Csor.00g102140 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g102140
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionForkhead box protein G1
LocationCsor_Chr20: 2067687 .. 2068052 (-)
RNA-Seq ExpressionCsor.00g102140
SyntenyCsor.00g102140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCATCTCCATCCTCCACCGCTTCTCTCTGTATCCCCCTCTCTGTCTCACCGCCGCCAAGTGGACGGCGCTACTAACGCTAACAGCCGCCGTGGCCTCCTTTGCTCCGGTGTTTATGTTCACCAATGCGACGTCGCTATCTTCGTCGTTTTCCAAATCATGCGGTCGTGACGGCTACATCAGGATCCCGTTGGACCTTCCCGGCGATGTTCTGTGCGTGCCGGCGAAAATGGTGAATCGGTCCAATTTGGATTTCTTCGTTCCTACTGTCTTTGCGGCACTCGGCGTCGGCGTTTCCGCTTGCTTCGTTAGATCCGTTGGATTGTGGGAGAATTCTCAGGCTTCTCGATTCGATCACAGTTGA

mRNA sequence

ATGGCCATCTCCATCCTCCACCGCTTCTCTCTGTATCCCCCTCTCTGTCTCACCGCCGCCAAGTGGACGGCGCTACTAACGCTAACAGCCGCCGTGGCCTCCTTTGCTCCGGTGTTTATGTTCACCAATGCGACGTCGCTATCTTCGTCGTTTTCCAAATCATGCGGTCGTGACGGCTACATCAGGATCCCGTTGGACCTTCCCGGCGATGTTCTGTGCGTGCCGGCGAAAATGGTGAATCGGTCCAATTTGGATTTCTTCGTTCCTACTGTCTTTGCGGCACTCGGCGTCGGCGTTTCCGCTTGCTTCGTTAGATCCGTTGGATTGTGGGAGAATTCTCAGGCTTCTCGATTCGATCACAGTTGA

Coding sequence (CDS)

ATGGCCATCTCCATCCTCCACCGCTTCTCTCTGTATCCCCCTCTCTGTCTCACCGCCGCCAAGTGGACGGCGCTACTAACGCTAACAGCCGCCGTGGCCTCCTTTGCTCCGGTGTTTATGTTCACCAATGCGACGTCGCTATCTTCGTCGTTTTCCAAATCATGCGGTCGTGACGGCTACATCAGGATCCCGTTGGACCTTCCCGGCGATGTTCTGTGCGTGCCGGCGAAAATGGTGAATCGGTCCAATTTGGATTTCTTCGTTCCTACTGTCTTTGCGGCACTCGGCGTCGGCGTTTCCGCTTGCTTCGTTAGATCCGTTGGATTGTGGGAGAATTCTCAGGCTTCTCGATTCGATCACAGTTGA

Protein sequence

MAISILHRFSLYPPLCLTAAKWTALLTLTAAVASFAPVFMFTNATSLSSSFSKSCGRDGYIRIPLDLPGDVLCVPAKMVNRSNLDFFVPTVFAALGVGVSACFVRSVGLWENSQASRFDHS
Homology
BLAST of Csor.00g102140 vs. NCBI nr
Match: KAG6570723.1 (hypothetical protein SDJN03_29638, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 242 bits (618), Expect = 1.12e-80
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0

Query: 1   MAISILHRFSLYPPLCLTAAKWTALLTLTAAVASFAPVFMFTNATSLSSSFSKSCGRDGY 60
           MAISILHRFSLYPPLCLTAAKWTALLTLTAAVASFAPVFMFTNATSLSSSFSKSCGRDGY
Sbjct: 1   MAISILHRFSLYPPLCLTAAKWTALLTLTAAVASFAPVFMFTNATSLSSSFSKSCGRDGY 60

Query: 61  IRIPLDLPGDVLCVPAKMVNRSNLDFFVPTVFAALGVGVSACFVRSVGLWENSQASRFDH 120
           IRIPLDLPGDVLCVPAKMVNRSNLDFFVPTVFAALGVGVSACFVRSVGLWENSQASRFDH
Sbjct: 61  IRIPLDLPGDVLCVPAKMVNRSNLDFFVPTVFAALGVGVSACFVRSVGLWENSQASRFDH 120

