Csor.00g103440 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g103440
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	DEAD-box ATP-dependent RNA helicase 36
Location	Csor_Chr20: 1441278 .. 1443856 (-)
RNA-Seq Expression	Csor.00g103440
Synteny	Csor.00g103440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGAAGAAATTGGAAGGCGATTATGATTTGTGGAGGGAGAAAGAGATTGGGACAGGAAGAACAGTGAGAACGAATGGGTATTAATCAATTTGTGGTTTTGATCACAGATTTCTCTTATCGCTGAGATAAGGTTGACGATCCATGATTTCTAGATTGTGTGATGCCTTCAAGTTTTTGTGTCCACTCCATTGGAAATAATAGTTTATAATCAATTAATACTCTTTCCATTGATATAAAGCGTATAAAGTCAGGAGAGTTTATGCTCGAAGTGAACAATATCACACAATTGTAGAAAATGGTGATTTTTAACATAATATCAGAGTCATGCCCTTGACTTAACCATATTACTAGAATCTTCAAATGTCGAACAAAATGGTTGTAAGCCTCAAAAGTGTAGTCAAAAGTGACTCGAGTATCGAACAAAGGGTGTACTTTGTTTGAGAACTCTAGAGAAGGAGTCGAGTCTCGATTAAGGGAAGGCTGTTCGAGGGCTTCATAGGCTTCAGGGGAGGCTCTATAGTGTACTTTGTTCGAGGGGAGGATTGTTGGGAGGATGTAAGTAATACATCTTGATTGGTATGAGACCTTTTGAGGAGTCTAAAGCAAAGCATAAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTAGAGAGTCGTCTATCAACGTGGGACTTTCATCCAATAATCATAAATTAATTCTATTGGAAGTAAGAATCCGACATGTGACAATTCATTCTTAAATTTATTATTACGTTCTTAAAATTTAATTTTGATTTTTAAAAGGTTACCAAATCAATTTTAGTTTTGAACTTTTTACATAAAAACAATAATATTCCATTACTTATTTATTAAACACACTCTTGGAAACAAACAAAATTTACCTTTAATTATAAAATTAAATGCATAATCTATAATTAATTTATTAAAATGATAGTTTTAAAATATTTATGTCAGTGGCAATATTGTAATTTCTTAAAAATTAGAGTTATTTTTTAAAAAAGGAAAAGTTGATTTTTTTTTACCGCAGCATATTCGAACCTAGCCGCTATCTACCACGTCTCTCGCCTCCGTCGCCTTGGCTCACTTTTCATCGACTGGCTTTCCCTGATGAACTGCTCAGAGTTTCATGGCGCCAAGCTTTGAACAGTGAGCATTACTTGGCGGTGAAGCAATCAAATTTCGGAGCAACTTTTCAAATTTGTTCGGTCATCTCTGATTTCATGAATCAAAGAAGTAATAATCGTCGACGAGAATTTCCCTCTTTTCTCAAAACCTCATCGAAAGAACCCTAAACCTTCCGAGAATCCTAGCGCCGCCCTTGTTTCTTCCGCCGTCGACAACGTTGCTCCGGAGAAGCCTCTTCCGGTTGAGAAATCCACAGAACTTGGCACTAAATTCGCCGACGATGTTGCATTTGCTAACCTCGGCTTGTCAGAAGCGATCGTACGGACTTGCGAAGAATTGGCTATGAAGAAGCCTACGGCGGTTCAAACCCACTGTATCCCGAAGATTCTTGCTGGCCTCGACGTGCTTGGTATTGCCCAAACTGGGAGTGGGAAGACTGCTGCCTTTGCGTTGCCGATTCTTCAACGCCTTTCCGAGACACATTTTGGTATCTTTGCGTTGGTGATCAATCCCACTAGGGAATTGGAGTATCAATTGGCTGAGCAGTTTAGGGCACTTGGTTCCGGCTTGAACTTGCGGTGCTCAGTGGTTGTTGGAGGAATGGATATGCTGAACCAGACGCAGAGTTTGCTGAAGAGGCCTCACATTGTAATTGCAACGCCGGGAAGGGTTAAGGTGTTGCTGGAGGAGAACCCTGATATCCATGTCGTCTTTTCCAAGACTAAGGTTCGTTGTATTCCAACCTTGTTCCTTTCTATTGTACAATTTGAATTTGATGAGCATTGAGGAGTTAGAGGAAAAAGTGGATTTGCTAGTATTTTTCTTGAGATGTATTTGTTTTTCTTACCTTTGATAAACTTCATATGGGCTGCCCGCATGATTTGAAGCTTATTGATGCAATAGAGGCCAATCTTGGAAAGCAATTGGAGATTTTTGAATTCAAGGAGACTGAAGAGATTGAGAATGATTCAAAGGTAAGATCCGATGCTTTGGCTTCTTGGAAAACAATCGGATACTGTTATGGGCAGAATCATGTCACCAATGGTTGTTTGAAACTAAGAAACTTGTTTCACTCTGAAGCTTATGAATTTTCTTAGCTCTATAGTTGCATCAGTCATTTTACAGCTCAAGTAGCTATAAGTTTGACGAAACAGTAGAGATATCGGCGTATCGATATGATGGGATGCTGCTTGAGCATCTCAGTCGTCCCACTTCATAACGATAGGCCGACGATCTCTGTATGTGAATTTGAGTTTAATGCAGCTTGCAACGTTTGTACGCAGGTTTACAAGGCTAGTTATGTGGCAAAAATGAAGATGGTGGATGATGGATTTGAGGAGAAAGCGAAAGAACGAAAGAAAACATTGGCAGAGAAGGGACTATTGAAGCAAAGGAGCAAAAGGAGAAGAAAAGAAAAAACTTCAAAGCAGTTGACAGTTGACAGTTGA

