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Csor.00g103280 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGAGAAAAGCAAGAACAGCGGTGGGGAAAGAAAGTGTGTCCAAAAAGAAAAAGAAAAACGAAAGAATCGAGAGATAAAATCGGGTCTAACAGTTCCATATCCGTGAGCTTTTCCTTCCAATAGGTTTCGTTATCTGTTCCTCACTAAGCCGTCACTCTTTTTGGTTCTCCACTTCCTTCGTGAATCGAGAGGTTTTCTTCCGGATCTTCATCAGGTATATCTCCTATTTTCTCCATTTCATCCTCATTTTGTTGTCCAATCGTCTGAATCTTATCGTTTTCCTGCGATCAACGTTCAACTCTGTGAGGTATTTGGATTTCTTTCGCTTCGTATTCTCTTGCTGGTAGCGACGATTGATTTTTCTCTCGCTCTTCGTTTTAATGCGTTCGTCAAGCTCTGCTCGACTGATTGATTGTTTTTCCTTACTGATGTGCTGATCGATTCCTTTTTCTTCTTCCGTTCTTTTGTACTCAGTATATTTAGTGTACTGATCTCGGTTTTAGCGAGCTGGATCGATTTTGAATCCTGTTTTGTATTACGGACGTTTAATTCGTCATCCGCACTTTCCCTTACACGTTTGTCTGCATTAGATCTTCATATTCATGGAGTAAATTACTACAGATAGGTAAGTAGTTTAATATAGATGAGCTGAGCTAATTTATTTCGTAAGTGAAGTCTAGCAACTAACTCGGTGGAAAGAGGAAAAATTAGTCATCTCACGTCATGTTAGGAATTTCTGTACATACATTATTGTGCATCAATTGTCAAGGTTCTTCCAGGCTGTTGTTTCTTGTTTTTTTGCTAGGTGGATTTCTAGAGGTAAATTATAAATTAATTGTTAAATTACAAATTTAGTCTATAAATTTTGAGGTATGTATCTATTCGTCCTCTAAATTTTCAAAAGTATCTTATATATCTCTAAATTTTTAATTTGTGTCTAAAAGGTTCTTAGAAAATTCAAATTTTTGTGAAATTAGTTGATATAATTTTAGTTCCAATGAAGCCTTAACTAAATGATTTTTTGAAAAATTTTAAAGTTTAGTGACAACTAAATAAAACAAATCTTACACTCTAGTAACTAAAATTCTAGTTTAATGTAATAATTTACTAATGTTTTAAATCATTATCAAGGGTGTATTTGTAACGGACTGCTGTTTTCTGATATGGCGCTTCAAAGAGAGCTTATTGTACACATTTTTAAGCGTTTGCTTGAACAGGTGAAGATGCAAGGTGCTGTGCGATCATTTCTATCACATGGAAACATTGTGAAAACTGCTGTTCTGCAACAACTTCGTGTAGCAAACCCCTGTATGAGGCCTGCAATGCTTTCACGCTTTACAACATCAACCAGTTCCGCAAACATTGAAGAGCATGGCTTTGAAAGCACTACGATTGATGACATCTTGAAAGCAAAAGGCAAAAGTGCTGACGGATCATGGCTTTGGTGCACCACAGATGACACAGTTTATGATGCCGTTCAGTCGGTACGCTTCCTTTTGGGAGTTGTTTCTCTTGAACATTTTTATATTTTTTTCATTGTTTTGATTAGAACTTTGTTAAAAAAAAAAAAAATTGTTTTCTTCTGCTGTTCTTGCTTACACACTCCCCCTTGGTTTACATAAAAAAGATGACCCAGCACAATGTTGGAGCCTTGGTGGTTGTTAAACCTGCGGAGCAAAATTCAATAGCTGGTATTATAACAGAGAGAGGTACGTGATACAATAAGCTCTGAATAAATGGTTTCAACTACAAAATCTATGGTTCTATCCTAATTTAGAATGAAGAGATTCATTTATACTGTAGTTTGGGACAACTAGCAAATGTATGTACTCAGAAGTCTTTAGGTTCCAGCATTCTGCAATTGGCTGATTTTTGGAAATTCATACTTCTGATCAGTTCCCATTAAGATTGCTAGTCTTTTATTGGTTTTTCGGTGGAGATTTCAAAGTGAGCTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATGTTGTTTTTGGGTGGAGTAAATTTGCATTATTTCCGTGAGTTTTGGGTACCCAAAATGGTTTCTACTTATGATTGTGCCGTGTAGAACTAAAACCCATGTAGAGATTACTCCTACATCGTGGCTTTTCCTCTTTTTTTGCCATTTCTCCTCATATTCTCCTTCAGTTTTTCTTGTACTATAACCATAGAAGGTTAGTTCTAAGCTTTAGGTCCAATGAAGGCATCTTTCTTGTCTTTTGGAAAGTAATATCTGAATTCTGAGCCTTTCTTTTCACACATTTCTAGATTATCTGGAATGTAATATCTGAATTCTGAGCTTTTCTTTTCACACATTTCTAGATTATCTGAGAAAGATTATAGTGCAAGGCAGGTCCTCCAAGTCTACCAAAGTTGGGGATATCATGACTGAGGAGGTATGAACCTGTCACCTTTATATGTCAGCCAGCCTTATTTCTCTACTAGTTGCGTGAGCAATGACGGAAATTAGATGCTTTCAATTAAAAACAAAATTTAAGCCGAAATATCAACAATTTCATTCTATTTTCGTTTATTTGTGGTTGATTTCTTTTAAAATAGTTTCAATTAGCATTTCATTTATAAATTTTGGAAATGTATTTACAAATAATGTCTTTTCTTGCATGAAGTTATTATGGCTGCACAAAAGATCGACTCTTCCAAGTTCGAATAGCAATGACAAATTCCTTTAATTTTGCAGAACAAACTTATCACTGTGACACCTGACACCAAGGTTTTGCGAGCTATGCAACTTATGACTGGTATTACCTTACTTACTTTTTAGGTTAAATTATAAAAAAAACACCTCTCAATTTTACTTTTGTTTCGTTACGAAAAAATGTTAATTACCCTTAGAGTAGAAATTCTTTTATTATTTCCAAGTGGAAGTCGGGACTTGGAGGGTGGAATGATGTAGTTGCAATCTAGAATGGAAACTTTTGTACAAAATTCTAAAGAATTTCTACTTTAAAGATAGTTTTGAAACATTTATAAAACACCAATTGTAACTTTTGAAAGAATATGTTCAACGGCCTTTTTTTTTTTTTTTTCCTCGTTAAAGAAAAGGTTGTTTTTTTCAGTCTAGCTGCAATATATATTTATCACTACACCATGAAATATAACATGGAGTACTCTTGCTTGGTGGGCAGATAATCGAATTAGGCACATACCGGTCATCGATGACAAGGGTATGAAAGGCATGGTATCGATCGGAGACGTGGTTCGGGCTGTGGTGAGCGAGCACCGGGAGGAGCTAAACCGCCTGAATGCTTTCATTCAGGGAGGTTATTGA ATGGATGAGAAAAGCAAGAACAGCGGTGGGGAAAGAAAGTTTCGTTATCTGTTCCTCACTAAGCCGTCACTCTTTTTGGTTCTCCACTTCCTTCGTGAATCGAGAGGTTTTCTTCCGGATCTTCATCAGGTGAAGATGCAAGGTGCTGTGCGATCATTTCTATCACATGGAAACATTGTGAAAACTGCTGTTCTGCAACAACTTCGTGTAGCAAACCCCTGTATGAGGCCTGCAATGCTTTCACGCTTTACAACATCAACCAGTTCCGCAAACATTGAAGAGCATGGCTTTGAAAGCACTACGATTGATGACATCTTGAAAGCAAAAGGCAAAAGTGCTGACGGATCATGGCTTTGGTGCACCACAGATGACACAGTTTATGATGCCGTTCAGTCGATGACCCAGCACAATGTTGGAGCCTTGGTGGTTGTTAAACCTGCGGAGCAAAATTCAATAGCTGGTATTATAACAGAGAGAGATTATCTGAGAAAGATTATAGTGCAAGGCAGGTCCTCCAAGTCTACCAAAGTTGGGGATATCATGACTGAGGAGAACAAACTTATCACTGTGACACCTGACACCAAGGTTTTGCGAGCTATGCAACTTATGACTGATAATCGAATTAGGCACATACCGGTCATCGATGACAAGGGTATGAAAGGCATGGTATCGATCGGAGACGTGGTTCGGGCTGTGGTGAGCGAGCACCGGGAGGAGCTAAACCGCCTGAATGCTTTCATTCAGGGAGGTTATTGA ATGGATGAGAAAAGCAAGAACAGCGGTGGGGAAAGAAAGTTTCGTTATCTGTTCCTCACTAAGCCGTCACTCTTTTTGGTTCTCCACTTCCTTCGTGAATCGAGAGGTTTTCTTCCGGATCTTCATCAGGTGAAGATGCAAGGTGCTGTGCGATCATTTCTATCACATGGAAACATTGTGAAAACTGCTGTTCTGCAACAACTTCGTGTAGCAAACCCCTGTATGAGGCCTGCAATGCTTTCACGCTTTACAACATCAACCAGTTCCGCAAACATTGAAGAGCATGGCTTTGAAAGCACTACGATTGATGACATCTTGAAAGCAAAAGGCAAAAGTGCTGACGGATCATGGCTTTGGTGCACCACAGATGACACAGTTTATGATGCCGTTCAGTCGATGACCCAGCACAATGTTGGAGCCTTGGTGGTTGTTAAACCTGCGGAGCAAAATTCAATAGCTGGTATTATAACAGAGAGAGATTATCTGAGAAAGATTATAGTGCAAGGCAGGTCCTCCAAGTCTACCAAAGTTGGGGATATCATGACTGAGGAGAACAAACTTATCACTGTGACACCTGACACCAAGGTTTTGCGAGCTATGCAACTTATGACTGATAATCGAATTAGGCACATACCGGTCATCGATGACAAGGGTATGAAAGGCATGGTATCGATCGGAGACGTGGTTCGGGCTGTGGTGAGCGAGCACCGGGAGGAGCTAAACCGCCTGAATGCTTTCATTCAGGGAGGTTATTGA MDEKSKNSGGERKFRYLFLTKPSLFLVLHFLRESRGFLPDLHQVKMQGAVRSFLSHGNIVKTAVLQQLRVANPCMRPAMLSRFTTSTSSANIEEHGFESTTIDDILKAKGKSADGSWLWCTTDDTVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMTDNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELNRLNAFIQGGY Homology
BLAST of Csor.00g103280 vs. ExPASy Swiss-Prot
