Csor.00g100910 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAATTTCAGCGTAATTTCGCGAATAACGACGATTGGTCTGGAGGCACTGCCACATGGATTGGACCTTCACACGTCAGCAACCACGTGTCTTTTTCCGTTTCATTTTTTAACACGAAATTAAAATGTTAATAACCAATTATCCATAAAATTTAATTTAATTTATTTAATTTTGTCATTATTTTCAGTTATAAAGTTGTGTACGCTAATACTTCATTAAAAATGTCGGTAAAGTGGTGAGTTTCTTCATAATTATCGGGAGATATTTATGAATATAAATTTAATTTATTAATCGAGATGCAAATAGTGAATTGAAGACGTTGGTCGGGTGGAATTTGGTGTTTGTGTTTGTGTTGTGTGGTTGTCTAGGGAAGGCATAACTTATGTGTGTGGGCCAACCAATACCATTTGACACGTCATCGAATATTGTCTCGGGCTTCGAGTCAATTTTTATATTATTATAAAAGCGTATAAAAATTACTTTACATAGTTTAGGTTATCTTGGACAATATAATCTTAAAAGATCAGAATGTATGAGGTAGAAGATTCAAATCTGTTCCGGGTGTAGACAAATTTTGCTTTTTAGCAACTTTAAAAAAATATAAAATAAAGATAATAAAACTATATATAATAAATATTTAAAATTTAGAGTAATAACGGTGTATTGATATAAATATAGTTACGTACATAAATATAGTAATAATTCAAGGGGGAGTAACGTAAGGAACAAGGGTGAAGTAACTGATAAGCATAAGCTTTCGAGAGGTGGAGGGAGGCGGGGGCTGAGACATGTACATGAAGAAAGAAAAACGCCCGACAGCTACGGAAGCGGCTGCTTGATAGGGCCGCGATTGGTTTCGATCTCTTACACAGAGAGACGATTCAAACTCACAAATACTTCGATCCCAGAAATTGCAAATTCCACCTGCTCACCCCGAAACCGAAGAAATGTCTCTCCTATTCCATTTCCCCTATCCATTTTTCTCCTCTGCTTCCCGTTGTTTCCCATTCTTAATCCTTTTTCCTGTGGCGCCCACCGCCCGGATCCACTCATCACGACGGCCAAGGCTTCCACCACCGCCGTCGCACTGCTCTGCCCACTTCTTTCCTCAGATGCCGTAGTGGGTACTGTTCTTTTTCCCTCTCTGCTTTCTTTTTCGCTGCCTTTTTGTCGTTCTATCTTTTCCCAAATTTTCAATGCTCATGATTTCTCTCTACTTATTTACAATTGAATGTTATGCCTAAGAGATCCCTTTAATCGCGCTTGTAAATCTGATCTATCCATTTTGTTCTTGTTCTTTTTCTTCTTCAAATGCCTCACTCTTTAGTCCTCTTAGCTTCTCCATTTCAATATGTGCGTCTGTTGCACCTCTTTTGTGATAAAACTAAAAGAGGGAATGATTTCTGGTTGAATTATACAATGAGAGAGTTATTTTTGGCGATCGCCTGATGCATTCATAGTTGATTTTGGTTCCTTAATGAGATTCCGGAGGAGAAGACAATGCTTTCCATCTTGTTCTTCCCTCCACGAAGTAATCCACCAATCAATCTCTATTGATTTATTAACGTCTTGATCATTCCAAATTTTCTGGAACATCCACTTTCTGATTGTCTGCTTTGTGAAGGGAGTATCATTTTTCTATGTTGTTTATATCTGTTGTGTGCCTTTGGTGAAACTATGTGTTCTTTCTGCAAATCATTTTACTGACAGTGAATTCTAAAAATTGTTATAGGTTGATGAAGATGAAATATATTGGAGACGTAGAAGAGGTGATGAAGAGTTAGAATGGTCACATAGTTCCACCCATGTAATTTTAAAGCTAGCTCAATGTTTTAGTGAGTAGAGCTTTGTTTGAATCTCTTTTTGTGGAGTAGAGATTAACTTCTAGAATTATGACTTTTTGGAATTTACTTTTGCTGTCTCATTATCACCCTTTTGCTTACTAATTAGCTTGTGGTAAATGTAGCTAATGCTATGGTTGGACCACGATCATGGATCGGAGGAATCTTCAATCGCTCTGGCAATAAAAAGAACGATAAGTTTCAATACCCTTTGAGTCCTCTTCAGGTAATTAACGTCAATAATGTGTTGGTAGTCTGTGTACTGTGTCTCATTCATTGGCTTTATTTGTGTTGCATTATTACACTAGTGGTATGGTTTGTAAATGTGAGGAAAGTTTTACCTCTTGTTCATGAAAAGGCATTGGCACCAATAAGTGGGACTATAATATTGTCTGTTTTGGCCCGTTACGTATCGCCGTCAGCCTCGCGGTTTTAAAACGCGTCTACTAGTGAGAGGTTTCTACACCTTTATAAGGAAGGTTTCCACACCCTTATAAGGAAGGTTTCCACACCCTTATAAGGACCGTTTCGTTTCTGACTAAAGAAGATTTTGAGCTTTGCACATCCCCTTTCTCTCCACCTACCTATAGAGCATGCATGTAATAGAACTAAAACCTTGTGTTTCTATCAACATAACTTTCTCCAACAGGTTGTAAGTTTATATCTCCACCCCTAACATCTGATGTAATGTTCTTAAAACAATATATTCTCATGTGATTGCGAGAATGTCTATATGCATGGATTATGGAGCCTTATATGCCCTCAGTTTATTAATTTAGAACTCGTCGTCCACTTTTCATTGGATGAGACGTTCTAATGTTCAAGTAAATATACTTATATTTAAGACTGTTTTTCTAATGGCTTGTTGATAGGGGTGTATGAAGGTTGAGCATGTATGTTCTAACATGTGACTTATTCTACCAGGAGGAAAGGCTTCAGAGGCTACAAGACCGAATTCATATACCTTATGATGAGATGTGCATTGAGCATCAAGTACTTTTCTTTATTCGTTTTAGCACTCTTCAGGCTTTAAACTTCTATGCTCTATGAAGATTATCTGAGCGCTCTGAGATGAGTCTAAGCAACGAACTCACTGCATTTTTCGTCATTGACAAGATCCCATTTTAGAAGCCCAAAACCTCGTCCTTGATTTGAGTTTTGATCTATTTGAATTTTGAATAAGGCCATCATTCATGTCTTTCATTTATACTGCATGCAGACAGCTAGAAGTTTAGCGTTTTCCCATTTATGCTTTGTTTTCATCATCTGTGAGCTCAAGTAATCATCCTTCATTATTTATAGGAAGCTCTGAGGGCATTGTGGGATGTTGCCTTTCCAGATGTTGAGCTTAAAGGGTTGATATCTGAGCAATGGAAAGAAATGGGTTGGCAAGGTGCTAACCCATCCACTGACTTTAGGTATAATCCAAGCCACCATTTCAATGTATATTCTTTGTTGTCTTACCTCTTATTAATGGTGATAGTGAAGTAAATGTTGAGGCTTGTTTTAATTTTTACAAAGACTTAGCAACCCATCTAAAATATAGTTCGAAGACTAGAGCTATCATAGGAGACGAGCAACATTATTTGTAACAGCCCAAGCTCACCGCTAACAAATATTATCCTTTTGGGCTTTCCCTTCAAGGTTTTTAGAACGCGTCGTCTAGGAAGAAGTTTCCACACCCTTATAAAGAATGTTTTGTTCCCCTCTCCAACTGATGTGCGATCTCACAATCCAGTCCTCGCTGGCACTCATTCCTCTCTCTAATCAATGTGGGATCTCACAATCCAACTGTAACGCCCCTAATTTTTTTAGCCTAAATTAGTGGCGTTACAAATTGTATTAGAGCCAGACACTGAGCAGTGTGCTAGCAAGGACGCTGGGTCCTGAAGGGGGGTGGATTGCGAGATCCCACATCGGTTGGAGAGGGGAACAAAGCTTTTTTTGTAAGGGTGTGGAAACCTTTATCTAGCAGACACGTTTTAAAAACCTTGTGGCGAAGCCGAAAGAGGACAATATCTGCTAGTGGTGGGTTTAGAGAGATTGAGCGTGTGAGACAGTACAGTGCACACACGTGCGTACATCTGCGTTTGATTGAGGGAGGAATTCATTTTCTTCTAAATGCATTACACTTTAGTGGATTGGTAAAAAGAAACTGTTCATATGTTAGCTGAATACTTTGTTTTTTATACTTAAAATCAAATATTTTCTCACAGTTGGCTGCTTTTCTTAGGGGTTGCGGTTTCATTTCCCTTGAAAACTTGCTGTTTTTTTCCAGGACATTTCCGGTATGTCCTATTCTGTTGTATCCTCATTTCCTTAATGCGTGAGTGAGTTATCACTAATCTCGTACAAATTCAAAATGAAGGCATCTTTTCGTAGGTTATTATGGAAGGAAGGTGGCAATCGAGCAACTTGGGAATATCCGTTTGCTGTTGCTGGCATAAACATATCGTATATGTTGATTCAAATGTTGGATTTAAAATCAGGTATGTATCTGCATTTTTCGACTCGAATAGTTCGCTTTAATAATGGGAATGATCTCTGCAGCAGGTCTTGTTACCATGAACCCAACAAAATATGTAACAAAACCAATAACAAAGAACATGATTTAAAAGCCTTCTCGAAATCGACTCTGTCTAATACGTTCCCATCCCAGCAACTAAAAATTTTTGTTATCTCATCTCTTGTGTACAGCAAAGCCAAAGTGTATTCCAGGACTCAATTTTATGAGACTATTAGGAGGTACTGACTATCCCATCCATCATTTTGGTTTTTACTTGGACATATCACACATGTTTTCATTACTAAACTTCTGCGACGCTCACACAATACACACTGTTAACTCATGGCAGAAAACAAAGAAGCATTCGACATTCTATTCTGCGTAACTTTCGAATTGATGGATGCTCAATGGCTTGCCATGCATGCTTCCTACATGGAGTTCAATGTATTCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCCCTCCTCTCAATCTCACACACACTAACACTAGTCGTCGGTGTCATCGTCGTGTACCCAAAACTTTTGTTGAAGCTTTTGATACTCGTGATTGTTACAGGAGGTCCTGCAAGTAACCAGAGAACAGCTGGAAAGAGAGCTATCTCTAGAGGATATTCACAGAATAGAAGACTTACCAGCTTATAATCTGTTGCTTCTGTAG ATGAAATTTCAGCGTAATTTCGCGAATAACGACGATTGGTCTGGAGGCACTGCCACATGGATTGGACCTTCACACGTTGATGAAGATGAAATATATTGGAGACGTAGAAGAGGTGATGAAGAGTTAGAATGGTCACATAGTTCCACCCATGTAATTTTAAAGCTAGCTCAATGTTTTACTAATGCTATGGTTGGACCACGATCATGGATCGGAGGAATCTTCAATCGCTCTGGCAATAAAAAGAACGATAAGTTTCAATACCCTTTGAGTCCTCTTCAGGAGGAAAGGCTTCAGAGGCTACAAGACCGAATTCATATACCTTATGATGAGATGTGCATTGAGCATCAAGAAGCTCTGAGGGCATTGTGGGATGTTGCCTTTCCAGATGTTGAGCTTAAAGGGTTGATATCTGAGCAATGGAAAGAAATGGGTTGGCAAGGTGCTAACCCATCCACTGACTTTAGGGGTTGCGGTTTCATTTCCCTTGAAAACTTGCTGTTTTTTTCCAGGACATTTCCGGCATCTTTTCGTAGGTTATTATGGAAGGAAGGTGGCAATCGAGCAACTTGGGAATATCCGTTTGCTGTTGCTGGCATAAACATATCGTATATGTTGATTCAAATGTTGGATTTAAAATCAGCAAAGCCAAAGTGTATTCCAGGACTCAATTTTATGAGACTATTAGGAGAAAACAAAGAAGCATTCGACATTCTATTCTGCGTAACTTTCGAATTGATGGATGCTCAATGGCTTGCCATGCATGCTTCCTACATGGAGTTCAATGAGGTCCTGCAAGTAACCAGAGAACAGCTGGAAAGAGAGCTATCTCTAGAGGATATTCACAGAATAGAAGACTTACCAGCTTATAATCTGTTGCTTCTGTAG ATGAAATTTCAGCGTAATTTCGCGAATAACGACGATTGGTCTGGAGGCACTGCCACATGGATTGGACCTTCACACGTTGATGAAGATGAAATATATTGGAGACGTAGAAGAGGTGATGAAGAGTTAGAATGGTCACATAGTTCCACCCATGTAATTTTAAAGCTAGCTCAATGTTTTACTAATGCTATGGTTGGACCACGATCATGGATCGGAGGAATCTTCAATCGCTCTGGCAATAAAAAGAACGATAAGTTTCAATACCCTTTGAGTCCTCTTCAGGAGGAAAGGCTTCAGAGGCTACAAGACCGAATTCATATACCTTATGATGAGATGTGCATTGAGCATCAAGAAGCTCTGAGGGCATTGTGGGATGTTGCCTTTCCAGATGTTGAGCTTAAAGGGTTGATATCTGAGCAATGGAAAGAAATGGGTTGGCAAGGTGCTAACCCATCCACTGACTTTAGGGGTTGCGGTTTCATTTCCCTTGAAAACTTGCTGTTTTTTTCCAGGACATTTCCGGCATCTTTTCGTAGGTTATTATGGAAGGAAGGTGGCAATCGAGCAACTTGGGAATATCCGTTTGCTGTTGCTGGCATAAACATATCGTATATGTTGATTCAAATGTTGGATTTAAAATCAGCAAAGCCAAAGTGTATTCCAGGACTCAATTTTATGAGACTATTAGGAGAAAACAAAGAAGCATTCGACATTCTATTCTGCGTAACTTTCGAATTGATGGATGCTCAATGGCTTGCCATGCATGCTTCCTACATGGAGTTCAATGAGGTCCTGCAAGTAACCAGAGAACAGCTGGAAAGAGAGCTATCTCTAGAGGATATTCACAGAATAGAAGACTTACCAGCTTATAATCTGTTGCTTCTGTAG MKFQRNFANNDDWSGGTATWIGPSHVDEDEIYWRRRRGDEELEWSHSSTHVILKLAQCFTNAMVGPRSWIGGIFNRSGNKKNDKFQYPLSPLQEERLQRLQDRIHIPYDEMCIEHQEALRALWDVAFPDVELKGLISEQWKEMGWQGANPSTDFRGCGFISLENLLFFSRTFPASFRRLLWKEGGNRATWEYPFAVAGINISYMLIQMLDLKSAKPKCIPGLNFMRLLGENKEAFDILFCVTFELMDAQWLAMHASYMEFNEVLQVTREQLERELSLEDIHRIEDLPAYNLLLL Homology
BLAST of Csor.00g100910 vs. ExPASy Swiss-Prot
Match: Q54YW1 (ELMO domain-containing protein A OS=Dictyostelium discoideum OX=44689 GN=elmoA PE=1 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 7.6e-25 Identity = 59/191 (30.89%), Postives = 101/191 (52.88%), Query Frame = 0
BLAST of Csor.00g100910 vs. ExPASy Swiss-Prot
Match: A6QR40 (Engulfment and cell motility protein 3 OS=Bos taurus OX=9913 GN=ELMO3 PE=2 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 5.6e-20 Identity = 62/209 (29.67%), Postives = 110/209 (52.63%), Query Frame = 0
BLAST of Csor.00g100910 vs. ExPASy Swiss-Prot
Match: Q499U2 (Engulfment and cell motility protein 3 OS=Rattus norvegicus OX=10116 GN=Elmo3 PE=2 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.6e-19 Identity = 62/209 (29.67%), Postives = 108/209 (51.67%), Query Frame = 0
BLAST of Csor.00g100910 vs. ExPASy Swiss-Prot
Match: Q8BYZ7 (Engulfment and cell motility protein 3 OS=Mus musculus OX=10090 GN=Elmo3 PE=1 SV=2) HSP 1 Score: 97.8 bits (242), Expect = 2.1e-19 Identity = 62/215 (28.84%), Postives = 109/215 (50.70%), Query Frame = 0
BLAST of Csor.00g100910 vs. ExPASy Swiss-Prot
Match: Q54VR8 (ELMO domain-containing protein B OS=Dictyostelium discoideum OX=44689 GN=elmoB PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 2.8e-19 Identity = 55/184 (29.89%), Postives = 96/184 (52.17%), Query Frame = 0
BLAST of Csor.00g100910 vs. NCBI nr
Match: KAG6570845.1 (ELMO domain-containing protein A, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 617 bits (1591), Expect = 2.65e-223 Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0
BLAST of Csor.00g100910 vs. NCBI nr
Match: XP_022943361.1 (ELMO domain-containing protein A-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 559 bits (1440), Expect = 2.15e-200 Identity = 268/269 (99.63%), Postives = 269/269 (100.00%), Query Frame = 0
BLAST of Csor.00g100910 vs. NCBI nr
Match: XP_023513041.1 (ELMO domain-containing protein A-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 551 bits (1420), Expect = 2.40e-197 Identity = 266/269 (98.88%), Postives = 267/269 (99.26%), Query Frame = 0
BLAST of Csor.00g100910 vs. NCBI nr
Match: XP_022986357.1 (ELMO domain-containing protein A-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 550 bits (1417), Expect = 6.89e-197 Identity = 266/269 (98.88%), Postives = 267/269 (99.26%), Query Frame = 0
BLAST of Csor.00g100910 vs. NCBI nr
Match: XP_023513039.1 (ELMO domain-containing protein A-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 546 bits (1408), Expect = 1.68e-195 Identity = 266/270 (98.52%), Postives = 267/270 (98.89%), Query Frame = 0
BLAST of Csor.00g100910 vs. ExPASy TrEMBL
Match: A0A6J1FRI0 (ELMO domain-containing protein A-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448148 PE=4 SV=1) HSP 1 Score: 559 bits (1440), Expect = 1.04e-200 Identity = 268/269 (99.63%), Postives = 269/269 (100.00%), Query Frame = 0
BLAST of Csor.00g100910 vs. ExPASy TrEMBL
Match: A0A6J1J7B4 (ELMO domain-containing protein A-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484122 PE=4 SV=1) HSP 1 Score: 550 bits (1417), Expect = 3.33e-197 Identity = 266/269 (98.88%), Postives = 267/269 (99.26%), Query Frame = 0
BLAST of Csor.00g100910 vs. ExPASy TrEMBL
Match: A0A6J1CFM1 (ELMO domain-containing protein A isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010989 PE=4 SV=1) HSP 1 Score: 498 bits (1283), Expect = 8.78e-177 Identity = 233/267 (87.27%), Postives = 252/267 (94.38%), Query Frame = 0
BLAST of Csor.00g100910 vs. ExPASy TrEMBL
Match: A0A0A0KD30 (ELMO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G128640 PE=4 SV=1) HSP 1 Score: 491 bits (1264), Expect = 7.14e-174 Identity = 228/268 (85.07%), Postives = 255/268 (95.15%), Query Frame = 0
BLAST of Csor.00g100910 vs. ExPASy TrEMBL
Match: A0A6J1G7C3 (ELMO domain-containing protein A isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451525 PE=4 SV=1) HSP 1 Score: 485 bits (1249), Expect = 2.21e-171 Identity = 227/270 (84.07%), Postives = 253/270 (93.70%), Query Frame = 0
BLAST of Csor.00g100910 vs. TAIR 10
Match: AT1G03620.1 (ELMO/CED-12 family protein ) HSP 1 Score: 366.7 bits (940), Expect = 1.7e-101 Identity = 172/262 (65.65%), Postives = 215/262 (82.06%), Query Frame = 0
BLAST of Csor.00g100910 vs. TAIR 10
Match: AT3G03610.1 (ELMO/CED-12 family protein ) HSP 1 Score: 287.0 bits (733), Expect = 1.8e-77 Identity = 144/268 (53.73%), Postives = 186/268 (69.40%), Query Frame = 0
BLAST of Csor.00g100910 vs. TAIR 10
Match: AT3G60260.3 (ELMO/CED-12 family protein ) HSP 1 Score: 283.5 bits (724), Expect = 1.9e-76 Identity = 134/236 (56.78%), Postives = 175/236 (74.15%), Query Frame = 0
BLAST of Csor.00g100910 vs. TAIR 10
Match: AT3G60260.1 (ELMO/CED-12 family protein ) HSP 1 Score: 283.1 bits (723), Expect = 2.5e-76 Identity = 134/233 (57.51%), Postives = 174/233 (74.68%), Query Frame = 0
BLAST of Csor.00g100910 vs. TAIR 10
Match: AT3G60260.2 (ELMO/CED-12 family protein ) HSP 1 Score: 283.1 bits (723), Expect = 2.5e-76 Identity = 134/233 (57.51%), Postives = 174/233 (74.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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