Csor.00g103460 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g103460
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	S-adenosylmethionine-dependent methyltransferase, putative
Location	Csor_Chr20: 1428270 .. 1431145 (-)
RNA-Seq Expression	Csor.00g103460
Synteny	Csor.00g103460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTATCTTTGAAATTTGGGTACAAATGGGTAGCGGTTGCTGCTGCCTCCGAACCAGTCGTAGGACGTCAAAGACATTTGAGAAATCTTTGCTGCTTATCTAATCGTATTTACTCAAATGGGATATCGTCCGAGTATCAGAGTGATTTCTCTTCACCGTCGTCGTCGTCGTCGTCGTCGTCGAAAGATTTTTCGTCTCTAGAAGGTTACATTTTCATTTTGTTGTGCTTAAATCTCCACATTTTCTTGTTAGATTATCATTTACCAACATAATATTCGTTTTAGGGGTTTTGATTTTGATTATTGTTAATGTTGTTGTTGTTTTTGTAATAATTTCTATTGAAATTTTATGTGCTGTTGTGAAATTGTGCATGATGCGATAATAGGATTGGAGGATGTCATGGTTGGCTACCTTTTTGGGAAGAAGAGAGCGACAGAAGTTGCTCACTCGTATGTATTTGCATCATCAGCTAACTTTTTTTTGTGCATTTTTACATGTGCTGGTATGGCTGTATGTTTTCTATTGTTTTCAGGCCTTTGTTCTTCACTGGCCTCTGTTTTTCAATGCAATGGTCTCTATTGAGCTGTATGATCATTAGGCTCAAACGTATGCCTTGAGACTTTCCAAACTTTGCTTGCTTTCTAGCTGTTGTTCTAGATATTAATTACCTTGTCTTTTATCAATCAGTGTATGGAAACGTGTCATCAGAACAGGGGATACAGTGGTAGATGCTACTTGTGGAAATGGGTATGATACTCTAGCTATGCTCAAAATGGTTGCTGACGAAGCTGGTTCTGCGCGTGTTTATGCAATGGACGTTCAGAAAGAGGCTTTAGAAAGCACTTCTGCGCTACTGGATGAGTCGCTTAGTGAAAAAGAGGTATCCTTTGGTTTATCTCATAACTTGCTCCAATCAGTGGCCTACAGCCTAAAATTGTAATTACGATAGTCTAAAGCTTCTTTTGCATAACAATATATGCTGATTGGATGTGATCCAATTATTTGCGAGTTTGAGGTTGTAGCAACCCAAGCCCACCACTAGTAGATATTGTTTGCTTTGGCCCGTTATGTATCGCCGTCAGCCTCACGGTTTTAAAGCGCATCAGCTAGGGATAGGTTTCCACACCCTTAAAAGAAATGTTTCGTTCTTCTTTCCAACCGATGTAGGATCTCACAATCCACCTCCCTTAGGGGCCTGGCTTCCTCGCTGGCACACCACTCAGTGTCTGGCTCTGATACCATTTGTAACAGTTGAAGCCTACCGCTAGTAGATATTGTCCGCTTTGGCCTGTTACGTATCGTCGTGAGCCTCACGGTTTTAAAACGCGTCAGCTGGAGAGATGTTTCCACACCCTTTTAAGGAATGTTTCATTCCCCTCTCCAACGTATGGGGATCTCACAATCCACCCCCTTGGAGGCCCAACGTCCTTGCTAGCACACCGTCTGGTGTCTGGTTTTGTAACACCGGGTGGTGTGGAAAGCTTTTAACGTTTATTTTTGTCAGTTCACTTTCAAAAAATGGGGATCAATCGATGACTTTACCTTCTGATTTGTGTAGTTAATCTTTGAACAATTGTTCAATTGCTTATATTTTCCAGTTTTATGTAGAGAAAACTTGTTAAACTCTCCTCCATTTGCCACAGCAGAATGGAAGATGTCATTCCAGAGGGTTCTCCCGTTAGGTAATGATTCCACATTTTGTGCTTAGTAATGACACATTTGTCATTTTAATTGATACCTATCCTTTTTTGCATTTTTTCGCTACCATATAAGAAAGTTGAAGAACAAGAAAGAATTCAAATAAATTAATTATCTGTGATTAGATATACCAGTTAATGCTGCTCTATTTCTTAGGCTTGTTGCATTTAACCTTGGCTACCTACCTGGTGGTAACAAAGCAATCACTACAAAGTCAGAAACTACATTACAAGCACTTGAAGCTGCCTATAGAATTCTGAAACCTGGAGGGCTCATCAGCCTTGTGGTTTATGTGGGGCATCCTGGTGGACTGTAATACTTCTGCTCCTCTTCTTTTTCTTCCCACTGCAATCCATGCTTATTTCTCTTCCTTAAAGCTACTAATTATCATCGTTGTGGACAAACCTTGAATGCATCATTTCAAGTGCTTATTTCATCTTTTTCTTTCATCAGTAAAAATTAATTCACAAGCTAAATACCTGCTTTGTGGGATGACATTGGTAGTAATTCAATCTCTGAACCAGTCATATCTCTGTTTTCTTTGAAAATAAATTGTGGGGTTAGGGTTATATATGGGAATATACAAATTAAATAACGCTTGTCAGTGAGATCCCACGTCGGTTGAAAAGGGGAACAAAACATTTCTTATAAGGGTGTGGAATCTTCTCCCTAGTAGATGCATTTTAAAACCGTGAGACTGATGGTGATACGTAACGGGCCAAAACGAACAATATTTGCTTGTGGTGAGCTTGGGCTGTTACAAATGGTATCAGAACCAGACATCGGGCGGTGTGTTAGCGAGGACGCTGGCCCCCAGGGGGGTGGACTGTGAGATCCCATATTGGTTGGAGAGGGGAACAAAACATTCCTTATAAGGGTGTGGAAATCTCTCCTTGATAGACGCATTTTAAAATCGTAAGGCTGACGGTGATACGTAACGAACCAAAACGGACAACATCTGCTAGCATTGAGTTTAGACTGTTTCATTATTAGTTCGCGCAAATGTTTGTGAGTTTGGCAGACGTTCTAATGGGTTTGTTTTCTAATGTTTAGGGAAGAATTGGAGACTATCCAAAAATTTTCTGGCGAGCTGGGTGTTGAGAATTGGATTTGTTGTAAGCTTCAGATGTTGAACCGGCCACTAGCACCAGTGCCTGTGTTCTTATTCAAGAGATGA

mRNA sequence

ATGTTATCTTTGAAATTTGGGTACAAATGGGTAGCGGTTGCTGCTGCCTCCGAACCAGTCGTAGGACGTCAAAGACATTTGAGAAATCTTTGCTGCTTATCTAATCGTATTTACTCAAATGGGATATCGTCCGAGTATCAGAGTGATTTCTCTTCACCGTCGTCGTCGTCGTCGTCGTCGTCGAAAGATTTTTCGTCTCTAGAAGGATTGGAGGATGTCATGGTTGGCTACCTTTTTGGGAAGAAGAGAGCGACAGAAGTTGCTCACTCTGTATGGAAACGTGTCATCAGAACAGGGGATACAGTGGTAGATGCTACTTGTGGAAATGGGTATGATACTCTAGCTATGCTCAAAATGGTTGCTGACGAAGCTGGTTCTGCGCGTGTTTATGCAATGGACGTTCAGAAAGAGGCTTTAGAAAGCACTTCTGCGCTACTGGATGAGTCGCTTAGTGAAAAAGAGAGAAAACTTGTTAAACTCTCCTCCATTTGCCACAGCAGAATGGAAGATGTCATTCCAGAGGGTTCTCCCGTTAGGCTTGTTGCATTTAACCTTGGCTACCTACCTGGTGGTAACAAAGCAATCACTACAAAGTCAGAAACTACATTACAAGCACTTGAAGCTGCCTATAGAATTCTGAAACCTGGAGGGCTCATCAGCCTTGTGGTTTATGTGGGGCATCCTGGTGGACTGGAAGAATTGGAGACTATCCAAAAATTTTCTGGCGAGCTGGGTGTTGAGAATTGGATTTGTTGTAAGCTTCAGATGTTGAACCGGCCACTAGCACCAGTGCCTGTGTTCTTATTCAAGAGATGA

Coding sequence (CDS)

ATGTTATCTTTGAAATTTGGGTACAAATGGGTAGCGGTTGCTGCTGCCTCCGAACCAGTCGTAGGACGTCAAAGACATTTGAGAAATCTTTGCTGCTTATCTAATCGTATTTACTCAAATGGGATATCGTCCGAGTATCAGAGTGATTTCTCTTCACCGTCGTCGTCGTCGTCGTCGTCGTCGAAAGATTTTTCGTCTCTAGAAGGATTGGAGGATGTCATGGTTGGCTACCTTTTTGGGAAGAAGAGAGCGACAGAAGTTGCTCACTCTGTATGGAAACGTGTCATCAGAACAGGGGATACAGTGGTAGATGCTACTTGTGGAAATGGGTATGATACTCTAGCTATGCTCAAAATGGTTGCTGACGAAGCTGGTTCTGCGCGTGTTTATGCAATGGACGTTCAGAAAGAGGCTTTAGAAAGCACTTCTGCGCTACTGGATGAGTCGCTTAGTGAAAAAGAGAGAAAACTTGTTAAACTCTCCTCCATTTGCCACAGCAGAATGGAAGATGTCATTCCAGAGGGTTCTCCCGTTAGGCTTGTTGCATTTAACCTTGGCTACCTACCTGGTGGTAACAAAGCAATCACTACAAAGTCAGAAACTACATTACAAGCACTTGAAGCTGCCTATAGAATTCTGAAACCTGGAGGGCTCATCAGCCTTGTGGTTTATGTGGGGCATCCTGGTGGACTGGAAGAATTGGAGACTATCCAAAAATTTTCTGGCGAGCTGGGTGTTGAGAATTGGATTTGTTGTAAGCTTCAGATGTTGAACCGGCCACTAGCACCAGTGCCTGTGTTCTTATTCAAGAGATGA

Protein sequence

MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHSVWKRVIRTGDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGLEELETIQKFSGELGVENWICCKLQMLNRPLAPVPVFLFKR

Homology

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BLAST of Csor.00g103460 vs. ExPASy Swiss-Prot
Match: O34614 (Putative rRNA methylase YtqB OS=Bacillus subtilis (strain 168) OX=224308 GN=ytqB PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.8e-20
Identity = 60/165 (36.36%), Postives = 92/165 (55.76%), Query Frame = 0


Query: 82  KRATEVAHSVWKRVIRTGDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALES 141
           K+    +  + K     GD VVDAT GNG+DT  + ++V +   +  VYA D+Q+ A+ +
Sbjct: 4   KKILPYSKELLKMAAGEGDIVVDATMGNGHDTQFLAELVGE---NGHVYAFDIQESAVAN 63

Query: 142 TSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRLVA--FNLGYLPGGNKAITTKS 201
           T     E L +  +    L    H ++ + +P  +  ++ A  FNLGYLPGG+K+ITT  
Sbjct: 64  TK----ERLGDMYQARTTLFHKSHDKIAESLPPETHGKVAAAVFNLGYLPGGDKSITTNG 123

Query: 202 ETTLQALEAAYRILKPGGLISLVVYVGHPGGLEELETIQKFSGEL 245
            +T++A+E    I+K  GLI LVVY GHP G  E   + +F  +L
Sbjct: 124 SSTIKAIEQLLSIMKDEGLIVLVVYHGHPEGKAEKNDVLEFCRDL 161

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BLAST of Csor.00g103460 vs. NCBI nr
Match: KAG6570591.1 (hypothetical protein SDJN03_29506, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 529 bits (1363), Expect = 2.57e-189
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSS 60
           MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSS
Sbjct: 1   MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSS 60

Query: 61  SKDFSSLEGLEDVMVGYLFGKKRATEVAHSVWKRVIRTGDTVVDATCGNGYDTLAMLKMV 120
           SKDFSSLEGLEDVMVGYLFGKKRATEVAHSVWKRVIRTGDTVVDATCGNGYDTLAMLKMV
Sbjct: 61  SKDFSSLEGLEDVMVGYLFGKKRATEVAHSVWKRVIRTGDTVVDATCGNGYDTLAMLKMV 120

Query: 121 ADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRL 180
           ADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRL
Sbjct: 121 ADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRL 180

Query: 181 VAFNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGLEELETIQKF 240
           VAFNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGLEELETIQKF
Sbjct: 181 VAFNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGLEELETIQKF 240

Query: 241 SGELGVENWICCKLQMLNRPLAPVPVFLFKR 271
           SGELGVENWICCKLQMLNRPLAPVPVFLFKR
Sbjct: 241 SGELGVENWICCKLQMLNRPLAPVPVFLFKR 271

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BLAST of Csor.00g103460 vs. NCBI nr
Match: XP_022943494.1 (uncharacterized protein LOC111448248 [Cucurbita moschata])

HSP 1 Score: 514 bits (1325), Expect = 1.54e-183
Identity = 265/271 (97.79%), Postives = 266/271 (98.15%), Query Frame = 0


Query: 1   MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSS 60
           MLSLKFGYKWVAVAAASEPVVGRQRHLRN CC SNRI+SNGISSEYQSDFSSPSSSSSSS
Sbjct: 1   MLSLKFGYKWVAVAAASEPVVGRQRHLRNFCCFSNRIHSNGISSEYQSDFSSPSSSSSSS 60

Query: 61  SKDFSSLEGLEDVMVGYLFGKKRATEVAHSVWKRVIRTGDTVVDATCGNGYDTLAMLKMV 120
            KDFSSLEGLEDVMVGYLFGKKRATEVAHSVWKRVIRTGDTVVDATCGNGYDTLAMLKMV
Sbjct: 61  -KDFSSLEGLEDVMVGYLFGKKRATEVAHSVWKRVIRTGDTVVDATCGNGYDTLAMLKMV 120

Query: 121 ADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRL 180
           ADEAGSARVYAMDVQKEALES SALLDESL EKERKLVKLSSICHSRMEDVIPEGSPVRL
Sbjct: 121 ADEAGSARVYAMDVQKEALESASALLDESLCEKERKLVKLSSICHSRMEDVIPEGSPVRL 180

Query: 181 VAFNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGLEELETIQKF 240
           VAFNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGLEELETIQKF
Sbjct: 181 VAFNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGLEELETIQKF 240

Query: 241 SGELGVENWICCKLQMLNRPLAPVPVFLFKR 271
           SGELGVENWICCKLQMLNRPLAPVPVFLFKR
Sbjct: 241 SGELGVENWICCKLQMLNRPLAPVPVFLFKR 270

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BLAST of Csor.00g103460 vs. NCBI nr
Match: XP_022986072.1 (uncharacterized protein LOC111483929 [Cucurbita maxima])

HSP 1 Score: 509 bits (1312), Expect = 1.32e-181
Identity = 262/271 (96.68%), Postives = 265/271 (97.79%), Query Frame = 0


Query: 1   MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSS 60
           MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCC SNRI+SNGISSEYQ+ FSSPSSSS   
Sbjct: 1   MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCFSNRIHSNGISSEYQTYFSSPSSSS--- 60

Query: 61  SKDFSSLEGLEDVMVGYLFGKKRATEVAHSVWKRVIRTGDTVVDATCGNGYDTLAMLKMV 120
            KDFSSLEGLEDVMVGYLFGKKRATEVAHSVWKRVIRTGDTVVDATCGNGYDTLAMLKMV
Sbjct: 61  -KDFSSLEGLEDVMVGYLFGKKRATEVAHSVWKRVIRTGDTVVDATCGNGYDTLAMLKMV 120

Query: 121 ADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRL 180
           ADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRL
Sbjct: 121 ADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRL 180

Query: 181 VAFNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGLEELETIQKF 240
           VAFNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGLEEL+TIQKF
Sbjct: 181 VAFNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGLEELDTIQKF 240

Query: 241 SGELGVENWICCKLQMLNRPLAPVPVFLFKR 271
           SGELGVENWICCKLQMLNRPLAPVPVFLFKR
Sbjct: 241 SGELGVENWICCKLQMLNRPLAPVPVFLFKR 267

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BLAST of Csor.00g103460 vs. NCBI nr
Match: XP_023511899.1 (uncharacterized protein LOC111776775 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 509 bits (1311), Expect = 1.87e-181
Identity = 261/271 (96.31%), Postives = 264/271 (97.42%), Query Frame = 0


Query: 1   MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSS 60
           MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCC SNRI+SNGISSEYQSDFSSPSSSS   
Sbjct: 1   MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCFSNRIHSNGISSEYQSDFSSPSSSS--- 60

Query: 61  SKDFSSLEGLEDVMVGYLFGKKRATEVAHSVWKRVIRTGDTVVDATCGNGYDTLAMLKMV 120
            KDFSSLEGLEDVMVGYLFGKKRATEVAHSVWKRVIRTGDTVVDATCGNGYDTLAMLKMV
Sbjct: 61  -KDFSSLEGLEDVMVGYLFGKKRATEVAHSVWKRVIRTGDTVVDATCGNGYDTLAMLKMV 120

