Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACTTACCTAATTCACCCTCTGACCAAGAAATTCTCCGGCCGCCACCGTTATCAACACCCACTTCCTCTTCAGCCTCGAAATCGCCGCTCCTTCCTCATTCTCCCTCACCGGATCCCCCTACTTCCTTTTCTCCTTCATCGCCGCCGTCGCCGCCGCAATCCGTTCCTTGCCTTTCCAACAACGTCGTCGTCGTCGGTTTCATTGGGAGGAGACCTAATAATTCGATTCAACTCATCAATCGGGTTATCGATTACAATGTTTTTGGATCCGGTAAATTGGATGCGAAAGAGGAAGTTGAACAATGGTTCAAGCGGCGACGAATTAGTTACTATCACGAGGAGGAAAGAGGCATTCTGTTTTTGCAGTTTGCTTCCCACAGAGGCTCCGTGTTCGAGGCGAAAACCGATTATGATTCGGAGATTCAAGAACATGAGTTTGGCGATCTTTAG
mRNA sequence
ATGGACTTACCTAATTCACCCTCTGACCAAGAAATTCTCCGGCCGCCACCGTTATCAACACCCACTTCCTCTTCAGCCTCGAAATCGCCGCTCCTTCCTCATTCTCCCTCACCGGATCCCCCTACTTCCTTTTCTCCTTCATCGCCGCCGTCGCCGCCGCAATCCGTTCCTTGCCTTTCCAACAACGTCGTCGTCGTCGGTTTCATTGGGAGGAGACCTAATAATTCGATTCAACTCATCAATCGGGTTATCGATTACAATGTTTTTGGATCCGGTAAATTGGATGCGAAAGAGGAAGTTGAACAATGGTTCAAGCGGCGACGAATTAGTTACTATCACGAGGAGGAAAGAGGCATTCTGTTTTTGCAGTTTGCTTCCCACAGAGGCTCCGTGTTCGAGGCGAAAACCGATTATGATTCGGAGATTCAAGAACATGAGTTTGGCGATCTTTAG
Coding sequence (CDS)
ATGGACTTACCTAATTCACCCTCTGACCAAGAAATTCTCCGGCCGCCACCGTTATCAACACCCACTTCCTCTTCAGCCTCGAAATCGCCGCTCCTTCCTCATTCTCCCTCACCGGATCCCCCTACTTCCTTTTCTCCTTCATCGCCGCCGTCGCCGCCGCAATCCGTTCCTTGCCTTTCCAACAACGTCGTCGTCGTCGGTTTCATTGGGAGGAGACCTAATAATTCGATTCAACTCATCAATCGGGTTATCGATTACAATGTTTTTGGATCCGGTAAATTGGATGCGAAAGAGGAAGTTGAACAATGGTTCAAGCGGCGACGAATTAGTTACTATCACGAGGAGGAAAGAGGCATTCTGTTTTTGCAGTTTGCTTCCCACAGAGGCTCCGTGTTCGAGGCGAAAACCGATTATGATTCGGAGATTCAAGAACATGAGTTTGGCGATCTTTAG
Protein sequence
MDLPNSPSDQEILRPPPLSTPTSSSASKSPLLPHSPSPDPPTSFSPSSPPSPPQSVPCLSNNVVVVGFIGRRPNNSIQLINRVIDYNVFGSGKLDAKEEVEQWFKRRRISYYHEEERGILFLQFASHRGSVFEAKTDYDSEIQEHEFGDL
Homology
BLAST of Csor.00g101120 vs. NCBI nr
Match:
KAG6570824.1 (hypothetical protein SDJN03_29739, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 291 bits (746), Expect = 2.93e-99
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0
Query: 1 MDLPNSPSDQEILRPPPLSTPTSSSASKSPLLPHSPSPDPPTSFSPSSPPSPPQSVPCLS 60
MDLPNSPSDQEILRPPPLSTPTSSSASKSPLLPHSPSPDPPTSFSPSSPPSPPQSVPCLS
Sbjct: 1 MDLPNSPSDQEILRPPPLSTPTSSSASKSPLLPHSPSPDPPTSFSPSSPPSPPQSVPCLS 60
Query: 61 NNVVVVGFIGRRPNNSIQLINRVIDYNVFGSGKLDAKEEVEQWFKRRRISYYHEEERGIL 120
NNVVVVGFIGRRPNNSIQLINRVIDYNVFGSGKLDAKEEVEQWFKRRRISYYHEEERGIL
