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Csor.00g103290 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGGAGAACTGCCGCCGGTACCGGCTCCGTTGTCCATCCACCCGGCCGTAGCACCGCTATCATTTTTACTTGGAACATGGAGAGGCAAAGGCGACGGTGGATTCCCCACCATTAATTCCTTCTCTTACGGCGAGGAGATCCATTTCTCCCATTCCGGCAAGGTAACCTTTAACTCCCTGTTCTTCGTCTCTATTTGTTGTTTTCGCTGATATCATCTTAATATAGTTATAATTATCTCATTCCACGCGGTTGGATTTTGCTTTTTTTGTCTAATCGGTTATCTTCGTTGTTTGGGGATTTTTTTAATACGATGATTGTGGGAGAAGCCAGTGATTTCTTACAGCCAAAAGACTTGGAAACTCGATTCTAGAGAGCCTATGCACGCTGAGAGTGGCTACTGGCGTCCCAAGCCCGATGGTACCATTGAAGTTGTAATCGCTCAAAGCACTGGTCTCGTTGAAGTTCAGGTCAAAATCGCTGTCTCTTTCTCGTGTGCTCTACCGTTACATTCAAATTCGTAGGCTAAAAGAGAATTGTGGTTGAATATAGACGTGCTTATGTTCTCTGATTTTCATTTTGCGAAGAATGATTGAAACACACGGATTTGTGACATGATGCAAAGTGGCTCTATGCTGTATGTGATCTAACAATATAATCGATCTTGTTTGTTGAAATGAAATCTTCCTTTTTCCCTCATCTGGCCTTGTCTTTCCCACGAAAACAAACGGCCACGTTTTCAAACCATTGAAAATCTCAGTCGCCATCTTGTAAATTGAAACCATTCAATTACTCACTCCATGGCCTACACCTTGGATTGTTTAACTATACTGTCACTGTCAACCATATCACAATTGCTACGTTAGATTCTGCAGAGTTGCAACTGCACACCAGCTGCTCGATCCAATGGCCGACACAAATATAAAAAGGTTTAGGTAATTCATTATTTGTGAAGGAAATCATGTATAAAAAAGTTGGTAGTTCATTTGAAAGTCAGCTTTATGGATAGAATATGTAGTTAAAGTGGATAAGTCTGAAATGAAATTAACCATCATGGGCTTGCCTGGTGGTCAACAAGGTCATGGATCGAAAGGGTCTAGAGGAAATGAGTTCAATCCATGGTGACCACTTACCTAAGGTTTAATTTAGTTTCCTTGACATCCGAATATTTTATAGGGTCAAGGCGGTTGTCCCGTGAGATTAAAACTGACCTAAACACTCATAGTTGTGAAAAATGAAACTAAACTGCTCAAATCCCTCCTCCATATGGATGTGTCAAAATTGATCAAACTATAAGTTTTTTTTGTCTTAGCTGCTGATCTTCTTGTGCTCAGTTTTTTATCTGTGCTTTGAGCTTGTGGTGTTGGTGTAGATTGCCTTTCTTTGTTTTCACTTGCTGTGTGCATATTCTTCACACAACAGAAAGGAGCAGGTGTTCTGGTGAACTAGATAAGAAGGGAAATAAGCCACATTAAATTCAAGGTTCTAGGAAGGTTCTCTTAATAGGATTGAATTTAGAAATAAATCAGCTGCAATTTCTGATGATTAGATGTGACTTTTAGCTGAAGAAAAAGAAGAAAAATTTATTCATATTACTTGCTAGTGAGCTTTCACATTGCCATAAAAGCTCTGGTTTCTAGCCAATTTTAATTTGCTTTTGGCAGTGAAATTTTATAACTAGTATTATTTTCATCAGTATCATTAAACTTCTGAATATTGTTTTCCATTTTCTAAAACTGGGAAGATTATTGCAATGCAACTAATGGAGACGTTTGTTTTACCTTCCATGTAATATAACTCGATTTTTATCTCTCTTCCAGAAAGGAACATATAATGCAGAAGAGAAAGTGATAATGCTCCAAAGTGAAGTTGTCGGGAATGCTTCTAAGGTAACGTTTACTAGATCATCATTATTCAGGGCCATTTCAAATACGGACATATTATTTTTAGGTTTCAAATTTTGTTGTTCCATGATACTGATAGTTAATTGTCATCCCTGCTAACTATGGCAAGTAAAAACCTTATAGGATAAACGTACGTGTTAGACCTTTGTGACTTAGGGTTAAGAAGTTAAAGCCTTGCTTTGGTTGTTAGATCTGTGTGACTTGGGGCTCGTCCTAACAGTTTATGAACCCAAGCTTATGTGTAATAGTCCAAGCCCACCGTTAAGGAGATATTGTCTGCTTTGCCCATTATATATTGCCGTCAGCCTCATGGTTTTAAAACGCTTCTACTAGAAAGAGGTTTCCACACCCTTGTAAGAAATGCTTCGTTCTCCTCTCTAACCAACGTGGGATCTCACAATCCACCCCCTTTGGAGGTCCAACATCCTTGCTGGCACACCGCCCGGTATTTGGCTCTAATACTATTTGTAACAACTCAAGCCTACCGCCAGCAGTATTGTCCGCTTTGGCCTGTTATATATCGCTGTTAGTCTCACGGTTTTAAAATGCGTCTACTAGGAAAAGGTTTCAACACCCTTATAAAGAATGTTTTGTTCTTCTCTCCAACTATTGTGAGATCTCACATCTTTCTATACAAATCCTTCTAAATGATAAACCTTTGAACTAAATATCATAATAGGAACTCAAGTTTCTATAATTTATTTGTTTATACAATCCAAACACAAGTGTTACACAAACCTAAATGTCCCACTTCTAGGCTTCATAATGAGAGACTTTAAAATCATGAGCCAAACATCCCTTTATAACTGTACAAATGATTTGACTCTATAAGAGACAATACTTGAACCCGAAAACAGCGCGTTAGGAAAGAGATACATTATCATTAACCAATGGAAAACTGCTCGTCCCCGTTTGTATTAGATCAATACAACGTACCAGACAGAACTAGGATCTTTTTTTCCCTTCATTTTTTTTATGGCGAATGGTTTCCTCTCGTCCCCATTCGGTTTCCTTCTCCTTTTGCTCGCATTGCATGCATCAATAATTTATAATACTGATCAACATACCAAAGTCCCAGACAAAGCCAAACTATTTACCTGTCTCTATGGAACAGGTGAAAGAAATAAGCAGAGCGTTTAAACTGGTGGATGGAGAACTTTCCTACGTGGTTCAGATGGCTACTGGCTTAACCAGTCTTCAACAACACTTGAAAGCCTCGCTTACTAAAGTTTGA