHDAK 240
            VDEARITEEDEEYARIMSRLDELEKEEELAAANDNQNDEEGEEE ETSNQSLEKLHDAK
Sbjct: 242 -VDEARITEEDEEYARIMSRLDELEKEEELAAANDNQNDEEGEEEKETSNQSLEKLHDAK 301

Query: 241 HSYSKASTSPCRRDEDIGSKELLDKYQQQQQEASTNPSN------------CSNFSEQSS 300
           HSYSKASTSPCRRDE+IGSKELLDKYQQQQQEASTNPSN            CSNFSEQSS
Sbjct: 302 HSYSKASTSPCRRDENIGSKELLDKYQQQQQEASTNPSNVTNLLFALLFITCSNFSEQSS 361

Query: 301 SKGSLHGNSSSTQTRGMRNTNSAAKSVTFAEVKEKNQTLPASTSEAFTGSIVERPPIVPK 360
           SKGSLHGNSSSTQTRGMRNTNSAAKSVTFAEVKEKNQTLPASTSEAFTGSIVERPPIVPK
Sbjct: 362 SKGSLHGNSSSTQTRGMRNTNSAAKSVTFAEVKEKNQTLPASTSEAFTGSIVERPPIVPK 421

Query: 361 ISKQETETPLQPSGSQPSKPVSRFKMQRR 377
           ISKQETETPLQPSG QPSKPVSRFKMQRR
Sbjct: 422 ISKQETETPLQPSGPQPSKPVSRFKMQRR 438

BLAST of Csor.00g104160 vs. ExPASy TrEMBL
Match: A0A6J1FUU9 (RNA polymerase II subunit 5-mediating protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111448325 PE=4 SV=1)

HSP 1 Score: 688 bits (1776), Expect = 5.58e-249
Identity = 375/377 (99.47%), Postives = 377/377 (100.00%), Query Frame = 0

Query: 1   MEGGGGGAKGTVAALSSLFPAQDAHKAAMRVQDAISEKQRELEHLLGFISDNANLINLVQ 60
           MEGGGGGAKGTVAALSSLFPAQDAHKAAMRVQDAISEKQRELEHLLGFISDNANLINLVQ
Sbjct: 3   MEGGGGGAKGTVAALSSLFPAQDAHKAAMRVQDAISEKQRELEHLLGFISDNANLINLVQ 62

Query: 61  KLPEELHHEVMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDS 120
           KLPEELHHEVMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDS
Sbjct: 63  KLPEELHHEVMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDS 122

Query: 121 QVDSLKAMMDDLKAEASFFDATASEAAEGLVEITEEYVEEDNNEQESGSGVNKQDAPSVS 180
           QVDSLKAMMDDLKAEASFFDATASEAAEGLVEITEEYVEEDN+EQESGSGVNKQDAPSVS
Sbjct: 123 QVDSLKAMMDDLKAEASFFDATASEAAEGLVEITEEYVEEDNSEQESGSGVNKQDAPSVS 182

Query: 181 GVDEARITEEDEEYARIMSRLDELEKEEELAAANDNQNDEEGEEENETSNQSLEKLHDAK 240
           GVDEARITEEDEEYARIMSRLDELEKEEELAAANDNQNDE+GEEENETSNQSLEKLHDAK
Sbjct: 183 GVDEARITEEDEEYARIMSRLDELEKEEELAAANDNQNDEKGEEENETSNQSLEKLHDAK 242

Query: 241 HSYSKASTSPCRRDEDIGSKELLDKYQQQQQEASTNPSNCSNFSEQSSSKGSLHGNSSST 300
           HSYSKASTSPCRRDEDIGSKELLDKYQQQQQEASTNPSNCSNFSEQSSSKGSLHGNSSST
Sbjct: 243 HSYSKASTSPCRRDEDIGSKELLDKYQQQQQEASTNPSNCSNFSEQSSSKGSLHGNSSST 302

Query: 301 QTRGMRNTNSAAKSVTFAEVKEKNQTLPASTSEAFTGSIVERPPIVPKISKQETETPLQP 360
           QTRGMRNTNSAAKSVTFAEVKEKNQTLPASTSEAFTGSIVERPPIVPKISKQETETPLQP
Sbjct: 303 QTRGMRNTNSAAKSVTFAEVKEKNQTLPASTSEAFTGSIVERPPIVPKISKQETETPLQP 362

