Csor.00g098980 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g098980
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	serine/arginine-rich splicing factor SR45a-like isoform X1
Location	Csor_Chr01: 3430863 .. 3433278 (-)
RNA-Seq Expression	Csor.00g098980
Synteny	Csor.00g098980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTATTGCGATTTGGCATCCGGTGCTCCAGAAACTTCTCTCACCTGGAGGCTATATATTATGCTTTCAGCTTGTTGCGTAAAACTTTATTGCATGCGCTTTCGTGCGATAAATTACTATCGTTGAATACTCGGTTGCATTTCCTTTCGATTTTGGTTTTGCTTCTGCAGTTTGGGCGGTAAATTCTTTCTATATCTCTCATTTCATGAACTCTTGCATTTATTTTCGTTGATTGAGATGATACGTTTGATTCTTGATTTCGATGATGTTTATGGAGAGAATTAGGGTAGGGTTATTGCTAGATTGTTTTTCGTGTGATTAGCATATTCATTTTCGAGTATTTTCTGCAGTTTTCTTGGAATTTTTTTGTTAACTTAGAATATTGGTGGAGAGATACTGTATTTCTTTCTATTGGAAGTCATGGATATTGTATTTCTTCATTTTCTTGTTCTTCACGAGTGTTAAACTGACGTTCCGATTTACCAGCTGCTCTATTCGAGAAACAAAATCATTGTAATTCCGTTGTACTCTTCTTTAGTAAATGCTGATCGTGTTAGGCTTGTCTTGGCTGATCAGGTCGCAGATGTCGTACTCCAGAAGGTCTAGGTACTCCCGCTCTCCTTCATACAAACGATCGGTCTCAAGGTCCCTGTCAAGGTCAAGGAGCCGTTCAAGGTATTTCTTGCTCAGGAACCCTTTGCTTGGTCGGTTTTTCCCATATTCTCTAGATCATCTGTATGATACATTTACTTCTATTTTGTGGATTTTTTTTTTTCAGGAGCCCTTCTAGTGACGTTGAAAATCCTGGTAACAATTTGTACGTCACTGGTTTGTCACATAGAATTACAAGGAGAGAACTCGAGAAGCATTTTTCTGCTGAAGGAACAGTATGTCGCAGATCTTATTTTCTTCAAAATTTTTCTTTGGCTTGTACTTTTGATGGTGGTGTATGTGTTTTGTTCTTTCTGTTGGTGATTGAATTTATGGACTATTTTCTCTATTCGTGAATGAATTTTTCATTCTCCAGGTGCTAGATGTTCATCTCGTGACTGATCCATGGACTAGAGAATCCCGTGGTTTTGGATTCATTACCATGTCTAGTAATGATGAGGCTGAACGTTGCATCAAATATCTAAATCGATCTGTACTTGAAGGTCGATTAATCACTGTGGAGAAGGTAAAAAATTAAACCAAGTACAATTTCATAGTCTCGAGATGTTTCTCATTATTAATGTTGTCTAAATTGTTCAACTTCAAATATTTACGGGATCTCTGGATGGTTTGTTGCAAGAGACTTGAGATTTTTGCTTCTGTGCACTTGAAGTTTTTTTGGCAGCAGGTTAGCTGTGTGTAGCAGCTCTTCATCAAACTCAAACTACAACTAATCAAACAAAACAAACACATGAAGTCTCAGAACATTGGGGTTGTATGCCCTGCATTTCTCTCTTTTATCTGCTAATTGATTCCTGTAGCCCTACTTTCCTCTCTACTGTGGCATGTTCCCCTGCTCTGCTGTTTTTCTTCAATTGACAATTGAATTGTCTCATTTACATCTCTTATTTTCTGATAGGCTCGAAGACGGAGAGGTAGAACTCCGACTCCAGGGAGATATTTTGGACTTAGAACAGTCCGTGGTGAGCTTTTAATCTAATGTTTGATTTATTTCTATGAAGTATTGCGCTATTTTTTTTTTTTTCTTTTGTCTAATCCTATGTTTATAACAGTGAGACGTAGATCGCGCAGCTACTCTTCTCGGCGTTCTCCCAGCTACTCTCCTTATAGCAGGAGCTTGAGCTGTTCGTCTAATTATTCATCTGACCGTAGCAGGAGCAGATCCCATTCTCCCAATCGACGCCGAAGATCAAATGACTCGCCATACCACTATAGATCATACTCCCCTTATAGCGGCCGAAGATATGATTCTCCATACTATAGGCGTCATAGGTCGTATTCTCGATCGCACTCTCCATGTAGTAGGTCGCCTACCAGGAGACGTGACAGGTCGTATTCTCGATCCCACTCTCATTGTAGTAGGTTGCCTACCAGGAGACACGACAGGTCGTACTCACCTTACGACTATTGCTCCCCTGATCCATACTACAGAAGGCACAGGGATCGGTCAGTTTCTAGGAGTGTCTCACCAAAGGCAAGGGTTTCTAGTAGACGTTATTCCCGCAGTTATTCTCCTAGGCACCGTAGAAGTGCCTCGAGGAGTTACTCCCGTAGCAGAAGTTATTCACGCAGTCTTTCCCCTGAACGAAGCAGGAGATTCAGGAGCCATTCACACAGTATCTCTCCTGAACGAAGGAGCTCGAGGAGTCGCTCTCGCAGCCATACTCCAAGGCACCATAAGAGAGGAGGATATTCTGGTGGGAGTGGAAGCGTGGCTTCAAGGTCTGTTAGTCCTGCTTGA

