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Csor.00g101290 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGAGAGCGACGAAGTCACATGGCATGCTCTTCAAACCCCATACTATAAATTCATTCAACACCCACATTACCATTATCATCGATCCAATGACTAAGCTTGTGACCGTAGCCATGAAGAAGAATGGCATTGTCAAGCTCAAGTCCGCCGTTGGGAAGCTGCAGAGAAGCCTCTCCTTAGGTCGGAGGTCTGATTCTGGTCAAGATGACTTCGATTACGACTCGACTCCGGTACCGGAAGATGTCAAAGAAGGACATTTTGCAGTTGTGGCAGTTGATGCTGAGGAGCCGAAACGGTTTGCTGTTCCGTTGAGTTGCTTGACGAATCCGACGTTTTTGAGACTGTTGGAGGCGGCGGCTGAGGAGTATGGATTTGATCATGAAGGTGCAGTGACCGTGCCATGTCGGCCGAGCGAGCTCGAGCAGATCTTGGCCGAGGAATAG ATGGTGAGAGCGACGAAGTCACATGGCATGCTCTTCAAACCCCATACTATAAATTCATTCAACACCCACATTACCATTATCATCGATCCAATGACTAAGCTTGTGACCGTAGCCATGAAGAAGAATGGCATTGTCAAGCTCAAGTCCGCCGTTGGGAAGCTGCAGAGAAGCCTCTCCTTAGGTCGGAGGTCTGATTCTGGTCAAGATGACTTCGATTACGACTCGACTCCGGTACCGGAAGATGTCAAAGAAGGACATTTTGCAGTTGTGGCAGTTGATGCTGAGGAGCCGAAACGGTTTGCTGTTCCGTTGAGTTGCTTGACGAATCCGACGTTTTTGAGACTGTTGGAGGCGGCGGCTGAGGAGTATGGATTTGATCATGAAGGTGCAGTGACCGTGCCATGTCGGCCGAGCGAGCTCGAGCAGATCTTGGCCGAGGAATAG ATGGTGAGAGCGACGAAGTCACATGGCATGCTCTTCAAACCCCATACTATAAATTCATTCAACACCCACATTACCATTATCATCGATCCAATGACTAAGCTTGTGACCGTAGCCATGAAGAAGAATGGCATTGTCAAGCTCAAGTCCGCCGTTGGGAAGCTGCAGAGAAGCCTCTCCTTAGGTCGGAGGTCTGATTCTGGTCAAGATGACTTCGATTACGACTCGACTCCGGTACCGGAAGATGTCAAAGAAGGACATTTTGCAGTTGTGGCAGTTGATGCTGAGGAGCCGAAACGGTTTGCTGTTCCGTTGAGTTGCTTGACGAATCCGACGTTTTTGAGACTGTTGGAGGCGGCGGCTGAGGAGTATGGATTTGATCATGAAGGTGCAGTGACCGTGCCATGTCGGCCGAGCGAGCTCGAGCAGATCTTGGCCGAGGAATAG MVRATKSHGMLFKPHTINSFNTHITIIIDPMTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPSELEQILAEE Homology
BLAST of Csor.00g101290 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 3.1e-11 Identity = 36/82 (43.90%), Postives = 50/82 (60.98%), Query Frame = 0
BLAST of Csor.00g101290 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.7e-09 Identity = 27/63 (42.86%), Postives = 41/63 (65.08%), Query Frame = 0
BLAST of Csor.00g101290 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 3.2e-08 Identity = 27/67 (40.30%), Postives = 41/67 (61.19%), Query Frame = 0
BLAST of Csor.00g101290 vs. ExPASy Swiss-Prot
Match: P33079 (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 7.9e-07 Identity = 27/66 (40.91%), Postives = 40/66 (60.61%), Query Frame = 0
BLAST of Csor.00g101290 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.8e-06 Identity = 25/58 (43.10%), Postives = 35/58 (60.34%), Query Frame = 0
BLAST of Csor.00g101290 vs. NCBI nr
Match: KAG6570808.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 290 bits (742), Expect = 9.51e-99 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of Csor.00g101290 vs. NCBI nr
Match: XP_023512258.1 (auxin-responsive protein SAUR50 [Cucurbita pepo subsp. pepo] >KAG7010648.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 229 bits (584), Expect = 4.32e-75 Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of Csor.00g101290 vs. NCBI nr
Match: XP_022986206.1 (auxin-responsive protein SAUR50 [Cucurbita maxima]) HSP 1 Score: 224 bits (570), Expect = 5.89e-73 Identity = 114/117 (97.44%), Postives = 116/117 (99.15%), Query Frame = 0
BLAST of Csor.00g101290 vs. NCBI nr
Match: XP_022944522.1 (auxin-responsive protein SAUR50 [Cucurbita moschata]) HSP 1 Score: 216 bits (550), Expect = 5.09e-70 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0
BLAST of Csor.00g101290 vs. NCBI nr
Match: XP_038902788.1 (auxin-responsive protein SAUR50-like [Benincasa hispida]) HSP 1 Score: 207 bits (526), Expect = 5.39e-66 Identity = 107/122 (87.70%), Postives = 113/122 (92.62%), Query Frame = 0
BLAST of Csor.00g101290 vs. ExPASy TrEMBL
Match: A0A6J1JAG6 (auxin-responsive protein SAUR50 OS=Cucurbita maxima OX=3661 GN=LOC111484020 PE=3 SV=1) HSP 1 Score: 224 bits (570), Expect = 2.85e-73 Identity = 114/117 (97.44%), Postives = 116/117 (99.15%), Query Frame = 0
BLAST of Csor.00g101290 vs. ExPASy TrEMBL
Match: A0A6J1FVW1 (auxin-responsive protein SAUR50 OS=Cucurbita moschata OX=3662 GN=LOC111448954 PE=3 SV=1) HSP 1 Score: 216 bits (550), Expect = 2.46e-70 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0
BLAST of Csor.00g101290 vs. ExPASy TrEMBL
Match: A0A0A0KGI2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G147590 PE=3 SV=1) HSP 1 Score: 203 bits (516), Expect = 8.71e-65 Identity = 106/123 (86.18%), Postives = 111/123 (90.24%), Query Frame = 0
BLAST of Csor.00g101290 vs. ExPASy TrEMBL
Match: A0A5D3DFC2 (Auxin-responsive protein SAUR32-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold173G00110 PE=3 SV=1) HSP 1 Score: 197 bits (501), Expect = 1.79e-62 Identity = 104/123 (84.55%), Postives = 111/123 (90.24%), Query Frame = 0
BLAST of Csor.00g101290 vs. ExPASy TrEMBL
Match: A0A1S3CNL2 (auxin-responsive protein SAUR32-like OS=Cucumis melo OX=3656 GN=LOC103502995 PE=3 SV=1) HSP 1 Score: 197 bits (501), Expect = 1.79e-62 Identity = 104/123 (84.55%), Postives = 111/123 (90.24%), Query Frame = 0
BLAST of Csor.00g101290 vs. TAIR 10
Match: AT2G28085.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 99.0 bits (245), Expect = 3.4e-21 Identity = 55/110 (50.00%), Postives = 69/110 (62.73%), Query Frame = 0
BLAST of Csor.00g101290 vs. TAIR 10
Match: AT3G09870.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 82.0 bits (201), Expect = 4.3e-16 Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 0
BLAST of Csor.00g101290 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 69.7 bits (169), Expect = 2.2e-12 Identity = 36/82 (43.90%), Postives = 50/82 (60.98%), Query Frame = 0
BLAST of Csor.00g101290 vs. TAIR 10
Match: AT1G19830.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 65.9 bits (159), Expect = 3.2e-11 Identity = 34/92 (36.96%), Postives = 52/92 (56.52%), Query Frame = 0
BLAST of Csor.00g101290 vs. TAIR 10
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 63.5 bits (153), Expect = 1.6e-10 Identity = 29/63 (46.03%), Postives = 41/63 (65.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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