ATGGACGGAGAACTGCCGCCGGTACCGGCTCCGTTGTCCATCCACCCGGCCGTAGCACCGCTATCATTTTTACTTGGAACATGGAGAGGCAAAGGCGACGGTGGATTCCCCACCATTAATTCCTTCTCTTACGGCGAGGAGATCCATTTCTCCCATTCCGGCAAGCCAGTGATTTCTTACAGCCAAAAGACTTGGAAACTCGATTCTAGAGAGCCTATGCACGCTGAGAGTGGCTACTGGCGTCCCAAGCCCGATGGTACCATTGAAGTTGTAATCGCTCAAAGCACTGGTCTCGTTGAAGTTCAGAAAGGAACATATAATGCAGAAGAGAAAGTGATAATGCTCCAAAGTGAAGTTGTCGGGAATGCTTCTAAGGTGAAAGAAATAAGCAGAGCGTTTAAACTGGTGGATGGAGAACTTTCCTACGTGGTTCAGATGGCTACTGGCTTAACCAGTCTTCAACAACACTTGAAAGCCTCGCTTACTAAAGTTTGA ATGGACGGAGAACTGCCGCCGGTACCGGCTCCGTTGTCCATCCACCCGGCCGTAGCACCGCTATCATTTTTACTTGGAACATGGAGAGGCAAAGGCGACGGTGGATTCCCCACCATTAATTCCTTCTCTTACGGCGAGGAGATCCATTTCTCCCATTCCGGCAAGCCAGTGATTTCTTACAGCCAAAAGACTTGGAAACTCGATTCTAGAGAGCCTATGCACGCTGAGAGTGGCTACTGGCGTCCCAAGCCCGATGGTACCATTGAAGTTGTAATCGCTCAAAGCACTGGTCTCGTTGAAGTTCAGAAAGGAACATATAATGCAGAAGAGAAAGTGATAATGCTCCAAAGTGAAGTTGTCGGGAATGCTTCTAAGGTGAAAGAAATAAGCAGAGCGTTTAAACTGGTGGATGGAGAACTTTCCTACGTGGTTCAGATGGCTACTGGCTTAACCAGTCTTCAACAACACTTGAAAGCCTCGCTTACTAAAGTTTGA MDGELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTKV Homology
BLAST of Csor.00g103290 vs. ExPASy Swiss-Prot
Match: O64527 (UPF0678 fatty acid-binding protein-like protein At1g79260 OS=Arabidopsis thaliana OX=3702 GN=At1g79260 PE=1 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 1.8e-60 Identity = 117/162 (72.22%), Postives = 137/162 (84.57%), Query Frame = 0
BLAST of Csor.00g103290 vs. ExPASy Swiss-Prot
Match: B2HLY1 (UPF0678 fatty acid-binding protein-like protein MMAR_1995 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) OX=216594 GN=MMAR_1995 PE=3 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 1.6e-27 Identity = 66/158 (41.77%), Postives = 97/158 (61.39%), Query Frame = 0
BLAST of Csor.00g103290 vs. ExPASy Swiss-Prot
Match: A0PT73 (UPF0678 fatty acid-binding protein-like protein MUL_3360 OS=Mycobacterium ulcerans (strain Agy99) OX=362242 GN=MUL_3360 PE=3 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 2.6e-27 Identity = 66/158 (41.77%), Postives = 97/158 (61.39%), Query Frame = 0
BLAST of Csor.00g103290 vs. ExPASy Swiss-Prot
Match: A0R6J8 (UPF0678 fatty acid-binding protein-like protein MSMEG_6574/MSMEI_6396 OS=Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) OX=246196 GN=MSMEG_6574 PE=3 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 7.7e-27 Identity = 67/158 (42.41%), Postives = 98/158 (62.03%), Query Frame = 0
BLAST of Csor.00g103290 vs. ExPASy Swiss-Prot
Match: Q73W27 (UPF0678 fatty acid-binding protein-like protein MAP_2833c OS=Mycolicibacterium paratuberculosis (strain ATCC BAA-968 / K-10) OX=262316 GN=MAP_2833c PE=3 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 2.9e-26 Identity = 63/156 (40.38%), Postives = 92/156 (58.97%), Query Frame = 0
BLAST of Csor.00g103290 vs. NCBI nr
Match: XP_022943798.1 (UPF0678 fatty acid-binding protein-like protein At1g79260 [Cucurbita moschata] >KAG6570608.1 UPF0678 fatty acid-binding protein-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 331 bits (848), Expect = 2.34e-114 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0
