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Csor.00g103230 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCAAACGTATTCTTAAAGAGCTCAAGGATTTACAGAAGGATCCTCCTACGTCTTGCAGCGCTGGTATATGAACTTTCCTTCCCTCTGCTCACCTGGTTTCTTCTTGTTTTTGCTCTGAACATCTGATCTTTATTGTTCATGATTGAGCAAGTGGAATGTTTGTTTCTACTGCGGCATCCTATTTTTGGTTCTCTTCTGTGAATTTCTTACTCAAGGACTTTATTTTTGTAAAAGGAACCTCGAAATTCATATGGTTATTGTCTTCATACGGTTTTCCTTAGGTCCTGTGGCGGAAGACATGTTTCATTGGCAAGCAACTATCATGGGACCTGCTGATTCTCCATATTCAGGAGGTGTATTCTTAGTTTCTATCCATTTCCCTCCGGACTATCCTTTCAAGCCGCCAAAGGTTAACTCCTTTCTGGTTTGAATCTTTGCATTTGTTCTTGTTGTTTCTTACACTCTTATGTACTGATATGGCCCATGAATCGATTTCCTTGCTTACTCGGACAGCCTGCAATATATCGGGATTGTTTTATTGAGAGTTTTCACTGAGCTTGATGCTCTTGATTTTGATAGTTTCATGCTCACTGTCATTGTAAACCGGTCTATGATTCCCAAAAACTGAACTCTTTAAACCTCGCAGGTTGCTTTTAGGACTAAGGTGTTCCACCCAAACATTAATAGCAATGGAAGCATATGTCTGGACATTCTTAAAGAACAGTGGAGCCCTGCGCTAACTATTTCTAAGGTTTGAATTTACAGTCTCTTGAAACGAACCAACTAAACTAGTTTCTATTGATTAATGGTGTTTGCACATGTCCTCTGTTTTTTCTGTAAACTATCTGTTACTTTGTTTTACTGCCACCAATTGGCTATATGCCCTATCGTAAGAGTCATATATTTATTCTCCGTTTTCTTGGAACTGTGAAGTCTGACTGAATGGCCTTGAAATTGATATTCTGTGTGTGGGTTTTTGCAATACGTAGGGATGAGATGTTCTTGTTTTCAATTTTATTGAGATCTTTGACTATTCTGAATTACAGATCCACTCTTTGATAGTTGTGTTGGTAAATTTCCCATTAGCATCGTGTTTTAGGTGGAGGCTAGGAGTATTGAGTGGGGTCTGGATCACTCTGAGGGGTCCCACTAGGAGTATTGAGTGGGGTCTGGATCACACTGAGGGGTCCCACATCGATTGGAGAAGGGAGCGAGTGCCAGTGATGACGTTGGGTCTCAAGGTGGATTGTGAAATCCCACATCGATTGGGAAGGAGAACGAAACTTTCTTCATAAGGGTGTGGAAACCCTCCTTAGCAGACACGTTTTAAAAACTTTGAGGGGAAGTCCAAAGAAGACAATATTTGCGAGCGAGGAAGCTGATCTCCAAAGGGGGTGGACATGAGGCGGTGTGCTAGTAAGGACGTTAAGCCCTGAAGGGGTGGATTGAGGGGTTCCACAGCAATTGGAGAAGGGAACGAGTGCCAAAGAGGACGCTGGGCCTTAAAGGATGGTGGATTGTGAGATCTCACATAGGTTGGGGATGAGAACGAAACATTCTTGTGTGAAAACTTCTCTCTGGCAGATGCATTTTAAAAACTCTGAGAGAAAACCCAAAGAGGACAATATCTCCGGGCTGTGGGCTTAGGGCCTCAAACGATTCTCCTTTTGAATTGTTACATAATTTCAGAAATTCCTTGATACTTGATAATTATCCACCTCTGTTGTCAGAATGTCCCAACTCTTAGTGTTTGAATATTTTTTCATCAAGGATTTCAGCTGGTAGTAAGAAATGTTCATAGAAATATTAGCTAGAGAAAGATTCTAAGTTTATCTCGATTAGTACTTCTCCCTGTTAAGCGGTGAAATGTCATCTCTTTGAATCGATCACATGATTAGAAACCTCGGAAAGCAACCTTGCATCCTTATTGATTCAAGCGGGAAAATTTTATGCATCCTTATTGCTATGCCTTCTGTAAATTAGCTGTTTTTATATGAATCCATTTGAAGTTAGAATCTTATAGTACTTTAACTCGAACTAAATATACTTCAGGTGCTGTTGTCCATATGCTCTCTGTTAACGGATCCCAACCCCGACGATCCCCTCGTCCCTGAAATTGCTCACATGTACAAGACTGATAGAGCCAAGTATGAAGGTACTGCACGCAGCTGGACTCAAAAGTATGCTATGGGATAGTTTCTACATCTAAACCCATCTCTCAGCTCTTAGAAGATAGAAGAAGCGGCTTGAATCTTACTTCTATGAACTTGAAGGAATGAAAGCCTCTGTATTCGTAAGACTTAAAGTTTTTGTAAGGAATTCAACTTTCATTGTGAATATCGATTTGAAGAGATTATATAATGTAAGTCCTTTAACTTATTGTCAAATGATTGGTTTTCATATTTGTTATGAGTTGGAAAGCTGTTTGATTGTCCTGTCCTGTTCCGTGGATCCAAGGGTTGGATTATTAGGATGATGATTAAACGATGAACTTAACCAACCTTTTGATACAAATCTTAGAATGTAGGAGATATTTCACAACAGATCTTGCCAACAGAGGACTGATAAGCTTTTAACTGTTGCCAACCACTTTGGACTTTCCTTCGGGCTTCTCCTCAGTTTTAAAACGTGTTTGCTAGGGAGAGATTTCCACTCTTATAAATAAGAGTTTGTTTCCTTCTTCAACTCACGTGGGATCTCACAATCTACCCCCTTCGGGGCCCAGTGTCTTTGCTAGCACTAGTTCCTCCTTCGAGGCCCAACGTTCTTGTTGGTACTCGTTCCTCTCTTCAAACGTGGGATCTCACACGAAAATTCATACTTCATAAGAATTTAGGCTGGATGGGAAAGCATATTATTGGGAATGAATCATTGAGTACCAATGTGTCCCTTTATTTATGAAAAGGGTCAAATATCGAAGTTGTGACAAAGAGCTTCTTTCAGTCACTACTATTATTGATCTAAATGGATCTCTTTAGCATCATTCATTCTTTTCTTCAATTCCTTCACCAAATCTCTATTATTAGTAGAATACAAATATGATTTCACTGCACAGAAGCATCTAAGCACATAATCTTTGAGTTTTACTCGTAGATCTGAGTCAATATGAGAGCCCACCCTGACTCTTTTAGCTTCTAGTGGGAAATGGGAGAAGCCAAAATATCAAGTCTTGTTGTCTTTGAATGTAAATTTCTCTCAACTTGCCTCGCAGGTGTACAGTCTCCTAACAACGTGGCCAATTCTCCTTGGAAGAAATCCCACCAAATAAACATGTATAATTTGAACATTCTTTGATTCTTTGCACTAATATTCCTATATATCTGCCTTCAACCTTCTTGCTTAGACTTGTGTTTTCCACTCCCAAGTCTTCCCTTTTCATTTTCTCTGCATATTCTTCTTCTACTTCTCCTTCTCCTGACTGTGGTTTCTGAAGTGAAAGGGGATTCTTGGTGGCTGATCCTTCAATCTTCTCTGTTTCTTGTTCAATTTGGTGTCTTTTGTGAAGCTAATTTGGATGATGTTCTTGCGTTTGATCCTTCTTCGTCTTTGTTTTGCTGATTTTACTGATTGATTGAGCTTCTTCTTGCTTTGTGACTCTGTTCTGTATCTGCGCACTTGTGAATTCTGATCTTAACCAAAAAGCTTCTCAGACTTGTTAGAGTGAGTGTTTTTTCAGATCTAACATGTCGGCGGCGGACATGGCTTCTTTGTCGGGGGACAGAGCTAACTGCCGCCGGAAACCGGCTGCTTCCGGGGACTCTGCAAAGCTGGAGCAAAAGCTTGTAAGGATCATCGTCACAGACGCCGACGCCACCGATTCGTCCAGTGAAGATGAATTGATTTTGGGATCAAGAACGGGAGTTAGAAGACAAGTAAGAGAGATCACAATTAATCGTTACTCTGTTCTTGATGGTTCTTCAGCAGAGTCCCCTGTTTCGGAGATTAGCAAGAAGCGGAATCGTAGATCACGTAGGTCCAAATCATCTTGCCGGAAGAAGTTCAGAGGAGTCAGACAGAGGGCTTGGGGCCGTTGGGCGGCGGAAATCCGGGATCCGATTCGCCGAAAGCGGATATGGCTTGGAACCTTTGATACGGCGGAAGAGGCGGCGGCGGTTTACGACCGAGCTGCTTTGGAACTCCAGGGCCCAAACGCCATAACGAACTTCTCCAGTGATGGGGCAGTTACAACGGCGGCCGACGGGGGTAACAAGCAGGAGGACGGCTTAGACTCACCCAAAACGACGGCGGTTTGGTCGCCGGCGTCAGTACTCCATTACGACGGCGTGTTTACTCCGATAGATGAGATGCTTTATTGTGGAGAGATCGATGAGTTCGAATTTGCCATGGCGACGGCTTGCTTGCCGGCGGCGCGGAGGCAGTACGGCGGCGAAGAAGATTTCGGGGAGTTGGAGCTGGACTTGGACTATTTCTTGGTTGACGTCATTTACTAA ATGGCTTCCAAACGTATTCTTAAAGAGCTCAAGGATTTACAGAAGGATCCTCCTACGTCTTGCAGCGCTGGTCCTGTGGCGGAAGACATGTTTCATTGGCAAGCAACTATCATGGGACCTGCTGATTCTCCATATTCAGGAGGTGTATTCTTAGTTTCTATCCATTTCCCTCCGGACTATCCTTTCAAGCCGCCAAAGGTTGCTTTTAGGACTAAGGTGTTCCACCCAAACATTAATAGCAATGGAAGCATATGTCTGGACATTCTTAAAGAACAGTGGAGCCCTGCGCTAACTATTTCTAAGGTGCTGTTGTCCATATGCTCTCTGTTAACGGATCCCAACCCCGACGATCCCCTCGTCCCTGAAATTGCTCACATGTACAAGACTGATAGAGCCAAGTATGAAGGTACTGCACGCAGCTGGACTCAAAAAGATTATATAATATCTAACATGTCGGCGGCGGACATGGCTTCTTTGTCGGGGGACAGAGCTAACTGCCGCCGGAAACCGGCTGCTTCCGGGGACTCTGCAAAGCTGGAGCAAAAGCTTGTAAGGATCATCGTCACAGACGCCGACGCCACCGATTCGTCCAGTGAAGATGAATTGATTTTGGGATCAAGAACGGGAGTTAGAAGACAAGTAAGAGAGATCACAATTAATCGTTACTCTGTTCTTGATGGTTCTTCAGCAGAGTCCCCTGTTTCGGAGATTAGCAAGAAGCGGAATCGTAGATCACGTAGGTCCAAATCATCTTGCCGGAAGAAGTTCAGAGGAGTCAGACAGAGGGCTTGGGGCCGTTGGGCGGCGGAAATCCGGGATCCGATTCGCCGAAAGCGGATATGGCTTGGAACCTTTGATACGGCGGAAGAGGCGGCGGCGGTTTACGACCGAGCTGCTTTGGAACTCCAGGGCCCAAACGCCATAACGAACTTCTCCAGTGATGGGGCAGTTACAACGGCGGCCGACGGGGGTAACAAGCAGGAGGACGGCTTAGACTCACCCAAAACGACGGCGGTTTGGTCGCCGGCGTCAGTACTCCATTACGACGGCGTGTTTACTCCGATAGATGAGATGCTTTATTGTGGAGAGATCGATGAGTTCGAATTTGCCATGGCGACGGCTTGCTTGCCGGCGGCGCGGAGGCAGTACGGCGGCGAAGAAGATTTCGGGGAGTTGGAGCTGGACTTGGACTATTTCTTGGTTGACGTCATTTACTAA ATGGCTTCCAAACGTATTCTTAAAGAGCTCAAGGATTTACAGAAGGATCCTCCTACGTCTTGCAGCGCTGGTCCTGTGGCGGAAGACATGTTTCATTGGCAAGCAACTATCATGGGACCTGCTGATTCTCCATATTCAGGAGGTGTATTCTTAGTTTCTATCCATTTCCCTCCGGACTATCCTTTCAAGCCGCCAAAGGTTGCTTTTAGGACTAAGGTGTTCCACCCAAACATTAATAGCAATGGAAGCATATGTCTGGACATTCTTAAAGAACAGTGGAGCCCTGCGCTAACTATTTCTAAGGTGCTGTTGTCCATATGCTCTCTGTTAACGGATCCCAACCCCGACGATCCCCTCGTCCCTGAAATTGCTCACATGTACAAGACTGATAGAGCCAAGTATGAAGGTACTGCACGCAGCTGGACTCAAAAAGATTATATAATATCTAACATGTCGGCGGCGGACATGGCTTCTTTGTCGGGGGACAGAGCTAACTGCCGCCGGAAACCGGCTGCTTCCGGGGACTCTGCAAAGCTGGAGCAAAAGCTTGTAAGGATCATCGTCACAGACGCCGACGCCACCGATTCGTCCAGTGAAGATGAATTGATTTTGGGATCAAGAACGGGAGTTAGAAGACAAGTAAGAGAGATCACAATTAATCGTTACTCTGTTCTTGATGGTTCTTCAGCAGAGTCCCCTGTTTCGGAGATTAGCAAGAAGCGGAATCGTAGATCACGTAGGTCCAAATCATCTTGCCGGAAGAAGTTCAGAGGAGTCAGACAGAGGGCTTGGGGCCGTTGGGCGGCGGAAATCCGGGATCCGATTCGCCGAAAGCGGATATGGCTTGGAACCTTTGATACGGCGGAAGAGGCGGCGGCGGTTTACGACCGAGCTGCTTTGGAACTCCAGGGCCCAAACGCCATAACGAACTTCTCCAGTGATGGGGCAGTTACAACGGCGGCCGACGGGGGTAACAAGCAGGAGGACGGCTTAGACTCACCCAAAACGACGGCGGTTTGGTCGCCGGCGTCAGTACTCCATTACGACGGCGTGTTTACTCCGATAGATGAGATGCTTTATTGTGGAGAGATCGATGAGTTCGAATTTGCCATGGCGACGGCTTGCTTGCCGGCGGCGCGGAGGCAGTACGGCGGCGAAGAAGATTTCGGGGAGTTGGAGCTGGACTTGGACTATTTCTTGGTTGACGTCATTTACTAA MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPADSPYSGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEGTARSWTQKDYIISNMSAADMASLSGDRANCRRKPAASGDSAKLEQKLVRIIVTDADATDSSSEDELILGSRTGVRRQVREITINRYSVLDGSSAESPVSEISKKRNRRSRRSKSSCRKKFRGVRQRAWGRWAAEIRDPIRRKRIWLGTFDTAEEAAAVYDRAALELQGPNAITNFSSDGAVTTAADGGNKQEDGLDSPKTTAVWSPASVLHYDGVFTPIDEMLYCGEIDEFEFAMATACLPAARRQYGGEEDFGELELDLDYFLVDVIY Homology