Match: Q9LEV3 (CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CBSX3 PE=1 SV=1) HSP 1 Score: 333.2 bits (853), Expect = 2.6e-90 Identity = 166/206 (80.58%), Postives = 184/206 (89.32%), Query Frame = 0
BLAST of Csor.00g103280 vs. ExPASy Swiss-Prot
Match: P32987 (Uncharacterized 17.7 kDa protein in bps2 3'region OS=Acidianus ambivalens OX=2283 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 3.7e-12 Identity = 47/128 (36.72%), Postives = 76/128 (59.38%), Query Frame = 0
BLAST of Csor.00g103280 vs. ExPASy Swiss-Prot
Match: P50100 (Uncharacterized protein MK0525 OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) OX=190192 GN=MK0525 PE=4 SV=2) HSP 1 Score: 72.4 bits (176), Expect = 8.2e-12 Identity = 44/140 (31.43%), Postives = 77/140 (55.00%), Query Frame = 0
BLAST of Csor.00g103280 vs. ExPASy Swiss-Prot
Match: Q58069 (Uncharacterized protein MJ0653 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0653 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.4e-11 Identity = 38/113 (33.63%), Postives = 69/113 (61.06%), Query Frame = 0
BLAST of Csor.00g103280 vs. ExPASy Swiss-Prot
Match: P54606 (CBS domain-containing protein YhcV OS=Bacillus subtilis (strain 168) OX=224308 GN=yhcV PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 2.4e-11 Identity = 38/106 (35.85%), Postives = 65/106 (61.32%), Query Frame = 0
BLAST of Csor.00g103280 vs. NCBI nr
Match: KAG6570609.1 (CBS domain-containing protein CBSX3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 497 bits (1279), Expect = 3.50e-177 Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0
BLAST of Csor.00g103280 vs. NCBI nr
Match: KAG6605374.1 (CBS domain-containing protein CBSX3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 408 bits (1048), Expect = 4.37e-142 Identity = 213/241 (88.38%), Postives = 222/241 (92.12%), Query Frame = 0
BLAST of Csor.00g103280 vs. NCBI nr
Match: XP_022944521.1 (CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita moschata] >XP_023513221.1 CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 406 bits (1043), Expect = 6.46e-142 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of Csor.00g103280 vs. NCBI nr
Match: XP_022986939.1 (CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita maxima] >XP_022986940.1 CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita maxima]) HSP 1 Score: 402 bits (1032), Expect = 3.07e-140 Identity = 205/206 (99.51%), Postives = 205/206 (99.51%), Query Frame = 0
BLAST of Csor.00g103280 vs. NCBI nr
Match: KAG7035332.1 (CBS domain-containing protein CBSX3, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 395 bits (1016), Expect = 1.39e-137 Identity = 200/209 (95.69%), Postives = 205/209 (98.09%), Query Frame = 0
BLAST of Csor.00g103280 vs. ExPASy TrEMBL