BLAST of Csor.00g103290 vs. NCBI nr
Match: XP_023512065.1 (UPF0678 fatty acid-binding protein-like protein At1g79260 [Cucurbita pepo subsp. pepo] >XP_023512066.1 UPF0678 fatty acid-binding protein-like protein At1g79260 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 328 bits (842), Expect = 1.93e-113 Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 0
BLAST of Csor.00g103290 vs. NCBI nr
Match: KAG7010458.1 (UPF0678 fatty acid-binding protein-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 326 bits (836), Expect = 1.64e-112 Identity = 164/165 (99.39%), Postives = 164/165 (99.39%), Query Frame = 0
BLAST of Csor.00g103290 vs. NCBI nr
Match: XP_022986194.1 (UPF0678 fatty acid-binding protein-like protein At1g79260 isoform X2 [Cucurbita maxima] >XP_022986195.1 UPF0678 fatty acid-binding protein-like protein At1g79260 isoform X2 [Cucurbita maxima]) HSP 1 Score: 326 bits (835), Expect = 2.25e-112 Identity = 161/164 (98.17%), Postives = 162/164 (98.78%), Query Frame = 0
BLAST of Csor.00g103290 vs. NCBI nr
Match: XP_038900799.1 (UPF0678 fatty acid-binding protein-like protein At1g79260 [Benincasa hispida]) HSP 1 Score: 314 bits (804), Expect = 1.20e-107 Identity = 153/164 (93.29%), Postives = 158/164 (96.34%), Query Frame = 0
BLAST of Csor.00g103290 vs. ExPASy TrEMBL
Match: A0A6J1FXD9 (UPF0678 fatty acid-binding protein-like protein At1g79260 OS=Cucurbita moschata OX=3662 GN=LOC111448438 PE=4 SV=1) HSP 1 Score: 331 bits (848), Expect = 1.13e-114 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0
BLAST of Csor.00g103290 vs. ExPASy TrEMBL
Match: A0A6J1JFE2 (UPF0678 fatty acid-binding protein-like protein At1g79260 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484010 PE=3 SV=1) HSP 1 Score: 326 bits (835), Expect = 1.09e-112 Identity = 161/164 (98.17%), Postives = 162/164 (98.78%), Query Frame = 0
BLAST of Csor.00g103290 vs. ExPASy TrEMBL
Match: A0A0A0KAL2 (DUF1794 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G134380 PE=3 SV=1) HSP 1 Score: 305 bits (781), Expect = 2.30e-104 Identity = 153/170 (90.00%), Postives = 157/170 (92.35%), Query Frame = 0
BLAST of Csor.00g103290 vs. ExPASy TrEMBL
Match: A0A1S3C440 (UPF0678 fatty acid-binding protein-like protein At1g79260 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496266 PE=3 SV=1) HSP 1 Score: 305 bits (780), Expect = 2.85e-104 Identity = 152/166 (91.57%), Postives = 156/166 (93.98%), Query Frame = 0
BLAST of Csor.00g103290 vs. ExPASy TrEMBL
Match: A0A6J1D7N5 (UPF0678 fatty acid-binding protein-like protein At1g79260 OS=Momordica charantia OX=3673 GN=LOC111018028 PE=3 SV=1) HSP 1 Score: 296 bits (758), Expect = 6.01e-101 Identity = 145/164 (88.41%), Postives = 152/164 (92.68%), Query Frame = 0
BLAST of Csor.00g103290 vs. TAIR 10
Match: AT1G79260.1 (CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1794 (InterPro:IPR014878); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 233.4 bits (594), Expect = 1.3e-61 Identity = 117/162 (72.22%), Postives = 137/162 (84.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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