mRNA sequence

ATGTGGAAGAAATTGGAAGGCGATTATGATTTGTGGAGGGAGAAAGAGATTGGGACAGGAAGAACAGTGAGAACGAATGGCATATTCGAACCTAGCCGCTATCTACCACGTCTCTCGCCTCCGTCGCCTTGGCTCACTTTTCATCGACTGGCTTTCCCTGATGAACTGCTCAGAGTTTCATGGCGCCAAGCTTTGAACAAAGTAATAATCGTCGACGAGAATTTCCCTCTTTTCTCAAAACCTCATCGAAAGAACCCTAAACCTTCCGAGAATCCTAGCGCCGCCCTTGTTTCTTCCGCCGTCGACAACGTTGCTCCGGAGAAGCCTCTTCCGGTTGAGAAATCCACAGAACTTGGCACTAAATTCGCCGACGATGTTGCATTTGCTAACCTCGGCTTGTCAGAAGCGATCGTACGGACTTGCGAAGAATTGGCTATGAAGAAGCCTACGGCGGTTCAAACCCACTGTATCCCGAAGATTCTTGCTGGCCTCGACGTGCTTGGTATTGCCCAAACTGGGAGTGGGAAGACTGCTGCCTTTGCGTTGCCGATTCTTCAACGCCTTTCCGAGACACATTTTGGTATCTTTGCGTTGGTGATCAATCCCACTAGGGAATTGGAGTATCAATTGGCTGAGCAGTTTAGGGCACTTGGTTCCGGCTTGAACTTGCGGTGCTCAGTGGTTGTTGGAGGAATGGATATGCTGAACCAGACGCAGAGTTTGCTGAAGAGGCCTCACATTGTAATTGCAACGCCGGGAAGGGTTAAGGTGTTGCTGGAGGAGAACCCTGATATCCATGTCGTCTTTTCCAAGACTAAGCTTATTGATGCAATAGAGGCCAATCTTGGAAAGCAATTGGAGATTTTTGAATTCAAGGAGACTGAAGAGATTGAGAATGATTCAAAGGTAAGATCCGATGCTTTGGCTTCTTGGAAAACAATCGGATACTGTTATGGGCAGAATCATGTCACCAATGTCGTCCCACTTCATAACGATAGGCCGACGATCTCTGTATGTGAATTTGAGTTTAATGCAGCTTGCAACGTTTGTACGCAGGTTTACAAGGCTAGTTATGTGGCAAAAATGAAGATGGTGGATGATGGATTTGAGGAGAAAGCGAAAGAACGAAAGAAAACATTGGCAGAGAAGGGACTATTGAAGCAAAGGAGCAAAAGGAGAAGAAAAGAAAAAACTTCAAAGCAGTTGACAGTTGACAGTTGA

Coding sequence (CDS)

ATGTGGAAGAAATTGGAAGGCGATTATGATTTGTGGAGGGAGAAAGAGATTGGGACAGGAAGAACAGTGAGAACGAATGGCATATTCGAACCTAGCCGCTATCTACCACGTCTCTCGCCTCCGTCGCCTTGGCTCACTTTTCATCGACTGGCTTTCCCTGATGAACTGCTCAGAGTTTCATGGCGCCAAGCTTTGAACAAAGTAATAATCGTCGACGAGAATTTCCCTCTTTTCTCAAAACCTCATCGAAAGAACCCTAAACCTTCCGAGAATCCTAGCGCCGCCCTTGTTTCTTCCGCCGTCGACAACGTTGCTCCGGAGAAGCCTCTTCCGGTTGAGAAATCCACAGAACTTGGCACTAAATTCGCCGACGATGTTGCATTTGCTAACCTCGGCTTGTCAGAAGCGATCGTACGGACTTGCGAAGAATTGGCTATGAAGAAGCCTACGGCGGTTCAAACCCACTGTATCCCGAAGATTCTTGCTGGCCTCGACGTGCTTGGTATTGCCCAAACTGGGAGTGGGAAGACTGCTGCCTTTGCGTTGCCGATTCTTCAACGCCTTTCCGAGACACATTTTGGTATCTTTGCGTTGGTGATCAATCCCACTAGGGAATTGGAGTATCAATTGGCTGAGCAGTTTAGGGCACTTGGTTCCGGCTTGAACTTGCGGTGCTCAGTGGTTGTTGGAGGAATGGATATGCTGAACCAGACGCAGAGTTTGCTGAAGAGGCCTCACATTGTAATTGCAACGCCGGGAAGGGTTAAGGTGTTGCTGGAGGAGAACCCTGATATCCATGTCGTCTTTTCCAAGACTAAGCTTATTGATGCAATAGAGGCCAATCTTGGAAAGCAATTGGAGATTTTTGAATTCAAGGAGACTGAAGAGATTGAGAATGATTCAAAGGTAAGATCCGATGCTTTGGCTTCTTGGAAAACAATCGGATACTGTTATGGGCAGAATCATGTCACCAATGTCGTCCCACTTCATAACGATAGGCCGACGATCTCTGTATGTGAATTTGAGTTTAATGCAGCTTGCAACGTTTGTACGCAGGTTTACAAGGCTAGTTATGTGGCAAAAATGAAGATGGTGGATGATGGATTTGAGGAGAAAGCGAAAGAACGAAAGAAAACATTGGCAGAGAAGGGACTATTGAAGCAAAGGAGCAAAAGGAGAAGAAAAGAAAAAACTTCAAAGCAGTTGACAGTTGACAGTTGA

Protein sequence

MWKKLEGDYDLWREKEIGTGRTVRTNGIFEPSRYLPRLSPPSPWLTFHRLAFPDELLRVSWRQALNKVIIVDENFPLFSKPHRKNPKPSENPSAALVSSAVDNVAPEKPLPVEKSTELGTKFADDVAFANLGLSEAIVRTCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLSETHFGIFALVINPTRELEYQLAEQFRALGSGLNLRCSVVVGGMDMLNQTQSLLKRPHIVIATPGRVKVLLEENPDIHVVFSKTKLIDAIEANLGKQLEIFEFKETEEIENDSKVRSDALASWKTIGYCYGQNHVTNVVPLHNDRPTISVCEFEFNAACNVCTQVYKASYVAKMKMVDDGFEEKAKERKKTLAEKGLLKQRSKRRRKEKTSKQLTVDS

Homology

[Close]

BLAST of Csor.00g103440 vs. ExPASy Swiss-Prot
Match: Q9SA27 (DEAD-box ATP-dependent RNA helicase 36 OS=Arabidopsis thaliana OX=3702 GN=RH36 PE=2 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.9e-58
Identity = 123/202 (60.89%), Postives = 145/202 (71.78%), Query Frame = 0