Sbjct: 61 NNVVVVGFIGRRPNNSIQLINRVIDYNVFGSGKLDAKEEVEQWFKRRRISYYHEEERGIL 120
Query: 121 FLQFASHRGSVFEAKTDYDSEIQEHEFGDL 150
FLQFASHRGSVFEAKTDYDSEIQEHEFGDL
Sbjct: 121 FLQFASHRGSVFEAKTDYDSEIQEHEFGDL 150
BLAST of Csor.00g101120 vs. NCBI nr
Match:
XP_023513369.1 (protein smg8-like isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 252 bits (644), Expect = 4.45e-76
Identity = 139/156 (89.10%), Postives = 144/156 (92.31%), Query Frame = 0
Query: 1 MDLPNSPSDQEILRPPPLSTPTSSSASKSPLLP-HSPSPDPPTSFSPSSPPSPPQSVPCL 60
MDLPNS SDQEILRPPPLST TSSSAS++P LP HS SPDPPTSFSPSSP S PQSVPCL
Sbjct: 1 MDLPNSSSDQEILRPPPLSTLTSSSASQTPPLPPHSASPDPPTSFSPSSP-SQPQSVPCL 60
Query: 61 SNNVVVVGFIGRRPNNSIQLINRVIDYNVFGSGKLD-----AKEEVEQWFKRRRISYYHE 120
SNNVVVVGFIGRRPNNSIQLINR+ID+NVFGSGKLD AKEEVEQWFKRRRISYYHE
Sbjct: 61 SNNVVVVGFIGRRPNNSIQLINRIIDHNVFGSGKLDTKLVVAKEEVEQWFKRRRISYYHE 120
Query: 121 EERGILFLQFASHRGSVFEAKTDYDSEIQEHEFGDL 150
EERGILFLQF+SHRGSVFEAKTDYDSEIQEHEFGDL
Sbjct: 121 EERGILFLQFSSHRGSVFEAKTDYDSEIQEHEFGDL 155
BLAST of Csor.00g101120 vs. NCBI nr
Match:
KAA0037304.1 (DUF2146 domain-containing protein [Cucumis melo var. makuwa] >TYK24181.1 DUF2146 domain-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 199 bits (507), Expect = 5.19e-56
Identity = 115/157 (73.25%), Postives = 130/157 (82.80%), Query Frame = 0
Query: 1 MDLPNSPSDQEILRPPPLSTPTSSSASKSP--LLPHSPSPDPPTSFSPSSPPSPPQSVPC 60
MD+PNS S + ++RPPPLSTPTSSS+S SP L PHS P+P TSFSPSSP SP S+P
Sbjct: 1 MDVPNSSSVRVLIRPPPLSTPTSSSSSPSPTPLPPHSALPEPSTSFSPSSP-SP--SLPR 60
Query: 61 LSNNVVVVGFIGRRPNNSIQLINRVIDYNVFGSGKLDAK-----EEVEQWFKRRRISYYH 120
S+ VVVVGFIGRRP++SIQLINRVID NVFGSGKLD K EEV +WFKRRRISYYH
Sbjct: 61 FSDTVVVVGFIGRRPDDSIQLINRVIDSNVFGSGKLDKKLDVEKEEVREWFKRRRISYYH 120
Query: 121 EEERGILFLQFASHRGSVFEAKTDYDSEIQEHEFGDL 150
EEERGILFLQF+SHR SVF+A+ YDSEIQEH+FGDL
Sbjct: 121 EEERGILFLQFSSHRSSVFDAEAGYDSEIQEHDFGDL 154
BLAST of Csor.00g101120 vs. NCBI nr
Match:
XP_031743807.1 (uncharacterized protein LOC105435794 isoform X2 [Cucumis sativus])
HSP 1 Score: 199 bits (507), Expect = 5.32e-56
Identity = 113/157 (71.97%), Postives = 128/157 (81.53%), Query Frame = 0
Query: 1 MDLPNSPSDQEILRPPPLSTPTSSSASKSP--LLPHSPSPDPPTSFSPSSPPSPPQSVPC 60
MD+PNS S + ++RPPPLSTPTSSS+S SP L PHS SP+P TSF PSSP S+P
Sbjct: 1 MDVPNSSSVRVLIRPPPLSTPTSSSSSPSPTPLPPHSASPEPSTSFPPSSPLP---SLPR 60
Query: 61 LSNNVVVVGFIGRRPNNSIQLINRVIDYNVFGSGKLDAK-----EEVEQWFKRRRISYYH 120
S+ VVVVGFIGRRP++SIQLINRVID NVFGSGKLD K EEV +WFKRRRISYYH
Sbjct: 61 FSDTVVVVGFIGRRPDDSIQLINRVIDSNVFGSGKLDKKLDVEKEEVREWFKRRRISYYH 120
Query: 121 EEERGILFLQFASHRGSVFEAKTDYDSEIQEHEFGDL 150
EEERGILFLQF+SHR SVF+ + DYDSEIQEH+FGDL
Sbjct: 121 EEERGILFLQFSSHRSSVFDVEADYDSEIQEHDFGDL 154
BLAST of Csor.00g101120 vs. NCBI nr
Match:
XP_016903384.1 (PREDICTED: uncharacterized protein LOC103503038 isoform X2 [Cucumis melo])
HSP 1 Score: 199 bits (507), Expect = 5.32e-56
Identity = 115/157 (73.25%), Postives = 130/157 (82.80%), Query Frame = 0
Query: 1 MDLPNSPSDQEILRPPPLSTPTSSSASKSP--LLPHSPSPDPPTSFSPSSPPSPPQSVPC 60
MD+PNS S + ++RPPPLSTPTSSS+S SP L PHS P+P TSFSPSSP SP S+P
Sbjct: 1 MDVPNSSSVRVLIRPPPLSTPTSSSSSPSPTPLPPHSALPEPSTSFSPSSP-SP--SLPR 60
Query: 61 LSNNVVVVGFIGRRPNNSIQLINRVIDYNVFGSGKLDAK-----EEVEQWFKRRRISYYH 120
S+ VVVVGFIGRRP++SIQLINRVID NVFGSGKLD K EEV +WFKRRRISYYH
Sbjct: 61 FSDTVVVVGFIGRRPDDSIQLINRVIDSNVFGSGKLDKKLDVEKEEVREWFKRRRISYYH 120
Query: 121 EEERGILFLQFASHRGSVFEAKTDYDSEIQEHEFGDL 150
EEERGILFLQF+SHR SVF+A+ YDSEIQEH+FGDL
Sbjct: 121 EEERGILFLQFSSHRSSVFDAEAGYDSEIQEHDFGDL 154
BLAST of Csor.00g101120 vs. ExPASy TrEMBL
Match:
A0A5A7T1F3 (DUF2146 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1754G00130 PE=3 SV=1)
HSP 1 Score: 199 bits (507), Expect = 2.51e-56
Identity = 115/157 (73.25%), Postives = 130/157 (82.80%), Query Frame = 0
Query: 1 MDLPNSPSDQEILRPPPLSTPTSSSASKSP--LLPHSPSPDPPTSFSPSSPPSPPQSVPC 60
MD+PNS S + ++RPPPLSTPTSSS+S SP L PHS P+P TSFSPSSP SP S+P
Sbjct: 1 MDVPNSSSVRVLIRPPPLSTPTSSSSSPSPTPLPPHSALPEPSTSFSPSSP-SP--SLPR 60
Query: 61 LSNNVVVVGFIGRRPNNSIQLINRVIDYNVFGSGKLDAK-----EEVEQWFKRRRISYYH 120
S+ VVVVGFIGRRP++SIQLINRVID NVFGSGKLD K EEV +WFKRRRISYYH
Sbjct: 61 FSDTVVVVGFIGRRPDDSIQLINRVIDSNVFGSGKLDKKLDVEKEEVREWFKRRRISYYH 120
Query: 121 EEERGILFLQFASHRGSVFEAKTDYDSEIQEHEFGDL 150
EEERGILFLQF+SHR SVF+A+ YDSEIQEH+FGDL
Sbjct: 121 EEERGILFLQFSSHRSSVFDAEAGYDSEIQEHDFGDL 154
BLAST of Csor.00g101120 vs. ExPASy TrEMBL
Match:
A0A1S4E583 (uncharacterized protein LOC103503038 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503038 PE=3 SV=1)
