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Csor.00g101640 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGATGGAGACGGCTGTGGGGGCGATTCTCGGCAGGCTAGGGCGCCACTGCTATGCGGTTTTGTGTTTAGGAGTGCTTCTTCTGACGGTTGCCGTCGTTCACTACGTCGGCGATGGAGAACCGACCGATCCTCGCGAGCGAAGCAAGCGCCGTCTTCGCACCTTGCATGGCGGCCGTGATCCGCCTCCGGTTTTCAATCGCGGTGTGTCGTAAACTGGAGCGCCCAGCGGTTAGGGCTGAATCCGATGCATTCGCTGCTTTTGTGATGATTTTGTAAAAGATTAATAAATAGTTGTAAATTACTTGCTTTCTTTCTTTCTAGATCTAAGCTTTTAGTAACATTATTATATATTTTATTTCGGTTATGTGAATTTACGAAAATAGCCCCGATGTAAGGGAAGCCATTTGGGGGTCTTCTCTGTTTGTCTCTCATTTTCCCCCCAAATCCACCTGATTCCGATCTTCCTCTCCGATTCTCAATCCCAATCCGCATCCTCCTCCACCTCCAGACGTGGCGTCGTCGCTCCTCGCGGCTCTGCGGCCGCGACGGCTGGCCTTCGACGTCGCCGTCTCGGCTCCACTTCTGCTGCCGGCTCTACTGGACTCGTTGGCGGTGGATCAAGCGGCGGCGGCGGCGGCAACAACATGTTGAGGTTCTACACCGATGTTGCTCCAGGCTTGAAGATTTCTCCCACCGTCGTCCTCGTTTTGAGCATCTGCTTCATCGATTTCATCACCGTCCTCCACGTCTTTGGTAAGCTCTACCGCGCGAGATCCGCGGCTGGAGTTTAA ATGGAGATGGAGACGGCTGTGGGGGCGATTCTCGGCAGGCTAGGGCGCCACTGCTATGCGGTTTTGTGTTTAGGAGTGCTTCTTCTGACGGTTGCCGTCGTTCACTACGTCGGCGATGGAGAACCGACCGATCCTCGCGAGCGAAGCAAGCGCCGTCTTCGCACCTTGCATGGCGGCCGTGATCCGCCTCCGCCCCGATGTAAGGGAAGCCATTTGGGGGTCTTCTCTGTTTGTCTCTCATTTTCCCCCCAAATCCACCTGATTCCGATCTTCCTCTCCGATTCTCAATCCCAATCCGCATCCTCCTCCACCTCCAGACGTGGCGTCGTCGCTCCTCGCGGCTCTGCGGCCGCGACGGCTGGCCTTCGACGTCGCCGTCTCGGCTCCACTTCTGCTGCCGGCTCTACTGGACTCGTTGGCGGTGGATCAAGCGGCGGCGGCGGCGGCAACAACATGTTGAGGTTCTACACCGATGTTGCTCCAGGCTTGAAGATTTCTCCCACCGTCGTCCTCGTTTTGAGCATCTGCTTCATCGATTTCATCACCGTCCTCCACGTCTTTGGTAAGCTCTACCGCGCGAGATCCGCGGCTGGAGTTTAA ATGGAGATGGAGACGGCTGTGGGGGCGATTCTCGGCAGGCTAGGGCGCCACTGCTATGCGGTTTTGTGTTTAGGAGTGCTTCTTCTGACGGTTGCCGTCGTTCACTACGTCGGCGATGGAGAACCGACCGATCCTCGCGAGCGAAGCAAGCGCCGTCTTCGCACCTTGCATGGCGGCCGTGATCCGCCTCCGCCCCGATGTAAGGGAAGCCATTTGGGGGTCTTCTCTGTTTGTCTCTCATTTTCCCCCCAAATCCACCTGATTCCGATCTTCCTCTCCGATTCTCAATCCCAATCCGCATCCTCCTCCACCTCCAGACGTGGCGTCGTCGCTCCTCGCGGCTCTGCGGCCGCGACGGCTGGCCTTCGACGTCGCCGTCTCGGCTCCACTTCTGCTGCCGGCTCTACTGGACTCGTTGGCGGTGGATCAAGCGGCGGCGGCGGCGGCAACAACATGTTGAGGTTCTACACCGATGTTGCTCCAGGCTTGAAGATTTCTCCCACCGTCGTCCTCGTTTTGAGCATCTGCTTCATCGATTTCATCACCGTCCTCCACGTCTTTGGTAAGCTCTACCGCGCGAGATCCGCGGCTGGAGTTTAA MEMETAVGAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERSKRRLRTLHGGRDPPPPRCKGSHLGVFSVCLSFSPQIHLIPIFLSDSQSQSASSSTSRRGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVGGGSSGGGGGNNMLRFYTDVAPGLKISPTVVLVLSICFIDFITVLHVFGKLYRARSAAGV Homology
BLAST of Csor.00g101640 vs. ExPASy Swiss-Prot
Match: P38389 (Protein transport protein Sec61 subunit beta OS=Arabidopsis thaliana OX=3702 GN=At2g45070 PE=1 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 5.3e-14 Identity = 52/79 (65.82%), Postives = 60/79 (75.95%), Query Frame = 0
BLAST of Csor.00g101640 vs. ExPASy Swiss-Prot
Match: Q54YR4 (Protein transport protein Sec61 subunit beta OS=Dictyostelium discoideum OX=44689 GN=sec61b PE=3 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.8e-06 Identity = 23/46 (50.00%), Postives = 35/46 (76.09%), Query Frame = 0
BLAST of Csor.00g101640 vs. ExPASy Swiss-Prot
Match: A8I6P9 (Protein transport protein Sec61 subunit beta OS=Chlamydomonas reinhardtii OX=3055 GN=SEC61B PE=1 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 1.0e-04 Identity = 36/98 (36.73%), Postives = 52/98 (53.06%), Query Frame = 0
BLAST of Csor.00g101640 vs. NCBI nr
Match: KAG6570773.1 (Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 379 bits (974), Expect = 2.05e-132 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0
BLAST of Csor.00g101640 vs. NCBI nr
Match: KAG7010620.1 (Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 283 bits (724), Expect = 7.62e-95 Identity = 160/199 (80.40%), Postives = 162/199 (81.41%), Query Frame = 0
BLAST of Csor.00g101640 vs. NCBI nr
Match: XP_022958107.1 (protein transport protein Sec61 subunit beta [Cucurbita moschata] >XP_022995532.1 protein transport protein Sec61 subunit beta [Cucurbita maxima] >XP_023534505.1 protein transport protein Sec61 subunit beta [Cucurbita pepo subsp. pepo] >KAG7013903.1 Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 158 bits (399), Expect = 3.19e-46 Identity = 92/105 (87.62%), Postives = 96/105 (91.43%), Query Frame = 0
BLAST of Csor.00g101640 vs. NCBI nr
Match: XP_038902812.1 (protein transport protein Sec61 subunit beta [Benincasa hispida]) HSP 1 Score: 157 bits (396), Expect = 9.09e-46 Identity = 92/105 (87.62%), Postives = 95/105 (90.48%), Query Frame = 0
BLAST of Csor.00g101640 vs. NCBI nr
Match: XP_004149541.1 (protein transport protein Sec61 subunit beta [Cucumis sativus] >KGN47316.1 hypothetical protein Csa_023023 [Cucumis sativus]) HSP 1 Score: 151 bits (382), Expect = 1.28e-43 Identity = 88/107 (82.24%), Postives = 95/107 (88.79%), Query Frame = 0
BLAST of Csor.00g101640 vs. ExPASy TrEMBL
Match: A0A6J1JZ65 (Protein transport protein Sec61 subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111491039 PE=3 SV=1) HSP 1 Score: 158 bits (399), Expect = 1.54e-46 Identity = 92/105 (87.62%), Postives = 96/105 (91.43%), Query Frame = 0
BLAST of Csor.00g101640 vs. ExPASy TrEMBL
Match: A0A6J1H102 (Protein transport protein Sec61 subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111459432 PE=3 SV=1) HSP 1 Score: 158 bits (399), Expect = 1.54e-46 Identity = 92/105 (87.62%), Postives = 96/105 (91.43%), Query Frame = 0
BLAST of Csor.00g101640 vs. ExPASy TrEMBL
Match: A0A0A0KHR1 (Protein transport protein Sec61 subunit beta OS=Cucumis sativus OX=3659 GN=Csa_6G293930 PE=3 SV=1) HSP 1 Score: 151 bits (382), Expect = 6.22e-44 Identity = 88/107 (82.24%), Postives = 95/107 (88.79%), Query Frame = 0
BLAST of Csor.00g101640 vs. ExPASy TrEMBL
Match: A0A5D3CTD4 (Protein transport protein Sec61 subunit beta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00270 PE=3 SV=1) HSP 1 Score: 151 bits (381), Expect = 8.82e-44 Identity = 88/107 (82.24%), Postives = 94/107 (87.85%), Query Frame = 0
BLAST of Csor.00g101640 vs. ExPASy TrEMBL
Match: A0A1S3CKE5 (Protein transport protein Sec61 subunit beta OS=Cucumis melo OX=3656 GN=LOC103501938 PE=3 SV=1) HSP 1 Score: 151 bits (381), Expect = 8.82e-44 Identity = 88/107 (82.24%), Postives = 94/107 (87.85%), Query Frame = 0
BLAST of Csor.00g101640 vs. TAIR 10
Match: AT5G60460.1 (Preprotein translocase Sec, Sec61-beta subunit protein ) HSP 1 Score: 116.3 bits (290), Expect = 2.8e-26 Identity = 67/102 (65.69%), Postives = 77/102 (75.49%), Query Frame = 0
BLAST of Csor.00g101640 vs. TAIR 10
Match: AT3G60540.1 (Preprotein translocase Sec, Sec61-beta subunit protein ) HSP 1 Score: 81.6 bits (200), Expect = 7.6e-16 Identity = 50/88 (56.82%), Postives = 57/88 (64.77%), Query Frame = 0
BLAST of Csor.00g101640 vs. TAIR 10
Match: AT3G60540.2 (Preprotein translocase Sec, Sec61-beta subunit protein ) HSP 1 Score: 81.6 bits (200), Expect = 7.6e-16 Identity = 50/88 (56.82%), Postives = 57/88 (64.77%), Query Frame = 0
BLAST of Csor.00g101640 vs. TAIR 10
Match: AT2G45070.1 (Preprotein translocase Sec, Sec61-beta subunit protein ) HSP 1 Score: 79.3 bits (194), Expect = 3.8e-15 Identity = 52/79 (65.82%), Postives = 60/79 (75.95%), Query Frame = 0
BLAST of Csor.00g101640 vs. TAIR 10
Match: AT2G45070.2 (Preprotein translocase Sec, Sec61-beta subunit protein ) HSP 1 Score: 79.3 bits (194), Expect = 3.8e-15 Identity = 52/79 (65.82%), Postives = 60/79 (75.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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