Query: 83  RKNPKPSENPSAALVSSAVDNVAPEK---PLPVEKSTELGTKFADDVAFANLGLSEAIVR 142
           RKNPK   N  +  + S  +    EK   P P   +T           F  LGL+E  V 
Sbjct: 19  RKNPKTVVNIQSQKLDSDQNTPQFEKFTNPNPSSDTTSA-------TNFEGLGLAEWAVE 78

Query: 143 TCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLSETHFGIFALV 202
           TC+EL M+KPT VQTHC+PKILAG DVLG+AQTGSGKTAAFALPIL RL+E  +G+FALV
Sbjct: 79  TCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHRLAEDPYGVFALV 138

Query: 203 INPTRELEYQLAEQFRALGSGLNLRCSVVVGGMDMLNQTQSLLKRPHIVIATPGRVKVLL 262
           + PTREL +QLAEQF+ALGS LNLRCSV+VGGMDML QT SL+ RPHIVI TPGR+KVLL
Sbjct: 139 VTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRPHIVITTPGRIKVLL 198

Query: 263 EENPDIHVVFSKTKLIDAIEAN 282
           E NPD+  VFS+TK +   EA+
Sbjct: 199 ENNPDVPPVFSRTKFLVLDEAD 213

[Close]

BLAST of Csor.00g103440 vs. ExPASy Swiss-Prot
Match: Q8L4E9 (DEAD-box ATP-dependent RNA helicase 36 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0633500 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.7e-46
Identity = 105/223 (47.09%), Postives = 136/223 (60.99%), Query Frame = 0


Query: 75  FPLFSKP--HRKNPK--------------PSENPSAALVSSAVDNVAPEKPLPVEKSTEL 134
           F LFSKP   +K PK              P+ +PS A+     D+         E + + 
Sbjct: 10  FLLFSKPKSSKKKPKQEAEPQVHTQPEEPPNPSPSPAIEPDLRDSDEAPAAAVTEHAGDD 69

Query: 135 GTKFADDVAFANLGLSEAIVRTCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTA 194
               A    FA LGLS+ +V  C+ L M+ PTAVQ  CIP+ L G DVLGIA+TGSGKTA
Sbjct: 70  AAAAAVPSTFAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTA 129

Query: 195 AFALPILQRLSETHFGIFALVINPTRELEYQLAEQFRALGSGLNLRCSVVVGGMDMLNQT 254
           AFALPIL RL E  +G+ AL + PTREL  QLAEQFRALG+ L LRC   +GG D L Q 
Sbjct: 130 AFALPILHRLGEDPYGVAALALAPTRELAAQLAEQFRALGAPLGLRCLAAIGGFDSLGQA 189

Query: 255 QSLLKRPHIVIATPGRVKVLLEENPDIHVVFSKTKLIDAIEAN 282
           + L +RPH+V+ATPGR+  L+ ++PD+  VF++TK +   EA+
Sbjct: 190 KGLARRPHVVVATPGRIATLINDDPDLAKVFARTKFLVLDEAD 232

[Close]

BLAST of Csor.00g103440 vs. ExPASy Swiss-Prot
Match: Q9Y6V7 (Probable ATP-dependent RNA helicase DDX49 OS=Homo sapiens OX=9606 GN=DDX49 PE=1 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 9.7e-39
Identity = 79/128 (61.72%), Postives = 96/128 (75.00%), Query Frame = 0


Query: 128 FANLGLSEAIVRTCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQR 187
           FA LGLS  +V  C +L +K+PT VQ  CIP IL G D LG A+TGSGKTAAF LPILQ+
Sbjct: 4   FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63

Query: 188 LSETHFGIFALVINPTRELEYQLAEQFRALGSGLNLRCSVVVGGMDMLNQTQSLLKRPHI 247
           LSE  +GIF LV+ PTREL YQ+AEQFR LG  L L+  ++VGGMDM+ Q   L ++PH+
Sbjct: 64  LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHV 123

Query: 248 VIATPGRV 256
           VIATPGR+
Sbjct: 124 VIATPGRL 131

[Close]

BLAST of Csor.00g103440 vs. ExPASy Swiss-Prot
Match: Q4FZF3 (Probable ATP-dependent RNA helicase DDX49 OS=Mus musculus OX=10090 GN=Ddx49 PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.7e-38
Identity = 78/128 (60.94%), Postives = 96/128 (75.00%), Query Frame = 0


Query: 128 FANLGLSEAIVRTCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQR 187
           FA +GLS  +V  C +L +K+PT VQ  CIP IL G D LG A+TGSGKTAAF LPILQ+
Sbjct: 4   FAEIGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63

Query: 188 LSETHFGIFALVINPTRELEYQLAEQFRALGSGLNLRCSVVVGGMDMLNQTQSLLKRPHI 247
           LSE  +GIF LV+ PTREL YQ+AEQFR LG  L L+  ++VGGMDM+ Q   L ++PH+
Sbjct: 64  LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHV 123

Query: 248 VIATPGRV 256
           VIATPGR+
Sbjct: 124 VIATPGRL 131

[Close]

BLAST of Csor.00g103440 vs. ExPASy Swiss-Prot
Match: Q55BR9 (Probable ATP-dependent RNA helicase ddx49 OS=Dictyostelium discoideum OX=44689 GN=ddx49 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 3.1e-37
Identity = 75/164 (45.73%), Postives = 111/164 (67.68%), Query Frame = 0


Query: 125 DVAFANLGLSEAIVRTCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI 184
           D  F  LGL+  +V  C++L  K P+ +Q + IP+IL G D++  A+TGSGKTA+FA+PI
Sbjct: 3   DKTFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPI 62

Query: 185 LQRLSETHFGIFALVINPTRELEYQLAEQFRALGSGLNLRCSVVVGGMDMLNQTQSLLKR 244
           L +LSE  +G+FA+++ PTREL  Q+ EQF A+G+ +N+ CSVV+GG+D + Q   L KR
Sbjct: 63  LNQLSEDPYGVFAVILTPTRELAVQIGEQFNAIGAPMNVNCSVVIGGIDNVTQALILDKR 122

Query: 245 PHIVIATPGRVKVLLEENPDIHVVFSKTKLIDAIEANLGKQLEI 289
           PHI++ATPGR+   L     I + F K  ++D  +  LG+  E+
Sbjct: 123 PHIIVATPGRLASHLNNGLKIALKFCKFLVLDEADRLLGEDFEL 166

[Close]

BLAST of Csor.00g103440 vs. NCBI nr
Match: KAG6570593.1 (DEAD-box ATP-dependent RNA helicase 36, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 803 bits (2073), Expect = 5.57e-293
Identity = 406/406 (100.00%), Postives = 406/406 (100.00%), Query Frame = 0


Query: 1   MWKKLEGDYDLWREKEIGTGRTVRTNGIFEPSRYLPRLSPPSPWLTFHRLAFPDELLRVS 60
           MWKKLEGDYDLWREKEIGTGRTVRTNGIFEPSRYLPRLSPPSPWLTFHRLAFPDELLRVS
Sbjct: 1   MWKKLEGDYDLWREKEIGTGRTVRTNGIFEPSRYLPRLSPPSPWLTFHRLAFPDELLRVS 60

Query: 61  WRQALNKVIIVDENFPLFSKPHRKNPKPSENPSAALVSSAVDNVAPEKPLPVEKSTELGT 120
           WRQALNKVIIVDENFPLFSKPHRKNPKPSENPSAALVSSAVDNVAPEKPLPVEKSTELGT
Sbjct: 61  WRQALNKVIIVDENFPLFSKPHRKNPKPSENPSAALVSSAVDNVAPEKPLPVEKSTELGT 120

Query: 121 KFADDVAFANLGLSEAIVRTCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAF 180
           KFADDVAFANLGLSEAIVRTCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAF
Sbjct: 121 KFADDVAFANLGLSEAIVRTCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAF 180

Query: 181 ALPILQRLSETHFGIFALVINPTRELEYQLAEQFRALGSGLNLRCSVVVGGMDMLNQTQS 240
           ALPILQRLSETHFGIFALVINPTRELEYQLAEQFRALGSGLNLRCSVVVGGMDMLNQTQS
Sbjct: 181 ALPILQRLSETHFGIFALVINPTRELEYQLAEQFRALGSGLNLRCSVVVGGMDMLNQTQS 240

Query: 241 LLKRPHIVIATPGRVKVLLEENPDIHVVFSKTKLIDAIEANLGKQLEIFEFKETEEIEND 300
           LLKRPHIVIATPGRVKVLLEENPDIHVVFSKTKLIDAIEANLGKQLEIFEFKETEEIEND
Sbjct: 241 LLKRPHIVIATPGRVKVLLEENPDIHVVFSKTKLIDAIEANLGKQLEIFEFKETEEIEND 300

Query: 301 SKVRSDALASWKTIGYCYGQNHVTNVVPLHNDRPTISVCEFEFNAACNVCTQVYKASYVA 360
           SKVRSDALASWKTIGYCYGQNHVTNVVPLHNDRPTISVCEFEFNAACNVCTQVYKASYVA
Sbjct: 301 SKVRSDALASWKTIGYCYGQNHVTNVVPLHNDRPTISVCEFEFNAACNVCTQVYKASYVA 360

Query: 361 KMKMVDDGFEEKAKERKKTLAEKGLLKQRSKRRRKEKTSKQLTVDS 406
           KMKMVDDGFEEKAKERKKTLAEKGLLKQRSKRRRKEKTSKQLTVDS
Sbjct: 361 KMKMVDDGFEEKAKERKKTLAEKGLLKQRSKRRRKEKTSKQLTVDS 406

[Close]

BLAST of Csor.00g103440 vs. NCBI nr
Match: KAG7010444.1 (DEAD-box ATP-dependent RNA helicase 36, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 512 bits (1318), Expect = 8.56e-180
Identity = 294/406 (72.41%), Postives = 294/406 (72.41%), Query Frame = 0


Query: 1   MWKKLEGDYDLWREKEIGTGRTVRTNGIFEPSRYLPRLSPPSPWLTFHRLAFPDELLRVS 60
           MWKKLEGDYDLWREKEIGTGRT                                      
Sbjct: 1   MWKKLEGDYDLWREKEIGTGRT-------------------------------------- 60

Query: 61  WRQALNKVIIVDENFPLFSKPHRKNPKPSENPSAALVSSAVDNVAPEKPLPVEKSTELGT 120
                                   NPKPSENPSAALVSSAVDNVAPEKPLPVEKSTELGT
Sbjct: 61  ------------------------NPKPSENPSAALVSSAVDNVAPEKPLPVEKSTELGT 120

Query: 121 KFADDVAFANLGLSEAIVRTCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAF 180
           KFADDVAFANLGLSEAIVRTCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAF
Sbjct: 121 KFADDVAFANLGLSEAIVRTCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAF 180

Query: 181 ALPILQRLSETHFGIFALVINPTRELEYQLAEQFRALGSGLNLRCSVVVGGMDMLNQTQS 240
           ALPILQRLSETHFGIFALVINPTRELEYQLAEQFRALGSGLNLRCSVVVGGMDMLNQTQS
Sbjct: 181 ALPILQRLSETHFGIFALVINPTRELEYQLAEQFRALGSGLNLRCSVVVGGMDMLNQTQS 240

Query: 241 LLKRPHIVIATPGRVKVLLEENPDIHVVFSKTKLIDAIEANLGKQLEIFEFKETEEIEND 300
           LLKRPHIVIATPGRVKVLLEENPDIHVVFSKTKLIDAIEANLGKQLEIFEFKETEEIEND
Sbjct: 241 LLKRPHIVIATPGRVKVLLEENPDIHVVFSKTKLIDAIEANLGKQLEIFEFKETEEIEND 294

Query: 301 SKVRSDALASWKTIGYCYGQNHVTNVVPLHNDRPTISVCEFEFNAACNVCTQVYKASYVA 360
           SKV                                                  YKASYVA
Sbjct: 301 SKV--------------------------------------------------YKASYVA 294

Query: 361 KMKMVDDGFEEKAKERKKTLAEKGLLKQRSKRRRKEKTSKQLTVDS 406
           KMKMVDDGFEEKAKERKKTLAEKGLLKQRSKRRRKEKTSKQLTVDS
Sbjct: 361 KMKMVDDGFEEKAKERKKTLAEKGLLKQRSKRRRKEKTSKQLTVDS 294

[Close]

BLAST of Csor.00g103440 vs. NCBI nr
Match: XP_022986070.1 (DEAD-box ATP-dependent RNA helicase 36-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 384 bits (986), Expect = 8.17e-128
Identity = 196/215 (91.16%), Postives = 204/215 (94.88%), Query Frame = 0


Query: 67  KVIIVDENFPLFSKPHRKNPKPSENPSAALVSSAVDNVAPEKPLPVEKSTELGTKFADDV 126
           +VIIVDENFPLFSKPHRKN KPSENPS A VSSAVDNVAP+KPLP+EKSTELGTKFADDV
Sbjct: 4   EVIIVDENFPLFSKPHRKNHKPSENPSTAPVSSAVDNVAPKKPLPIEKSTELGTKFADDV 63

Query: 127 AFANLGLSEAIVRTCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQ 186
           AFA+LGLSEAI RTCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQ
Sbjct: 64  AFADLGLSEAIARTCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQ 123

Query: 187 RLSETHFGIFALVINPTRELEYQLAEQFRALGSGLNLRCSVVVGGMDMLNQTQSLLKRPH 246
           RLSET FG+FALVI PTREL YQLAEQFRALGSGLNLRCSVVVGGMDMLNQTQSLLKRPH
Sbjct: 124 RLSETPFGVFALVITPTRELGYQLAEQFRALGSGLNLRCSVVVGGMDMLNQTQSLLKRPH 183

Query: 247 IVIATPGRVKVLLEENPDIHVVFSKTKLIDAIEAN 281
           +VIATPGRVKVLLEENPDIHVVFSKTK +   EA+
Sbjct: 184 LVIATPGRVKVLLEENPDIHVVFSKTKFLVLDEAD 218

[Close]

BLAST of Csor.00g103440 vs. NCBI nr
Match: XP_022986069.1 (DEAD-box ATP-dependent RNA helicase 36-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 384 bits (986), Expect = 9.04e-128
Identity = 196/215 (91.16%), Postives = 204/215 (94.88%), Query Frame = 0


Query: 67  KVIIVDENFPLFSKPHRKNPKPSENPSAALVSSAVDNVAPEKPLPVEKSTELGTKFADDV 126
           +VIIVDENFPLFSKPHRKN KPSENPS A VSSAVDNVAP+KPLP+EKSTELGTKFADDV
Sbjct: 4   EVIIVDENFPLFSKPHRKNHKPSENPSTAPVSSAVDNVAPKKPLPIEKSTELGTKFADDV 63

Query: 127 AFANLGLSEAIVRTCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQ 186
           AFA+LGLSEAI RTCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQ
Sbjct: 64  AFADLGLSEAIARTCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQ 123

Query: 187 RLSETHFGIFALVINPTRELEYQLAEQFRALGSGLNLRCSVVVGGMDMLNQTQSLLKRPH 246
           RLSET FG+FALVI PTREL YQLAEQFRALGSGLNLRCSVVVGGMDMLNQTQSLLKRPH
Sbjct: 124 RLSETPFGVFALVITPTRELGYQLAEQFRALGSGLNLRCSVVVGGMDMLNQTQSLLKRPH 183

Query: 247 IVIATPGRVKVLLEENPDIHVVFSKTKLIDAIEAN 281
           +VIATPGRVKVLLEENPDIHVVFSKTK +   EA+
Sbjct: 184 LVIATPGRVKVLLEENPDIHVVFSKTKFLVLDEAD 218

[Close]

BLAST of Csor.00g103440 vs. NCBI nr
Match: XP_038900331.1 (DEAD-box ATP-dependent RNA helicase 36 [Benincasa hispida])

HSP 1 Score: 346 bits (887), Expect = 1.75e-111
Identity = 235/497 (47.28%), Postives = 273/497 (54.93%), Query Frame = 0


Query: 65  LNKVIIVDENFPLFSKPHRKNPKPSENPSAALVSSAVDNVAPEKPLPVEKSTELGTKFAD 124
           +++ +I+DENFPLFSK HRK  KPSENP+ A +S AV+N AP+K L +EKSTEL TK  +
Sbjct: 1   MDREVIIDENFPLFSKSHRKKHKPSENPTGAPISPAVENNAPKKSLQIEKSTELSTKSTN 60

Query: 125 DVAFANLGLSEAIVRTCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI 184
           +V FA+LGLSE IV+TC+EL MKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI
Sbjct: 61  NVTFADLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI 120

Query: 185 LQRLSETHFGIFALVINPTRELEYQLAEQFRALGSGLNLRCSVVVGGMDMLNQTQSLLKR 244
           LQRLSET FG+FALV+ PTREL YQLAEQFRALGS LNLRCSVVVGGMDML+QTQSLLKR
Sbjct: 121 LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLSQTQSLLKR 180

Query: 245 PHIVIATPGRVKVLLEENPDIHVVFSKTKLIDAIEANL-------------------GKQ 304
           PHIVIATPGRVKVLLEENPDI VVFSKTK +   EA+                     +Q
Sbjct: 181 PHIVIATPGRVKVLLEENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPHSRQ 240

Query: 305 LEIFEFKETEEIEN---------------------------------------------- 364
             +F    T+++E                                               
Sbjct: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSK 300

Query: 365 --DSKVRSD-------------------------ALASWKTIG------YCYGQNHV--- 400
             D  +RS                          AL S+K+        Y +    V   
Sbjct: 301 MEDMGIRSAIIFVQTCKSCHMLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPVL 360

[Close]

BLAST of Csor.00g103440 vs. ExPASy TrEMBL
Match: A0A6J1JD07 (DEAD-box ATP-dependent RNA helicase 36-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483927 PE=3 SV=1)

HSP 1 Score: 384 bits (986), Expect = 3.96e-128
Identity = 196/215 (91.16%), Postives = 204/215 (94.88%), Query Frame = 0


Query: 67  KVIIVDENFPLFSKPHRKNPKPSENPSAALVSSAVDNVAPEKPLPVEKSTELGTKFADDV 126
           +VIIVDENFPLFSKPHRKN KPSENPS A VSSAVDNVAP+KPLP+EKSTELGTKFADDV
Sbjct: 4   EVIIVDENFPLFSKPHRKNHKPSENPSTAPVSSAVDNVAPKKPLPIEKSTELGTKFADDV 63

Query: 127 AFANLGLSEAIVRTCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQ 186
           AFA+LGLSEAI RTCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQ
Sbjct: 64  AFADLGLSEAIARTCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQ 123

Query: 187 RLSETHFGIFALVINPTRELEYQLAEQFRALGSGLNLRCSVVVGGMDMLNQTQSLLKRPH 246
           RLSET FG+FALVI PTREL YQLAEQFRALGSGLNLRCSVVVGGMDMLNQTQSLLKRPH
Sbjct: 124 RLSETPFGVFALVITPTRELGYQLAEQFRALGSGLNLRCSVVVGGMDMLNQTQSLLKRPH 183

Query: 247 IVIATPGRVKVLLEENPDIHVVFSKTKLIDAIEAN 281
           +VIATPGRVKVLLEENPDIHVVFSKTK +   EA+
Sbjct: 184 LVIATPGRVKVLLEENPDIHVVFSKTKFLVLDEAD 218

[Close]

BLAST of Csor.00g103440 vs. ExPASy TrEMBL
Match: A0A6J1JF19 (DEAD-box ATP-dependent RNA helicase 36-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483927 PE=3 SV=1)

HSP 1 Score: 384 bits (986), Expect = 4.37e-128
Identity = 196/215 (91.16%), Postives = 204/215 (94.88%), Query Frame = 0


Query: 67  KVIIVDENFPLFSKPHRKNPKPSENPSAALVSSAVDNVAPEKPLPVEKSTELGTKFADDV 126
           +VIIVDENFPLFSKPHRKN KPSENPS A VSSAVDNVAP+KPLP+EKSTELGTKFADDV
Sbjct: 4   EVIIVDENFPLFSKPHRKNHKPSENPSTAPVSSAVDNVAPKKPLPIEKSTELGTKFADDV 63

Query: 127 AFANLGLSEAIVRTCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQ 186
           AFA+LGLSEAI RTCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQ
Sbjct: 64  AFADLGLSEAIARTCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQ 123

Query: 187 RLSETHFGIFALVINPTRELEYQLAEQFRALGSGLNLRCSVVVGGMDMLNQTQSLLKRPH 246
           RLSET FG+FALVI PTREL YQLAEQFRALGSGLNLRCSVVVGGMDMLNQTQSLLKRPH
Sbjct: 124 RLSETPFGVFALVITPTRELGYQLAEQFRALGSGLNLRCSVVVGGMDMLNQTQSLLKRPH 183

Query: 247 IVIATPGRVKVLLEENPDIHVVFSKTKLIDAIEAN 281
           +VIATPGRVKVLLEENPDIHVVFSKTK +   EA+
Sbjct: 184 LVIATPGRVKVLLEENPDIHVVFSKTKFLVLDEAD 218

[Close]

BLAST of Csor.00g103440 vs. ExPASy TrEMBL
Match: A0A0A0KD72 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G136530 PE=3 SV=1)

HSP 1 Score: 337 bits (863), Expect = 2.88e-108
Identity = 228/496 (45.97%), Postives = 268/496 (54.03%), Query Frame = 0


Query: 65  LNKVIIVDENFPLFSKPHRKNPKPSENPSAALVSSAVDNVAPEKPLPVEKSTELGTKFAD 124
           +++ +IVD NFPLFSKPHRK  KPSENP+A      V NVAP+K L +EKSTEL TK  +
Sbjct: 1   MDQEVIVDRNFPLFSKPHRKKHKPSENPTA------VPNVAPKKSLQIEKSTELTTKSTN 60

Query: 125 DVAFANLGLSEAIVRTCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI 184
           ++ FA+LGLSE I++TC+EL MKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI
Sbjct: 61  NITFADLGLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI 120

Query: 185 LQRLSETHFGIFALVINPTRELEYQLAEQFRALGSGLNLRCSVVVGGMDMLNQTQSLLKR 244
           LQRLSET FG+FALV+ PTREL YQLAEQFRALGS LNLRCSVVVGGMDMLNQTQSLLKR
Sbjct: 121 LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKR 180

Query: 245 PHIVIATPGRVKVLLEENPDIHVVFSKTKLIDAIEANL-------------------GKQ 304
           PHIVIATPGR+KVLLE+NPDI VVFSKTK +   EA+                     +Q
Sbjct: 181 PHIVIATPGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ 240

Query: 305 LEIFEFKETEEIENDSKVRS------DALASWKTIG-----YCYGQNHVTNVVPLHN--- 364
             +F    T+++E   K+ +      +A   +KT+      Y +    V ++  LH    
Sbjct: 241 TLLFSATMTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLSK 300

Query: 365 ------------------------------------------------------------ 399
                                                                       
Sbjct: 301 MEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGRVPVL 360

[Close]

BLAST of Csor.00g103440 vs. ExPASy TrEMBL
Match: A0A5D3CBL8 (DEAD-box ATP-dependent RNA helicase 36 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3734G00060 PE=3 SV=1)

HSP 1 Score: 336 bits (861), Expect = 5.93e-108
Identity = 232/495 (46.87%), Postives = 269/495 (54.34%), Query Frame = 0


Query: 65  LNKVIIVDENFPLFSKPHRKNPKPSENPSAALVSSAVDNVAPEKPLPVEKSTELGTKFAD 124
           +++ +IVD NFPLFSKPHRK  KPSENP+AA     V+N+AP+  L +EKSTEL TK  +
Sbjct: 1   MDQEVIVDANFPLFSKPHRKKHKPSENPTAA-----VENIAPKSSLQIEKSTELTTKSTN 60

Query: 125 DVAFANLGLSEAIVRTCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI 184
           +V F++LGLSE IV+TC+EL MKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI
Sbjct: 61  NVTFSDLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI 120

Query: 185 LQRLSETHFGIFALVINPTRELEYQLAEQFRALGSGLNLRCSVVVGGMDMLNQTQSLLKR 244
           LQRLSET FG+FALV+ PTREL YQLAEQFRALGS LNLRCSVVVGGMDML+QTQSLLKR
Sbjct: 121 LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLSQTQSLLKR 180

Query: 245 PHIVIATPGRVKVLLEENPDIHVVFSKTKLIDAIEANL-------------------GKQ 304
           PHIVIATPGRVKVLLEENPDI VVFSKTK +   EA+                     +Q
Sbjct: 181 PHIVIATPGRVKVLLEENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ 240

Query: 305 LEIFEFKETEEIEN---------------------------------------------- 364
             +F    T+++E                                               
Sbjct: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSK 300

Query: 365 --DSKVRSD-------------------------ALASWKTIG------YCYGQNHV--- 398
             D  +RS                          AL S+K+        Y +    V   
Sbjct: 301 MEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPVL 360

[Close]

BLAST of Csor.00g103440 vs. ExPASy TrEMBL
Match: A0A1S3C309 (DEAD-box ATP-dependent RNA helicase 36 OS=Cucumis melo OX=3656 GN=LOC103496288 PE=3 SV=1)

HSP 1 Score: 336 bits (861), Expect = 5.93e-108
Identity = 232/495 (46.87%), Postives = 269/495 (54.34%), Query Frame = 0


Query: 65  LNKVIIVDENFPLFSKPHRKNPKPSENPSAALVSSAVDNVAPEKPLPVEKSTELGTKFAD 124
           +++ +IVD NFPLFSKPHRK  KPSENP+AA     V+N+AP+  L +EKSTEL TK  +
Sbjct: 1   MDQEVIVDANFPLFSKPHRKKHKPSENPTAA-----VENIAPKSSLQIEKSTELTTKSTN 60

Query: 125 DVAFANLGLSEAIVRTCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI 184
           +V F++LGLSE IV+TC+EL MKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI
Sbjct: 61  NVTFSDLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI 120

Query: 185 LQRLSETHFGIFALVINPTRELEYQLAEQFRALGSGLNLRCSVVVGGMDMLNQTQSLLKR 244
           LQRLSET FG+FALV+ PTREL YQLAEQFRALGS LNLRCSVVVGGMDML+QTQSLLKR
Sbjct: 121 LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLSQTQSLLKR 180

Query: 245 PHIVIATPGRVKVLLEENPDIHVVFSKTKLIDAIEANL-------------------GKQ 304
           PHIVIATPGRVKVLLEENPDI VVFSKTK +   EA+                     +Q
Sbjct: 181 PHIVIATPGRVKVLLEENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ 240

Query: 305 LEIFEFKETEEIEN---------------------------------------------- 364
             +F    T+++E                                               
Sbjct: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSK 300

Query: 365 --DSKVRSD-------------------------ALASWKTIG------YCYGQNHV--- 398
             D  +RS                          AL S+K+        Y +    V   
Sbjct: 301 MEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPVL 360

[Close]

BLAST of Csor.00g103440 vs. TAIR 10
Match: AT1G16280.1 (RNA helicase 36 )

HSP 1 Score: 228.0 bits (580), Expect = 1.3e-59
Identity = 123/202 (60.89%), Postives = 145/202 (71.78%), Query Frame = 0


Query: 83  RKNPKPSENPSAALVSSAVDNVAPEK---PLPVEKSTELGTKFADDVAFANLGLSEAIVR 142
           RKNPK   N  +  + S  +    EK   P P   +T           F  LGL+E  V 
Sbjct: 19  RKNPKTVVNIQSQKLDSDQNTPQFEKFTNPNPSSDTTSA-------TNFEGLGLAEWAVE 78

Query: 143 TCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLSETHFGIFALV 202
           TC+EL M+KPT VQTHC+PKILAG DVLG+AQTGSGKTAAFALPIL RL+E  +G+FALV
Sbjct: 79  TCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHRLAEDPYGVFALV 138

Query: 203 INPTRELEYQLAEQFRALGSGLNLRCSVVVGGMDMLNQTQSLLKRPHIVIATPGRVKVLL 262
           + PTREL +QLAEQF+ALGS LNLRCSV+VGGMDML QT SL+ RPHIVI TPGR+KVLL
Sbjct: 139 VTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRPHIVITTPGRIKVLL 198

Query: 263 EENPDIHVVFSKTKLIDAIEAN 282
           E NPD+  VFS+TK +   EA+
Sbjct: 199 ENNPDVPPVFSRTKFLVLDEAD 213

HSP 2 Score: 47.8 bits (112), Expect = 2.5e-05
Identity = 28/48 (58.33%), Postives = 38/48 (79.17%), Query Frame = 0


Query: 351 TQVYKASYVAKMKMVDDGFEEKAKER----KKTLAEKGLLKQRSKRRR 395
           T+V KA  VA MKM+D+GFE+K K+R    +KTLA+KGLLK+R KR++
Sbjct: 440 TKVSKAKRVAMMKMLDNGFEDKVKDRRKLKRKTLADKGLLKKRGKRQK 487

[Close]

BLAST of Csor.00g103440 vs. TAIR 10
Match: AT5G60990.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 145.2 bits (365), Expect = 1.1e-34
Identity = 79/187 (42.25%), Postives = 113/187 (60.43%), Query Frame = 0


Query: 128 FANLGLSEAIVRTCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQR 187
           FA LG+ E +V+ CE L  K P+ +Q   +P  L G DV+G+AQTGSGKT AFA+PILQ 
Sbjct: 11  FAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQA 70

Query: 188 LSETHF------------GIFALVINPTRELEYQLAEQFRALGSGLNLRCSVVVGGMDML 247
           L E  +              FA V++PTREL  Q+AEQF ALG+ ++LRC+V+VGG+D +
Sbjct: 71  LLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDRM 130

Query: 248 NQTQSLLKRPHIVIATPGRVKVLLEENPDIHVVFSKTKLIDAIEANLGKQLEIFEFKETE 303
            QT +L KRPH+++ATPGR+   + +     +   K  ++D  +  L +  E    +  E
Sbjct: 131 QQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILE 190

[Close]

BLAST of Csor.00g103440 vs. TAIR 10
Match: AT4G16630.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 113.6 bits (283), Expect = 3.7e-25
Identity = 64/144 (44.44%), Postives = 83/144 (57.64%), Query Frame = 0