HSP 1 Score: 199 bits (507), Expect = 2.58e-56
Identity = 115/157 (73.25%), Postives = 130/157 (82.80%), Query Frame = 0
Query: 1 MDLPNSPSDQEILRPPPLSTPTSSSASKSP--LLPHSPSPDPPTSFSPSSPPSPPQSVPC 60
MD+PNS S + ++RPPPLSTPTSSS+S SP L PHS P+P TSFSPSSP SP S+P
Sbjct: 1 MDVPNSSSVRVLIRPPPLSTPTSSSSSPSPTPLPPHSALPEPSTSFSPSSP-SP--SLPR 60
Query: 61 LSNNVVVVGFIGRRPNNSIQLINRVIDYNVFGSGKLDAK-----EEVEQWFKRRRISYYH 120
S+ VVVVGFIGRRP++SIQLINRVID NVFGSGKLD K EEV +WFKRRRISYYH
Sbjct: 61 FSDTVVVVGFIGRRPDDSIQLINRVIDSNVFGSGKLDKKLDVEKEEVREWFKRRRISYYH 120
Query: 121 EEERGILFLQFASHRGSVFEAKTDYDSEIQEHEFGDL 150
EEERGILFLQF+SHR SVF+A+ YDSEIQEH+FGDL
Sbjct: 121 EEERGILFLQFSSHRSSVFDAEAGYDSEIQEHDFGDL 154
BLAST of Csor.00g101120 vs. ExPASy TrEMBL
Match:
A0A0A0KGK1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G148270 PE=3 SV=1)
HSP 1 Score: 199 bits (507), Expect = 2.59e-56
Identity = 113/157 (71.97%), Postives = 128/157 (81.53%), Query Frame = 0
Query: 1 MDLPNSPSDQEILRPPPLSTPTSSSASKSP--LLPHSPSPDPPTSFSPSSPPSPPQSVPC 60
MD+PNS S + ++RPPPLSTPTSSS+S SP L PHS SP+P TSF PSSP S+P
Sbjct: 1 MDVPNSSSVRVLIRPPPLSTPTSSSSSPSPTPLPPHSASPEPSTSFPPSSPLP---SLPR 60
Query: 61 LSNNVVVVGFIGRRPNNSIQLINRVIDYNVFGSGKLDAK-----EEVEQWFKRRRISYYH 120
S+ VVVVGFIGRRP++SIQLINRVID NVFGSGKLD K EEV +WFKRRRISYYH
Sbjct: 61 FSDTVVVVGFIGRRPDDSIQLINRVIDSNVFGSGKLDKKLDVEKEEVREWFKRRRISYYH 120
Query: 121 EEERGILFLQFASHRGSVFEAKTDYDSEIQEHEFGDL 150
EEERGILFLQF+SHR SVF+ + DYDSEIQEH+FGDL
Sbjct: 121 EEERGILFLQFSSHRSSVFDVEADYDSEIQEHDFGDL 154
BLAST of Csor.00g101120 vs. ExPASy TrEMBL
Match:
A0A1S3CNU9 (uncharacterized protein LOC103503038 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503038 PE=3 SV=1)
HSP 1 Score: 199 bits (507), Expect = 2.59e-56
Identity = 115/157 (73.25%), Postives = 130/157 (82.80%), Query Frame = 0
Query: 1 MDLPNSPSDQEILRPPPLSTPTSSSASKSP--LLPHSPSPDPPTSFSPSSPPSPPQSVPC 60
MD+PNS S + ++RPPPLSTPTSSS+S SP L PHS P+P TSFSPSSP SP S+P
Sbjct: 1 MDVPNSSSVRVLIRPPPLSTPTSSSSSPSPTPLPPHSALPEPSTSFSPSSP-SP--SLPR 60
Query: 61 LSNNVVVVGFIGRRPNNSIQLINRVIDYNVFGSGKLDAK-----EEVEQWFKRRRISYYH 120
S+ VVVVGFIGRRP++SIQLINRVID NVFGSGKLD K EEV +WFKRRRISYYH
Sbjct: 61 FSDTVVVVGFIGRRPDDSIQLINRVIDSNVFGSGKLDKKLDVEKEEVREWFKRRRISYYH 120
Query: 121 EEERGILFLQFASHRGSVFEAKTDYDSEIQEHEFGDL 150
EEERGILFLQF+SHR SVF+A+ YDSEIQEH+FGDL
Sbjct: 121 EEERGILFLQFSSHRSSVFDAEAGYDSEIQEHDFGDL 154
BLAST of Csor.00g101120 vs. ExPASy TrEMBL
Match:
A0A6J1JZU3 (uncharacterized protein LOC111491186 OS=Cucurbita maxima OX=3661 GN=LOC111491186 PE=3 SV=1)
HSP 1 Score: 197 bits (500), Expect = 2.28e-55
Identity = 109/155 (70.32%), Postives = 128/155 (82.58%), Query Frame = 0
Query: 1 MDLPNSPSDQEILRPPPLSTPTSSSASKSPLLPHSPSPDPPTSFSPSSPPSPPQSVPCLS 60
MD+ NS S + ++RPPP+STPTSSSAS++PL + SPDP TS +PSSP SP SVP S
Sbjct: 1 MDMSNSSSVRVLVRPPPISTPTSSSASQTPLPSRTASPDPSTSLAPSSP-SPSLSVPRFS 60
Query: 61 NNVVVVGFIGRRPNNSIQLINRVIDYNVFGSGKLDAK-----EEVEQWFKRRRISYYHEE 120
+ +VVVGFIGRRP++SIQLINRVID NVFGSGKLD K EEV WFKRRRISY+HEE
Sbjct: 61 DGIVVVGFIGRRPDDSIQLINRVIDSNVFGSGKLDKKLDVEKEEVRDWFKRRRISYHHEE 120
Query: 121 ERGILFLQFASHRGSVFEAKTDYDSEIQEHEFGDL 150
ERGILFLQF+SHRGSVF+A+ DYDS I+EH+FGDL
Sbjct: 121 ERGILFLQFSSHRGSVFDAEIDYDSAIEEHDFGDL 154
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6570824.1 | 2.93e-99 | 100.00 | hypothetical protein SDJN03_29739, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_023513369.1 | 4.45e-76 | 89.10 | protein smg8-like isoform X1 [Cucurbita pepo subsp. pepo] | [more] |
KAA0037304.1 | 5.19e-56 | 73.25 | DUF2146 domain-containing protein [Cucumis melo var. makuwa] >TYK24181.1 DUF2146... | [more] |
XP_031743807.1 | 5.32e-56 | 71.97 | uncharacterized protein LOC105435794 isoform X2 [Cucumis sativus] | [more] |
XP_016903384.1 | 5.32e-56 | 73.25 | PREDICTED: uncharacterized protein LOC103503038 isoform X2 [Cucumis melo] | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7T1F3 | 2.51e-56 | 73.25 | DUF2146 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A1S4E583 | 2.58e-56 | 73.25 | uncharacterized protein LOC103503038 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A0A0KGK1 | 2.59e-56 | 71.97 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G148270 PE=3 SV=1 | [more] |
A0A1S3CNU9 | 2.59e-56 | 73.25 | uncharacterized protein LOC103503038 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A6J1JZU3 | 2.28e-55 | 70.32 | uncharacterized protein LOC111491186 OS=Cucurbita maxima OX=3661 GN=LOC111491186... | [more] |
Match Name | E-value | Identity | Description | |