mRNA sequence

ATGTTTTATTGCGATTTGGCATCCGGTGCTCCAGAAACTTCTCTCACCTGGAGGCTATATATTATGCTTTCAGCTTGTTGCTTTGGGCGGTCGCAGATGTCGTACTCCAGAAGGTCTAGGTACTCCCGCTCTCCTTCATACAAACGATCGGTCTCAAGGTCCCTGTCAAGGTCAAGGAGCCGTTCAAGGAGCCCTTCTAGTGACGTTGAAAATCCTGGTAACAATTTGTACGTCACTGGTTTGTCACATAGAATTACAAGGAGAGAACTCGAGAAGCATTTTTCTGCTGAAGGAACAGTGCTAGATGTTCATCTCGTGACTGATCCATGGACTAGAGAATCCCGTGGTTTTGGATTCATTACCATGTCTAGTAATGATGAGGCTGAACGTTGCATCAAATATCTAAATCGATCTGTACTTGAAGGTCGATTAATCACTGTGGAGAAGGCTCGAAGACGGAGAGGTAGAACTCCGACTCCAGGGAGATATTTTGGACTTAGAACAGTCCGTGTGAGACGTAGATCGCGCAGCTACTCTTCTCGGCGTTCTCCCAGCTACTCTCCTTATAGCAGGAGCTTGAGCTGTTCGTCTAATTATTCATCTGACCGTAGCAGGAGCAGATCCCATTCTCCCAATCGACGCCGAAGATCAAATGACTCGCCATACCACTATAGATCATACTCCCCTTATAGCGGCCGAAGATATGATTCTCCATACTATAGGCGTCATAGGTCGTATTCTCGATCGCACTCTCCATGTAGTAGGTTGCCTACCAGGAGACACGACAGGTCGTACTCACCTTACGACTATTGCTCCCCTGATCCATACTACAGAAGGCACAGGGATCGGTCAGTTTCTAGGAGTGTCTCACCAAAGGCAAGGGTTTCTAGTAGACGTTATTCCCGCAGTTATTCTCCTAGGCACCGTAGAAGTGCCTCGAGGAGTTACTCCCGTAGCAGAAGTTATTCACGCAGTCTTTCCCCTGAACGAAGCAGGAGATTCAGGAGCCATTCACACAGTATCTCTCCTGAACGAAGGAGCTCGAGGAGTCGCTCTCGCAGCCATACTCCAAGGCACCATAAGAGAGGAGGATATTCTGGTGGGAGTGGAAGCGTGGCTTCAAGGTCTGTTAGTCCTGCTTGA

Coding sequence (CDS)

