Csor.00g103700 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTATTCTTGGAGCTATGGCTAAACATTTGTATACAATAATTGGGTACAAACTAATCTTTTGGGGGGAATGTCTCTCTTAACTTTCAAAACCCAAATATCTTGTTGTTTATGTCATTGTTTATCATTACCTTGCTTGACAAATTTAGCCTTCTCCTTGATCCAGGCCTGGCGTGATGCTTCTTTTTCCTTTGTAAGTGCACATAACCCATTTGCATTTAAAATCCTGTGTCCTTTTTCATGGCTGCAAGAGATGATTCATAACAGGTTAATGCATATGAATGAACAGATATGCATCAATTAGAGCAATTGAGAGTCCTTCAAGTCTTGATGACCGGCAATGGTTGAGTTATTGGGTTATATACTCCCTCATAACCCTCTTCGAACTAACATTTTGGAGAATCCTGGTTTGGTATAATTCTAGTACTTAATACACAAAACTATTCTTTGAGGCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAGTCTACATTTTAAAGGCTGTGGGATGGCATGCAGGATTCCACTTTGGGGATACATTAAGCTCGTGGCTTGTGTATGGTTGGTTCTACCAATTTTCAATGGGGCAGCCTATATCTACGAGAATATAGTGAGGAAATATGTTAAGATTGGGGGATATGTGAACCCGAACTATCCAGAGAATCAAAAGAAGGTTCTCCAGATGATGACTCTGGATTCTAGGAAATCTGCGGAGCGTTATATCGATAGATATGGACCCGATGCATTTGAACGAGTTGTCAAAGCTGTAAGCTGCCTCTATTTATATTCAAATTTTGTTGCTATAATACTTAAAGATATCTATGATGTTAATCCTGTTATACTTGATTTTGTAGGCTGAAAAAGAAGCAAAGAAACACTGA ATGGGTATTCTTGGAGCTATGGCTAAACATTTGTATACAATAATTGGGCCTGGCGTGATGCTTCTTTTTCCTTTATATGCATCAATTAGAGCAATTGAGAGTCCTTCAAGTCTTGATGACCGGCAATGGTTGAGTTATTGGGTTATATACTCCCTCATAACCCTCTTCGAACTAACATTTTGGAGAATCCTGGTTTGGATTCCACTTTGGGGATACATTAAGCTCGTGGCTTGTGTATGGTTGGTTCTACCAATTTTCAATGGGGCAGCCTATATCTACGAGAATATAGTGAGGAAATATGTTAAGATTGGGGGATATGTGAACCCGAACTATCCAGAGAATCAAAAGAAGGTTCTCCAGATGATGACTCTGGATTCTAGGAAATCTGCGGAGCGTTATATCGATAGATATGGACCCGATGCATTTGAACGAGTTGTCAAAGCTGCTGAAAAAGAAGCAAAGAAACACTGA ATGGGTATTCTTGGAGCTATGGCTAAACATTTGTATACAATAATTGGGCCTGGCGTGATGCTTCTTTTTCCTTTATATGCATCAATTAGAGCAATTGAGAGTCCTTCAAGTCTTGATGACCGGCAATGGTTGAGTTATTGGGTTATATACTCCCTCATAACCCTCTTCGAACTAACATTTTGGAGAATCCTGGTTTGGATTCCACTTTGGGGATACATTAAGCTCGTGGCTTGTGTATGGTTGGTTCTACCAATTTTCAATGGGGCAGCCTATATCTACGAGAATATAGTGAGGAAATATGTTAAGATTGGGGGATATGTGAACCCGAACTATCCAGAGAATCAAAAGAAGGTTCTCCAGATGATGACTCTGGATTCTAGGAAATCTGCGGAGCGTTATATCGATAGATATGGACCCGATGCATTTGAACGAGTTGTCAAAGCTGCTGAAAAAGAAGCAAAGAAACACTGA MGILGAMAKHLYTIIGPGVMLLFPLYASIRAIESPSSLDDRQWLSYWVIYSLITLFELTFWRILVWIPLWGYIKLVACVWLVLPIFNGAAYIYENIVRKYVKIGGYVNPNYPENQKKVLQMMTLDSRKSAERYIDRYGPDAFERVVKAAEKEAKKH Homology
BLAST of Csor.00g103700 vs. ExPASy Swiss-Prot
Match: Q682H0 (HVA22-like protein f OS=Arabidopsis thaliana OX=3702 GN=HVA22F PE=2 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 2.7e-53 Identity = 98/158 (62.03%), Postives = 129/158 (81.65%), Query Frame = 0
BLAST of Csor.00g103700 vs. ExPASy Swiss-Prot
Match: Q9S7V4 (HVA22-like protein a OS=Arabidopsis thaliana OX=3702 GN=HVA22A PE=2 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 2.4e-30 Identity = 65/151 (43.05%), Postives = 100/151 (66.23%), Query Frame = 0
BLAST of Csor.00g103700 vs. ExPASy Swiss-Prot
Match: Q9SYX7 (HVA22-like protein b OS=Arabidopsis thaliana OX=3702 GN=HVA22B PE=2 SV=2) HSP 1 Score: 115.5 bits (288), Expect = 5.2e-25 Identity = 60/108 (55.56%), Postives = 76/108 (70.37%), Query Frame = 0
BLAST of Csor.00g103700 vs. ExPASy Swiss-Prot
Match: Q9S784 (HVA22-like protein c OS=Arabidopsis thaliana OX=3702 GN=HVA22C PE=2 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 1.2e-24 Identity = 61/158 (38.61%), Postives = 97/158 (61.39%), Query Frame = 0
BLAST of Csor.00g103700 vs. ExPASy Swiss-Prot
Match: Q9FED2 (HVA22-like protein e OS=Arabidopsis thaliana OX=3702 GN=HVA22E PE=2 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 2.0e-24 Identity = 55/99 (55.56%), Postives = 71/99 (71.72%), Query Frame = 0
BLAST of Csor.00g103700 vs. NCBI nr
