Csor.00g100160 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g100160
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2
LocationCsor_Chr20: 3120289 .. 3125548 (+)
RNA-Seq ExpressionCsor.00g100160
SyntenyCsor.00g100160
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCAATTGGTGCTAGATCTGTTTTCCGGTCATTTTCAGGCTCGGCACGCCGTGCTGCTGCTCAGATCGGTTCTCAAGCCAAGTCGTCATCAAGTACTCCTTTTCGCATGGCAACTACGAAGCCTCTCTCCCATCGAACTTTCAGGTGCGTTGCTTAATGCTTTTGCGTCCATTTGAAGTGCCAAAGATTCTGTATCTAGAGATCTTGGAGTTTCTTTTCTCCAAAAGGAGTCAACGAAAACGGTGTTCCCATCTTCAAATTTATTTCTCTCAGTTTTTTAGTTGCGATACTAAGCTCTAGAACTTTGAAATGACAACAAGATAGCATTTCTCCTTTACCTTGTTTTTAAATAACGAACTCCGCAAAACGCTTCAATAAATTAGGTAATGTATTTTTCCTGAAGGTGTGCGGCTGAGATGAGCTTCTGTTTGGAGTCGATGATGCCATTTCACTCTGCGTCGTCTTCAGCTTTGATGACCTCAATGCTCTCTGTCTCGCGCAGCAGCTGCGGTTGGCTTCCCGAAGGTGCGTAACTGATAATTGAACTCTGAAGTTTCTTGATCTGTCACGAGCTAGATCGAAAGAGGCAACGACGCTAATATAAATTTGTATAGCTCGGAATTTAGATCATATCTACGATTTTAGCATGATTTCTTCCGTGGACAAGAAAGAAAGCTGATAATTTGCCGGAAATTGATTTTCTATTTGCATTGGTTCTTCGTTGGATGAATCTCAGATTTATAATTATTTGCATGAATCAAGAAAGAGAGCAGTATTTTGGGCGAGAATAATGGTCAACTATATTTATAAATAGTGATATCTATATTAAGGTTTAGGGATCATAATCTGATGTTTCTGGAGGATGAAAGATCTATGCTAGTATTCTTTGATTAAAGCAGTCATGTCTATGAACCATCAGACCGTACTCCATGAAAAGTTTTCTTTTTGGGTTAAATTTAGTACTCATACGGATTATTATGCCAAGATACCTGATCCAACTTCGTAATTTTCTTGTTTTTTTGTTTTGAAAGGAGAAGTGGATCTGCTTCTAGGTTGTCTAACTAGATTTTTTACTCTTGAATTAGGCAGCTAGCACACTTTATAGGCCCATTGATGTTCTTCTTGCCTTCTTGTTGCTCTGGTGAGTTGGTGCCTGTAAACTCATATAGGACTGATAAAGTTGAACGGAATAATAGTTAACATGCATGTACAACAACTCGATCATTTTCCCCCCTAGTAGGCAGTTTATTACACCTAGTAGATGATCTTCAAATTAGGATGCAAACAAGCCTAACAAACAATAATGATTCATTCTCTCTTTCCCCCACCTTCCATCACCATACATCGATTAGTTTGTTGTCGGTTGGGGGGGGGGGGGGGAGGGTGGTGGGGGGGGGGGGTGGGGGGGGAGGTCTTTTTTTTTTTTTTTTTTTTTTTCTGGGGGGGGGGGGGGGGGGGGGCGGGGTGGGTGAGGGTGGCGGGGGGGGGTGGGTGAGGGAGCGGGGGGGGGGGGGGGTGGGGGGGTGGGGGGGGAGGGGGGGGGTGGGTGGGGTTGTGGTGTGGTGTGGAGGTGGGGGGGGGGTGGGGGAAGGGGTGGTAGGGGGGGGGGTGGGGGGGTGGATGGGGGGGGGGGGTGGGGGCGGGGGGTGGGGGGGGGGTGGGGGGGGGGGCGGCGGGGTTGGGGGGGGGGGGGGGTGGGGGAGAGGGGGTGGGGGCTGGTGTGGCGGGGGTGTTGGGGGTTTTTTGGGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTGGGGTGGGGGGGTGGTGGGTGGGGTGGGGGGGGGGTGGAGTGGGGGTGGGTGGTGGGGGGGGGGGGGGGGGTGGGGTGGGTGGGGGGGGAGGGGGGTGGGGGGGGGGGGGGGGGGGCTGGGGGTGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGTGGGTGGGGGGGTGGGGGGGGGTGGGGAGGGGGGGTTGGGGGGGAAGTGGGGTGTGGGGGGGGGTGGGGGGGGGGGGGGTGGGGGGGGGGGGAGAGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGTGGGTGTATGGGGGGGGGGGGGGGGGGGCGGGGCTGGGGTGGGGGTGGGGTGGGGGGGGTGTGGGGAGGGGGGGGGGTGGGTGATGGGGGGGTTGTGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGTGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGTTTTGGGTGGTGGGGGGGGGGGTGGGGGGGGGGGGGGGGTTGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGTGGGTGGGTGGGGGGGGGGGGGGGGGGGGGGTGGTGGGGGAGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGTTGGGGGGTGGGGGGGTGGGGGGGGGGGGGGGGTGGGGGGGTGGGGGGGGGGGGGGGGTGGGGGGTGGGGGGGGTGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGTGGGGGGGGGTGGGGTGGGGGGGTGGGGGGGGTGGGGGGGGGTGGGGGGGGTGGGTGTTGGGTTGGTGGGGGGGGGGTGGGGGTGGGGGGGGGGGGGGTGGGTGGGTGGGGGGGTGGGGGGGGGGGGGTGGGGGGGGGGGGGGTGGGGGGTGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGTGTGTGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGATGGGTGGTGGGGGGGGGGGGGGGGTGGGGGGGGGGGTGGGGGGGGGGGGGGGGGTGGGTTTTGGTGGGGGGGGGGGGGGGGGTGGGGGAGGGGGGGGGGCGTTTTTTGGGGGGAAAATCACCCCCAAAAAAATTGGTTTGGGGGGGGGGGGGGGTGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGTGGGGGGGGGTGGGGGGGGGGGGGGTGGGGGGGGGTTTGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGTGGGGGGGGGGGTGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGTGGGGGTTGGGGGGGGGGGGGGTGGGGGTGGTGTTGGGGGGGTGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGTGGGGGGGGTGGGGGGGGGTGGGTGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTGTTGGGGGGGGGGGGTGGGTGGGGGTGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGTGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGTTTGGGGGTTGGGGGGGGTGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGTGGGGGGGGGGGTGGGGGGGGGTGGGGGTGGGGGTGGGGGGGGGGGGGGTGGGGGTGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGTGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTGTGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGTTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGTGGGGGGGGGTGGGGGGGGGGTGGGGGGGGGGGGGGGTGGGGGGGGGGGGTGGGGGGGTTGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGTGGGTTTGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGTGGGGGGGGGGGGGGGGTGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGAGTTTTAAGTCCTTTTGCTGAACTCGGGTGTTATAAACCTTCTCTTGATTCTTTTATATGTTTACTAGAACGAGTCATTTATGCAAAAACCTTCCATTTTTTTTATTCAAATTGTTAATTGAAAAAAATACATTCCCCTGTTTTGAATGTAGGCAAAGACAAGACTAGATGAGGATCGAGAAGCAGGAAGGAATGACTTGACTTGTTTTTTGAGTTTCGCCTATAAGTCCTAGCGATGAATATCCCCATGCCCTACCCCCAAGACAAAGAATAGAAAGAAGAAAACAAACTTCTAGGAGATGATCCTATCAATAGGTTAAATGAGATGATTGTATTTGGAATGAAATAATAAACTACGATATCCTATTTCATTCACTGTGTTTGTAGATGGCTGTTTTGTGAAGTGTTGAAAGATTACATGTTCAATTTAGTTCTGCAATTATATTGGATTACAGACTACTCGATTGTTGCAGAATAAATTTCTGTTTTGCAATATTTACTTTGTTTGTCAAGTATTTGGCACTGTTGATTTGTTGTTATCTTCCCAATTCCACTACTTTAATGAGGAGTTTGCGGTTTAAATACACACACCTTTTTTTTTTTCCAACTTATTTTAAGGATGATTGGTGAATTTTTAATGTCTGCAACCTCCCAATTTGTTTCTTGTTTTGATTGGAATATCAAACTGACATTAATAACACATTGATCACTTGTGTTCATCAGCATGCAATGATGATCTATGA

mRNA sequence

ATGGCTTCAATTGGTGCTAGATCTGTTTTCCGGTCATTTTCAGGCTCGGCACGCCGTGCTGCTGCTCAGATCGGTTCTCAAGCCAAGTCGTCATCAAGTACTCCTTTTCGCATGGCAACTACGAAGCCTCTCTCCCATCGAACTTTCAGGTGTGCGGCTGAGATGAGCTTCTGTTTGGAGTCGATGATGCCATTTCACTCTGCGTCGTCTTCAGCTTTGATGACCTCAATGCTCTCTGTCTCGCGCAGCAGCTGCGGTTGGCTTCCCGAAGCATGCAATGATGATCTATGA

Coding sequence (CDS)

ATGGCTTCAATTGGTGCTAGATCTGTTTTCCGGTCATTTTCAGGCTCGGCACGCCGTGCTGCTGCTCAGATCGGTTCTCAAGCCAAGTCGTCATCAAGTACTCCTTTTCGCATGGCAACTACGAAGCCTCTCTCCCATCGAACTTTCAGGTGTGCGGCTGAGATGAGCTTCTGTTTGGAGTCGATGATGCCATTTCACTCTGCGTCGTCTTCAGCTTTGATGACCTCAATGCTCTCTGTCTCGCGCAGCAGCTGCGGTTGGCTTCCCGAAGCATGCAATGATGATCTATGA

Protein sequence

MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEACNDDL
Homology
[Close]
BLAST of Csor.00g100160 vs. ExPASy Swiss-Prot
Match: Q93ZJ3 (Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD6 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.6e-11
Identity = 44/94 (46.81%), Postives = 60/94 (63.83%), Query Frame = 0 

Query: 5   GARSVFRSFSGSARRAAAQIGSQAKSSSSTP--FRMATTKPLSHRTFRCAAEMSFCLESM 64
           GARS+ R  + S+R AAA  G  A  + S P  FR    +       R   E+SFC+ES+
Sbjct: 9   GARSMLR--AASSRSAAASTGRFASQAKSAPPLFRATARRSPLLSPLRNPVELSFCVESL 68

Query: 65  MPFHSASSSALMTSMLSVSRSSCGWLPEACNDDL 97
           +P+HSA++SALMTS LS+S  + GWL +ACNDD+
Sbjct: 69  LPYHSATASALMTSKLSISGQTYGWLSDACNDDV 100

[Close]
BLAST of Csor.00g100160 vs. NCBI nr
Match: KAG6570920.1 (Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 176 bits (447), Expect = 2.18e-55
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0 

Query: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60
          MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60

Query: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPEACNDDL 96
          SMMPFHSASSSALMTSMLSVSRSSCGWLPEACNDDL
Sbjct: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPEACNDDL 96

[Close]
BLAST of Csor.00g100160 vs. NCBI nr
Match: XP_023512421.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 174 bits (442), Expect = 1.26e-54
Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0 

Query: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60
          MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHR FRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRNFRCAAEMSFCLE 60

Query: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPEACNDDL 96
          SMMPFHSASSSALMTSMLSVSRSSCGWLPEACNDDL
Sbjct: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPEACNDDL 96

[Close]
BLAST of Csor.00g100160 vs. NCBI nr
Match: XP_022943542.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 174 bits (442), Expect = 1.26e-54
Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0 

Query: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60
          MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60

Query: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPEACNDDL 96
          SMMPFHSASSSALMTSMLSVSRS CGWLPEACNDDL
Sbjct: 61 SMMPFHSASSSALMTSMLSVSRSCCGWLPEACNDDL 96

[Close]
BLAST of Csor.00g100160 vs. NCBI nr
Match: XP_022986408.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 174 bits (441), Expect = 1.79e-54
Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0 

Query: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60
          MASIGARSVFRSFSGSARRAAAQIGSQAK SSSTPFRMATTKPLSHRTFRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKLSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60

Query: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPEACNDDL 96
          SMMPFHSASSSALMTSMLSVSRSSCGWLPEACNDDL
Sbjct: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPEACNDDL 96

[Close]
BLAST of Csor.00g100160 vs. NCBI nr
Match: KAG7010763.1 (Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 163 bits (413), Expect = 2.96e-50
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0 

Query: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60
          MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60

Query: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPE 90
          SMMPFHSASSSALMTSMLSVSRSSCGWLPE
Sbjct: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPE 90

[Close]
BLAST of Csor.00g100160 vs. ExPASy TrEMBL
Match: A0A6J1FTB0 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448284 PE=4 SV=1)

HSP 1 Score: 174 bits (442), Expect = 6.11e-55
Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0 

Query: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60
          MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60

Query: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPEACNDDL 96
          SMMPFHSASSSALMTSMLSVSRS CGWLPEACNDDL
Sbjct: 61 SMMPFHSASSSALMTSMLSVSRSCCGWLPEACNDDL 96

[Close]
BLAST of Csor.00g100160 vs. ExPASy TrEMBL
Match: A0A6J1JGE8 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484153 PE=4 SV=1)

HSP 1 Score: 174 bits (441), Expect = 8.68e-55
Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0 

Query: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60
          MASIGARSVFRSFSGSARRAAAQIGSQAK SSSTPFRMATTKPLSHRTFRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKLSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60

Query: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPEACNDDL 96
          SMMPFHSASSSALMTSMLSVSRSSCGWLPEACNDDL
Sbjct: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPEACNDDL 96

[Close]
BLAST of Csor.00g100160 vs. ExPASy TrEMBL
Match: A0A6J1FX39 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111448284 PE=4 SV=1)

HSP 1 Score: 161 bits (408), Expect = 8.31e-50
Identity = 89/90 (98.89%), Postives = 89/90 (98.89%), Query Frame = 0 

Query: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60
          MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60

Query: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPE 90
          SMMPFHSASSSALMTSMLSVSRS CGWLPE
Sbjct: 61 SMMPFHSASSSALMTSMLSVSRSCCGWLPE 90

[Close]
BLAST of Csor.00g100160 vs. ExPASy TrEMBL
Match: A0A6J1FS03 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448284 PE=4 SV=1)

HSP 1 Score: 161 bits (408), Expect = 9.39e-50
Identity = 89/90 (98.89%), Postives = 89/90 (98.89%), Query Frame = 0 

Query: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60
          MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60

Query: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPE 90
          SMMPFHSASSSALMTSMLSVSRS CGWLPE
Sbjct: 61 SMMPFHSASSSALMTSMLSVSRSCCGWLPE 90

[Close]
BLAST of Csor.00g100160 vs. ExPASy TrEMBL
Match: A0A6J1JFZ5 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111484153 PE=4 SV=1)

HSP 1 Score: 161 bits (407), Expect = 1.18e-49
Identity = 89/90 (98.89%), Postives = 89/90 (98.89%), Query Frame = 0 

Query: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60
          MASIGARSVFRSFSGSARRAAAQIGSQAK SSSTPFRMATTKPLSHRTFRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKLSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60

Query: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPE 90
          SMMPFHSASSSALMTSMLSVSRSSCGWLPE
Sbjct: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPE 90

[Close]
BLAST of Csor.00g100160 vs. TAIR 10
Match: AT1G28395.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 74.3 bits (181), Expect = 5.9e-14
Identity = 45/94 (47.87%), Postives = 63/94 (67.02%), Query Frame = 0 

Query: 6  ARSVFRSFSGSARRAAAQIGSQAK---SSSSTPFRMATTKPLSHRTFRCAAEMSFCLESM 65
          ARSVFRS +  A   A +  +  K   SS+ T FRM    PL++R FR   E+S C+E+M
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSASSSALMTSMLSVSRSSCGWLPEACNDDL 97
          +P+H+A++SAL+ SMLSVSR   GW+ + CNDD+
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWIVDDCNDDV 95

[Close]
BLAST of Csor.00g100160 vs. TAIR 10
Match: AT2G20585.1 (nuclear fusion defective 6 )

HSP 1 Score: 70.1 bits (170), Expect = 1.1e-12
Identity = 44/94 (46.81%), Postives = 60/94 (63.83%), Query Frame = 0 

Query: 5   GARSVFRSFSGSARRAAAQIGSQAKSSSSTP--FRMATTKPLSHRTFRCAAEMSFCLESM 64
           GARS+ R  + S+R AAA  G  A  + S P  FR    +       R   E+SFC+ES+
Sbjct: 9   GARSMLR--AASSRSAAASTGRFASQAKSAPPLFRATARRSPLLSPLRNPVELSFCVESL 68

Query: 65  MPFHSASSSALMTSMLSVSRSSCGWLPEACNDDL 97
           +P+HSA++SALMTS LS+S  + GWL +ACNDD+
Sbjct: 69  LPYHSATASALMTSKLSISGQTYGWLSDACNDDV 100

[Close]
BLAST of Csor.00g100160 vs. TAIR 10
Match: AT2G33847.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28395.4); Has 74 Blast hits to 74 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 67.8 bits (164), Expect = 5.5e-12
Identity = 43/90 (47.78%), Postives = 58/90 (64.44%), Query Frame = 0 

Query: 6  ARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPF 65
          ARSVFRS  G A  AA +      SS+ + F++    PLSHR FR   E+S C+E+M+P+
Sbjct: 4  ARSVFRSGVGRAAVAALRSTKPMPSSARSSFKLPKQSPLSHRIFRSPVELSCCVETMLPY 63

Query: 66 HSASSSALMTSMLSVSRSSCGWLPEACNDD 96
          H+A++SAL+ SMLSVS  S  W  + C DD
Sbjct: 64 HTATASALLNSMLSVSGRSI-WTFQDCIDD 92

[Close]
BLAST of Csor.00g100160 vs. TAIR 10
Match: AT2G20585.2 (nuclear fusion defective 6 )

HSP 1 Score: 65.9 bits (159), Expect = 2.1e-11
Identity = 42/93 (45.16%), Postives = 58/93 (62.37%), Query Frame = 0 

Query: 5  GARSVFRSFSGSARRAAAQIGSQAKSSSSTP--FRMATTKPLSHRTFRCAAEMSFCLESM 64
          GARS+ R  + S+R AAA  G  A  + S P  FR    +       R   E+SFC+ES+
Sbjct: 9  GARSMLR--AASSRSAAASTGRFASQAKSAPPLFRATARRSPLLSPLRNPVELSFCVESL 68

Query: 65 MPFHSASSSALMTSMLSVSRSSCGWLPEACNDD 96
          +P+HSA++SALMTS LS+S  + GWL +AC +D
Sbjct: 69 LPYHSATASALMTSKLSISGQTYGWLSDACKED 99

[Close]
BLAST of Csor.00g100160 vs. TAIR 10
Match: AT1G28395.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 64.7 bits (156), Expect = 4.6e-11
Identity = 41/92 (44.57%), Postives = 60/92 (65.22%), Query Frame = 0 

Query: 6  ARSVFRSFSGSARRAAAQIGSQAK---SSSSTPFRMATTKPLSHRTFRCAAEMSFCLESM 65
          ARSVFRS +  A   A +  +  K   SS+ T FRM    PL++R FR   E+S C+E+M
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSASSSALMTSMLSVSRSSCGWLPEACND 95
          +P+H+A++SAL+ SMLSVSR   GW+ +  ++
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWIVDGLDE 93

The following BLAST results are available for this feature:
BLAST of Csor.00g100160 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q93ZJ31.6e-1146.81Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=370... [more]
BLAST of Csor.00g100160 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6570920.12.18e-55100.00Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial, partial [Cucurb... [more]
XP_023512421.11.26e-5498.96protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 ... [more]
XP_022943542.11.26e-5498.96protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 ... [more]
XP_022986408.11.79e-5498.96protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 ... [more]
KAG7010763.12.96e-50100.00Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial, partial [Cucurb... [more]
BLAST of Csor.00g100160 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FTB06.11e-5598.96protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 ... [more]
A0A6J1JGE88.68e-5598.96protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 ... [more]
A0A6J1FX398.31e-5098.89protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 ... [more]
A0A6J1FS039.39e-5098.89protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ... [more]
A0A6J1JFZ51.18e-4998.89protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 ... [more]
BLAST of Csor.00g100160 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G28395.45.9e-1447.87unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G20585.11.1e-1246.81nuclear fusion defective 6 [more]
AT2G33847.15.5e-1247.78unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc... [more]
AT2G20585.22.1e-1145.16nuclear fusion defective 6 [more]
AT1G28395.24.6e-1144.57unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033251Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrialPANTHERPTHR33156:SF48PROTEIN NUCLEAR FUSION DEFECTIVE 6, CHLOROPLASTIC/MITOCHONDRIALcoord: 3..90
IPR043459NFD6/NOXY2-likePANTHERPTHR33156OS02G0230000 PROTEINcoord: 3..90

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g100160.m01Csor.00g100160.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000741 karyogamy