ATGTTTTATTGCGATTTGGCATCCGGTGCTCCAGAAACTTCTCTCACCTGGAGGCTATATATTATGCTTTCAGCTTGTTGCTTTGGGCGGTCGCAGATGTCGTACTCCAGAAGGTCTAGGTACTCCCGCTCTCCTTCATACAAACGATCGGTCTCAAGGTCCCTGTCAAGGTCAAGGAGCCGTTCAAGGAGCCCTTCTAGTGACGTTGAAAATCCTGGTAACAATTTGTACGTCACTGGTTTGTCACATAGAATTACAAGGAGAGAACTCGAGAAGCATTTTTCTGCTGAAGGAACAGTGCTAGATGTTCATCTCGTGACTGATCCATGGACTAGAGAATCCCGTGGTTTTGGATTCATTACCATGTCTAGTAATGATGAGGCTGAACGTTGCATCAAATATCTAAATCGATCTGTACTTGAAGGTCGATTAATCACTGTGGAGAAGGCTCGAAGACGGAGAGGTAGAACTCCGACTCCAGGGAGATATTTTGGACTTAGAACAGTCCGTGTGAGACGTAGATCGCGCAGCTACTCTTCTCGGCGTTCTCCCAGCTACTCTCCTTATAGCAGGAGCTTGAGCTGTTCGTCTAATTATTCATCTGACCGTAGCAGGAGCAGATCCCATTCTCCCAATCGACGCCGAAGATCAAATGACTCGCCATACCACTATAGATCATACTCCCCTTATAGCGGCCGAAGATATGATTCTCCATACTATAGGCGTCATAGGTCGTATTCTCGATCGCACTCTCCATGTAGTAGGTTGCCTACCAGGAGACACGACAGGTCGTACTCACCTTACGACTATTGCTCCCCTGATCCATACTACAGAAGGCACAGGGATCGGTCAGTTTCTAGGAGTGTCTCACCAAAGGCAAGGGTTTCTAGTAGACGTTATTCCCGCAGTTATTCTCCTAGGCACCGTAGAAGTGCCTCGAGGAGTTACTCCCGTAGCAGAAGTTATTCACGCAGTCTTTCCCCTGAACGAAGCAGGAGATTCAGGAGCCATTCACACAGTATCTCTCCTGAACGAAGGAGCTCGAGGAGTCGCTCTCGCAGCCATACTCCAAGGCACCATAAGAGAGGAGGATATTCTGGTGGGAGTGGAAGCGTGGCTTCAAGGTCTGTTAGTCCTGCTTGA

Protein sequence

MFYCDLASGAPETSLTWRLYIMLSACCFGRSQMSYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEKHFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARRRRGRTPTPGRYFGLRTVRVRRRSRSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPNRRRRSNDSPYHYRSYSPYSGRRYDSPYYRRHRSYSRSHSPCSRLPTRRHDRSYSPYDYCSPDPYYRRHRDRSVSRSVSPKARVSSRRYSRSYSPRHRRSASRSYSRSRSYSRSLSPERSRRFRSHSHSISPERRSSRSRSRSHTPRHHKRGGYSGGSGSVASRSVSPA

Homology

[Close]

BLAST of Csor.00g098980 vs. ExPASy Swiss-Prot
Match: Q84TH4 (Serine/arginine-rich splicing factor SR45a OS=Arabidopsis thaliana OX=3702 GN=SR45A PE=1 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.7e-61
Identity = 203/368 (55.16%), Postives = 229/368 (62.23%), Query Frame = 0


Query: 30  RSQMSYSRRSRYSRSPS-YKRSVSRSLSRSRSRS--RSPSSDVENPGNNLYVTGLSHRIT 89
           RS MSYSRRSRYS S S Y +   RS+SRS SRS  RS SSD ENPGN+LYVTGLSHR+T
Sbjct: 28  RSPMSYSRRSRYSPSLSPYDKRRGRSVSRSLSRSPTRSVSSDAENPGNSLYVTGLSHRVT 87

Query: 90  RRELEKHFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLIT 149
            R+LE HF+ EG V DVHLV DPWTRESRGFGFI+M S  +A RCI+ L+ SVL+GR+IT
Sbjct: 88  ERDLEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDANRCIRSLDHSVLQGRVIT 147

Query: 150 VEKARRRRGRTPTPGRYFGLRTVRVRRRSRSYSSRRSPSYSPYSRSLSCSSNYSSDRSRS 209
           VEKARRRRGRTPTPG+Y GLRT R R +S SYS RRS      S S S S +YSSDR RS
Sbjct: 148 VEKARRRRGRTPTPGKYLGLRTARGRHKSPSYSPRRS-----VSCSRSRSRSYSSDRGRS 207

