Csor.00g100500 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAGCAAAGCACCAAGCTGGGCTGATCAGTGGGGTTCGGGAGATTATGGAGTCGAAGACGATGACAACACAGCGATGACGAAGAAAGGGAGCAGCAATGGCAATAGTAGCAAGAAGATGGCAGATGTAAAGGCAGCAGCCTCAGCTGGATTTGTGAAGGCCAAGTCTGCTGCAGCAGTTGGTGCTCAAAAAGTGAAATCTGGAACTTCAGTAGGCATCAAATGGGTCAAGAATCAGTACCAGAAAAAGGTCTCCAAATGACTCAAAATGCTTGAATTCTCCCTTTTGAACACTTTTTTTTTTCTTTTTCTTTAACATAAATTGTAGTCTGGATATTTTTGTAGTTCTGTGAAAACAAACCCAATTTCCTGCATTTTTTCGATCGGACTAGACGAGCTTCAAACGAAAATTTAGACACAAACTGTTATGAATTCCCATTATTTACAACATGACTTTTGAATAGCGCAAATAGGACTGGTTTTAGTTAGTTAAAATAAAACTATACAGAAAAGCTTTGCATTTGAAGGGATAACACAGAGACAACTGATGGGGGTGAGGAGAATATACAAGAAGAAGAGCAAATATGATCCTTTCTCCTTCCCATTTTATGTAGACCTTCCGAGTCTTGTTGTGTTTCAGCACGCCCCGAACGTGTTTTCCCCGCTGTAG ATGGGAAGCAAAGCACCAAGCTGGGCTGATCAGTGGGGTTCGGGAGATTATGGAGTCGAAGACGATGACAACACAGCGATGACGAAGAAAGGGAGCAGCAATGGCAATAGTAGCAAGAAGATGGCAGATGTAAAGGCAGCAGCCTCAGCTGGATTTGTGAAGGCCAAGTCTGCTGCAGCAGTTGGTGCTCAAAAAGTGAAATCTGGAACTTCAGTAGGCATCAAATGGGTCAAGAATCAGTACCAGAAAAAGAAAAGCTTTGCATTTGAAGGGATAACACAGAGACAACTGATGGGGGTGAGGAGAATATACAAGAAGAAGAGCAAATATGATCCTTTCTCCTTCCCATTTTATGTAGACCTTCCGAGTCTTGTTGTGTTTCAGCACGCCCCGAACGTGTTTTCCCCGCTGTAG ATGGGAAGCAAAGCACCAAGCTGGGCTGATCAGTGGGGTTCGGGAGATTATGGAGTCGAAGACGATGACAACACAGCGATGACGAAGAAAGGGAGCAGCAATGGCAATAGTAGCAAGAAGATGGCAGATGTAAAGGCAGCAGCCTCAGCTGGATTTGTGAAGGCCAAGTCTGCTGCAGCAGTTGGTGCTCAAAAAGTGAAATCTGGAACTTCAGTAGGCATCAAATGGGTCAAGAATCAGTACCAGAAAAAGAAAAGCTTTGCATTTGAAGGGATAACACAGAGACAACTGATGGGGGTGAGGAGAATATACAAGAAGAAGAGCAAATATGATCCTTTCTCCTTCCCATTTTATGTAGACCTTCCGAGTCTTGTTGTGTTTCAGCACGCCCCGAACGTGTTTTCCCCGCTGTAG MGSKAPSWADQWGSGDYGVEDDDNTAMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAAAVGAQKVKSGTSVGIKWVKNQYQKKKSFAFEGITQRQLMGVRRIYKKKSKYDPFSFPFYVDLPSLVVFQHAPNVFSPL Homology
BLAST of Csor.00g100500 vs. NCBI nr
Match: KAG6570886.1 (hypothetical protein SDJN03_29801, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 264 bits (674), Expect = 1.06e-88 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0
BLAST of Csor.00g100500 vs. NCBI nr
Match: KAG7010736.1 (hypothetical protein SDJN02_27532, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 157 bits (396), Expect = 5.09e-47 Identity = 85/86 (98.84%), Postives = 85/86 (98.84%), Query Frame = 0
BLAST of Csor.00g100500 vs. NCBI nr
Match: KAA0059574.1 (hypothetical protein E6C27_scaffold4837G00020 [Cucumis melo var. makuwa] >KAE8652289.1 hypothetical protein Csa_022099 [Cucumis sativus] >TYK24204.1 hypothetical protein E5676_scaffold27G00040 [Cucumis melo var. makuwa]) HSP 1 Score: 141 bits (355), Expect = 9.18e-41 Identity = 78/87 (89.66%), Postives = 82/87 (94.25%), Query Frame = 0
BLAST of Csor.00g100500 vs. NCBI nr
Match: KAG7034974.1 (hypothetical protein SDJN02_01767, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 133 bits (334), Expect = 1.99e-36 Identity = 74/86 (86.05%), Postives = 79/86 (91.86%), Query Frame = 0
BLAST of Csor.00g100500 vs. NCBI nr
Match: KAG6604861.1 (hypothetical protein SDJN03_02178, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 131 bits (330), Expect = 1.86e-35 Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 0
BLAST of Csor.00g100500 vs. ExPASy TrEMBL
Match: A0A5D3DKS5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00040 PE=4 SV=1) HSP 1 Score: 141 bits (355), Expect = 4.44e-41 Identity = 78/87 (89.66%), Postives = 82/87 (94.25%), Query Frame = 0
BLAST of Csor.00g100500 vs. ExPASy TrEMBL
Match: A0A0A0LR11 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418340 PE=4 SV=1) HSP 1 Score: 141 bits (355), Expect = 5.82e-40 Identity = 78/87 (89.66%), Postives = 82/87 (94.25%), Query Frame = 0
BLAST of Csor.00g100500 vs. ExPASy TrEMBL
Match: A0A5C7HG95 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_020628 PE=4 SV=1) HSP 1 Score: 122 bits (305), Expect = 1.79e-33 Identity = 68/86 (79.07%), Postives = 76/86 (88.37%), Query Frame = 0
BLAST of Csor.00g100500 vs. ExPASy TrEMBL
Match: V4UEV4 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017336mg PE=4 SV=1) HSP 1 Score: 110 bits (274), Expect = 8.43e-29 Identity = 61/86 (70.93%), Postives = 73/86 (84.88%), Query Frame = 0
BLAST of Csor.00g100500 vs. ExPASy TrEMBL
Match: A0A2G5E5C3 (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_01100038v1 PE=4 SV=1) HSP 1 Score: 108 bits (271), Expect = 2.41e-28 Identity = 62/86 (72.09%), Postives = 70/86 (81.40%), Query Frame = 0
BLAST of Csor.00g100500 vs. TAIR 10
Match: AT3G48180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19020.1); Has 84 Blast hits to 84 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 46.2 bits (108), Expect = 2.4e-05 Identity = 31/77 (40.26%), Postives = 43/77 (55.84%), Query Frame = 0
BLAST of Csor.00g100500 vs. TAIR 10
Match: AT1G11740.1 (ankyrin repeat family protein ) HSP 1 Score: 43.1 bits (100), Expect = 2.1e-04 Identity = 30/85 (35.29%), Postives = 38/85 (44.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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