Csor.00g102140 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCATCTCCATCCTCCACCGCTTCTCTCTGTATCCCCCTCTCTGTCTCACCGCCGCCAAGTGGACGGCGCTACTAACGCTAACAGCCGCCGTGGCCTCCTTTGCTCCGGTGTTTATGTTCACCAATGCGACGTCGCTATCTTCGTCGTTTTCCAAATCATGCGGTCGTGACGGCTACATCAGGATCCCGTTGGACCTTCCCGGCGATGTTCTGTGCGTGCCGGCGAAAATGGTGAATCGGTCCAATTTGGATTTCTTCGTTCCTACTGTCTTTGCGGCACTCGGCGTCGGCGTTTCCGCTTGCTTCGTTAGATCCGTTGGATTGTGGGAGAATTCTCAGGCTTCTCGATTCGATCACAGTTGA ATGGCCATCTCCATCCTCCACCGCTTCTCTCTGTATCCCCCTCTCTGTCTCACCGCCGCCAAGTGGACGGCGCTACTAACGCTAACAGCCGCCGTGGCCTCCTTTGCTCCGGTGTTTATGTTCACCAATGCGACGTCGCTATCTTCGTCGTTTTCCAAATCATGCGGTCGTGACGGCTACATCAGGATCCCGTTGGACCTTCCCGGCGATGTTCTGTGCGTGCCGGCGAAAATGGTGAATCGGTCCAATTTGGATTTCTTCGTTCCTACTGTCTTTGCGGCACTCGGCGTCGGCGTTTCCGCTTGCTTCGTTAGATCCGTTGGATTGTGGGAGAATTCTCAGGCTTCTCGATTCGATCACAGTTGA ATGGCCATCTCCATCCTCCACCGCTTCTCTCTGTATCCCCCTCTCTGTCTCACCGCCGCCAAGTGGACGGCGCTACTAACGCTAACAGCCGCCGTGGCCTCCTTTGCTCCGGTGTTTATGTTCACCAATGCGACGTCGCTATCTTCGTCGTTTTCCAAATCATGCGGTCGTGACGGCTACATCAGGATCCCGTTGGACCTTCCCGGCGATGTTCTGTGCGTGCCGGCGAAAATGGTGAATCGGTCCAATTTGGATTTCTTCGTTCCTACTGTCTTTGCGGCACTCGGCGTCGGCGTTTCCGCTTGCTTCGTTAGATCCGTTGGATTGTGGGAGAATTCTCAGGCTTCTCGATTCGATCACAGTTGA MAISILHRFSLYPPLCLTAAKWTALLTLTAAVASFAPVFMFTNATSLSSSFSKSCGRDGYIRIPLDLPGDVLCVPAKMVNRSNLDFFVPTVFAALGVGVSACFVRSVGLWENSQASRFDHS Homology
BLAST of Csor.00g102140 vs. NCBI nr
Match: KAG6570723.1 (hypothetical protein SDJN03_29638, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 242 bits (618), Expect = 1.12e-80 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of Csor.00g102140 vs. NCBI nr
Match: XP_022148378.1 (uncharacterized protein LOC111017044 [Momordica charantia]) HSP 1 Score: 201 bits (512), Expect = 2.27e-64 Identity = 105/121 (86.78%), Postives = 110/121 (90.91%), Query Frame = 0
BLAST of Csor.00g102140 vs. NCBI nr
Match: XP_008448381.1 (PREDICTED: uncharacterized protein LOC103490587 [Cucumis melo] >KAA0061944.1 forkhead box protein G1 [Cucumis melo var. makuwa] >TYK23985.1 forkhead box protein G1 [Cucumis melo var. makuwa]) HSP 1 Score: 192 bits (487), Expect = 8.21e-61 Identity = 96/111 (86.49%), Postives = 101/111 (90.99%), Query Frame = 0
BLAST of Csor.00g102140 vs. NCBI nr
Match: XP_038900397.1 (uncharacterized protein LOC120087630 [Benincasa hispida]) HSP 1 Score: 191 bits (484), Expect = 2.35e-60 Identity = 96/111 (86.49%), Postives = 101/111 (90.99%), Query Frame = 0
BLAST of Csor.00g102140 vs. NCBI nr
Match: XP_031742493.1 (uncharacterized protein LOC105435838 [Cucumis sativus]) HSP 1 Score: 181 bits (460), Expect = 9.45e-57 Identity = 92/109 (84.40%), Postives = 98/109 (89.91%), Query Frame = 0
BLAST of Csor.00g102140 vs. ExPASy TrEMBL
Match: A0A6J1D3X8 (uncharacterized protein LOC111017044 OS=Momordica charantia OX=3673 GN=LOC111017044 PE=4 SV=1) HSP 1 Score: 201 bits (512), Expect = 1.10e-64 Identity = 105/121 (86.78%), Postives = 110/121 (90.91%), Query Frame = 0
BLAST of Csor.00g102140 vs. ExPASy TrEMBL
Match: A0A5A7V3R2 (Forkhead box protein G1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00490 PE=4 SV=1) HSP 1 Score: 192 bits (487), Expect = 3.98e-61 Identity = 96/111 (86.49%), Postives = 101/111 (90.99%), Query Frame = 0
BLAST of Csor.00g102140 vs. ExPASy TrEMBL
Match: A0A1S3BKF6 (uncharacterized protein LOC103490587 OS=Cucumis melo OX=3656 GN=LOC103490587 PE=4 SV=1) HSP 1 Score: 192 bits (487), Expect = 3.98e-61 Identity = 96/111 (86.49%), Postives = 101/111 (90.99%), Query Frame = 0
BLAST of Csor.00g102140 vs. ExPASy TrEMBL
Match: A0A0A0KEV4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G303790 PE=4 SV=1) HSP 1 Score: 181 bits (460), Expect = 4.57e-57 Identity = 92/109 (84.40%), Postives = 98/109 (89.91%), Query Frame = 0
BLAST of Csor.00g102140 vs. ExPASy TrEMBL
Match: A0A2I4EV00 (uncharacterized protein LOC108992958 OS=Juglans regia OX=51240 GN=LOC108992958 PE=4 SV=1) HSP 1 Score: 133 bits (335), Expect = 6.20e-38 Identity = 68/109 (62.39%), Postives = 81/109 (74.31%), Query Frame = 0
BLAST of Csor.00g102140 vs. TAIR 10
Match: AT2G37530.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G07795.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 102.8 bits (255), Expect = 1.9e-22 Identity = 57/117 (48.72%), Postives = 73/117 (62.39%), Query Frame = 0
BLAST of Csor.00g102140 vs. TAIR 10
Match: AT1G07795.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G28725.1); Has 38 Blast hits to 38 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 89.0 bits (219), Expect = 2.9e-18 Identity = 47/94 (50.00%), Postives = 60/94 (63.83%), Query Frame = 0
BLAST of Csor.00g102140 vs. TAIR 10
Match: AT2G28725.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G07795.1); Has 35 Blast hits to 35 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 75.1 bits (183), Expect = 4.3e-14 Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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