Query: 210 RSHSPNRRRRSNDSPYHYRSYSPYSGRRYDSPYYRRHRSYSRSHSPCSRLPTRRHDRSYS 269
            S S  RR RS+     YR    YS  R  SP  R +R   RS+SP      RR DRS S
Sbjct: 208 YSPSYGRRGRSSSYSPFYRRRRFYSPSRSPSPDDRYNRRRDRSYSPY----YRRRDRSRS 267

Query: 270 PYDYC---SPDPYYRRHRDRSVSRSVSPKARVSSRRYS-------RSYSPRHRRSASRSY 329
               C      PYY R R RS SRS SP+ R   R  S       RSYSP H +   RSY
Sbjct: 268 YSRNCRARDRSPYYMR-RYRSRSRSYSPRYRARDRSCSPYYRGRDRSYSP-HYQGRDRSY 327

Query: 330 S-RSRSY--SRSLSPERSRRFRSHSHSISPERRSSRSRSRSHTPRHHKRGG--YSGGSGS 380
           S  SR Y   RS+S   S   RS S SISP  R  R  SRS + RH ++    +S  + S
Sbjct: 328 SPESRYYRRHRSVSGSVSPGGRSMSRSISP--RKGRKESRSKSRRHDRQSSMCHSRSARS 382

[Close]

BLAST of Csor.00g098980 vs. ExPASy Swiss-Prot
Match: Q10422 (Uncharacterized RNA-binding protein C25G10.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC25G10.01 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.7e-13
Identity = 74/215 (34.42%), Postives = 117/215 (54.42%), Query Frame = 0


Query: 52  SRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEKHFSAEGTVLDVHLVTDPWT 111
           + S +  +   +S     EN GN+L+V+G++ R+   EL++ FS  GTV  V ++ +P T
Sbjct: 79  NESTALDKKEPQSAPEGSENLGNDLFVSGIASRMQEDELQQIFSKFGTVTHVRIMREPVT 138

Query: 112 RESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARRRRGRTPTPGRYFGLRTVRV 171
           + SRGFGF++ S+ +EA   I  LN     GR++ V+KA+R R  +PTPG+Y G      
Sbjct: 139 KASRGFGFLSFSTVEEATSAIDNLNSQEFYGRVLNVQKAKRSRPHSPTPGKYMGYDR--- 198

Query: 172 RRRSRSYSSRRSPSYSPYSRSLSCSSNY-SSDRSRSR-SHSPNRRRRSNDSPYHYRS--Y 231
           RR SR + S        Y R     +NY   D +R R S+ P+R +R + SP +YR   Y
Sbjct: 199 RRNSRDFPSNNKD--GGYRR-----NNYRDRDSNRYRNSYRPSRPQREH-SPGNYRKERY 258

Query: 232 SPYSGRRYDSPYYRRHRSYSRSHSPCSRLPTRRHD 263
           +  S  R +  ++ R  +++  HS    +P  R+D
Sbjct: 259 NVDSRPRRERHFHGRSFAHAEHHS----VPNMRND 278

[Close]

BLAST of Csor.00g098980 vs. ExPASy Swiss-Prot
Match: Q06A98 (Serine/arginine-rich splicing factor 2 OS=Sus scrofa OX=9823 GN=SRSF2 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 7.3e-12
Identity = 80/218 (36.70%), Postives = 105/218 (48.17%), Query Frame = 0


Query: 65  PSSDVENPGNNLYVTGLSHRITRRELEKHFSAEGTVLDVHLVTDPWTRESRGFGFITMSS 124
           P  DVE    +L V  L++R +   L + F   G V DV++  D +T+ESRGF F+    
Sbjct: 6   PPPDVEGM-TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHD 65

Query: 125 NDEAERCIKYLNRSVLEGRLITVEKARRRR-------GRTPTPGRYFG------LRTVRV 184
             +AE  +  ++ +VL+GR + V+ AR  R        R P P RY G       R+ R 
Sbjct: 66  KRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGPPPRRYGGGGYGRRSRSPRR 125

Query: 185 RR--RSRSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPNRRRRSNDSPYHYRSYSP 244
           RR  RSRS S  RS S S YSRS S S   S  RS S+S S  R +  + S    RS S 
Sbjct: 126 RRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRS- 185

Query: 245 YSGRRYDSPYYRRHRSYSRSHSPCSRLPTRRHDRSYSP 268
                       R RS SRS  P S+  ++   RS SP
Sbjct: 186 ------------RSRSRSRSPPPASKRESKSRSRSKSP 209

[Close]

BLAST of Csor.00g098980 vs. ExPASy Swiss-Prot
Match: Q3MHR5 (Serine/arginine-rich splicing factor 2 OS=Bos taurus OX=9913 GN=SRSF2 PE=2 SV=3)

HSP 1 Score: 72.8 bits (177), Expect = 9.5e-12
Identity = 80/218 (36.70%), Postives = 105/218 (48.17%), Query Frame = 0


Query: 65  PSSDVENPGNNLYVTGLSHRITRRELEKHFSAEGTVLDVHLVTDPWTRESRGFGFITMSS 124
           P  DVE    +L V  L++R +   L + F   G V DV++  D +T+ESRGF F+    
Sbjct: 6   PPPDVEGM-TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHD 65

Query: 125 NDEAERCIKYLNRSVLEGRLITVEKARRRR-------GRTPTPGRYFG------LRTVRV 184
             +AE  +  ++ +VL+GR + V+ AR  R        R P P RY G       R+ R 
Sbjct: 66  KRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGPPPRRYGGGGYGRRSRSPRR 125

Query: 185 RR--RSRSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPNRRRRSNDSPYHYRSYSP 244
           RR  RSRS S  RS S S YSRS S S   S  RS S+S S  R +  + S    RS S 
Sbjct: 126 RRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRS- 185

Query: 245 YSGRRYDSPYYRRHRSYSRSHSPCSRLPTRRHDRSYSP 268
                       R RS SRS  P S+  ++   RS SP
Sbjct: 186 ------------RSRSRSRSPPPVSKRESKSRSRSKSP 209

[Close]

BLAST of Csor.00g098980 vs. ExPASy Swiss-Prot
Match: Q01130 (Serine/arginine-rich splicing factor 2 OS=Homo sapiens OX=9606 GN=SRSF2 PE=1 SV=4)

HSP 1 Score: 72.8 bits (177), Expect = 9.5e-12
Identity = 80/218 (36.70%), Postives = 105/218 (48.17%), Query Frame = 0


Query: 65  PSSDVENPGNNLYVTGLSHRITRRELEKHFSAEGTVLDVHLVTDPWTRESRGFGFITMSS 124
           P  DVE    +L V  L++R +   L + F   G V DV++  D +T+ESRGF F+    
Sbjct: 6   PPPDVEGM-TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHD 65

Query: 125 NDEAERCIKYLNRSVLEGRLITVEKARRRR-------GRTPTPGRYFG------LRTVRV 184
             +AE  +  ++ +VL+GR + V+ AR  R        R P P RY G       R+ R 
Sbjct: 66  KRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGPPPRRYGGGGYGRRSRSPRR 125

Query: 185 RR--RSRSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPNRRRRSNDSPYHYRSYSP 244
           RR  RSRS S  RS S S YSRS S S   S  RS S+S S  R +  + S    RS S 
Sbjct: 126 RRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRS- 185

Query: 245 YSGRRYDSPYYRRHRSYSRSHSPCSRLPTRRHDRSYSP 268
                       R RS SRS  P S+  ++   RS SP
Sbjct: 186 ------------RSRSRSRSPPPVSKRESKSRSRSKSP 209

[Close]

BLAST of Csor.00g098980 vs. NCBI nr
Match: KAG6607292.1 (Serine/arginine-rich splicing factor SR45a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 712 bits (1837), Expect = 6.83e-258
Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0


Query: 1   MFYCDLASGAPETSLTWRLYIMLSACCFGRSQMSYSRRSRYSRSPSYKRSVSRSLSRSRS 60
           MFYCDLASGAPETSLTWRLYIMLSACCFGRSQMSYSRRSRYSRSPSYKRSVSRSLSRSRS
Sbjct: 1   MFYCDLASGAPETSLTWRLYIMLSACCFGRSQMSYSRRSRYSRSPSYKRSVSRSLSRSRS 60

Query: 61  RSRSPSSDVENPGNNLYVTGLSHRITRRELEKHFSAEGTVLDVHLVTDPWTRESRGFGFI 120
           RSRSPSSDVENPGNNLYVTGLSHRITRRELEKHFSAEGTVLDVHLVTDPWTRESRGFGFI
Sbjct: 61  RSRSPSSDVENPGNNLYVTGLSHRITRRELEKHFSAEGTVLDVHLVTDPWTRESRGFGFI 120

