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Csor.00g101560 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGACCGGAAAAAGCTGTTACGGTCGCTCCGATTACCGTTTTCTCACCGGCCACCACCGCCGCCCGCACTCGTTCACGTCGGAGTTGTCGTTTGAATTCAACGAATCGGACATTTTCAACCTCGGTAGTTCGGAGTCTCCGGAGAGGCGGAGATCTCCAACTCCGGGGACGTCGATATCGAAGAAAGGTTCGTCGAAACGGGGGGAGGGCGGCGGAGGTGGAGCGTCGTCGCTGCCGGTGAATATTCCGGATTGGTCGAAGATTCTGAAGGAGGAGTATAGAGAGGAGCGGAGCTCGGAATACGAGGGGGATTTGGAGGAGGAAAGCGACGGCGACGAGGAAATGAGAGTACCGCCTCACGAGTTTTTGGCGAGGTCGAGAACGGCGTCGTTTTCGGTGCAGGAAGGAATTGGGAGGACGTTGAAAGGGAGAGATCTGAGTAGGGTCCGAAATGCAATTTGGGAAAAAACTGGGTTCCAGGATTGAAATATCTTAGAAATAAACCAAACCATCACAATTTTACGACATGTAGTTTTAGCACGTAAAACAAAACAAAAACTGGGAAAGGAAGGATTTCTCCGACGCGTCGTCTTCTTCGTTTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTCACGTTTGCCATATTGGCGTAGCTGGCGAGTTTCTGGGAAATGGATGTTTCATTAATGGGTGTAGTATTAAGCAAAATATATCTTTTTCCTCATATTCTAAAAATAAAAATAACCTTTTAATAAATATTATTTTTGTGTTTTAATTTTTAAAATACTCTTGAATTAACTCCATAGCTTCACTTATCTTGTATCAGGTGCCACAAAATAATTTCTCCCATTAAGCTAAATGGGGTCGGAGATCATCTTCCATCCCTGTCCAGTTCTGTTTTACTTTTATATATAAATAAAGAAAAAACTAATCGAAAATTTTGAATTTTCAAATATTATTAGATTTATTACGATGTTGTATACATTATATTAAAAAATATAAAATATTTTGAATATGTATATATTTTTAAATGTATAAAGAAAAATTCTCACAAAAATGAAAAATTATAGTCCTCACTATTTTCATGAATATCTTTAAATATAATATAAATAAGAGGTAGATAAAAGGAAAAAGTTGACGTGGCTGCTGACTTGTTGATTGAGTAGATGACGTGGAAAAAGAGACCAACGTGGCAATAAAGAACCAATCCTACCCATTAAAAAAAAATTCGAAAATAAAAACTTTTTGCCATCTTTCAACTCCGAAATGAAATGGATTCCAGGATCTCCGTCAGCCAACTCTAGCTGTTCTTCAGCCCCAACACCGCCGCCGCCGCCACCACCGCCGCAAATTTCATCTGCAACCAACTCACCACCACCCTCTAAGTATGGGCTTTTGTAG ATGGCGACCGGAAAAAGCTGTTACGGTCGCTCCGATTACCGTTTTCTCACCGGCCACCACCGCCGCCCGCACTCGTTCACGTCGGAGTTGTCGTTTGAATTCAACGAATCGGACATTTTCAACCTCGGTAGTTCGGAGTCTCCGGAGAGGCGGAGATCTCCAACTCCGGGGACGTCGATATCGAAGAAAGGTTCGTCGAAACGGGGGGAGGGCGGCGGAGGTGGAGCGTCGTCGCTGCCGGTGAATATTCCGGATTGGTCGAAGATTCTGAAGGAGGAGTATAGAGAGGAGCGGAGCTCGGAATACGAGGGGGATTTGGAGGAGGAAAGCGACGGCGACGAGGAAATGAGAGTACCGCCTCACGAGTTTTTGGCGAGGTCGAGAACGGCGTCGTTTTCGGTGCAGGAAGGAATTGGGAGGACGTTGAAAGGGAGAGATCTGAGATCTCCGTCAGCCAACTCTAGCTGTTCTTCAGCCCCAACACCGCCGCCGCCGCCACCACCGCCGCAAATTTCATCTGCAACCAACTCACCACCACCCTCTAAGTATGGGCTTTTGTAG ATGGCGACCGGAAAAAGCTGTTACGGTCGCTCCGATTACCGTTTTCTCACCGGCCACCACCGCCGCCCGCACTCGTTCACGTCGGAGTTGTCGTTTGAATTCAACGAATCGGACATTTTCAACCTCGGTAGTTCGGAGTCTCCGGAGAGGCGGAGATCTCCAACTCCGGGGACGTCGATATCGAAGAAAGGTTCGTCGAAACGGGGGGAGGGCGGCGGAGGTGGAGCGTCGTCGCTGCCGGTGAATATTCCGGATTGGTCGAAGATTCTGAAGGAGGAGTATAGAGAGGAGCGGAGCTCGGAATACGAGGGGGATTTGGAGGAGGAAAGCGACGGCGACGAGGAAATGAGAGTACCGCCTCACGAGTTTTTGGCGAGGTCGAGAACGGCGTCGTTTTCGGTGCAGGAAGGAATTGGGAGGACGTTGAAAGGGAGAGATCTGAGATCTCCGTCAGCCAACTCTAGCTGTTCTTCAGCCCCAACACCGCCGCCGCCGCCACCACCGCCGCAAATTTCATCTGCAACCAACTCACCACCACCCTCTAAGTATGGGCTTTTGTAG MATGKSCYGRSDYRFLTGHHRRPHSFTSELSFEFNESDIFNLGSSESPERRRSPTPGTSISKKGSSKRGEGGGGGASSLPVNIPDWSKILKEEYREERSSEYEGDLEEESDGDEEMRVPPHEFLARSRTASFSVQEGIGRTLKGRDLRSPSANSSCSSAPTPPPPPPPPQISSATNSPPPSKYGLL Homology
BLAST of Csor.00g101560 vs. NCBI nr
Match: KAG6570781.1 (hypothetical protein SDJN03_29696, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 365 bits (937), Expect = 3.34e-127 Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0
BLAST of Csor.00g101560 vs. NCBI nr
Match: KAG7010627.1 (hypothetical protein SDJN02_27421, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 296 bits (757), Expect = 3.99e-100 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of Csor.00g101560 vs. NCBI nr
Match: XP_022944337.1 (uncharacterized protein LOC111448807 [Cucurbita moschata]) HSP 1 Score: 295 bits (754), Expect = 1.14e-99 Identity = 146/147 (99.32%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of Csor.00g101560 vs. NCBI nr
Match: XP_022985841.1 (uncharacterized protein LOC111483768 [Cucurbita maxima]) HSP 1 Score: 283 bits (725), Expect = 3.00e-95 Identity = 141/147 (95.92%), Postives = 142/147 (96.60%), Query Frame = 0
BLAST of Csor.00g101560 vs. NCBI nr
Match: XP_023513244.1 (uncharacterized protein LOC111777757 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 281 bits (720), Expect = 1.79e-94 Identity = 142/148 (95.95%), Postives = 143/148 (96.62%), Query Frame = 0
BLAST of Csor.00g101560 vs. ExPASy TrEMBL
Match: A0A6J1FVG2 (uncharacterized protein LOC111448807 OS=Cucurbita moschata OX=3662 GN=LOC111448807 PE=4 SV=1) HSP 1 Score: 295 bits (754), Expect = 5.53e-100 Identity = 146/147 (99.32%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of Csor.00g101560 vs. ExPASy TrEMBL
Match: A0A6J1J9C1 (uncharacterized protein LOC111483768 OS=Cucurbita maxima OX=3661 GN=LOC111483768 PE=4 SV=1) HSP 1 Score: 283 bits (725), Expect = 1.45e-95 Identity = 141/147 (95.92%), Postives = 142/147 (96.60%), Query Frame = 0
BLAST of Csor.00g101560 vs. ExPASy TrEMBL
Match: A0A6J1KAF0 (uncharacterized protein LOC111491571 OS=Cucurbita maxima OX=3661 GN=LOC111491571 PE=4 SV=1) HSP 1 Score: 195 bits (495), Expect = 1.67e-60 Identity = 111/155 (71.61%), Postives = 121/155 (78.06%), Query Frame = 0
BLAST of Csor.00g101560 vs. ExPASy TrEMBL
Match: A0A6J1CIE6 (uncharacterized protein LOC111011233 OS=Momordica charantia OX=3673 GN=LOC111011233 PE=4 SV=1) HSP 1 Score: 193 bits (491), Expect = 7.23e-60 Identity = 105/154 (68.18%), Postives = 116/154 (75.32%), Query Frame = 0
BLAST of Csor.00g101560 vs. ExPASy TrEMBL
Match: A0A5A7SXR0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00170 PE=4 SV=1) HSP 1 Score: 191 bits (485), Expect = 4.86e-59 Identity = 107/155 (69.03%), Postives = 118/155 (76.13%), Query Frame = 0
BLAST of Csor.00g101560 vs. TAIR 10
Match: AT5G60680.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 119.4 bits (298), Expect = 3.1e-27 Identity = 72/149 (48.32%), Postives = 95/149 (63.76%), Query Frame = 0
BLAST of Csor.00g101560 vs. TAIR 10
Match: AT2G28400.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 105.1 bits (261), Expect = 6.0e-23 Identity = 74/152 (48.68%), Postives = 89/152 (58.55%), Query Frame = 0
BLAST of Csor.00g101560 vs. TAIR 10
Match: AT3G45210.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 93.6 bits (231), Expect = 1.8e-19 Identity = 66/146 (45.21%), Postives = 89/146 (60.96%), Query Frame = 0
BLAST of Csor.00g101560 vs. TAIR 10
Match: AT5G03230.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 92.0 bits (227), Expect = 5.3e-19 Identity = 61/132 (46.21%), Postives = 79/132 (59.85%), Query Frame = 0
BLAST of Csor.00g101560 vs. TAIR 10
Match: AT4G04630.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 73.9 bits (180), Expect = 1.5e-13 Identity = 55/144 (38.19%), Postives = 79/144 (54.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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