Query: 121 ADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRL 180
           ADEAGSARVYAMDVQKEALESTSALLDESL +KERKLVKLSSICHSRMEDVIPEGSPVRL
Sbjct: 121 ADEAGSARVYAMDVQKEALESTSALLDESLCKKERKLVKLSSICHSRMEDVIPEGSPVRL 180

Query: 181 VAFNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGLEELETIQKF 240
           VAFNLGYLPGGNKAITTKSETTLQALEAAYR+LKPGGLISLVVYVGHPGGLEELETIQKF
Sbjct: 181 VAFNLGYLPGGNKAITTKSETTLQALEAAYRLLKPGGLISLVVYVGHPGGLEELETIQKF 240

Query: 241 SGELGVENWICCKLQMLNRPLAPVPVFLFKR 271
            GELGVENWICCKLQMLNRPLAPVPVFLFKR
Sbjct: 241 CGELGVENWICCKLQMLNRPLAPVPVFLFKR 267

[Close]

BLAST of Csor.00g103460 vs. NCBI nr
Match: XP_038902806.1 (putative rRNA methylase YtqB isoform X1 [Benincasa hispida] >XP_038902807.1 putative rRNA methylase YtqB isoform X1 [Benincasa hispida] >XP_038902808.1 putative rRNA methylase YtqB isoform X1 [Benincasa hispida])

HSP 1 Score: 451 bits (1160), Expect = 1.79e-158
Identity = 233/271 (85.98%), Postives = 248/271 (91.51%), Query Frame = 0


Query: 1   MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSS 60
           MLSLKFG KWVAVAA  +PVVG QRH+RN+C  +NRI SNG+SSEYQ DF+SP S     
Sbjct: 1   MLSLKFGSKWVAVAAF-KPVVGCQRHVRNICYSANRIQSNGLSSEYQIDFNSPLSL---- 60

Query: 61  SKDFSSLEGLEDVMVGYLFGKKRATEVAHSVWKRVIRTGDTVVDATCGNGYDTLAMLKMV 120
            KDFSSLEGLEDVMVGY FGKKRATEVAHSVWK V+R GDTVVDATCGNGYDT AM+KMV
Sbjct: 61  -KDFSSLEGLEDVMVGYFFGKKRATEVAHSVWKHVVRKGDTVVDATCGNGYDTRAMVKMV 120

Query: 121 ADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRL 180
           ADE+GSARVYAMDVQKEALE+TSA LDESLSEKE+KLVKLSSICHSRMEDVIPE SPVRL
Sbjct: 121 ADESGSARVYAMDVQKEALENTSAFLDESLSEKEKKLVKLSSICHSRMEDVIPEDSPVRL 180

Query: 181 VAFNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGLEELETIQKF 240
           VAFNLGYLPGGNKAITTKSETTL+AL+AA+RILKPGGLISLVVYVGHPGGLEELETIQKF
Sbjct: 181 VAFNLGYLPGGNKAITTKSETTLRALKAAHRILKPGGLISLVVYVGHPGGLEELETIQKF 240

Query: 241 SGELGVENWICCKLQMLNRPLAPVPVFLFKR 271
           S +L VENWICCKLQMLNRPLAPVPVFLFKR
Sbjct: 241 SSDLAVENWICCKLQMLNRPLAPVPVFLFKR 265

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BLAST of Csor.00g103460 vs. ExPASy TrEMBL
Match: A0A6J1FUH7 (uncharacterized protein LOC111448248 OS=Cucurbita moschata OX=3662 GN=LOC111448248 PE=4 SV=1)

HSP 1 Score: 514 bits (1325), Expect = 7.44e-184
Identity = 265/271 (97.79%), Postives = 266/271 (98.15%), Query Frame = 0


Query: 1   MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSS 60
           MLSLKFGYKWVAVAAASEPVVGRQRHLRN CC SNRI+SNGISSEYQSDFSSPSSSSSSS
Sbjct: 1   MLSLKFGYKWVAVAAASEPVVGRQRHLRNFCCFSNRIHSNGISSEYQSDFSSPSSSSSSS 60

Query: 61  SKDFSSLEGLEDVMVGYLFGKKRATEVAHSVWKRVIRTGDTVVDATCGNGYDTLAMLKMV 120
            KDFSSLEGLEDVMVGYLFGKKRATEVAHSVWKRVIRTGDTVVDATCGNGYDTLAMLKMV
Sbjct: 61  -KDFSSLEGLEDVMVGYLFGKKRATEVAHSVWKRVIRTGDTVVDATCGNGYDTLAMLKMV 120

Query: 121 ADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRL 180
           ADEAGSARVYAMDVQKEALES SALLDESL EKERKLVKLSSICHSRMEDVIPEGSPVRL
Sbjct: 121 ADEAGSARVYAMDVQKEALESASALLDESLCEKERKLVKLSSICHSRMEDVIPEGSPVRL 180

Query: 181 VAFNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGLEELETIQKF 240
           VAFNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGLEELETIQKF
Sbjct: 181 VAFNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGLEELETIQKF 240

Query: 241 SGELGVENWICCKLQMLNRPLAPVPVFLFKR 271
           SGELGVENWICCKLQMLNRPLAPVPVFLFKR
Sbjct: 241 SGELGVENWICCKLQMLNRPLAPVPVFLFKR 270

[Close]

BLAST of Csor.00g103460 vs. ExPASy TrEMBL
Match: A0A6J1J6K5 (uncharacterized protein LOC111483929 OS=Cucurbita maxima OX=3661 GN=LOC111483929 PE=4 SV=1)

HSP 1 Score: 509 bits (1312), Expect = 6.39e-182
Identity = 262/271 (96.68%), Postives = 265/271 (97.79%), Query Frame = 0


Query: 1   MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSS 60
           MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCC SNRI+SNGISSEYQ+ FSSPSSSS   
Sbjct: 1   MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCFSNRIHSNGISSEYQTYFSSPSSSS--- 60

Query: 61  SKDFSSLEGLEDVMVGYLFGKKRATEVAHSVWKRVIRTGDTVVDATCGNGYDTLAMLKMV 120
            KDFSSLEGLEDVMVGYLFGKKRATEVAHSVWKRVIRTGDTVVDATCGNGYDTLAMLKMV
Sbjct: 61  -KDFSSLEGLEDVMVGYLFGKKRATEVAHSVWKRVIRTGDTVVDATCGNGYDTLAMLKMV 120

Query: 121 ADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRL 180
           ADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRL
Sbjct: 121 ADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRL 180

Query: 181 VAFNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGLEELETIQKF 240
           VAFNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGLEEL+TIQKF
Sbjct: 181 VAFNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGLEELDTIQKF 240

Query: 241 SGELGVENWICCKLQMLNRPLAPVPVFLFKR 271
           SGELGVENWICCKLQMLNRPLAPVPVFLFKR
Sbjct: 241 SGELGVENWICCKLQMLNRPLAPVPVFLFKR 267

[Close]

BLAST of Csor.00g103460 vs. ExPASy TrEMBL
Match: A0A0A0KEF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G136560 PE=4 SV=1)

HSP 1 Score: 445 bits (1144), Expect = 2.37e-156
Identity = 230/271 (84.87%), Postives = 245/271 (90.41%), Query Frame = 0


Query: 1   MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSS 60
           MLSLKFG KWVAVA  SE VVGRQRHLR+LCC SNRI SNG+SS+YQ DF+SP SS    
Sbjct: 1   MLSLKFGSKWVAVAT-SESVVGRQRHLRDLCCFSNRIQSNGLSSQYQIDFNSPLSS---- 60

Query: 61  SKDFSSLEGLEDVMVGYLFGKKRATEVAHSVWKRVIRTGDTVVDATCGNGYDTLAMLKMV 120
            K   SLEGLEDVMVGY FGKKRATEVAHSVWK +++ GDTVVDATCGNGYDTLAM+KMV
Sbjct: 61  -KHSLSLEGLEDVMVGYFFGKKRATEVAHSVWKCIVKKGDTVVDATCGNGYDTLAMVKMV 120

Query: 121 ADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRL 180
           ADE+GSARVYAMDVQ EALESTSALLDESLSEKE+KLVKLSSICHSRMEDVI E SPV L
Sbjct: 121 ADESGSARVYAMDVQNEALESTSALLDESLSEKEKKLVKLSSICHSRMEDVILEDSPVSL 180

Query: 181 VAFNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGLEELETIQKF 240
           VAFNLGYLPGGNKAITTKSETT QAL+AA+RILKPGGLISLVVYVGHPGG+EELETI+KF
Sbjct: 181 VAFNLGYLPGGNKAITTKSETTFQALKAAHRILKPGGLISLVVYVGHPGGMEELETIEKF 240

Query: 241 SGELGVENWICCKLQMLNRPLAPVPVFLFKR 271
           S +L VENWICCKLQMLNRPLAPVPVFLFKR
Sbjct: 241 SSDLAVENWICCKLQMLNRPLAPVPVFLFKR 265

[Close]

BLAST of Csor.00g103460 vs. ExPASy TrEMBL
Match: A0A6J1D7G1 (uncharacterized protein LOC111017978 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017978 PE=4 SV=1)

HSP 1 Score: 427 bits (1098), Expect = 2.40e-149
Identity = 225/271 (83.03%), Postives = 239/271 (88.19%), Query Frame = 0


Query: 1   MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSS 60
           MLSLKFG K VAV    +PVV RQRH RNL   SN I SNG+S EYQ++FSSPSSS    
Sbjct: 1   MLSLKFGLKGVAVTTP-KPVVRRQRHFRNLWFSSNCIQSNGLSFEYQTEFSSPSSS---- 60

Query: 61  SKDFSSLEGLEDVMVGYLFGKKRATEVAHSVWKRVIRTGDTVVDATCGNGYDTLAMLKMV 120
            K+FSSLEGLEDVMVGY+ GKKRATEVAHSVWK +IR GDTVVDAT GNGYDTLAM+KMV
Sbjct: 61  -KEFSSLEGLEDVMVGYMIGKKRATEVAHSVWKHIIRRGDTVVDATSGNGYDTLAMVKMV 120

Query: 121 ADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRL 180
           ADE+GS  VYAMDVQKEAL  TSALL+ESL E+E+KLVKLSSICHSRMEDVIPEGSPVRL
Sbjct: 121 ADESGSGCVYAMDVQKEALAKTSALLEESLDEQEKKLVKLSSICHSRMEDVIPEGSPVRL 180

Query: 181 VAFNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGLEELETIQKF 240
           VAFNLGYLPGGNKAITTKSETTLQALEAA RILKPGGLISLVVYVGHPGG+EELETIQKF
Sbjct: 181 VAFNLGYLPGGNKAITTKSETTLQALEAANRILKPGGLISLVVYVGHPGGVEELETIQKF 240

Query: 241 SGELGVENWICCKLQMLNRPLAPVPVFLFKR 271
           +  L VENWICCKLQMLNRPLAPVPVFLFKR
Sbjct: 241 ASNLAVENWICCKLQMLNRPLAPVPVFLFKR 265

[Close]

BLAST of Csor.00g103460 vs. ExPASy TrEMBL
Match: A0A6J1D648 (uncharacterized protein LOC111017978 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111017978 PE=4 SV=1)

HSP 1 Score: 422 bits (1084), Expect = 3.14e-147
Identity = 225/271 (83.03%), Postives = 238/271 (87.82%), Query Frame = 0


Query: 1   MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSS 60
           MLSLKFG K VAV    +PVV RQRH RNL   SN I SNG+S EYQ++FSSPSSS    
Sbjct: 1   MLSLKFGLKGVAVTTP-KPVVRRQRHFRNLWFSSNCIQSNGLSFEYQTEFSSPSSS---- 60

Query: 61  SKDFSSLEGLEDVMVGYLFGKKRATEVAHSVWKRVIRTGDTVVDATCGNGYDTLAMLKMV 120
            K+FSSLEGLEDVMVGY+ GKKRATEVAHSVWK +IR GDTVVDAT GNGYDTLAM+KMV
Sbjct: 61  -KEFSSLEGLEDVMVGYMIGKKRATEVAHSVWKHIIRRGDTVVDATSGNGYDTLAMVKMV 120

Query: 121 ADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRL 180
           ADE+GS  VYAMDVQKEAL  TSALL+ESL E+E KLVKLSSICHSRMEDVIPEGSPVRL
Sbjct: 121 ADESGSGCVYAMDVQKEALAKTSALLEESLDEQE-KLVKLSSICHSRMEDVIPEGSPVRL 180

