Csor.00g101060 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCCCCTTACACATCTGCAGAACAAGAACAAGAACAAGAGCACAACAGGCAGAGTGAAGGTCAAGCGGGTTCTGTTGAGAGCCATTCGCTTGCTTTGCCTGTGCCACCTACATTGCCCTCTCGGCAACTTTGGGATCATGAGTTGAGCAATGGGAGTTGGCCACGACGTGATTTCCATCAACAATTTGGAGCTGTATGTCTCTTCAAGGTTCCCTTGTCTTTTTAGTTGAAGTCGATGCAAAGTAAATAAATAAAAATAGTAAAACATGGAAATGTAAATGGTGAAGTAGGATGCAAAGTAGTAAAACATGGAAATGTAAATGGTTATGAATGGTGATTCTGTAATACTATTTAAAATTATTGCAATTTACTTCCAGCTAAAGTTACTGTGATTTTTGTATCATGATTATCTTTTTTTACTTAAACTTGTTGCTGAATTTTACAGGATTGGGACATCGTTAACGATTTGAGGATTGACATGTCAAGACTGCAACAGAGGATGGGCAACCTACAGAGAATGTTGGAGACATGCATGGATATGCAACTCGAGCTGCAGCGCTCAATAAAGCAAGAAGTTTCTTCTGCATTGAACCGAGCAGCTGGTTCAGAAGGTTTGTCTTCATTTTTAATGCCGTTGAATTCTTTAGTTTATACAATTTAGCTGGTTCAGAAGAACACACTATGCCTCTATGAAAACCGTTCTTAGTTTGCAGAGTTGATATATCTTAAATCTTTAGTGATTTTAGTAGTTTCTCTGTTTTTTTGGTGTTGGATATTATATTTTTCCAAAATTATTTGTGGATATAAGATTTAGAATTTTATTTCTAAATGTGATTCCTGCCCTGGACCAATGAAATGATATGATATACTCTTGCATGTCATCGATTGATTGCATTTCACCTGCACAGAGATGTTTGAAGACAGTTTGCCAGATGATGAACCCAAATGGGATCGAGTAAGGAAGGGAATTTGTATATGTTGCGATAACCATATTGATGCTTTGTTGTACAGGTAATTCCAGCAAACTTTCAGTCTATTTTTGTGTGTTTTTTTGGTCCCAAGTTTCACTTCAACTTTATATTTTCTCTCATTTCCAACTTGTAGATGTGGGCACATGTGCACATGTTCAAAATGTGCTAACGAGTTGGTCGAGGCTCGAGGAAAGTGTCCAATGTGTTGTGCGCCCATACTAGAAGTGATTCGGGCTTACTCCCTGTGA ATGCCCCCTTACACATCTGCAGAACAAGAACAAGAACAAGAGCACAACAGGCAGAGTGAAGGTCAAGCGGGTTCTGTTGAGAGCCATTCGCTTGCTTTGCCTGTGCCACCTACATTGCCCTCTCGGCAACTTTGGGATCATGAGTTGAGCAATGGGAGTTGGCCACGACGTGATTTCCATCAACAATTTGGAGCTGATTGGGACATCGTTAACGATTTGAGGATTGACATGTCAAGACTGCAACAGAGGATGGGCAACCTACAGAGAATGTTGGAGACATGCATGGATATGCAACTCGAGCTGCAGCGCTCAATAAAGCAAGAAGTTTCTTCTGCATTGAACCGAGCAGCTGGTTCAGAAGAGATGTTTGAAGACAGTTTGCCAGATGATGAACCCAAATGGGATCGAGTAAGGAAGGGAATTTGTATATGTTGCGATAACCATATTGATGCTTTGTTGTACAGATGTGGGCACATGTGCACATGTTCAAAATGTGCTAACGAGTTGGTCGAGGCTCGAGGAAAGTGTCCAATGTGTTGTGCGCCCATACTAGAAGTGATTCGGGCTTACTCCCTGTGA ATGCCCCCTTACACATCTGCAGAACAAGAACAAGAACAAGAGCACAACAGGCAGAGTGAAGGTCAAGCGGGTTCTGTTGAGAGCCATTCGCTTGCTTTGCCTGTGCCACCTACATTGCCCTCTCGGCAACTTTGGGATCATGAGTTGAGCAATGGGAGTTGGCCACGACGTGATTTCCATCAACAATTTGGAGCTGATTGGGACATCGTTAACGATTTGAGGATTGACATGTCAAGACTGCAACAGAGGATGGGCAACCTACAGAGAATGTTGGAGACATGCATGGATATGCAACTCGAGCTGCAGCGCTCAATAAAGCAAGAAGTTTCTTCTGCATTGAACCGAGCAGCTGGTTCAGAAGAGATGTTTGAAGACAGTTTGCCAGATGATGAACCCAAATGGGATCGAGTAAGGAAGGGAATTTGTATATGTTGCGATAACCATATTGATGCTTTGTTGTACAGATGTGGGCACATGTGCACATGTTCAAAATGTGCTAACGAGTTGGTCGAGGCTCGAGGAAAGTGTCCAATGTGTTGTGCGCCCATACTAGAAGTGATTCGGGCTTACTCCCTGTGA MPPYTSAEQEQEQEHNRQSEGQAGSVESHSLALPVPPTLPSRQLWDHELSNGSWPRRDFHQQFGADWDIVNDLRIDMSRLQQRMGNLQRMLETCMDMQLELQRSIKQEVSSALNRAAGSEEMFEDSLPDDEPKWDRVRKGICICCDNHIDALLYRCGHMCTCSKCANELVEARGKCPMCCAPILEVIRAYSL Homology
BLAST of Csor.00g101060 vs. ExPASy Swiss-Prot
Match: P29503 (Protein neuralized OS=Drosophila melanogaster OX=7227 GN=neur PE=1 SV=2) HSP 1 Score: 59.7 bits (143), Expect = 4.2e-08 Identity = 35/89 (39.33%), Postives = 50/89 (56.18%), Query Frame = 0
BLAST of Csor.00g101060 vs. ExPASy Swiss-Prot
Match: A8MQ27 (E3 ubiquitin-protein ligase NEURL1B OS=Homo sapiens OX=9606 GN=NEURL1B PE=1 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.0e-06 Identity = 24/56 (42.86%), Postives = 34/56 (60.71%), Query Frame = 0
BLAST of Csor.00g101060 vs. ExPASy Swiss-Prot
Match: Q24746 (Protein neuralized OS=Drosophila virilis OX=7244 GN=neur PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.8e-06 Identity = 30/71 (42.25%), Postives = 40/71 (56.34%), Query Frame = 0
BLAST of Csor.00g101060 vs. ExPASy Swiss-Prot
Match: Q0MW30 (E3 ubiquitin-protein ligase NEURL1B OS=Mus musculus OX=10090 GN=Neurl1b PE=1 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 2.3e-06 Identity = 25/55 (45.45%), Postives = 34/55 (61.82%), Query Frame = 0
BLAST of Csor.00g101060 vs. ExPASy Swiss-Prot
Match: Q923S6 (E3 ubiquitin-protein ligase NEURL1 OS=Mus musculus OX=10090 GN=Neurl1 PE=1 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 9.7e-05 Identity = 20/49 (40.82%), Postives = 30/49 (61.22%), Query Frame = 0
BLAST of Csor.00g101060 vs. NCBI nr
Match: KAG6570830.1 (Protein neuralized, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 398 bits (1023), Expect = 4.05e-140 Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0
BLAST of Csor.00g101060 vs. NCBI nr
Match: XP_022944250.1 (uncharacterized protein LOC111448758 [Cucurbita moschata] >XP_022944251.1 uncharacterized protein LOC111448758 [Cucurbita moschata] >XP_022944253.1 uncharacterized protein LOC111448758 [Cucurbita moschata] >XP_022944254.1 uncharacterized protein LOC111448758 [Cucurbita moschata]) HSP 1 Score: 383 bits (984), Expect = 1.73e-125 Identity = 189/193 (97.93%), Postives = 189/193 (97.93%), Query Frame = 0
BLAST of Csor.00g101060 vs. NCBI nr
Match: XP_023512646.1 (uncharacterized protein LOC111777337 [Cucurbita pepo subsp. pepo] >XP_023512647.1 uncharacterized protein LOC111777337 [Cucurbita pepo subsp. pepo] >XP_023512648.1 uncharacterized protein LOC111777337 [Cucurbita pepo subsp. pepo] >XP_023512649.1 uncharacterized protein LOC111777337 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 382 bits (981), Expect = 4.86e-125 Identity = 188/193 (97.41%), Postives = 189/193 (97.93%), Query Frame = 0
BLAST of Csor.00g101060 vs. NCBI nr
Match: KAG7010673.1 (Protein neuralized, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 380 bits (975), Expect = 3.82e-124 Identity = 188/193 (97.41%), Postives = 188/193 (97.41%), Query Frame = 0
BLAST of Csor.00g101060 vs. NCBI nr
Match: XP_022986254.1 (uncharacterized protein LOC111484063 [Cucurbita maxima] >XP_022986255.1 uncharacterized protein LOC111484063 [Cucurbita maxima] >XP_022986256.1 uncharacterized protein LOC111484063 [Cucurbita maxima] >XP_022986257.1 uncharacterized protein LOC111484063 [Cucurbita maxima]) HSP 1 Score: 373 bits (957), Expect = 1.84e-121 Identity = 183/193 (94.82%), Postives = 187/193 (96.89%), Query Frame = 0
BLAST of Csor.00g101060 vs. ExPASy TrEMBL
Match: A0A6J1FXV7 (uncharacterized protein LOC111448758 OS=Cucurbita moschata OX=3662 GN=LOC111448758 PE=4 SV=1) HSP 1 Score: 383 bits (984), Expect = 8.40e-126 Identity = 189/193 (97.93%), Postives = 189/193 (97.93%), Query Frame = 0
BLAST of Csor.00g101060 vs. ExPASy TrEMBL
Match: A0A6J1JDJ8 (uncharacterized protein LOC111484063 OS=Cucurbita maxima OX=3661 GN=LOC111484063 PE=4 SV=1) HSP 1 Score: 373 bits (957), Expect = 8.92e-122 Identity = 183/193 (94.82%), Postives = 187/193 (96.89%), Query Frame = 0
BLAST of Csor.00g101060 vs. ExPASy TrEMBL
Match: A0A0A0KDG6 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G149350 PE=4 SV=1) HSP 1 Score: 361 bits (927), Expect = 2.61e-117 Identity = 179/193 (92.75%), Postives = 185/193 (95.85%), Query Frame = 0
BLAST of Csor.00g101060 vs. ExPASy TrEMBL
Match: A0A1S3CQC3 (uncharacterized protein LOC103503044 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103503044 PE=4 SV=1) HSP 1 Score: 358 bits (920), Expect = 2.23e-116 Identity = 180/195 (92.31%), Postives = 186/195 (95.38%), Query Frame = 0
BLAST of Csor.00g101060 vs. ExPASy TrEMBL
Match: A0A5D3DKX2 (Ring/U-Box superfamily protein, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1754G00220 PE=4 SV=1) HSP 1 Score: 358 bits (920), Expect = 3.07e-116 Identity = 180/195 (92.31%), Postives = 186/195 (95.38%), Query Frame = 0
BLAST of Csor.00g101060 vs. TAIR 10
Match: AT2G27950.1 (Ring/U-Box superfamily protein ) HSP 1 Score: 213.4 bits (542), Expect = 1.6e-55 Identity = 108/191 (56.54%), Postives = 141/191 (73.82%), Query Frame = 0
BLAST of Csor.00g101060 vs. TAIR 10
Match: AT5G04460.1 (RING/U-box superfamily protein ) HSP 1 Score: 201.4 bits (511), Expect = 6.4e-52 Identity = 101/188 (53.72%), Postives = 134/188 (71.28%), Query Frame = 0
BLAST of Csor.00g101060 vs. TAIR 10
Match: AT5G04460.3 (RING/U-box superfamily protein ) HSP 1 Score: 201.4 bits (511), Expect = 6.4e-52 Identity = 101/188 (53.72%), Postives = 134/188 (71.28%), Query Frame = 0
BLAST of Csor.00g101060 vs. TAIR 10
Match: AT5G04460.2 (RING/U-box superfamily protein ) HSP 1 Score: 136.3 bits (342), Expect = 2.5e-32 Identity = 71/151 (47.02%), Postives = 101/151 (66.89%), Query Frame = 0
BLAST of Csor.00g101060 vs. TAIR 10
Match: AT1G30860.1 (RING/U-box superfamily protein ) HSP 1 Score: 78.6 bits (192), Expect = 6.2e-15 Identity = 40/123 (32.52%), Postives = 66/123 (53.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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