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Csor.00g101630 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAGAAACAATACTCCAACAATTTCTATCTCCACGTTTCTGCTTCATTCTTCCTCCTGCCCTTGTTCTTCATCTCCCTCGCCTATGCCAAGATCACCGTAATCGATCTCATCTTCCGAGTAGATTCCGTTTGCCAGAGATACGAGAAGTATGATGTTCAGAAACAGCGCGAGCTCAATGCTTATGGTGATGGTGTCTTTTCTCGCCTCTTCGCTGCCGTTGAACTCGAAATCCATGCCGCTCTTCAGGTTTTCCCGCTCATTGTCTTGTTGTTGTTCTTCAATAACTTATCCAATTTAATTTTAAAAATCTGAAGTCGCCTCAACTGAGAAGATTAGGGCTGCTGCAGTTGCGATGAATGCCGAGGTTCGACGGAAGAAGGCCCGATTGATGGATGAAGTGCCGAAACTTTGTAAATTGGCTCTCAAGAAGGTGAAAATTTCTGTTTTCTTGTTTAATTGAAGATGGTGAGATAGAATTTGAAGTTAGGGCTTTCTCTGTTCTGGTTTCTTTTCTTGAGAGCGAGTATTTCCAGCACAGTGAAGGATGGGCGTCCTCCGCCTCATCTAACAATATCAAATTTGATTTATCAGGTTTTACGCACTTGAGATGGAAATTTTGAGAGCGAGTATTTCCAGCACAGTGCAGAATCAAGTCAATTTCGAAACGAGTATGACATGCGGAAGATGAAACGGGCCTGTGAGTTTCTTTACCATTTTTATGCCATGGAAATTAGTTCTAAGCTCATTTTAGACTGCATTACTGAACTCAAACTATTAAAGATAAATCGAATGACATTATACAAGTGAGTTGGAGCAAAAATAATCCTTTTAATGTAATTCCAATCTCATGGCTTATCAGTTTTGTTACGACAATGAGGTTGGGCTTCGAATGATCTGTGTGACCATTTTTGCAGGACCAAGGTCTTGATATCATATCTGAAGGGTTGGATGTGCTTAAAAATCTGGCCCATGATATGAACGAGATGAGTGTTGAAGTATTTATATAATCAAATTTACCTTTAACTCATTAGCTTAAGCAAACTTTTAAGTAGTGAAATGAAAAGATATACAAATGAGATGCTTAATTACCCTGTTTGGTTCTTGTAATTGATTTTATCCTTGTCCAGGAATTGAACAGCCAAGTTCCATTAATTGACGAGATCGATTCAAAGGTATAGTTATAGAAGTTTGTTTGGTCAAGATTAGCAGATGACAAGTTTCGTAGCTGGTTCTGCTTTTGACGTTTTTACAGGTAAATAAGGTCACTAATTAGATTAAAAATACCAATGTTAGGCTCAAGAAAACACTCTATGAGGTAACAGCAAGAATTGTCTTTGAAAAAAAAACACCCTTTTTTACTGTGCTTCTGTATTTGAAGGTGAGATTCCGGCCAAAACTTCCGCATCAATGTCGTTTTCCTCTGTATAATTCTTGGAATCGCTTCTTACTTGTACAAGTGAGTTCACTTTTTCCATCTTTCTCTAAAAATGTGTTAAGAAGAGGGAACTTTCCCAGAAGATTTTGAAGAAAAAACATGCGATTCTCTGCTAACACATGTCATGTTTGTGCAGTATATGAAGCTGAGTTGGATTAAGAGCTTATTGTTCAAGTCGTTGAACTATGGGATAGCCCTGAGTTGCGAGGTAAATTTGGAAGAACATTCATTGACTTCAATACTGCACTTCAATGATCTTCTTAGCTTTCTGTAG ATGAAGAAGAAACAATACTCCAACAATTTCTATCTCCACGTTTCTGCTTCATTCTTCCTCCTGCCCTTGTTCTTCATCTCCCTCGCCTATGCCAAGATCACCGTAATCGATCTCATCTTCCGAGTAGATTCCGTTTGCCAGAGATACGAGAAGTATGATGTTCAGAAACAGCGCGAGCTCAATGCTTATGGTGATGGTGTCTTTTCTCGCCTCTTCGCTGCCGTTGAACTCGAAATCCATGCCGCTCTTCAGATTAGGGCTGCTGCAGTTGCGATGAATGCCGAGGTTCGACGGAAGAAGGCCCGATTGATGGATGAAGTGCCGAAACTTTGTAAATTGGCTCTCAAGAAGGAATTGAACAGCCAAGTTCCATTAATTGACGAGATCGATTCAAAGGTGAGATTCCGGCCAAAACTTCCGCATCAATGTCGTTTTCCTCTGTATAATTCTTGGAATCGCTTCTTACTTGTACAATATATGAAGCTGAGTTGGATTAAGAGCTTATTGTTCAAGTCGTTGAACTATGGGATAGCCCTGAGTTGCGAGGTAAATTTGGAAGAACATTCATTGACTTCAATACTGCACTTCAATGATCTTCTTAGCTTTCTGTAG