BLAST of Csor.00g103230 vs. ExPASy Swiss-Prot
Match: Q94F47 (Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 6.6e-80 Identity = 140/144 (97.22%), Postives = 143/144 (99.31%), Query Frame = 0
BLAST of Csor.00g103230 vs. ExPASy Swiss-Prot
Match: P35135 (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 1.1e-79 Identity = 141/144 (97.92%), Postives = 142/144 (98.61%), Query Frame = 0
BLAST of Csor.00g103230 vs. ExPASy Swiss-Prot
Match: P35131 (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana OX=3702 GN=UBC8 PE=1 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 1.5e-79 Identity = 140/144 (97.22%), Postives = 143/144 (99.31%), Query Frame = 0
BLAST of Csor.00g103230 vs. ExPASy Swiss-Prot
Match: P35132 (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 1.3e-78 Identity = 138/144 (95.83%), Postives = 142/144 (98.61%), Query Frame = 0
BLAST of Csor.00g103230 vs. ExPASy Swiss-Prot
Match: Q8S919 (Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica OX=39947 GN=UBC5B PE=2 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 2.1e-78 Identity = 137/144 (95.14%), Postives = 142/144 (98.61%), Query Frame = 0
BLAST of Csor.00g103230 vs. NCBI nr
Match: KAG6570614.1 (Ubiquitin-conjugating enzyme E2 28, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 806 bits (2083), Expect = 1.54e-294 Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0
BLAST of Csor.00g103230 vs. NCBI nr
Match: KAG6605368.1 (hypothetical protein SDJN03_02685, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 640 bits (1651), Expect = 3.38e-228 Identity = 335/405 (82.72%), Postives = 352/405 (86.91%), Query Frame = 0
BLAST of Csor.00g103230 vs. NCBI nr
Match: KAG7010464.1 (Ethylene-responsive transcription factor CRF4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 492 bits (1266), Expect = 1.62e-172 Identity = 254/255 (99.61%), Postives = 254/255 (99.61%), Query Frame = 0
BLAST of Csor.00g103230 vs. NCBI nr
Match: XP_022944036.1 (ethylene-responsive transcription factor ERF069-like [Cucurbita moschata]) HSP 1 Score: 489 bits (1260), Expect = 1.32e-171 Identity = 253/255 (99.22%), Postives = 254/255 (99.61%), Query Frame = 0
BLAST of Csor.00g103230 vs. NCBI nr
Match: XP_023512530.1 (ethylene-responsive transcription factor ERF069-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 482 bits (1241), Expect = 1.03e-168 Identity = 250/255 (98.04%), Postives = 250/255 (98.04%), Query Frame = 0
BLAST of Csor.00g103230 vs. ExPASy TrEMBL
Match: A0A6J1FTB9 (ethylene-responsive transcription factor ERF069-like OS=Cucurbita moschata OX=3662 GN=LOC111448583 PE=4 SV=1) HSP 1 Score: 489 bits (1260), Expect = 6.41e-172 Identity = 253/255 (99.22%), Postives = 254/255 (99.61%), Query Frame = 0
BLAST of Csor.00g103230 vs. ExPASy TrEMBL
Match: A0A6J1JHZ1 (ethylene-responsive transcription factor ERF069-like OS=Cucurbita maxima OX=3661 GN=LOC111484520 PE=4 SV=1) HSP 1 Score: 472 bits (1214), Expect = 6.38e-165 Identity = 245/255 (96.08%), Postives = 248/255 (97.25%), Query Frame = 0
BLAST of Csor.00g103230 vs. ExPASy TrEMBL
Match: A0A4S4E318 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_010542 PE=4 SV=1) HSP 1 Score: 446 bits (1146), Expect = 6.08e-152 Identity = 264/438 (60.27%), Postives = 298/438 (68.04%), Query Frame = 0
BLAST of Csor.00g103230 vs. ExPASy TrEMBL
Match: A0A5J5C6J6 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_002138 PE=3 SV=1) HSP 1 Score: 388 bits (997), Expect = 5.75e-131 Identity = 213/320 (66.56%), Postives = 232/320 (72.50%), Query Frame = 0
BLAST of Csor.00g103230 vs. ExPASy TrEMBL
Match: A0A5A7SU74 (Ethylene-responsive transcription factor ERF069-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold104G00790 PE=4 SV=1) HSP 1 Score: 372 bits (954), Expect = 2.03e-125 Identity = 196/256 (76.56%), Postives = 215/256 (83.98%), Query Frame = 0
BLAST of Csor.00g103230 vs. TAIR 10
Match: AT1G64230.1 (ubiquitin-conjugating enzyme 28 ) HSP 1 Score: 299.3 bits (765), Expect = 4.7e-81 Identity = 140/144 (97.22%), Postives = 143/144 (99.31%), Query Frame = 0
BLAST of Csor.00g103230 vs. TAIR 10
Match: AT1G64230.2 (ubiquitin-conjugating enzyme 28 ) HSP 1 Score: 299.3 bits (765), Expect = 4.7e-81 Identity = 140/144 (97.22%), Postives = 143/144 (99.31%), Query Frame = 0
BLAST of Csor.00g103230 vs. TAIR 10
Match: AT5G41700.2 (ubiquitin conjugating enzyme 8 ) HSP 1 Score: 298.1 bits (762), Expect = 1.1e-80 Identity = 140/144 (97.22%), Postives = 143/144 (99.31%), Query Frame = 0
BLAST of Csor.00g103230 vs. TAIR 10
Match: AT5G41700.1 (ubiquitin conjugating enzyme 8 ) HSP 1 Score: 298.1 bits (762), Expect = 1.1e-80 Identity = 140/144 (97.22%), Postives = 143/144 (99.31%), Query Frame = 0
BLAST of Csor.00g103230 vs. TAIR 10
Match: AT5G41700.5 (ubiquitin conjugating enzyme 8 ) HSP 1 Score: 298.1 bits (762), Expect = 1.1e-80 Identity = 140/144 (97.22%), Postives = 143/144 (99.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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