BLAST of Csor.00g102140 vs. NCBI nr
Match: XP_022148378.1 (uncharacterized protein LOC111017044 [Momordica charantia])

HSP 1 Score: 201 bits (512), Expect = 2.27e-64
Identity = 105/121 (86.78%), Postives = 110/121 (90.91%), Query Frame = 0

Query: 1   MAISILHRFSLYPPLCLTAAKWTALLTLTAAVASFAPVFMFTNATSLSSSFSKSCGRDGY 60
           MAIS L RFSLYPP CLTAAKWTALLTLTAAVASFAP F+FTNATSLSSSFSKSC RDGY
Sbjct: 12  MAISFL-RFSLYPPHCLTAAKWTALLTLTAAVASFAPEFIFTNATSLSSSFSKSCRRDGY 71

Query: 61  IRIPLDLPGDVLCVPAKMVNRSNLDFFVPTVFAALGVGVSACFVRSVGLWENSQASRFDH 120
           IRIPLDLPGDVLC+PAKMV RS+LDFFVPTVFAALGVGVS CFVRS GL EN++ SRFD 
Sbjct: 72  IRIPLDLPGDVLCLPAKMVTRSSLDFFVPTVFAALGVGVSVCFVRSFGLLENAENSRFDR 131

BLAST of Csor.00g102140 vs. NCBI nr
Match: XP_008448381.1 (PREDICTED: uncharacterized protein LOC103490587 [Cucumis melo] >KAA0061944.1 forkhead box protein G1 [Cucumis melo var. makuwa] >TYK23985.1 forkhead box protein G1 [Cucumis melo var. makuwa])

HSP 1 Score: 192 bits (487), Expect = 8.21e-61
Identity = 96/111 (86.49%), Postives = 101/111 (90.99%), Query Frame = 0

Query: 1   MAISILHRFSLYPPLCLTAAKWTALLTLTAAVASFAPVFMFTNATSLSSSFSKSCGRDGY 60
           M IS LHRFSL PP C TAAKWTALLTLTAAVASFAP F+F NATSL SSFS+SC RDGY
Sbjct: 1   MPISFLHRFSLDPPHCRTAAKWTALLTLTAAVASFAPEFIFANATSLHSSFSRSCRRDGY 60

Query: 61  IRIPLDLPGDVLCVPAKMVNRSNLDFFVPTVFAALGVGVSACFVRSVGLWE 111
           IRIPLDLPGDVLC+PA MVNRS+LDFFVPTVFAALGVGVSACFVRS+GLWE
Sbjct: 61  IRIPLDLPGDVLCLPANMVNRSSLDFFVPTVFAALGVGVSACFVRSLGLWE 111

BLAST of Csor.00g102140 vs. NCBI nr
Match: XP_038900397.1 (uncharacterized protein LOC120087630 [Benincasa hispida])

HSP 1 Score: 191 bits (484), Expect = 2.35e-60
Identity = 96/111 (86.49%), Postives = 101/111 (90.99%), Query Frame = 0

Query: 1   MAISILHRFSLYPPLCLTAAKWTALLTLTAAVASFAPVFMFTNATSLSSSFSKSCGRDGY 60
           M IS LHRFSL PP C +AAKWTALL LTAAVASFAP F+FTNATS  SSFSKSC RDGY
Sbjct: 1   MPISFLHRFSLDPPHCRSAAKWTALLALTAAVASFAPEFIFTNATSPHSSFSKSCRRDGY 60

Query: 61  IRIPLDLPGDVLCVPAKMVNRSNLDFFVPTVFAALGVGVSACFVRSVGLWE 111
           IRIPLDLPGDVLC+PAKMVNRS+LDFFVPTVFAALGVGVSACFVRS+GLWE
Sbjct: 61  IRIPLDLPGDVLCLPAKMVNRSSLDFFVPTVFAALGVGVSACFVRSLGLWE 111