Query: 115 STELGTKFADDVAFANLGLSEAIVRTCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGS 174
           ST  G  F  D  F  L LS  ++R CE L  KKPT +Q  CIP  L G D+   A TGS
Sbjct: 157 STVDGVSFHAD-TFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGS 216

Query: 175 GKTAAFALPILQRLSETHFGIFA---LVINPTRELEYQLAEQFRALGSGLNLRCSVVVGG 234
           GKTAAFALP L+RL      +FA   L++ PTREL  Q+    + L    +++C ++VGG
Sbjct: 217 GKTAAFALPTLERLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGG 276

Query: 235 MDMLNQTQSLLKRPHIVIATPGRV 256
           + +  Q   L   P IV+ATPGR+
Sbjct: 277 LSVREQEVVLRSMPDIVVATPGRM 299

[Close]

BLAST of Csor.00g103440 vs. TAIR 10
Match: AT1G77030.1 (hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases )

HSP 1 Score: 107.5 bits (267), Expect = 2.6e-23
Identity = 57/140 (40.71%), Postives = 89/140 (63.57%), Query Frame = 0


Query: 128 FANLGLSEAIVRTCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQR 187
           F +L L   +    ++   K PT +Q   +P IL+G+DV+ +A+TGSGKTAAF +P+L++
Sbjct: 30  FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89

Query: 188 LSE--THFGIFALVINPTRELEYQLAEQFRALGSGLNLRCSVVVGGMDMLNQTQSLLKRP 247
           L +     G+ AL+++PTR+L  Q  +  + LG   +LR S++VGG  M +Q + L K P
Sbjct: 90  LKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTKGP 149

Query: 248 HIVIATPGRVKVLLEENPDI 266
            ++IATPGR+  LL E  D+
Sbjct: 150 DVIIATPGRLMHLLSEVDDM 169

[Close]

BLAST of Csor.00g103440 vs. TAIR 10
Match: AT2G47330.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 95.5 bits (236), Expect = 1.0e-19
Identity = 53/138 (38.41%), Postives = 79/138 (57.25%), Query Frame = 0


Query: 128 FANLGLSEAIVRTCEELAMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQR 187
           F + G S  I+   ++ A +KPTA+Q   +P +L+G DV+GIA+TGSGKTAAF LP++  
Sbjct: 230 FEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVH 289

Query: 188 LS-----ETHFGIFALVINPTRELEYQLAEQFRALGSGLNLRCSVVVGGMDMLNQTQSLL 247
           +      +   G   ++  PTREL +Q+  + +       LR S V GGM    Q + L 
Sbjct: 290 IMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELK 349

Query: 248 KRPHIVIATPGRVKVLLE 261
               IV+ATPGR+  +L+
Sbjct: 350 AGCEIVVATPGRLIDMLK 367

The following BLAST results are available for this feature:

BLAST of Csor.00g103440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SA27	1.9e-58	60.89	DEAD-box ATP-dependent RNA helicase 36 OS=Arabidopsis thaliana OX=3702 GN=RH36 P...	[more]
Q8L4E9	1.7e-46	47.09	DEAD-box ATP-dependent RNA helicase 36 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9Y6V7	9.7e-39	61.72	Probable ATP-dependent RNA helicase DDX49 OS=Homo sapiens OX=9606 GN=DDX49 PE=1 ...	[more]
Q4FZF3	1.7e-38	60.94	Probable ATP-dependent RNA helicase DDX49 OS=Mus musculus OX=10090 GN=Ddx49 PE=2...	[more]
Q55BR9	3.1e-37	45.73	Probable ATP-dependent RNA helicase ddx49 OS=Dictyostelium discoideum OX=44689 G...	[more]

BLAST of Csor.00g103440 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6570593.1	5.57e-293	100.00	DEAD-box ATP-dependent RNA helicase 36, partial [Cucurbita argyrosperma subsp. s...	[more]
KAG7010444.1	8.56e-180	72.41	DEAD-box ATP-dependent RNA helicase 36, partial [Cucurbita argyrosperma subsp. a...	[more]
XP_022986070.1	8.17e-128	91.16	DEAD-box ATP-dependent RNA helicase 36-like isoform X2 [Cucurbita maxima]	[more]
XP_022986069.1	9.04e-128	91.16	DEAD-box ATP-dependent RNA helicase 36-like isoform X1 [Cucurbita maxima]	[more]
XP_038900331.1	1.75e-111	47.28	DEAD-box ATP-dependent RNA helicase 36 [Benincasa hispida]	[more]

BLAST of Csor.00g103440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JD07	3.96e-128	91.16	DEAD-box ATP-dependent RNA helicase 36-like isoform X2 OS=Cucurbita maxima OX=36...	[more]
A0A6J1JF19	4.37e-128	91.16	DEAD-box ATP-dependent RNA helicase 36-like isoform X1 OS=Cucurbita maxima OX=36...	[more]
A0A0A0KD72	2.88e-108	45.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G136530 PE=3 SV=1	[more]
A0A5D3CBL8	5.93e-108	46.87	DEAD-box ATP-dependent RNA helicase 36 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3C309	5.93e-108	46.87	DEAD-box ATP-dependent RNA helicase 36 OS=Cucumis melo OX=3656 GN=LOC103496288 P...	[more]

BLAST of Csor.00g103440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16280.1	1.3e-59	60.89	RNA helicase 36	[more]
AT5G60990.1	1.1e-34	42.25	DEA(D/H)-box RNA helicase family protein	[more]
AT4G16630.1	3.7e-25	44.44	DEA(D/H)-box RNA helicase family protein	[more]
AT1G77030.1	2.6e-23	40.71	hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-d...	[more]
AT2G47330.1	1.0e-19	38.41	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 145..315 e-value: 8.3E-22 score: 88.4
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 157..275 score: 16.633011
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 101..301 e-value: 1.7E-44 score: 153.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 124..263
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 150..262 e-value: 7.6E-27 score: 94.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 380..406
None	No IPR available	PANTHER	PTHR24031:SF240	ATP-DEPENDENT RNA HELICASE DDX49-RELATED	coord: 126..274
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 126..274
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 126..154 score: 9.481581

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g103440.m02	Csor.00g103440.m02	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003724	RNA helicase activity