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Csor.00g101610 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTGTCGTCGGCGTTCTAGCTTTGCAGGGATCTTTTAACGAGCACATCGCAGGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGCTATTGCTAGTTCCTTTTGGATGAATATGAATTGTTGTGTTATTGTGGCGCGCAGCTTTGAGAAGGCTCGGAGTGAAGGGCGTAGAGATAAGGAAGCCTGAGCAGCTTCTTAATGTAGCTTCTCTGATTATTCCTGGTGGAGAAAGCACCACCATGGCCAAACTTGCGGATCTCCATAACTTGGTTTATTCCTCTTTCCTCTACATATTGCATCTGTAATTGCACAAAATCGAAAATAGGAATAGCCTAAAAGTTGAAGCATCTTGCATTCAATCGTGTTTAAGTCGACATCTAATCTTTATTTCTCGATGCTATTGCCCCGATAAAGCTGTTTTCGCAGATTAGACATATCAGACATCTCAAATTGATGGTTTCATTATCATCTAGCTTAGAATTAGAATCGAGTGTATTTATGTTGTCGTAGTTTTGTGTATTTCCAGTTTCCTGCTTTGCGTGAGTTCGTTAGAATGGGGAAGCCCGTGTGGGGCACCTGTGCAGGGCTCATCTTTTTGGCAAACAAGGCTACTGGTGGATTTCCTTCCTCTTTTCCTCACCATTTCAACATCAATAAAATGCTTGAAATGCGCTCTAAACTTGGTATGGATACATGAATTTTCAGGACAGAAAACCGGTGGACAGGAGCTTGTTGGTGGGCTGGATTGTACTGTTCATAGAAACTTCTTTGGAAGTCAGGTAACTCTTGTTGCTTTCTCTTATTCGGTTCTGAAACTAGGAAATTGGCATGGAATGTGTTCAGGAATCAAATTTGCATGAAGCTATCTCTGCCTGTGTGGCACTGTAGCCGACATGAATTTTTCCCTTCAAGTCATCCTACTAGTTGAATCATCTTCTGATGTTTTTTTTGAATCATAGCATGTTGGAAAAATACAGCCATAAACAACAATCTGGGGAGCTTAGACACTTGTTAATGACCATTACGTGTTAGAAATCACGGACCTCCACAATGGTATGATATTGTTCACTTTGAGCATAAGCTCTCGTAGGCTTTGCTTTTAGTTTCCTCAAAAGGCCCCATACCAATGGAGATGTATTCCTTACTTATAAATCCATGATCGTCCCCTTAATTAGTCAATGTAGGATCCCTCCCAACAATCCTCACTAAGCTATTTGAAAATCTACCTTACTACGGGCTCAAATAATGACTTTTCCCCAATGAAAAGTTTCATACTTGATTTAAAATCCTCCCATCTCACACGTAGTATGAGATCTTCATTGAAGCATGGAGTTCAGAATGCAGAATCCTTGATGGTTTTGTTTGTACACAAGCTGATCCAAACATAATTATTGATGTTGATTCCGAATGTTCTGTTTTTCCCCGGATACATGTTATCAGCTTATTGTTGAAGTTCGCTTTATATTCACTTGTCCATTTCTTGAGTTCAGAGTTTCCTAATTTAAGAAGAGATCATTATTATGTAGCTTCAAAGCTTTGAGGCAGAGCTGTCGATACCAGAGCTAGTGTCTACTGAAGGTGGTCCGGAAACATTTCGTGGAGTTTTCATCCGAGCTCCTGCAATTCTTGAAGTGGGATCAGACGTCCAAGTGCTGGCTCACTGCCCTGTCTCTTCAAACTCTTCCTTGCATTCAGATTCCTCTGGTGAAGGCAAAGAGGTTTGTTGTATCATCTCTACTCTGCTAGTGCCTCTAATTTGAACACCTAAATGATTGTAATCTGTATATATGAGCCACAAGTTTCAGACGGTACATATGTCGGTTTTGAGTCATAGTTCAGTAGAATTATAATTTCACTGTCACACTAGAGTGTGTTAAGTCGTGTTTCAAATTGGGTTTTAAAAAGGATTAGGCCAAAAATTAGGATACATTTTGAGAAAATAAAACTTCTATCGAAGAAGAGAAAGACTTTCATAAAATTTCTCGTAGAATCATGGATGAAGTTTTCATTTTGTACATGTCAGATCATGAATTAGTACTCTTTGTTTCGAACTTTTTCTTTTTGGAATGGAACTTTCTCTTTTCCTCCTTCCCCTTCACATTATGGTTTAATGAATATCTCAGGAAGAAGGTTCAGAAAGTAAAGTGATTGTAGCAGTGAGGCAAGGGAACTTACTCGCAACAGCCTTCCATCCTGAATTAACATCGGATAACAGATGGTATAGTGTAGTTCTAACTTGAAATACTCCACAGCATATTATGATGATCATCTCAAGTGAGTTACAACAATGGGCTATGCAGGCACAGTTACTTCCTAAAGATGGCTGGCGATGTTGAAGAAGCCTCAACTAGCACAGCAGCAGACATAGTAGATAGCGATTCGAGATTCGAAAAACCAAAGATCGACCTTCCGATTTTTCTTTAG ATGCCTGTCGTCGGCGTTCTAGCTTTGCAGGGATCTTTTAACGAGCACATCGCAGCTTTGAGAAGGCTCGGAGTGAAGGGCGTAGAGATAAGGAAGCCTGAGCAGCTTCTTAATGTAGCTTCTCTGATTATTCCTGGTGGAGAAAGCACCACCATGGCCAAACTTGCGGATCTCCATAACTTGTTTCCTGCTTTGCGTGAGTTCGTTAGAATGGGGAAGCCCGTGTGGGGCACCTGTGCAGGGCTCATCTTTTTGGCAAACAAGGCTACTGGACAGAAAACCGGTGGACAGGAGCTTGTTGGTGGGCTGGATTGTACTGTTCATAGAAACTTCTTTGGAAGTCAGCTTCAAAGCTTTGAGGCAGAGCTGTCGATACCAGAGCTAGTGTCTACTGAAGGTGGTCCGGAAACATTTCGTGGAGTTTTCATCCGAGCTCCTGCAATTCTTGAAGTGGGATCAGACGTCCAAGTGCTGGCTCACTGCCCTGTCTCTTCAAACTCTTCCTTGCATTCAGATTCCTCTGGTGAAGGCAAAGAGGAAGAAGGTTCAGAAAGTAAAGTGATTGTAGCAGTGAGGCAAGGGAACTTACTCGCAACAGCCTTCCATCCTGAATTAACATCGGATAACAGATGGCACAGTTACTTCCTAAAGATGGCTGGCGATGTTGAAGAAGCCTCAACTAGCACAGCAGCAGACATAGTAGATAGCGATTCGAGATTCGAAAAACCAAAGATCGACCTTCCGATTTTTCTTTAG ATGCCTGTCGTCGGCGTTCTAGCTTTGCAGGGATCTTTTAACGAGCACATCGCAGCTTTGAGAAGGCTCGGAGTGAAGGGCGTAGAGATAAGGAAGCCTGAGCAGCTTCTTAATGTAGCTTCTCTGATTATTCCTGGTGGAGAAAGCACCACCATGGCCAAACTTGCGGATCTCCATAACTTGTTTCCTGCTTTGCGTGAGTTCGTTAGAATGGGGAAGCCCGTGTGGGGCACCTGTGCAGGGCTCATCTTTTTGGCAAACAAGGCTACTGGACAGAAAACCGGTGGACAGGAGCTTGTTGGTGGGCTGGATTGTACTGTTCATAGAAACTTCTTTGGAAGTCAGCTTCAAAGCTTTGAGGCAGAGCTGTCGATACCAGAGCTAGTGTCTACTGAAGGTGGTCCGGAAACATTTCGTGGAGTTTTCATCCGAGCTCCTGCAATTCTTGAAGTGGGATCAGACGTCCAAGTGCTGGCTCACTGCCCTGTCTCTTCAAACTCTTCCTTGCATTCAGATTCCTCTGGTGAAGGCAAAGAGGAAGAAGGTTCAGAAAGTAAAGTGATTGTAGCAGTGAGGCAAGGGAACTTACTCGCAACAGCCTTCCATCCTGAATTAACATCGGATAACAGATGGCACAGTTACTTCCTAAAGATGGCTGGCGATGTTGAAGAAGCCTCAACTAGCACAGCAGCAGACATAGTAGATAGCGATTCGAGATTCGAAAAACCAAAGATCGACCTTCCGATTTTTCTTTAG MPVVGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLADLHNLFPALREFVRMGKPVWGTCAGLIFLANKATGQKTGGQELVGGLDCTVHRNFFGSQLQSFEAELSIPELVSTEGGPETFRGVFIRAPAILEVGSDVQVLAHCPVSSNSSLHSDSSGEGKEEEGSESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEEASTSTAADIVDSDSRFEKPKIDLPIFL Homology
BLAST of Csor.00g101610 vs. ExPASy Swiss-Prot
Match: Q8LAD0 (Probable pyridoxal 5'-phosphate synthase subunit PDX2 OS=Arabidopsis thaliana OX=3702 GN=PDX2 PE=1 SV=1) HSP 1 Score: 359.8 bits (922), Expect = 2.6e-98 Identity = 180/252 (71.43%), Postives = 214/252 (84.92%), Query Frame = 0
BLAST of Csor.00g101610 vs. ExPASy Swiss-Prot
Match: Q3Z8V9 (Pyridoxal 5'-phosphate synthase subunit PdxT OS=Dehalococcoides mccartyi (strain ATCC BAA-2266 / KCTC 15142 / 195) OX=243164 GN=pdxT PE=3 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 1.6e-44 Identity = 103/218 (47.25%), Postives = 133/218 (61.01%), Query Frame = 0
BLAST of Csor.00g101610 vs. ExPASy Swiss-Prot
Match: A9WFU0 (Pyridoxal 5'-phosphate synthase subunit PdxT OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) OX=324602 GN=pdxT PE=3 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 4.8e-44 Identity = 98/215 (45.58%), Postives = 129/215 (60.00%), Query Frame = 0
BLAST of Csor.00g101610 vs. ExPASy Swiss-Prot
Match: B9LIK4 (Pyridoxal 5'-phosphate synthase subunit PdxT OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) OX=480224 GN=pdxT PE=3 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 4.8e-44 Identity = 98/215 (45.58%), Postives = 129/215 (60.00%), Query Frame = 0
BLAST of Csor.00g101610 vs. ExPASy Swiss-Prot
Match: B8G664 (Pyridoxal 5'-phosphate synthase subunit PdxT OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) OX=326427 GN=pdxT PE=3 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 1.1e-43 Identity = 98/215 (45.58%), Postives = 128/215 (59.53%), Query Frame = 0
BLAST of Csor.00g101610 vs. NCBI nr
Match: KAG6570776.1 (putative pyridoxal 5'-phosphate synthase subunit PDX2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 495 bits (1274), Expect = 2.03e-176 Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0
BLAST of Csor.00g101610 vs. NCBI nr
Match: XP_022944556.1 (probable pyridoxal 5'-phosphate synthase subunit PDX2 [Cucurbita moschata] >KAG7010623.1 putative pyridoxal 5'-phosphate synthase subunit PDX2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 493 bits (1268), Expect = 1.67e-175 Identity = 249/251 (99.20%), Postives = 251/251 (100.00%), Query Frame = 0
BLAST of Csor.00g101610 vs. NCBI nr
Match: XP_023511885.1 (probable pyridoxal 5'-phosphate synthase subunit PDX2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 487 bits (1253), Expect = 3.22e-173 Identity = 245/251 (97.61%), Postives = 250/251 (99.60%), Query Frame = 0
BLAST of Csor.00g101610 vs. NCBI nr
Match: XP_022986058.1 (probable pyridoxal 5'-phosphate synthase subunit PDX2 [Cucurbita maxima]) HSP 1 Score: 478 bits (1230), Expect = 1.29e-169 Identity = 242/251 (96.41%), Postives = 246/251 (98.01%), Query Frame = 0
BLAST of Csor.00g101610 vs. NCBI nr
Match: XP_023534477.1 (probable pyridoxal 5'-phosphate synthase subunit PDX2 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 438 bits (1127), Expect = 4.98e-154 Identity = 222/251 (88.45%), Postives = 238/251 (94.82%), Query Frame = 0
BLAST of Csor.00g101610 vs. ExPASy TrEMBL
Match: A0A6J1FUQ8 (Glutaminase OS=Cucurbita moschata OX=3662 GN=LOC111448973 PE=3 SV=1) HSP 1 Score: 493 bits (1268), Expect = 8.07e-176 Identity = 249/251 (99.20%), Postives = 251/251 (100.00%), Query Frame = 0
BLAST of Csor.00g101610 vs. ExPASy TrEMBL
Match: A0A6J1JFE0 (Glutaminase OS=Cucurbita maxima OX=3661 GN=LOC111483918 PE=3 SV=1) HSP 1 Score: 478 bits (1230), Expect = 6.23e-170 Identity = 242/251 (96.41%), Postives = 246/251 (98.01%), Query Frame = 0
BLAST of Csor.00g101610 vs. ExPASy TrEMBL
Match: A0A6J1H447 (Glutaminase OS=Cucurbita moschata OX=3662 GN=LOC111459428 PE=3 SV=1) HSP 1 Score: 437 bits (1124), Expect = 6.91e-154 Identity = 222/251 (88.45%), Postives = 237/251 (94.42%), Query Frame = 0
BLAST of Csor.00g101610 vs. ExPASy TrEMBL
Match: A0A1S3CLW1 (Glutaminase OS=Cucumis melo OX=3656 GN=LOC103501941 PE=3 SV=1) HSP 1 Score: 437 bits (1123), Expect = 9.82e-154 Identity = 221/251 (88.05%), Postives = 239/251 (95.22%), Query Frame = 0
BLAST of Csor.00g101610 vs. ExPASy TrEMBL
Match: A0A0A0KAR5 (Glutaminase OS=Cucumis sativus OX=3659 GN=Csa_6G139790 PE=3 SV=1) HSP 1 Score: 436 bits (1121), Expect = 1.98e-153 Identity = 222/251 (88.45%), Postives = 238/251 (94.82%), Query Frame = 0
BLAST of Csor.00g101610 vs. TAIR 10
Match: AT5G60540.1 (pyridoxine biosynthesis 2 ) HSP 1 Score: 359.8 bits (922), Expect = 1.8e-99 Identity = 180/252 (71.43%), Postives = 214/252 (84.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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