Csor.00g103900 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g103900
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Small ubiquitin-related modifier
Location	Csor_Chr20: 1179624 .. 1181487 (-)
RNA-Seq Expression	Csor.00g103900
Synteny	Csor.00g103900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGGGGTCACGAACACGCAGCAGGAGGAAGACAAAAAGCCCAACGATCAATCTGCGCATATCAATCTGAAGGTCAAAGGCCAGGTTGGTTGGTTTCTTTCTGGAGGAATTAAGTTCATGCTTGAAGGTTTTATTGCTGATATTTCTTTAATGTGTTTGTTGTCTGTTGATGTTTTCTGGCTTTTTCCTTCTCTTTTCTCTCTCTTTCTACTGTTGAATCGCTTTTTGGTTGTTACGGAAAATTGAATCCCGAAAATGAAAAAAAATGTTCATCTAATTATGTTTTGTTCTTTTTTTTTTTTTTTTTTTTTTTCCTTCGAAACTTTCTTTCTCAGAATCTAGCCAAGTCAATTAATTGATAGGTGGAATTATAGTTTCCATTTGTTTTTGTAAGATTTGCAGTTTCGGTCGCATTCAGACTGTTCCATTTTTCTTTTTGTTTGTTATACTCACTCTGGGTAGCAAAATCCTGTCGTAGCTTTGATTGTTCTTTTGACGAATACTTCGTAGGTGCCATGCTGCTTAAGTACTTCTGGGTTACTTGGGAATGAATTTGACATAGATGATCAAGACCGAGTGCTGGTCCTCCTGTCCTGTCCTTGATAATCTATTGATTCTTTGATATTCTTCTAATTTACTTTTCATTGGGATGGATTTGCCACTTGTGGATTGAATACCTGCTGGGTTGTGGCCTTACCGAGTATTGACTGCACATTTACTTTTTTGATCTTTTAAATAGGGCTTTTGGGGTGTTTTTTTAGCTTGAATACATGAGCATTTGTGGGTTTTCTCTGAAATTTGGTTGTATTCTTTTGTTCATTTTGTTTGAATACATTACGAAATGGATTTTTTCACTATCACTTCCAATGGAGTGGTTTTAATGTATTTTAAAAATTCATGTAAATGTGTTCTAAACCAAGCCTTAAAAAATAGAATGGATTTTCTAAGCTTCTATGAGTTGGAGTTTCTCACAATTCTTTCACTATTTCAACGAAAGGATCAGTTGGGCCATTAAATTAAATAAGAATAGTACTGTAAAGTCTGGCACATGCCTAAGCAGCAGAAGAATTAAGACAGTCTATCAGCCATCTTAATAGTCAATACATGCCATGGAAATGTACATCTGTGTGGTTTTAATTCTTTTTTAAACCTTGAGAAGAATGCTGCTTTGTGGTCTTCGTTGTGATTATTGATACAAATGGCAGTGAATTGAGTGGACGATCGGTTTAATCCATGTATTGAGTTATTTTTTTTACTAAGGCTAGGAAGAGCAAGGAGATTGAAAGTGCTTATGAATGCTCAGCTCCATTTTTCTGTCCCAAAATTTTCTATCTTGGAGTGATTGATCCAATGTGTTAATCTTCATGGTTAATACATTCCACGGAAATAATTTTCTTGATCTTCCTATTGTAGGATTCCTTTTGTGGGCTTATTTTTGATATGCCTTATTGCATTGTTTCACTTTTCTCCATCAAAGTTTGTTTCTTTACCAAAAAATTATGGGTTTGTATTTGTGAAAGACTAACCTCTTAATTCTGAAATTTTGATTTCCTATAGGATGGGAACGAGGTGTTCTTCAGGATTAAAAGGAGCACTCAGCTGAAGAAACTAATGAATGCTTACTGTGATCGACAATCTGTGGATCTGAACTCCATTGCTTTTCTATTCGATGGTCGTCGTCTTCGAGCAGAGCAAACTCCCGACGAGGTATCCCTTTCCCTGATATTAGCACCCCATTAGATACCCTAATATTAAAATTCATGAATTTTTAGTAAAAGCATGTAATTTTTACCAGCTAGAGATGGAGGATGGGGATGAGATTGATGCAATGTTGCACCAGACAGGTGGATCCAGTGGTTGA

mRNA sequence

ATGTCGGGGGTCACGAACACGCAGCAGGAGGAAGACAAAAAGCCCAACGATCAATCTGCGCATATCAATCTGAAGGTCAAAGGCCAGGATGGGAACGAGGTGTTCTTCAGGATTAAAAGGAGCACTCAGCTGAAGAAACTAATGAATGCTTACTGTGATCGACAATCTGTGGATCTGAACTCCATTGCTTTTCTATTCGATGGTCGTCGTCTTCGAGCAGAGCAAACTCCCGACGAGCTAGAGATGGAGGATGGGGATGAGATTGATGCAATGTTGCACCAGACAGGTGGATCCAGTGGTTGA

Coding sequence (CDS)

ATGTCGGGGGTCACGAACACGCAGCAGGAGGAAGACAAAAAGCCCAACGATCAATCTGCGCATATCAATCTGAAGGTCAAAGGCCAGGATGGGAACGAGGTGTTCTTCAGGATTAAAAGGAGCACTCAGCTGAAGAAACTAATGAATGCTTACTGTGATCGACAATCTGTGGATCTGAACTCCATTGCTTTTCTATTCGATGGTCGTCGTCTTCGAGCAGAGCAAACTCCCGACGAGCTAGAGATGGAGGATGGGGATGAGATTGATGCAATGTTGCACCAGACAGGTGGATCCAGTGGTTGA

Protein sequence

MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG

Homology

[Close]

BLAST of Csor.00g103900 vs. ExPASy Swiss-Prot
Match: P55852 (Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1 SV=2)

HSP 1 Score: 174.9 bits (442), Expect = 4.7e-43
Identity = 86/95 (90.53%), Postives = 89/95 (93.68%), Query Frame = 0


Query: 6   NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFL 65
           +  QEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFL
Sbjct: 2   SANQEEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFL 61

Query: 66  FDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG 101
           FDGRRLRAEQTPDEL+MEDGDEIDAMLHQTGGS G
Sbjct: 62  FDGRRLRAEQTPDELDMEDGDEIDAMLHQTGGSGG 96

[Close]

BLAST of Csor.00g103900 vs. ExPASy Swiss-Prot
Match: Q9FLP6 (Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 2.6e-41
Identity = 85/90 (94.44%), Postives = 86/90 (95.56%), Query Frame = 0


Query: 10  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 69
           EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGR
Sbjct: 6   EEDKKP-DQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFDGR 65

Query: 70  RLRAEQTPDELEMEDGDEIDAMLHQTGGSS 100
           RLRAEQTPDELEMEDGDEIDAMLHQTGG +
Sbjct: 66  RLRAEQTPDELEMEDGDEIDAMLHQTGGGA 94

[Close]

BLAST of Csor.00g103900 vs. ExPASy Swiss-Prot
Match: P55857 (Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SUMO1 PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.2e-38
Identity = 81/91 (89.01%), Postives = 83/91 (91.21%), Query Frame = 0


Query: 10 EEDKKP---NDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLF 69
          EEDKKP       AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+N+IAFLF
Sbjct: 6  EEDKKPAGGEGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNAIAFLF 65

Query: 70 DGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 98
          DGRRLR EQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 66 DGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 96

[Close]

BLAST of Csor.00g103900 vs. ExPASy Swiss-Prot
Match: O13351 (Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pmt3 PE=1 SV=2)

HSP 1 Score: 107.1 bits (266), Expect = 1.2e-22
Identity = 52/93 (55.91%), Postives = 68/93 (73.12%), Query Frame = 0


Query: 5   TNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAF 64
           T    ++D KP+ +  HINLKV GQD NEVFF+IK++T+  KLM  YC RQ   +NS+ F
Sbjct: 21  TGDTSQQDVKPSTE--HINLKVVGQDNNEVFFKIKKTTEFSKLMKIYCARQGKSMNSLRF 80

Query: 65  LFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 98
           L DG R+R +QTP EL+MEDGD+I+A+L Q GG
Sbjct: 81  LVDGERIRPDQTPAELDMEDGDQIEAVLEQLGG 111

[Close]

BLAST of Csor.00g103900 vs. ExPASy Swiss-Prot
Match: Q9FLP5 (Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana OX=3702 GN=SUMO3 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 9.5e-20
Identity = 49/89 (55.06%), Postives = 64/89 (71.91%), Query Frame = 0


Query: 11 EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDG 70
          +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G
Sbjct: 5  QDDKPIDQEQEAHVILKVKSQDGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFIFNG 64

Query: 71 RRLRAEQTPDELEMEDGDEIDAMLHQTGG 98
           R+   +TPDEL+MEDGD IDA    +GG
Sbjct: 65 ARIGGLETPDELDMEDGDVIDACRAMSGG 93

[Close]

BLAST of Csor.00g103900 vs. NCBI nr
Match: XP_022943304.1 (small ubiquitin-related modifier 1 [Cucurbita moschata] >XP_022944672.1 small ubiquitin-related modifier 1 [Cucurbita moschata] >XP_022986048.1 small ubiquitin-related modifier 1 [Cucurbita maxima] >XP_023512038.1 small ubiquitin-related modifier 1 [Cucurbita pepo subsp. pepo] >XP_023513384.1 small ubiquitin-related modifier 1 [Cucurbita pepo subsp. pepo] >KAG6570547.1 Small ubiquitin-related modifier 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010405.1 Small ubiquitin-related modifier 2 [Cucurbita argyrosperma subsp. argyrosperma] >KAG7010406.1 Small ubiquitin-related modifier 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 197 bits (501), Expect = 1.68e-63
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG 100
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG 100

[Close]

BLAST of Csor.00g103900 vs. NCBI nr
Match: XP_008456407.1 (PREDICTED: small ubiquitin-related modifier 1 [Cucumis melo] >KAA0054458.1 small ubiquitin-related modifier 1 [Cucumis melo var. makuwa] >TYK14581.1 small ubiquitin-related modifier 1 [Cucumis melo var. makuwa])

HSP 1 Score: 195 bits (496), Expect = 9.74e-63
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
          MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99
          SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS
Sbjct: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]

BLAST of Csor.00g103900 vs. NCBI nr
Match: XP_022986050.1 (small ubiquitin-related modifier 1-like [Cucurbita maxima])

HSP 1 Score: 195 bits (495), Expect = 1.38e-62
Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVTNT QEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTPQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG 100
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG 100

[Close]

BLAST of Csor.00g103900 vs. NCBI nr
Match: XP_004150752.1 (small ubiquitin-related modifier 1 [Cucumis sativus] >XP_038902909.1 small ubiquitin-related modifier 1-like [Benincasa hispida] >KGN46994.1 hypothetical protein Csa_020805 [Cucumis sativus])

HSP 1 Score: 194 bits (493), Expect = 2.79e-62
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
          MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99
          SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 99

[Close]

BLAST of Csor.00g103900 vs. NCBI nr
Match: XP_022970791.1 (small ubiquitin-related modifier 1-like [Cucurbita maxima] >XP_023533825.1 small ubiquitin-related modifier 1-like [Cucurbita pepo subsp. pepo] >KAG6604755.1 Small ubiquitin-related modifier 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034883.1 Small ubiquitin-related modifier 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 192 bits (488), Expect = 2.09e-61
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 1  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
          MSGV NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1  MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99
          SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 99

[Close]

BLAST of Csor.00g103900 vs. ExPASy TrEMBL
Match: A0A6J1FTW7 (Small ubiquitin-related modifier OS=Cucurbita moschata OX=3662 GN=LOC111448116 PE=3 SV=1)

HSP 1 Score: 197 bits (501), Expect = 8.14e-64
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG 100
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG 100

[Close]

BLAST of Csor.00g103900 vs. ExPASy TrEMBL
Match: A0A6J1JFC9 (Small ubiquitin-related modifier OS=Cucurbita maxima OX=3661 GN=LOC111483904 PE=3 SV=1)

HSP 1 Score: 197 bits (501), Expect = 8.14e-64
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG 100
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG 100

[Close]

BLAST of Csor.00g103900 vs. ExPASy TrEMBL
Match: A0A5A7UHK7 (Small ubiquitin-related modifier OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00760 PE=3 SV=1)

HSP 1 Score: 195 bits (496), Expect = 4.72e-63
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
          MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99
          SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS
Sbjct: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]

BLAST of Csor.00g103900 vs. ExPASy TrEMBL
Match: A0A1S3C3V0 (Small ubiquitin-related modifier OS=Cucumis melo OX=3656 GN=LOC103496358 PE=3 SV=1)

HSP 1 Score: 195 bits (496), Expect = 4.72e-63
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
          MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99
          SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS
Sbjct: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]

BLAST of Csor.00g103900 vs. ExPASy TrEMBL
Match: A0A6J1JCZ0 (Small ubiquitin-related modifier OS=Cucurbita maxima OX=3661 GN=LOC111483905 PE=3 SV=1)

HSP 1 Score: 195 bits (495), Expect = 6.70e-63
Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVTNT QEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTPQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG 100
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG 100

[Close]

BLAST of Csor.00g103900 vs. TAIR 10
Match: AT4G26840.1 (small ubiquitin-like modifier 1 )

HSP 1 Score: 174.9 bits (442), Expect = 3.3e-44
Identity = 86/95 (90.53%), Postives = 89/95 (93.68%), Query Frame = 0


Query: 6   NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFL 65
           +  QEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFL
Sbjct: 2   SANQEEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFL 61

Query: 66  FDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG 101
           FDGRRLRAEQTPDEL+MEDGDEIDAMLHQTGGS G
Sbjct: 62  FDGRRLRAEQTPDELDMEDGDEIDAMLHQTGGSGG 96

[Close]

BLAST of Csor.00g103900 vs. TAIR 10
Match: AT5G55160.1 (small ubiquitin-like modifier 2 )

HSP 1 Score: 169.1 bits (427), Expect = 1.8e-42
Identity = 85/90 (94.44%), Postives = 86/90 (95.56%), Query Frame = 0


Query: 10  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 69
           EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGR
Sbjct: 6   EEDKKP-DQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFDGR 65

Query: 70  RLRAEQTPDELEMEDGDEIDAMLHQTGGSS 100
           RLRAEQTPDELEMEDGDEIDAMLHQTGG +
Sbjct: 66  RLRAEQTPDELEMEDGDEIDAMLHQTGGGA 94

[Close]

BLAST of Csor.00g103900 vs. TAIR 10
Match: AT5G55160.2 (small ubiquitin-like modifier 2 )

HSP 1 Score: 159.8 bits (403), Expect = 1.1e-39
Identity = 85/103 (82.52%), Postives = 86/103 (83.50%), Query Frame = 0


Query: 10  EEDKKPNDQSAHINLKVKGQ-------------DGNEVFFRIKRSTQLKKLMNAYCDRQS 69
           EEDKKP DQ AHINLKVKGQ             DGNEVFFRIKRSTQLKKLMNAYCDRQS
Sbjct: 6   EEDKKP-DQGAHINLKVKGQAFFVVGTWLVIDTDGNEVFFRIKRSTQLKKLMNAYCDRQS 65

Query: 70  VDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 100
           VD NSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG +
Sbjct: 66  VDFNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGGA 107

[Close]

BLAST of Csor.00g103900 vs. TAIR 10
Match: AT5G55170.1 (small ubiquitin-like modifier 3 )

HSP 1 Score: 97.4 bits (241), Expect = 6.7e-21
Identity = 49/89 (55.06%), Postives = 64/89 (71.91%), Query Frame = 0


Query: 11 EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDG 70
          +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G
Sbjct: 5  QDDKPIDQEQEAHVILKVKSQDGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFIFNG 64

Query: 71 RRLRAEQTPDELEMEDGDEIDAMLHQTGG 98
           R+   +TPDEL+MEDGD IDA    +GG
Sbjct: 65 ARIGGLETPDELDMEDGDVIDACRAMSGG 93

[Close]

BLAST of Csor.00g103900 vs. TAIR 10
Match: AT5G55856.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 94.4 bits (233), Expect = 5.7e-20
Identity = 46/88 (52.27%), Postives = 64/88 (72.73%), Query Frame = 0


Query: 12  DKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRL 71
           DKKP   S+HI +KVK QD   V+FRIKR  +L+K+M+AY D+  V+++++ FLFDG R+
Sbjct: 5   DKKPLIPSSHITVKVKNQDDICVYFRIKRDVELRKMMHAYSDKVGVEMSTLRFLFDGNRI 64

Query: 72  RAEQTPDELEMEDGDEIDAMLHQTGGSS 100
           +  QTP+EL +ED DEI+A   Q GG S
Sbjct: 65  KLNQTPNELGLEDEDEIEAFGEQLGGFS 92

The following BLAST results are available for this feature:

BLAST of Csor.00g103900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P55852	4.7e-43	90.53	Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1...	[more]
Q9FLP6	2.6e-41	94.44	Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1...	[more]
P55857	1.2e-38	89.01	Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=S...	[more]
O13351	1.2e-22	55.91	Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]
Q9FLP5	9.5e-20	55.06	Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana OX=3702 GN=SUMO3 PE=1...	[more]

BLAST of Csor.00g103900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943304.1	1.68e-63	100.00	small ubiquitin-related modifier 1 [Cucurbita moschata] >XP_022944672.1 small ub...	[more]
XP_008456407.1	9.74e-63	100.00	PREDICTED: small ubiquitin-related modifier 1 [Cucumis melo] >KAA0054458.1 small...	[more]
XP_022986050.1	1.38e-62	99.00	small ubiquitin-related modifier 1-like [Cucurbita maxima]	[more]
XP_004150752.1	2.79e-62	98.99	small ubiquitin-related modifier 1 [Cucumis sativus] >XP_038902909.1 small ubiqu...	[more]
XP_022970791.1	2.09e-61	97.98	small ubiquitin-related modifier 1-like [Cucurbita maxima] >XP_023533825.1 small...	[more]

BLAST of Csor.00g103900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FTW7	8.14e-64	100.00	Small ubiquitin-related modifier OS=Cucurbita moschata OX=3662 GN=LOC111448116 P...	[more]
A0A6J1JFC9	8.14e-64	100.00	Small ubiquitin-related modifier OS=Cucurbita maxima OX=3661 GN=LOC111483904 PE=...	[more]
A0A5A7UHK7	4.72e-63	100.00	Small ubiquitin-related modifier OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3C3V0	4.72e-63	100.00	Small ubiquitin-related modifier OS=Cucumis melo OX=3656 GN=LOC103496358 PE=3 SV...	[more]
A0A6J1JCZ0	6.70e-63	99.00	Small ubiquitin-related modifier OS=Cucurbita maxima OX=3661 GN=LOC111483905 PE=...	[more]

BLAST of Csor.00g103900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26840.1	3.3e-44	90.53	small ubiquitin-like modifier 1	[more]
AT5G55160.1	1.8e-42	94.44	small ubiquitin-like modifier 2	[more]
AT5G55160.2	1.1e-39	82.52	small ubiquitin-like modifier 2	[more]
AT5G55170.1	6.7e-21	55.06	small ubiquitin-like modifier 3	[more]
AT5G55856.1	5.7e-20	52.27	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 22..93 e-value: 2.5E-14 score: 63.6
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 20..97 score: 15.906139
IPR022617	Rad60/SUMO-like domain	PFAM	PF11976	Rad60-SLD	coord: 22..92 e-value: 5.3E-25 score: 87.0
None	No IPR available	GENE3D	3.10.20.90		coord: 1..97 e-value: 4.7E-41 score: 141.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR10562:SF87	SMALL UBIQUITIN-RELATED MODIFIER	coord: 5..98
None	No IPR available	PANTHER	PTHR10562	SMALL UBIQUITIN-RELATED MODIFIER	coord: 5..98
None	No IPR available	CDD	cd16116	Ubl_Smt3_like	coord: 20..93 e-value: 3.94435E-48 score: 145.834
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 10..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g103900.m01	Csor.00g103900.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016925	protein sumoylation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0031386	protein tag
molecular_function	GO:0044389	ubiquitin-like protein ligase binding
molecular_function	GO:0005515	protein binding