Query: 181 VAFNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGLEELETIQKF 240
           VAFNLGYLPGGNKAITTKSETTLQALEAA RILKPGGLISLVVYVGHPGG+EELETIQKF
Sbjct: 181 VAFNLGYLPGGNKAITTKSETTLQALEAANRILKPGGLISLVVYVGHPGGVEELETIQKF 240

Query: 241 SGELGVENWICCKLQMLNRPLAPVPVFLFKR 271
           +  L VENWICCKLQMLNRPLAPVPVFLFKR
Sbjct: 241 ASNLAVENWICCKLQMLNRPLAPVPVFLFKR 264

[Close]

BLAST of Csor.00g103460 vs. TAIR 10
Match: AT1G16445.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 292.0 bits (746), Expect = 5.0e-79
Identity = 146/219 (66.67%), Postives = 181/219 (82.65%), Query Frame = 0


Query: 55  SSSSSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHSVWKRVIRTGDTVVDATCGNGYDTL 114
           SS+ S S++F  + GLEDV VGYLFG+K+ATEVAH VW++VI+ GDTV+DATCGNG DTL
Sbjct: 55  SSTPSHSRNF-PIRGLEDVFVGYLFGRKKATEVAHVVWEQVIQKGDTVIDATCGNGNDTL 114

Query: 115 AMLKMVA-DEAG-SARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVI 174
           AMLKMV  D  G    VYAMD+QK+A+ESTS+LLD+++  KE++ VKL ++CHS+M +++
Sbjct: 115 AMLKMVMHDSVGCGGYVYAMDIQKDAIESTSSLLDQAVGSKEKECVKLFNLCHSKMGEIV 174

Query: 175 PEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGLE 234
           PE + VR+VAFNLGYLPGGNK+I T S+TTL AL+AA RILKPGGLISLVVY+GHPGG E
Sbjct: 175 PENARVRMVAFNLGYLPGGNKSIITLSDTTLSALKAAERILKPGGLISLVVYIGHPGGRE 234

Query: 235 ELETIQKFSGELGVENWICCKLQMLNRPLAPVPVFLFKR 272
           ELE ++ F   L V +WICCK QMLNRPLAPV VF+FKR
Sbjct: 235 ELEVVEAFGSGLPVSDWICCKFQMLNRPLAPVLVFMFKR 272

The following BLAST results are available for this feature:

BLAST of Csor.00g103460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O34614	1.8e-20	36.36	Putative rRNA methylase YtqB OS=Bacillus subtilis (strain 168) OX=224308 GN=ytqB...	[more]

BLAST of Csor.00g103460 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6570591.1	2.57e-189	100.00	hypothetical protein SDJN03_29506, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022943494.1	1.54e-183	97.79	uncharacterized protein LOC111448248 [Cucurbita moschata]	[more]
XP_022986072.1	1.32e-181	96.68	uncharacterized protein LOC111483929 [Cucurbita maxima]	[more]
XP_023511899.1	1.87e-181	96.31	uncharacterized protein LOC111776775 [Cucurbita pepo subsp. pepo]	[more]
XP_038902806.1	1.79e-158	85.98	putative rRNA methylase YtqB isoform X1 [Benincasa hispida] >XP_038902807.1 puta...	[more]

BLAST of Csor.00g103460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FUH7	7.44e-184	97.79	uncharacterized protein LOC111448248 OS=Cucurbita moschata OX=3662 GN=LOC1114482...	[more]
A0A6J1J6K5	6.39e-182	96.68	uncharacterized protein LOC111483929 OS=Cucurbita maxima OX=3661 GN=LOC111483929...	[more]
A0A0A0KEF8	2.37e-156	84.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G136560 PE=4 SV=1	[more]
A0A6J1D7G1	2.40e-149	83.03	uncharacterized protein LOC111017978 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1D648	3.14e-147	83.03	uncharacterized protein LOC111017978 isoform X2 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Csor.00g103460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16445.1	5.0e-79	66.67	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 81..271 e-value: 3.4E-62 score: 211.2
None	No IPR available	CDD	cd02440	AdoMet_MTases	coord: 101..226 e-value: 2.26662E-5 score: 40.4911
IPR010719	Putative rRNA methylase	PFAM	PF06962	rRNA_methylase	coord: 129..267 e-value: 1.7E-41 score: 141.4
IPR010719	Putative rRNA methylase	PANTHER	PTHR35276	S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN	coord: 47..271
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 95..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g103460.m01	Csor.00g103460.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
molecular_function	GO:0008168	methyltransferase activity