ATGAAGAAGAAACAATACTCCAACAATTTCTATCTCCACGTTTCTGCTTCATTCTTCCTCCTGCCCTTGTTCTTCATCTCCCTCGCCTATGCCAAGATCACCGTAATCGATCTCATCTTCCGAGTAGATTCCGTTTGCCAGAGATACGAGAAGTATGATGTTCAGAAACAGCGCGAGCTCAATGCTTATGGTGATGGTGTCTTTTCTCGCCTCTTCGCTGCCGTTGAACTCGAAATCCATGCCGCTCTTCAGATTAGGGCTGCTGCAGTTGCGATGAATGCCGAGGTTCGACGGAAGAAGGCCCGATTGATGGATGAAGTGCCGAAACTTTGTAAATTGGCTCTCAAGAAGGAATTGAACAGCCAAGTTCCATTAATTGACGAGATCGATTCAAAGGTGAGATTCCGGCCAAAACTTCCGCATCAATGTCGTTTTCCTCTGTATAATTCTTGGAATCGCTTCTTACTTGTACAATATATGAAGCTGAGTTGGATTAAGAGCTTATTGTTCAAGTCGTTGAACTATGGGATAGCCCTGAGTTGCGAGGTAAATTTGGAAGAACATTCATTGACTTCAATACTGCACTTCAATGATCTTCTTAGCTTTCTGTAG MKKKQYSNNFYLHVSASFFLLPLFFISLAYAKITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQIRAAAVAMNAEVRRKKARLMDEVPKLCKLALKKELNSQVPLIDEIDSKVRFRPKLPHQCRFPLYNSWNRFLLVQYMKLSWIKSLLFKSLNYGIALSCEVNLEEHSLTSILHFNDLLSFL Homology
BLAST of Csor.00g101630 vs. ExPASy Swiss-Prot
Match: Q9SF29 (Syntaxin-71 OS=Arabidopsis thaliana OX=3702 GN=SYP71 PE=1 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.9e-19 Identity = 53/94 (56.38%), Postives = 69/94 (73.40%), Query Frame = 0
BLAST of Csor.00g101630 vs. ExPASy Swiss-Prot
Match: Q94KK6 (Syntaxin-72 OS=Arabidopsis thaliana OX=3702 GN=SYP72 PE=2 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.2e-18 Identity = 52/92 (56.52%), Postives = 67/92 (72.83%), Query Frame = 0
BLAST of Csor.00g101630 vs. ExPASy Swiss-Prot
Match: Q94KK5 (Syntaxin-73 OS=Arabidopsis thaliana OX=3702 GN=SYP73 PE=2 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.2e-18 Identity = 55/120 (45.83%), Postives = 78/120 (65.00%), Query Frame = 0
BLAST of Csor.00g101630 vs. NCBI nr
Match: KAG6570774.1 (Syntaxin-71, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 386 bits (992), Expect = 5.02e-135 Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0
BLAST of Csor.00g101630 vs. NCBI nr
Match: KAG7010621.1 (Syntaxin-71, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 279 bits (714), Expect = 4.08e-90 Identity = 179/318 (56.29%), Postives = 180/318 (56.60%), Query Frame = 0
BLAST of Csor.00g101630 vs. NCBI nr
Match: XP_023512260.1 (syntaxin-71-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 192 bits (488), Expect = 5.66e-58 Identity = 113/154 (73.38%), Postives = 121/154 (78.57%), Query Frame = 0
BLAST of Csor.00g101630 vs. NCBI nr
Match: XP_031743863.1 (syntaxin-71 isoform X2 [Cucumis sativus]) HSP 1 Score: 129 bits (323), Expect = 5.38e-33 Identity = 77/120 (64.17%), Postives = 90/120 (75.00%), Query Frame = 0