Query: 361 SGSQPSKPVSRFKMQRR 377
           SGSQPSKPVSRFKMQRR
Sbjct: 363 SGSQPSKPVSRFKMQRR 379

BLAST of Csor.00g104160 vs. ExPASy TrEMBL
Match: A0A6J1J6D1 (RNA polymerase II subunit 5-mediating protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111483860 PE=4 SV=1)

HSP 1 Score: 668 bits (1724), Expect = 4.50e-241
Identity = 366/377 (97.08%), Postives = 373/377 (98.94%), Query Frame = 0

Query: 1   MEGGGGGAKGTVAALSSLFPAQDAHKAAMRVQDAISEKQRELEHLLGFISDNANLINLVQ 60
           MEG GGGAKGTVA+LSSLFPAQDAHKAAMRVQDAISEKQRELEHL GFISDNANLINLVQ
Sbjct: 3   MEG-GGGAKGTVASLSSLFPAQDAHKAAMRVQDAISEKQRELEHLRGFISDNANLINLVQ 62

Query: 61  KLPEELHHEVMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDS 120
           KLPEELHHEVMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDS
Sbjct: 63  KLPEELHHEVMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDS 122

Query: 121 QVDSLKAMMDDLKAEASFFDATASEAAEGLVEITEEYVEEDNNEQESGSGVNKQDAPSVS 180
           QVDSLKAMMDDLKAEASFFDATASEAAEGLVEITEEYVEE+N+EQESGSGVNKQDAPSVS
Sbjct: 123 QVDSLKAMMDDLKAEASFFDATASEAAEGLVEITEEYVEENNSEQESGSGVNKQDAPSVS 182

Query: 181 GVDEARITEEDEEYARIMSRLDELEKEEELAAANDNQNDEEGEEENETSNQSLEKLHDAK 240
           GVDEARITEEDEEYARIMSRLDELE+EEELAAANDNQNDEEGEEE ETSNQSLEKLHDAK
Sbjct: 183 GVDEARITEEDEEYARIMSRLDELEEEEELAAANDNQNDEEGEEEKETSNQSLEKLHDAK 242

Query: 241 HSYSKASTSPCRRDEDIGSKELLDKYQQQQQEASTNPSNCSNFSEQSSSKGSLHGNSSST 300
           HSYSKAST PC+RDEDIGSKELLDKYQQQQQEASTNPSNCSNFSEQSSSKGSLHGN+SST
Sbjct: 243 HSYSKASTFPCQRDEDIGSKELLDKYQQQQQEASTNPSNCSNFSEQSSSKGSLHGNNSST 302

Query: 301 QTRGMRNTNSAAKSVTFAEVKEKNQTLPASTSEAFTGSIVERPPIVPKISKQETETPLQP 360
           QTRGMRNTNSAAKSVTFAEVKEKNQTLPASTSEAFTGSIVERPPI+PKISKQETETPLQP
Sbjct: 303 QTRGMRNTNSAAKSVTFAEVKEKNQTLPASTSEAFTGSIVERPPIMPKISKQETETPLQP 362

Query: 361 SGSQPSKPVSRFKMQRR 377
           SGSQPSKPVSRFKMQRR
Sbjct: 363 SGSQPSKPVSRFKMQRR 378

BLAST of Csor.00g104160 vs. ExPASy TrEMBL
Match: A0A6J1D6F4 (RNA polymerase II subunit 5-mediating protein homolog isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018055 PE=4 SV=1)

HSP 1 Score: 523 bits (1347), Expect = 9.32e-184
Identity = 296/373 (79.36%), Postives = 330/373 (88.47%), Query Frame = 0

Query: 6   GGAKGTVAALSSLFPAQDAHKAAMRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEE 65
           GGAKGTV +LSSLFPA+DAHKAA RVQD +SEKQ+EL+ L GFISDNANLINLVQKLPEE
Sbjct: 4   GGAKGTVTSLSSLFPAEDAHKAAARVQDTLSEKQKELDCLRGFISDNANLINLVQKLPEE 63

Query: 66  LHHEVMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSL 125
           L+HEVMVPFGKAAFFPGRL+HTNEFLVLLGEGYYAERTSKQ VEILKRRGKALDSQVDSL
Sbjct: 64  LYHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQAVEILKRRGKALDSQVDSL 123

Query: 126 KAMMDDLKAEASFFDATASEAAEGLVEITEEYVEEDNNEQESGSGVNKQDAPSVSGVDEA 185
           KAMMDDLKAEASFFDATASEAAEGLVEI EEYVEE+++E+E  SGVNKQD  SV  VD+A
Sbjct: 124 KAMMDDLKAEASFFDATASEAAEGLVEIKEEYVEENSSEREPESGVNKQDVHSVPEVDKA 183

Query: 186 RITEEDEEYARIMSRLDELEKEEELAAANDNQNDEEGEEENETSNQSLEKLHDAKHSYSK 245
           +ITEEDEEYARIM+RLDELEKEEELAA NDNQ DEE EEE  TSNQSLEK HD +  +SK
Sbjct: 184 KITEEDEEYARIMARLDELEKEEELAAGNDNQGDEEDEEEKGTSNQSLEKFHDEELRFSK 243

Query: 246 ASTSPCRRDEDIGSKELLDKYQQQQQEASTNPSNCSNFSEQSSSKGSLHGNSSSTQTRGM 305
            STSP +R+++IGS+E L KYQQQ+ EAS +PSNC+  S QS ++ +LHGN+SSTQ   +
Sbjct: 244 TSTSPWQREKNIGSEEPLGKYQQQE-EASNDPSNCTGLSVQSLARDTLHGNNSSTQR--V 303

Query: 306 RNTNSAAKSVTFAEVKEKNQTLPASTSEAFTGSIVERPPIVPKISKQETETPLQ-PSGSQ 365
           RN +SAAKSVTFAE +EKNQTLP S+SEAFTGSI+ERPPI+ K SKQETETPLQ PS SQ
Sbjct: 304 RNPSSAAKSVTFAEAREKNQTLPPSSSEAFTGSIIERPPIISKTSKQETETPLQMPSSSQ 363

Query: 366 PSKPVSRFKMQRR 377
           PSKPVSRFKMQRR
Sbjct: 364 PSKPVSRFKMQRR 373

BLAST of Csor.00g104160 vs. ExPASy TrEMBL
Match: A0A6J1D7S6 (RNA polymerase II subunit 5-mediating protein homolog isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018055 PE=4 SV=1)

HSP 1 Score: 518 bits (1335), Expect = 6.46e-182
Identity = 296/374 (79.14%), Postives = 330/374 (88.24%), Query Frame = 0

Query: 6   GGAKGTVAALSSLFPAQDAHKAAMRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEE 65
           GGAKGTV +LSSLFPA+DAHKAA RVQD +SEKQ+EL+ L GFISDNANLINLVQKLPEE
Sbjct: 4   GGAKGTVTSLSSLFPAEDAHKAAARVQDTLSEKQKELDCLRGFISDNANLINLVQKLPEE 63

Query: 66  LHHEVMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSL 125
           L+HEVMVPFGKAAFFPGRL+HTNEFLVLLGEGYYAERTSKQ VEILKRRGKALDSQVDSL
Sbjct: 64  LYHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQAVEILKRRGKALDSQVDSL 123

Query: 126 KAMMDDLKAEASFFDATASEAAEGLVEITEEYVEEDNNEQESGSGVNKQDAPSVSGVDEA 185
           KAMMDDLKAEASFFDATASEAAEGLVEI EEYVEE+++E+E  SGVNKQD  SV  VD+A
Sbjct: 124 KAMMDDLKAEASFFDATASEAAEGLVEIKEEYVEENSSEREPESGVNKQDVHSVPEVDKA 183

Query: 186 RITEEDEEYARIMSRLDELEKEEELAAANDNQNDEEGEEENETSNQSLEKLHDAKHSYSK 245
           +ITEEDEEYARIM+RLDELEKEEELAA NDNQ DEE EEE  TSNQSLEK HD +  +SK
Sbjct: 184 KITEEDEEYARIMARLDELEKEEELAAGNDNQGDEEDEEEKGTSNQSLEKFHDEELRFSK 243

Query: 246 ASTSPCRRDEDIGSKELLDKYQQQQQEASTNPSNCSNFSEQSSSK-GSLHGNSSSTQTRG 305
            STSP +R+++IGS+E L KYQQQ+ EAS +PSNC+  S QS ++  +LHGN+SSTQ   
Sbjct: 244 TSTSPWQREKNIGSEEPLGKYQQQE-EASNDPSNCTGLSVQSLAREDTLHGNNSSTQR-- 303

Query: 306 MRNTNSAAKSVTFAEVKEKNQTLPASTSEAFTGSIVERPPIVPKISKQETETPLQ-PSGS 365
           +RN +SAAKSVTFAE +EKNQTLP S+SEAFTGSI+ERPPI+ K SKQETETPLQ PS S
Sbjct: 304 VRNPSSAAKSVTFAEAREKNQTLPPSSSEAFTGSIIERPPIISKTSKQETETPLQMPSSS 363

Query: 366 QPSKPVSRFKMQRR 377
           QPSKPVSRFKMQRR
Sbjct: 364 QPSKPVSRFKMQRR 374

BLAST of Csor.00g104160 vs. ExPASy TrEMBL
Match: A0A1S4DX32 (RNA polymerase II subunit 5-mediating protein homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490540 PE=4 SV=1)

HSP 1 Score: 511 bits (1315), Expect = 7.37e-179
Identity = 293/373 (78.55%), Postives = 318/373 (85.25%), Query Frame = 0

Query: 6   GGAKGTVAALSSLFPAQDAHKAAMRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEE 65
           G  KGTV  LSSLFPAQDA KAA RVQ AISE Q++LE L GFI+DN N+I LVQKLPEE
Sbjct: 4   GRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEE 63

Query: 66  LHHEVMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSL 125
           LHHEVMVPFGKAAFFPGRL+HTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSL
Sbjct: 64  LHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSL 123

Query: 126 KAMMDDLKAEASFFDATASEAAEGLVEITEEYVEEDNNEQESGSGVNKQDAPSVSGVDEA 185
           KA MD+LKAEASFFDATASEA EGLVEI EEYVEE+  EQE  SGVNKQD   VSGVDEA
Sbjct: 124 KATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEA 183

Query: 186 RITEEDEEYARIMSRLDELEKEEELAAANDNQNDEEGEEENETSNQSLEKLHDAKHSYSK 245
           +I E D EYAR+M+R DELEKEEELAAAN N++D+E EEE ET NQSLEK +D K SYS+
Sbjct: 184 KIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSE 243

Query: 246 ASTSPCRRDEDIGSKELLDKYQQQQQEASTNPSNCSNFSEQSSSKGSL-HGNSSSTQTRG 305
            STS   RDE++ SKELLDKYQ+QQ EASTNPSNCS  S QSS K  +  GNSS TQ++ 
Sbjct: 244 GSTSAWLRDENVSSKELLDKYQKQQ-EASTNPSNCSGLSVQSSPKEDVTSGNSSLTQSQR 303

Query: 306 MRNTNSAAKSVTFAEVKEKNQTLPASTSEAFTGSIVERPPIVPKISKQETETPLQPSGSQ 365
           +RN N AAKSV FAEVKEK QTLP STS+AFTGSI+ERPPI+PK SKQETETPLQPSGSQ
Sbjct: 304 VRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQ 363

Query: 366 PSKPVSRFKMQRR 377
           PSKPVSRFKMQRR
Sbjct: 364 PSKPVSRFKMQRR 375

BLAST of Csor.00g104160 vs. TAIR 10
Match: AT1G03760.1 (Prefoldin chaperone subunit family protein )

HSP 1 Score: 205.7 bits (522), Expect = 6.6e-53
Identity = 160/402 (39.80%), Postives = 220/402 (54.73%), Query Frame = 0

Query: 8   AKGTVAALSSLFPAQDAHKAAMRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELH 67
           AKGTV  L   F  +D  KAA  +++ I EK+ E+  L  ++ +N NLINLV+KLP++LH
Sbjct: 5   AKGTVTPLG--FSEEDVRKAASYMEEKIGEKRVEMNRLQQYVDENDNLINLVKKLPDQLH 64

Query: 68  HEVMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKA 127
           H VMVPFGK AFFPGRL+HTNE LVLLGE YY +R+SKQTV+ LKRR K L SQ+ SLKA
Sbjct: 65  HNVMVPFGKMAFFPGRLIHTNECLVLLGENYYTDRSSKQTVDFLKRRDKTLQSQIHSLKA 124

Query: 128 MMDDLKAEASFFDATASEAAEGLVEITEEYVEEDNNEQESGSGVNKQDAPSVSG-VDEAR 187
            ++DL+ EASFF  TASE A+GLVEI EEYVEED++         K+      G  +E  
Sbjct: 125 EIEDLQTEASFFTTTASEVADGLVEIREEYVEEDSSAPVVIHSSEKEPCNLSEGETEEGE 184

Query: 188 ITEEDEEYARIMSRLDELEKEEELAAANDNQNDEEGEEENETSNQSLEKLHDAKHSYSKA 247
           +  ED+++ARIM+RL+ELE EEEL         E+G+   E  + S+E +   +H   K 
Sbjct: 185 L--EDDDFARIMARLNELEIEEEL-------EGEDGDSRGEDPDSSVESVEQIQHDLVKG 244