Match: A0A6J1FUM7 (CBS domain-containing protein CBSX3, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111448953 PE=4 SV=1) HSP 1 Score: 406 bits (1043), Expect = 3.13e-142 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of Csor.00g103280 vs. ExPASy TrEMBL
Match: A0A6J1JHG9 (CBS domain-containing protein CBSX3, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111484529 PE=4 SV=1) HSP 1 Score: 402 bits (1032), Expect = 1.48e-140 Identity = 205/206 (99.51%), Postives = 205/206 (99.51%), Query Frame = 0
BLAST of Csor.00g103280 vs. ExPASy TrEMBL
Match: A0A6J1G8R5 (CBS domain-containing protein CBSX3, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111451778 PE=4 SV=1) HSP 1 Score: 391 bits (1005), Expect = 1.93e-136 Identity = 198/206 (96.12%), Postives = 202/206 (98.06%), Query Frame = 0
BLAST of Csor.00g103280 vs. ExPASy TrEMBL
Match: A0A6J1L768 (CBS domain-containing protein CBSX3, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111499790 PE=4 SV=1) HSP 1 Score: 391 bits (1005), Expect = 1.93e-136 Identity = 198/206 (96.12%), Postives = 202/206 (98.06%), Query Frame = 0
BLAST of Csor.00g103280 vs. ExPASy TrEMBL
Match: A0A1S3C2E8 (CBS domain-containing protein CBSX3, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103496262 PE=4 SV=1) HSP 1 Score: 390 bits (1003), Expect = 3.90e-136 Identity = 197/206 (95.63%), Postives = 204/206 (99.03%), Query Frame = 0
BLAST of Csor.00g103280 vs. TAIR 10
Match: AT5G10860.1 (Cystathionine beta-synthase (CBS) family protein ) HSP 1 Score: 333.2 bits (853), Expect = 1.8e-91 Identity = 166/206 (80.58%), Postives = 184/206 (89.32%), Query Frame = 0
BLAST of Csor.00g103280 vs. TAIR 10
Match: AT1G47271.1 (Cystathionine beta-synthase (CBS) family protein ) HSP 1 Score: 176.8 bits (447), Expect = 2.2e-44 Identity = 85/158 (53.80%), Postives = 121/158 (76.58%), Query Frame = 0
BLAST of Csor.00g103280 vs. TAIR 10
Match: AT3G52950.1 (CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein ) HSP 1 Score: 54.7 bits (130), Expect = 1.3e-07 Identity = 35/128 (27.34%), Postives = 66/128 (51.56%), Query Frame = 0
BLAST of Csor.00g103280 vs. TAIR 10
Match: AT3G52950.2 (CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein ) HSP 1 Score: 54.7 bits (130), Expect = 1.3e-07 Identity = 35/128 (27.34%), Postives = 66/128 (51.56%), Query Frame = 0
BLAST of Csor.00g103280 vs. TAIR 10
Match: AT2G36500.1 (CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein ) HSP 1 Score: 53.9 bits (128), Expect = 2.1e-07 Identity = 29/101 (28.71%), Postives = 56/101 (55.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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