BLAST of Csor.00g102140 vs. NCBI nr
Match: XP_031742493.1 (uncharacterized protein LOC105435838 [Cucumis sativus])

HSP 1 Score: 181 bits (460), Expect = 9.45e-57
Identity = 92/109 (84.40%), Postives = 98/109 (89.91%), Query Frame = 0

Query: 1   MAISILHRFSLYPPLCLTAAKWTALLTLTAAVASFAPVFMFTNATSLSSSFSKSCGRDGY 60
           MAIS LHRFSL P  C +AAKWTALLTLTAAV SFAP F+FTNATSL SSFS+SCGRDGY
Sbjct: 1   MAISFLHRFSLDPQHCRSAAKWTALLTLTAAVTSFAPEFIFTNATSLHSSFSRSCGRDGY 60

Query: 61  IRIPLDLPGDVLCVPAKMVNRSNLDFFVPTVFAALGVGVSACFVRSVGL 109
           IRIPLDLPGDVLC+PA MVN S+ DFFVPTVFAALGVGVSACFVRS+GL
Sbjct: 61  IRIPLDLPGDVLCLPANMVNWSSFDFFVPTVFAALGVGVSACFVRSLGL 109

BLAST of Csor.00g102140 vs. ExPASy TrEMBL
Match: A0A6J1D3X8 (uncharacterized protein LOC111017044 OS=Momordica charantia OX=3673 GN=LOC111017044 PE=4 SV=1)

HSP 1 Score: 201 bits (512), Expect = 1.10e-64
Identity = 105/121 (86.78%), Postives = 110/121 (90.91%), Query Frame = 0

Query: 1   MAISILHRFSLYPPLCLTAAKWTALLTLTAAVASFAPVFMFTNATSLSSSFSKSCGRDGY 60
           MAIS L RFSLYPP CLTAAKWTALLTLTAAVASFAP F+FTNATSLSSSFSKSC RDGY
Sbjct: 12  MAISFL-RFSLYPPHCLTAAKWTALLTLTAAVASFAPEFIFTNATSLSSSFSKSCRRDGY 71

Query: 61  IRIPLDLPGDVLCVPAKMVNRSNLDFFVPTVFAALGVGVSACFVRSVGLWENSQASRFDH 120
           IRIPLDLPGDVLC+PAKMV RS+LDFFVPTVFAALGVGVS CFVRS GL EN++ SRFD 
Sbjct: 72  IRIPLDLPGDVLCLPAKMVTRSSLDFFVPTVFAALGVGVSVCFVRSFGLLENAENSRFDR 131

BLAST of Csor.00g102140 vs. ExPASy TrEMBL
Match: A0A5A7V3R2 (Forkhead box protein G1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00490 PE=4 SV=1)

HSP 1 Score: 192 bits (487), Expect = 3.98e-61
Identity = 96/111 (86.49%), Postives = 101/111 (90.99%), Query Frame = 0

Query: 1   MAISILHRFSLYPPLCLTAAKWTALLTLTAAVASFAPVFMFTNATSLSSSFSKSCGRDGY 60
           M IS LHRFSL PP C TAAKWTALLTLTAAVASFAP F+F NATSL SSFS+SC RDGY
Sbjct: 1   MPISFLHRFSLDPPHCRTAAKWTALLTLTAAVASFAPEFIFANATSLHSSFSRSCRRDGY 60

Query: 61  IRIPLDLPGDVLCVPAKMVNRSNLDFFVPTVFAALGVGVSACFVRSVGLWE 111
           IRIPLDLPGDVLC+PA MVNRS+LDFFVPTVFAALGVGVSACFVRS+GLWE
Sbjct: 61  IRIPLDLPGDVLCLPANMVNRSSLDFFVPTVFAALGVGVSACFVRSLGLWE 111

BLAST of Csor.00g102140 vs. ExPASy TrEMBL
Match: A0A1S3BKF6 (uncharacterized protein LOC103490587 OS=Cucumis melo OX=3656 GN=LOC103490587 PE=4 SV=1)

HSP 1 Score: 192 bits (487), Expect = 3.98e-61
Identity = 96/111 (86.49%), Postives = 101/111 (90.99%), Query Frame = 0

Query: 1   MAISILHRFSLYPPLCLTAAKWTALLTLTAAVASFAPVFMFTNATSLSSSFSKSCGRDGY 60
           M IS LHRFSL PP C TAAKWTALLTLTAAVASFAP F+F NATSL SSFS+SC RDGY
Sbjct: 1   MPISFLHRFSLDPPHCRTAAKWTALLTLTAAVASFAPEFIFANATSLHSSFSRSCRRDGY 60

Query: 61  IRIPLDLPGDVLCVPAKMVNRSNLDFFVPTVFAALGVGVSACFVRSVGLWE 111
           IRIPLDLPGDVLC+PA MVNRS+LDFFVPTVFAALGVGVSACFVRS+GLWE
Sbjct: 61  IRIPLDLPGDVLCLPANMVNRSSLDFFVPTVFAALGVGVSACFVRSLGLWE 111

BLAST of Csor.00g102140 vs. ExPASy TrEMBL
Match: A0A0A0KEV4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G303790 PE=4 SV=1)

HSP 1 Score: 181 bits (460), Expect = 4.57e-57
Identity = 92/109 (84.40%), Postives = 98/109 (89.91%), Query Frame = 0

Query: 1   MAISILHRFSLYPPLCLTAAKWTALLTLTAAVASFAPVFMFTNATSLSSSFSKSCGRDGY 60
           MAIS LHRFSL P  C +AAKWTALLTLTAAV SFAP F+FTNATSL SSFS+SCGRDGY
Sbjct: 1   MAISFLHRFSLDPQHCRSAAKWTALLTLTAAVTSFAPEFIFTNATSLHSSFSRSCGRDGY 60

Query: 61  IRIPLDLPGDVLCVPAKMVNRSNLDFFVPTVFAALGVGVSACFVRSVGL 109
           IRIPLDLPGDVLC+PA MVN S+ DFFVPTVFAALGVGVSACFVRS+GL
Sbjct: 61  IRIPLDLPGDVLCLPANMVNWSSFDFFVPTVFAALGVGVSACFVRSLGL 109

BLAST of Csor.00g102140 vs. ExPASy TrEMBL
Match: A0A2I4EV00 (uncharacterized protein LOC108992958 OS=Juglans regia OX=51240 GN=LOC108992958 PE=4 SV=1)

HSP 1 Score: 133 bits (335), Expect = 6.20e-38
Identity = 68/109 (62.39%), Postives = 81/109 (74.31%), Query Frame = 0

Query: 4   SILHRFSLYPPLCLTAAKWTALLTLTAAVASFAPVFMFTNATSLSSSFSKSCGRDGYIRI 63
           ++ H+ +   PL L AA WT LLTLT AVASFAP   F +A S SSSFSKSC  DG++RI
Sbjct: 8   TLFHQVTSRWPLLLCAATWTVLLTLTVAVASFAPEIAFVSAISPSSSFSKSCHADGFVRI 67

Query: 64  PLDLPGDVLCVPAKMVNRSNLDFFVPTVFAALGVGVSACFVRSVGLWEN 112
           PLD P +V+C PA +V RS LDFF+PTVFAAL V  SAC VRS+GLWE+
Sbjct: 68  PLDNPMEVMCFPAHLVRRSKLDFFLPTVFAALVVACSACMVRSLGLWES 116

BLAST of Csor.00g102140 vs. TAIR 10
Match: AT2G37530.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G07795.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 102.8 bits (255), Expect = 1.9e-22
Identity = 57/117 (48.72%), Postives = 73/117 (62.39%), Query Frame = 0

Query: 1   MAISILHRFSLYPPLCLTAAKWTALLTLTAAVASFAPVFMFTNATSLSSS--FSKSCGRD 60
           M  S+ HRF+   P  +  A WT  LTLT A+ S AP F F +A   SSS  FS+ CG  
Sbjct: 5   MFSSLTHRFAWRIPHFVYGATWTLFLTLTVAIISLAPEFAFVSAIFPSSSEVFSRRCGSY 64