BLAST of Csor.00g101630 vs. NCBI nr
Match: KAG7013902.1 (Syntaxin-71, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 130 bits (326), Expect = 7.82e-33 Identity = 78/123 (63.41%), Postives = 93/123 (75.61%), Query Frame = 0
BLAST of Csor.00g101630 vs. ExPASy TrEMBL
Match: A0A0A0KFY5 (t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G294430 PE=3 SV=1) HSP 1 Score: 129 bits (323), Expect = 2.61e-33 Identity = 77/120 (64.17%), Postives = 90/120 (75.00%), Query Frame = 0
BLAST of Csor.00g101630 vs. ExPASy TrEMBL
Match: A0A6J1K481 (syntaxin-71-like OS=Cucurbita maxima OX=3661 GN=LOC111491035 PE=3 SV=1) HSP 1 Score: 126 bits (316), Expect = 5.29e-32 Identity = 76/120 (63.33%), Postives = 90/120 (75.00%), Query Frame = 0
BLAST of Csor.00g101630 vs. ExPASy TrEMBL
Match: A0A6J1H0Z7 (syntaxin-71-like OS=Cucurbita moschata OX=3662 GN=LOC111459427 PE=3 SV=1) HSP 1 Score: 126 bits (316), Expect = 5.29e-32 Identity = 76/120 (63.33%), Postives = 90/120 (75.00%), Query Frame = 0
BLAST of Csor.00g101630 vs. ExPASy TrEMBL
Match: A0A1S3CKB8 (syntaxin-71 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501939 PE=3 SV=1) HSP 1 Score: 125 bits (315), Expect = 7.28e-32 Identity = 77/120 (64.17%), Postives = 88/120 (73.33%), Query Frame = 0
BLAST of Csor.00g101630 vs. ExPASy TrEMBL
Match: A0A1S3CKC3 (syntaxin-71 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501939 PE=3 SV=1) HSP 1 Score: 125 bits (315), Expect = 1.53e-31 Identity = 77/120 (64.17%), Postives = 88/120 (73.33%), Query Frame = 0
BLAST of Csor.00g101630 vs. TAIR 10
Match: AT3G09740.1 (syntaxin of plants 71 ) HSP 1 Score: 97.4 bits (241), Expect = 1.4e-20 Identity = 53/94 (56.38%), Postives = 69/94 (73.40%), Query Frame = 0
BLAST of Csor.00g101630 vs. TAIR 10
Match: AT3G61450.1 (syntaxin of plants 73 ) HSP 1 Score: 94.7 bits (234), Expect = 8.9e-20 Identity = 55/120 (45.83%), Postives = 78/120 (65.00%), Query Frame = 0
BLAST of Csor.00g101630 vs. TAIR 10
Match: AT3G45280.1 (syntaxin of plants 72 ) HSP 1 Score: 94.7 bits (234), Expect = 8.9e-20 Identity = 52/92 (56.52%), Postives = 67/92 (72.83%), Query Frame = 0
BLAST of Csor.00g101630 vs. TAIR 10
Match: AT3G61450.2 (syntaxin of plants 73 ) HSP 1 Score: 94.7 bits (234), Expect = 8.9e-20 Identity = 55/120 (45.83%), Postives = 78/120 (65.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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