Query: 248 STSPCRRDE-DIGSKELLDKYQQQQQEASTNP---------------------------- 307
           S     R   + G +E       +    S++P                            
Sbjct: 245 SRGETDRGRVEYGKQETTISVPNKASGHSSSPRVSEPRVEAKIIQVLPETHPHKDLDDPL 304

Query: 308 SNCSNFSEQSSSKGSLHGNSSSTQTRGMRNTNSAAKSVTFAEVK-EKNQTLPA-STSEAF 367
           +     ++  S +G   G +        ++  + AK+      K E  +  P   +++AF
Sbjct: 305 NRIRPMAQYLSKEGQSRGGTPQQNAETWKDFRTNAKTNVLGPQKIEPQKPEPEFDSTKAF 364

Query: 368 TGSIVERPPIVPKISKQETETPLQPSGSQPSKPVSRFKMQRR 378
           TGSIVE   I+   +  +T    Q S SQPSKPVSRF+ +RR
Sbjct: 365 TGSIVEHAHILETSAHSQT----QSSTSQPSKPVSRFRAKRR 391

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q54HG43.9e-1829.78RNA polymerase II subunit 5-mediating protein homolog OS=Dictyostelium discoideu... [more]
O947639.1e-1527.64Unconventional prefoldin RPB5 interactor 1 OS=Homo sapiens OX=9606 GN=URI1 PE=1 ... [more]
Q3TLD51.2e-1126.15Unconventional prefoldin RPB5 interactor OS=Mus musculus OX=10090 GN=Uri1 PE=1 S... [more]
Q3B7M72.1e-1126.39Unconventional prefoldin RPB5 interactor OS=Bos taurus OX=9913 GN=URI1 PE=2 SV=1[more]
Q9W1481.6e-0629.67Unconventional prefoldin RPB5 interactor-like protein OS=Drosophila melanogaster... [more]
Match NameE-valueIdentityDescription
KAG6570522.14.54e-250100.00RNA polymerase II subunit 5-mediating protein-like protein, partial [Cucurbita a... [more]
XP_022943608.11.15e-24899.47RNA polymerase II subunit 5-mediating protein homolog [Cucurbita moschata] >XP_0... [more]
XP_023512548.15.23e-24597.88RNA polymerase II subunit 5-mediating protein homolog [Cucurbita pepo subsp. pep... [more]
XP_022985987.19.29e-24197.08RNA polymerase II subunit 5-mediating protein homolog [Cucurbita maxima] >XP_022... [more]
KAG7010380.15.54e-22992.54RNA polymerase II subunit 5-mediating protein-like protein, partial [Cucurbita a... [more]
Match NameE-valueIdentityDescription
A0A6J1FUU95.58e-24999.47RNA polymerase II subunit 5-mediating protein homolog OS=Cucurbita moschata OX=3... [more]
A0A6J1J6D14.50e-24197.08RNA polymerase II subunit 5-mediating protein homolog OS=Cucurbita maxima OX=366... [more]
A0A6J1D6F49.32e-18479.36RNA polymerase II subunit 5-mediating protein homolog isoform X2 OS=Momordica ch... [more]
A0A6J1D7S66.46e-18279.14RNA polymerase II subunit 5-mediating protein homolog isoform X1 OS=Momordica ch... [more]
A0A1S4DX327.37e-17978.55RNA polymerase II subunit 5-mediating protein homolog isoform X1 OS=Cucumis melo... [more]
Match NameE-valueIdentityDescription
AT1G03760.16.6e-5339.80Prefoldin chaperone subunit family protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 187..214
NoneNo IPR availableCOILSCoilCoilcoord: 115..135
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..377
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..262
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 263..337
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..191
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 352..370
NoneNo IPR availablePANTHERPTHR15111RNA POLYMERASE II SUBUNIT 5-MEDIATING PROTEIN NNX3coord: 8..377
NoneNo IPR availableCDDcd00584Prefoldin_alphacoord: 35..147
e-value: 1.11295E-22
score: 90.3667
NoneNo IPR availableSUPERFAMILY46579Prefoldincoord: 32..139
IPR004127Prefoldin alpha-likePFAMPF02996Prefoldincoord: 32..146
e-value: 2.6E-24
score: 85.4
IPR004127Prefoldin alpha-likeTIGRFAMTIGR00293TIGR00293coord: 27..145
e-value: 2.3E-16
score: 58.0
IPR009053PrefoldinGENE3D1.10.287.370coord: 22..148
e-value: 1.2E-23
score: 85.5

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g104160.m01Csor.00g104160.m01mRNA