Query: 61  GYIRIPLDLPGDVLCVPAKMVNRSNLDFFVPTVFAALGVGVSACFVRSVGLWENSQA 116
             I +PLDLP +VLC+PA +  RS +D  VP VFAA+ V +SA  VR++GLWE  +A
Sbjct: 65  AAILVPLDLPSEVLCLPANLFRRSKMDLVVPPVFAAIVVALSAVVVRTMGLWEADEA 121

BLAST of Csor.00g102140 vs. TAIR 10
Match: AT1G07795.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G28725.1); Has 38 Blast hits to 38 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 89.0 bits (219), Expect = 2.9e-18
Identity = 47/94 (50.00%), Postives = 60/94 (63.83%), Query Frame = 0

Query: 14  PLCLTAAKWTALLTLTAAVASFAPVFMFTNATSLSSSFSKSC-GRDGYIRIPLDLPGDVL 73
           P+   AA WT LL  T AVASFAP   F       S+ S SC G DG+++IP+D  G+ +
Sbjct: 21  PVIAQAATWTVLLMFTVAVASFAPEMAFV------STVSSSCGGGDGFVKIPMDFAGESI 80

Query: 74  CVPAKMVNRSNLDFFVPTVFAALGVGVSACFVRS 107
           CVP+ MV RS  D FVP++FAA+ V  SAC +RS
Sbjct: 81  CVPSNMVKRSRFDLFVPSIFAAVMVTASACLIRS 108

BLAST of Csor.00g102140 vs. TAIR 10
Match: AT2G28725.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G07795.1); Has 35 Blast hits to 35 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 75.1 bits (183), Expect = 4.3e-14
Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = 0

Query: 5   ILHRFSLYPPLCLTAAKWTALLTLTAAVASFAPVFMFTNATSLSSSFSKSCGRDGYIRIP 64
           IL + S    + +  A WT LL +T A+ASFAP   F +    SS        DG++RIP
Sbjct: 4   ILEKTSTRWEVLVQTATWTILLMITVALASFAPEMAFVSKLKSSS--------DGFVRIP 63

Query: 65  LDLPGDVLCVPAKMVNRSNLDFFVPTVFAALGVGVSACFVRS 107
           +DLPG++L +P++MV  S LD F+PT+FA + V  S   +RS
Sbjct: 64  MDLPGEMLILPSEMVKNSYLDVFLPTIFAGVMVIASVSLLRS 97

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6570723.11.12e-80100.00hypothetical protein SDJN03_29638, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022148378.12.27e-6486.78uncharacterized protein LOC111017044 [Momordica charantia][more]
XP_008448381.18.21e-6186.49PREDICTED: uncharacterized protein LOC103490587 [Cucumis melo] >KAA0061944.1 for... [more]
XP_038900397.12.35e-6086.49uncharacterized protein LOC120087630 [Benincasa hispida][more]
XP_031742493.19.45e-5784.40uncharacterized protein LOC105435838 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A6J1D3X81.10e-6486.78uncharacterized protein LOC111017044 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A5A7V3R23.98e-6186.49Forkhead box protein G1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BKF63.98e-6186.49uncharacterized protein LOC103490587 OS=Cucumis melo OX=3656 GN=LOC103490587 PE=... [more]
A0A0A0KEV44.57e-5784.40Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G303790 PE=4 SV=1[more]
A0A2I4EV006.20e-3862.39uncharacterized protein LOC108992958 OS=Juglans regia OX=51240 GN=LOC108992958 P... [more]
Match NameE-valueIdentityDescription
AT2G37530.11.9e-2248.72unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G07795.12.9e-1850.00unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G28725.14.3e-1442.16unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34658OS01G0151800 PROTEINcoord: 2..114
NoneNo IPR availablePANTHERPTHR34658:SF5BNACNNG38900D PROTEINcoord: 2..114

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g102140.m01Csor.00g102140.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane