Csor.00g101310 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g101310
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr20: 2545135 .. 2545452 (+)
RNA-Seq ExpressionCsor.00g101310
SyntenyCsor.00g101310
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCCTTTTCCCATTTCTCTTTTATCTCCTCTTCTTACTTCTTCTATCTTCTCCTTCCCCATCAATGGCTGCTCGCTGCGTCCCTCCCAGCGCGCCCAGCACCATTGTTACTCCCCTTGCCACTCCCGAAGCGGAAGACTACGAGACCGTCAAGCCTCAGCTGAATCGGAAGAGGCTTGTTTTTGGTGGCAATGAAGTCAAAAGCTGCCTCCCTAAAGGCTTCCGCCGCTCCTCTGCGCCTAGCCGCTTTGTTAACTATCATACTTCTGGTGGCTGTTCTTCAACCACTGATCATTCCATTAATACGCCTTGA

mRNA sequence

ATGGCTTCCCTTTTCCCATTTCTCTTTTATCTCCTCTTCTTACTTCTTCTATCTTCTCCTTCCCCATCAATGGCTGCTCGCTGCGTCCCTCCCAGCGCGCCCAGCACCATTGTTACTCCCCTTGCCACTCCCGAAGCGGAAGACTACGAGACCGTCAAGCCTCAGCTGAATCGGAAGAGGCTTGTTTTTGGTGGCAATGAAGTCAAAAGCTGCCTCCCTAAAGGCTTCCGCCGCTCCTCTGCGCCTAGCCGCTTTGTTAACTATCATACTTCTGGTGGCTGTTCTTCAACCACTGATCATTCCATTAATACGCCTTGA

Coding sequence (CDS)

ATGGCTTCCCTTTTCCCATTTCTCTTTTATCTCCTCTTCTTACTTCTTCTATCTTCTCCTTCCCCATCAATGGCTGCTCGCTGCGTCCCTCCCAGCGCGCCCAGCACCATTGTTACTCCCCTTGCCACTCCCGAAGCGGAAGACTACGAGACCGTCAAGCCTCAGCTGAATCGGAAGAGGCTTGTTTTTGGTGGCAATGAAGTCAAAAGCTGCCTCCCTAAAGGCTTCCGCCGCTCCTCTGCGCCTAGCCGCTTTGTTAACTATCATACTTCTGGTGGCTGTTCTTCAACCACTGATCATTCCATTAATACGCCTTGA

Protein sequence

MASLFPFLFYLLFLLLLSSPSPSMAARCVPPSAPSTIVTPLATPEAEDYETVKPQLNRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSSTTDHSINTP
Homology
BLAST of Csor.00g101310 vs. NCBI nr
Match: KAG6570806.1 (hypothetical protein SDJN03_29721, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 206 bits (523), Expect = 1.07e-66
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0

Query: 1   MASLFPFLFYLLFLLLLSSPSPSMAARCVPPSAPSTIVTPLATPEAEDYETVKPQLNRKR 60
           MASLFPFLFYLLFLLLLSSPSPSMAARCVPPSAPSTIVTPLATPEAEDYETVKPQLNRKR
Sbjct: 1   MASLFPFLFYLLFLLLLSSPSPSMAARCVPPSAPSTIVTPLATPEAEDYETVKPQLNRKR 60

Query: 61  LVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSSTTDHSINTP 105
           LVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSSTTDHSINTP
Sbjct: 61  LVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSSTTDHSINTP 105

BLAST of Csor.00g101310 vs. NCBI nr
Match: KAE8646888.1 (hypothetical protein Csa_020968, partial [Cucumis sativus])

HSP 1 Score: 167 bits (422), Expect = 2.98e-51
Identity = 92/104 (88.46%), Postives = 95/104 (91.35%), Query Frame = 0

Query: 1   MASLFPFLF-YLLFLLLLSSPSPSMAARCVPPSAPSTIVTPLATPE-AEDYETVKPQL-N 60
           MASLFP+ F YLLFLLLLSSP+ SM ARCVPPSAPSTIV PLATP+ AE YETVKPQL N
Sbjct: 3   MASLFPYFFIYLLFLLLLSSPTQSMCARCVPPSAPSTIVRPLATPDNAEAYETVKPQLIN 62

Query: 61  RKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSSTTDHS 101
           RKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCS TTDHS
Sbjct: 63  RKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHS 106

BLAST of Csor.00g101310 vs. NCBI nr
Match: KAA0035234.1 (hypothetical protein E6C27_scaffold228G00110 [Cucumis melo var. makuwa] >TYK22389.1 hypothetical protein E5676_scaffold173G00130 [Cucumis melo var. makuwa])

HSP 1 Score: 145 bits (365), Expect = 7.46e-43
Identity = 77/84 (91.67%), Postives = 78/84 (92.86%), Query Frame = 0

Query: 24  MAARCVPPSAPSTIVTPLA-TPE-AEDYETVKPQL-NRKRLVFGGNEVKSCLPKGFRRSS 83
           M ARCVPPSAPSTIV PLA TP+ AEDYETVKPQL NRKRLVFGGNEVKSCLPKGFRRSS
Sbjct: 1   MCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLINRKRLVFGGNEVKSCLPKGFRRSS 60

Query: 84  APSRFVNYHTSGGCSSTTDHSINT 104
           APSRFVNYHTSGGCS TTDHSINT
Sbjct: 61  APSRFVNYHTSGGCSPTTDHSINT 84

BLAST of Csor.00g101310 vs. NCBI nr
Match: KAF3961747.1 (hypothetical protein CMV_013666 [Castanea mollissima])

HSP 1 Score: 102 bits (253), Expect = 1.39e-25
Identity = 58/93 (62.37%), Postives = 66/93 (70.97%), Query Frame = 0

Query: 1  MASLFPFLFYLLFLLLLSSPSPSMAARCVPPSAPSTIVTPLATPEAEDYETVKPQLNRKR 60
          M++ F +   L  LLLLSS   +MAAR +P SAPSTIV PL + EA+DY T+KP    K 
Sbjct: 1  MSTSFYYTLVLCLLLLLSSIDTNMAARKIPSSAPSTIVRPLVS-EAQDYVTMKPLFKHKH 60

Query: 61 LVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGG 93
           VF G EVKSCLPKGFR SSAPSRFVNYH  GG
Sbjct: 61 RVFRGKEVKSCLPKGFRHSSAPSRFVNYHALGG 92

BLAST of Csor.00g101310 vs. NCBI nr
Match: PQQ20695.1 (hypothetical protein Pyn_14613 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 93.2 bits (230), Expect = 4.45e-22
Identity = 49/76 (64.47%), Postives = 58/76 (76.32%), Query Frame = 0

Query: 23 SMAARCVPPSAPSTIVTPLATPEAEDYETVKPQ-LNRKRLVFGGNEVKSCLPKGFRRSSA 82
          S+AAR +P SAPST+V PL T   + Y ++KPQ LN K+ VF G EVK CLPKGFR +SA
Sbjct: 23 SLAARNIPSSAPSTMVRPLVTEGLDHYASMKPQDLNHKQQVFHGTEVKDCLPKGFRHASA 82

Query: 83 PSRFVNYHTSG-GCSS 96
          PSR+VNYHT G GCSS
Sbjct: 83 PSRYVNYHTLGQGCSS 98

BLAST of Csor.00g101310 vs. ExPASy TrEMBL
Match: A0A0A0KDD3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G147570 PE=4 SV=1)

HSP 1 Score: 172 bits (436), Expect = 1.09e-53
Identity = 95/107 (88.79%), Postives = 98/107 (91.59%), Query Frame = 0

Query: 1   MASLFPFLF-YLLFLLLLSSPSPSMAARCVPPSAPSTIVTPLATPE-AEDYETVKPQL-N 60
           MASLFP+ F YLLFLLLLSSP+ SM ARCVPPSAPSTIV PLATP+ AE YETVKPQL N
Sbjct: 1   MASLFPYFFIYLLFLLLLSSPTQSMCARCVPPSAPSTIVRPLATPDNAEAYETVKPQLIN 60

Query: 61  RKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSSTTDHSINT 104
           RKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCS TTDHSINT
Sbjct: 61  RKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHSINT 107

BLAST of Csor.00g101310 vs. ExPASy TrEMBL
Match: A0A5D3DGK4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold173G00130 PE=4 SV=1)

HSP 1 Score: 145 bits (365), Expect = 3.61e-43
Identity = 77/84 (91.67%), Postives = 78/84 (92.86%), Query Frame = 0

Query: 24  MAARCVPPSAPSTIVTPLA-TPE-AEDYETVKPQL-NRKRLVFGGNEVKSCLPKGFRRSS 83
           M ARCVPPSAPSTIV PLA TP+ AEDYETVKPQL NRKRLVFGGNEVKSCLPKGFRRSS
Sbjct: 1   MCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLINRKRLVFGGNEVKSCLPKGFRRSS 60

Query: 84  APSRFVNYHTSGGCSSTTDHSINT 104
           APSRFVNYHTSGGCS TTDHSINT
Sbjct: 61  APSRFVNYHTSGGCSPTTDHSINT 84

BLAST of Csor.00g101310 vs. ExPASy TrEMBL
Match: A0A314ZL66 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_14613 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.16e-22
Identity = 49/76 (64.47%), Postives = 58/76 (76.32%), Query Frame = 0

Query: 23 SMAARCVPPSAPSTIVTPLATPEAEDYETVKPQ-LNRKRLVFGGNEVKSCLPKGFRRSSA 82
          S+AAR +P SAPST+V PL T   + Y ++KPQ LN K+ VF G EVK CLPKGFR +SA
Sbjct: 23 SLAARNIPSSAPSTMVRPLVTEGLDHYASMKPQDLNHKQQVFHGTEVKDCLPKGFRHASA 82

Query: 83 PSRFVNYHTSG-GCSS 96
          PSR+VNYHT G GCSS
Sbjct: 83 PSRYVNYHTLGQGCSS 98

BLAST of Csor.00g101310 vs. ExPASy TrEMBL
Match: A0A2P5CZN8 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_109280 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.51e-22
Identity = 54/94 (57.45%), Postives = 63/94 (67.02%), Query Frame = 0

Query: 8   LFYLLFLLLLSSPSPSMAARCVPPSAPSTIVTPLATPEAEDYETVKPQLNR-KRLVFGGN 67
           L Y + LLLLSS   SMA R +P SAPST+V PL T   +DY +++P LN  +  VF G 
Sbjct: 33  LLYSIILLLLSSFDVSMAGRAIPSSAPSTVVRPLVTDADQDYVSLRPHLNPGQNQVFRGR 92

Query: 68  EVKSCLPKGFRRSSAPSRFVNYHTSG----GCSS 96
           E K CLPKGFR +SAPSRFVNYH  G    GCSS
Sbjct: 93  EFKGCLPKGFRHASAPSRFVNYHPLGALSPGCSS 126

BLAST of Csor.00g101310 vs. ExPASy TrEMBL
Match: A0A314YWA3 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_04778 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.06e-22
Identity = 49/76 (64.47%), Postives = 58/76 (76.32%), Query Frame = 0

Query: 23 SMAARCVPPSAPSTIVTPLATPEAEDYETVKPQ-LNRKRLVFGGNEVKSCLPKGFRRSSA 82
          S+AAR +P SAPST+V PL T   + Y ++KPQ LN K+ VF G EVK CLPKGFR +SA
Sbjct: 23 SLAARNIPSSAPSTMVRPLVTEGLDHYVSMKPQDLNHKQQVFHGTEVKDCLPKGFRHASA 82

Query: 83 PSRFVNYHTSG-GCSS 96
          PSR+VNYHT G GCSS
Sbjct: 83 PSRYVNYHTLGQGCSS 98

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6570806.11.07e-66100.00hypothetical protein SDJN03_29721, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAE8646888.12.98e-5188.46hypothetical protein Csa_020968, partial [Cucumis sativus][more]
KAA0035234.17.46e-4391.67hypothetical protein E6C27_scaffold228G00110 [Cucumis melo var. makuwa] >TYK2238... [more]
KAF3961747.11.39e-2562.37hypothetical protein CMV_013666 [Castanea mollissima][more]
PQQ20695.14.45e-2264.47hypothetical protein Pyn_14613 [Prunus yedoensis var. nudiflora][more]
Match NameE-valueIdentityDescription
A0A0A0KDD31.09e-5388.79Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G147570 PE=4 SV=1[more]
A0A5D3DGK43.61e-4391.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A314ZL662.16e-2264.47Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_146... [more]
A0A2P5CZN82.51e-2257.45Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A314YWA33.06e-2264.47Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_047... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36619OS04G0208900 PROTEINcoord: 7..100
NoneNo IPR availablePANTHERPTHR36619:SF2OS04G0208900 PROTEINcoord: 7..100

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g101310.m01Csor.00g101310.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane