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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCGCCATGGCACGTGTCGTGTCTGCTTGGCCTTGGGGGGTATGTTTCAGGTTCAACCGATCAGATTTTAACTGATTTCTATATTCCTTGCAATGCATAAAATGTTTTCCTGCTGTTGAGCCAAGAGTTTCATGGGCCCACATATGTTCTCAAATCACCTTTAACAATGTAGACGAAAATGTGAAATCAATTTTTTGCATTTCTTCTATCTCGACACTTGTAGTACATTATAAATTTTTGGATATTACATGAGCTGTTTCTCGTGTCACCTTTTATCGTTATAATTGTACATTATGTTCTTTTCTAGGGGACACTGGTATTGCAAATAGAAGAGTATTAAGCTACATATGATATGCTTGTTATAATCATCGCAAGTTTATTTATGGATTTTAGTAGGCCATTCCATGATGAGCCTGGACTTTGGCTTGAGAAGATCTGTCCAAATGAAGAGAACACAACATCCATAAGCCTTGTTCCGTATGATTGTTTGATCAAAGCAGTCATGACAAGTGGCCAAGCTGTGTAATACTGTGTAGTCTTCCCTGTTGACGGGGGCAGAGACAGCCCGCGCAATCACATGAGGTTATGTGGAAAATGGCCTGTTTGCTTCGTATTCTATGGCTATTTTTGGTCAACTAGCAGAGATTTCTGGGAAACTTTGATCTCCTTGTCCTCATTTGGTAATGCTTATGCAATTTTTAAGGTTTGGTATGGTTCTGCATATTATCTGATGACTCTTATGAATGAAACTCCTATTGGTACTTAAAACATGTGATTTTCCCCCAGATTTTAGCTGGGCAAGAACAAGAAAGCGAAGAACCAGGTCAGTTGTAGCTTCTTTGATCATACCGGACTGTCCCCATCCTTTCCCAAAGATATAGAAACTCAGATATTAGATATGAACACATGTTTTTATGCTTTTTCTTTGCGTTGTGGGGTTAATGGTTTTGTAAGTTGTGTTTTTGCTGTGTAATCTCAGACAAGCAATCAGACACGAGAAATCTCAGAATTGGAATTGCAACTTACATGGCTAAAACAATTCTGGAAAAATTTGACCCCGTTTCTCAGACGGAGTATGAAAAAGAAAGACTTCACTGA mRNA sequence ATGGCGCCATGGCACGTGTCGTGTCTGCTTGGCCTTGGGGGTAGGCCATTCCATGATGAGCCTGGACTTTGGCTTGAGAAGATCTGTCCAAATGAAGAGAACACAACATCCATAAGCCTTGTTCCGTATGATTGTTTGATCAAAGCAGTCATGACAAGTGGCCAAGCTGTAGATTTCTGGGAAACTTTGATCTCCTTGTCCTCATTTGGTAATGCTTATGCAATTTTTAAGGTTTGGTATGGTTCTGCATATTATCTGATGACTCTTATGAATGAAACTCCTATTGACAAGCAATCAGACACGAGAAATCTCAGAATTGGAATTGCAACTTACATGGCTAAAACAATTCTGGAAAAATTTGACCCCGTTTCTCAGACGGAGTATGAAAAAGAAAGACTTCACTGA Coding sequence (CDS) ATGGCGCCATGGCACGTGTCGTGTCTGCTTGGCCTTGGGGGTAGGCCATTCCATGATGAGCCTGGACTTTGGCTTGAGAAGATCTGTCCAAATGAAGAGAACACAACATCCATAAGCCTTGTTCCGTATGATTGTTTGATCAAAGCAGTCATGACAAGTGGCCAAGCTGTAGATTTCTGGGAAACTTTGATCTCCTTGTCCTCATTTGGTAATGCTTATGCAATTTTTAAGGTTTGGTATGGTTCTGCATATTATCTGATGACTCTTATGAATGAAACTCCTATTGACAAGCAATCAGACACGAGAAATCTCAGAATTGGAATTGCAACTTACATGGCTAAAACAATTCTGGAAAAATTTGACCCCGTTTCTCAGACGGAGTATGAAAAAGAAAGACTTCACTGA Protein sequence MAPWHVSCLLGLGGRPFHDEPGLWLEKICPNEENTTSISLVPYDCLIKAVMTSGQAVDFWETLISLSSFGNAYAIFKVWYGSAYYLMTLMNETPIDKQSDTRNLRIGIATYMAKTILEKFDPVSQTEYEKERLH
Homology
BLAST of Csor.00g101190 vs. NCBI nr
Match: KAG6570818.1 (hypothetical protein SDJN03_29733, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 283 bits (724), Expect = 1.99e-96 Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0 Query: 1 MAPWHVSCLLGLGGRPFHDEPGLWLEKICPNEENTTSISLVPYDCLIKAVMTSGQAVDFW 60 MAPWHVSCLLGLGGRPFHDEPGLWLEKICPNEENTTSISLVPYDCLIKAVMTSGQAVDFW Sbjct: 1 MAPWHVSCLLGLGGRPFHDEPGLWLEKICPNEENTTSISLVPYDCLIKAVMTSGQAVDFW 60
Query: 61 ETLISLSSFGNAYAIFKVWYGSAYYLMTLMNETPIDKQSDTRNLRIGIATYMAKTILEKF 120 ETLISLSSFGNAYAIFKVWYGSAYYLMTLMNETPIDKQSDTRNLRIGIATYMAKTILEKF Sbjct: 61 ETLISLSSFGNAYAIFKVWYGSAYYLMTLMNETPIDKQSDTRNLRIGIATYMAKTILEKF 120
Query: 121 DPVSQTEYEKERLH 134 DPVSQTEYEKERLH Sbjct: 121 DPVSQTEYEKERLH 134
BLAST of Csor.00g101190 vs. NCBI nr
Match: KAG7010660.1 (hypothetical protein SDJN02_27455, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 82.0 bits (201), Expect = 1.16e-17 Identity = 41/44 (93.18%), Postives = 42/44 (95.45%), Query Frame = 0 Query: 91 NETPIDKQSDTRNLRIGIATYMAKTILEKFDPVSQTEYEKERLH 134 +E P DKQSDTRNLRIGIATYMAKTILEKFDPVSQTEYEKERLH Sbjct: 26 SEEP-DKQSDTRNLRIGIATYMAKTILEKFDPVSQTEYEKERLH 68
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6570818.1 | 1.99e-96 | 100.00 | hypothetical protein SDJN03_29733, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7010660.1 | 1.16e-17 | 93.18 | hypothetical protein SDJN02_27455, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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