Match: KAG6570567.1 (HVA22-like protein f, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 308 bits (790), Expect = 8.96e-106 Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0
BLAST of Csor.00g103700 vs. NCBI nr
Match: KAG7010421.1 (HVA22-like protein f [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 307 bits (786), Expect = 3.65e-105 Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 0
BLAST of Csor.00g103700 vs. NCBI nr
Match: XP_022944350.1 (HVA22-like protein f [Cucurbita moschata]) HSP 1 Score: 305 bits (781), Expect = 2.11e-104 Identity = 155/156 (99.36%), Postives = 155/156 (99.36%), Query Frame = 0
BLAST of Csor.00g103700 vs. NCBI nr
Match: XP_023511892.1 (HVA22-like protein f isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 305 bits (780), Expect = 3.00e-104 Identity = 153/156 (98.08%), Postives = 155/156 (99.36%), Query Frame = 0
BLAST of Csor.00g103700 vs. NCBI nr
Match: XP_022986043.1 (HVA22-like protein f [Cucurbita maxima]) HSP 1 Score: 298 bits (762), Expect = 1.67e-101 Identity = 151/156 (96.79%), Postives = 154/156 (98.72%), Query Frame = 0
BLAST of Csor.00g103700 vs. ExPASy TrEMBL
Match: A0A6J1FYL8 (HVA22-like protein OS=Cucurbita moschata OX=3662 GN=LOC111448816 PE=3 SV=1) HSP 1 Score: 305 bits (781), Expect = 1.02e-104 Identity = 155/156 (99.36%), Postives = 155/156 (99.36%), Query Frame = 0
BLAST of Csor.00g103700 vs. ExPASy TrEMBL
Match: A0A6J1JFC2 (HVA22-like protein OS=Cucurbita maxima OX=3661 GN=LOC111483897 PE=3 SV=1) HSP 1 Score: 298 bits (762), Expect = 8.08e-102 Identity = 151/156 (96.79%), Postives = 154/156 (98.72%), Query Frame = 0
BLAST of Csor.00g103700 vs. ExPASy TrEMBL
Match: A0A5D3DA55 (HVA22-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold519G00090 PE=3 SV=1) HSP 1 Score: 286 bits (733), Expect = 2.14e-97 Identity = 143/156 (91.67%), Postives = 152/156 (97.44%), Query Frame = 0
BLAST of Csor.00g103700 vs. ExPASy TrEMBL
Match: A0A1S3C319 (HVA22-like protein OS=Cucumis melo OX=3656 GN=LOC103496325 PE=3 SV=1) HSP 1 Score: 286 bits (733), Expect = 2.14e-97 Identity = 143/156 (91.67%), Postives = 152/156 (97.44%), Query Frame = 0
BLAST of Csor.00g103700 vs. ExPASy TrEMBL
Match: A0A0A0KF72 (HVA22-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G176940 PE=3 SV=1) HSP 1 Score: 284 bits (727), Expect = 1.76e-96 Identity = 142/156 (91.03%), Postives = 152/156 (97.44%), Query Frame = 0
BLAST of Csor.00g103700 vs. TAIR 10
Match: AT2G42820.1 (HVA22-like protein F ) HSP 1 Score: 209.5 bits (532), Expect = 1.9e-54 Identity = 98/158 (62.03%), Postives = 129/158 (81.65%), Query Frame = 0
BLAST of Csor.00g103700 vs. TAIR 10
Match: AT1G74520.1 (HVA22 homologue A ) HSP 1 Score: 133.3 bits (334), Expect = 1.7e-31 Identity = 65/151 (43.05%), Postives = 100/151 (66.23%), Query Frame = 0
BLAST of Csor.00g103700 vs. TAIR 10
Match: AT5G62490.1 (HVA22 homologue B ) HSP 1 Score: 115.5 bits (288), Expect = 3.7e-26 Identity = 60/108 (55.56%), Postives = 76/108 (70.37%), Query Frame = 0
BLAST of Csor.00g103700 vs. TAIR 10
Match: AT1G69700.1 (HVA22 homologue C ) HSP 1 Score: 114.4 bits (285), Expect = 8.3e-26 Identity = 61/158 (38.61%), Postives = 97/158 (61.39%), Query Frame = 0
BLAST of Csor.00g103700 vs. TAIR 10
Match: AT5G50720.1 (HVA22 homologue E ) HSP 1 Score: 113.6 bits (283), Expect = 1.4e-25 Identity = 55/99 (55.56%), Postives = 71/99 (71.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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