Query: 121 TMSSNDEAERCIKYLNRSVLEGRLITVEKARRRRGRTPTPGRYFGLRTVRVRRRSRSYSS 180
           TMSSNDEAERCIKYLNRSVLEGRLITVEKARRRRGRTPTPGRYFGLRTVRVRRRSRSYSS
Sbjct: 121 TMSSNDEAERCIKYLNRSVLEGRLITVEKARRRRGRTPTPGRYFGLRTVRVRRRSRSYSS 180

Query: 181 RRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPNRRRRSNDSPYHYRSYSPYSGRRYDSPYY 240
           RRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPNRRRRSNDSPYHYRSYSPYSGRRYDSPYY
Sbjct: 181 RRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPNRRRRSNDSPYHYRSYSPYSGRRYDSPYY 240

Query: 241 RRHRSYSRSHSPCSRLPTRRHDRSYSPYDYCSPDPYYRRHRDRSVSRSVSPKARVSSRRY 300
           RRHRSYSRSHSPCSRLPTRRHDRSYSPYDYCSPDPYYRRHRDRSVSRSVSPKARVSSRRY
Sbjct: 241 RRHRSYSRSHSPCSRLPTRRHDRSYSPYDYCSPDPYYRRHRDRSVSRSVSPKARVSSRRY 300

Query: 301 SRSYSPRHRRSASRSYSRSRSYSRSLSPERSRRFRSHSHSISPERRSSRSRSRSHTPRHH 360
           SRSYSPRHRRSASRSYSRSRSYSRSLSPERSRRFRSHSHSISPERRSSRSRSRSHTPRHH
Sbjct: 301 SRSYSPRHRRSASRSYSRSRSYSRSLSPERSRRFRSHSHSISPERRSSRSRSRSHTPRHH 360

Query: 361 KRGGYSGGSGSVASRSVSPA 380
           KRGGYSGGSGSVASRSVSPA
Sbjct: 361 KRGGYSGGSGSVASRSVSPA 380

[Close]

BLAST of Csor.00g098980 vs. NCBI nr
Match: XP_022948992.1 (serine/arginine-rich splicing factor SR45a-like isoform X4 [Cucurbita moschata])

HSP 1 Score: 622 bits (1605), Expect = 4.61e-223
Identity = 341/348 (97.99%), Postives = 342/348 (98.28%), Query Frame = 0


Query: 33  MSYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEK 92
           MSYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEK
Sbjct: 1   MSYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEK 60

Query: 93  HFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARR 152
           HFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARR
Sbjct: 61  HFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARR 120

Query: 153 RRGRTPTPGRYFGLRTVRVRRRSRSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPN 212
           RRGRTPTPGRYFGLRTV VRRR RSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPN
Sbjct: 121 RRGRTPTPGRYFGLRTVCVRRRLRSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPN 180

Query: 213 RRRRSNDSPYHYRSYSPYSGRRYDSPYYRRHRSYSRSHSPCSRLPTRRHDRSYSPYDYCS 272
           RRRRSNDSPY YRSYSPYS RRYDSPYYRRHRSYSRSHSPCSRLPTRRHDRSYSPYDYCS
Sbjct: 181 RRRRSNDSPYRYRSYSPYSRRRYDSPYYRRHRSYSRSHSPCSRLPTRRHDRSYSPYDYCS 240

Query: 273 PDPYYRRHRDRSVSRSVSPKARVSSRRYSRSYSPRHRRSASRSYSRSRSYSRSLSPERSR 332
           PD YYRRHRDRSVSRSVSPKARVSSRRYS SYSPRHRRSASRS+SRSRSYSRSLSPERSR
Sbjct: 241 PDLYYRRHRDRSVSRSVSPKARVSSRRYSCSYSPRHRRSASRSHSRSRSYSRSLSPERSR 300

Query: 333 RFRSHSHSISPERRSSRSRSRSHTPRHHKRGGYSGGSGSVASRSVSPA 380
           RFRSHSHSISPERRSSRSRSRSHTPRHHKRGGYSGGSGSVASRSVSPA
Sbjct: 301 RFRSHSHSISPERRSSRSRSRSHTPRHHKRGGYSGGSGSVASRSVSPA 348

[Close]

BLAST of Csor.00g098980 vs. NCBI nr
Match: XP_022948994.1 (serine/arginine-rich splicing factor SR45a-like isoform X5 [Cucurbita moschata])

HSP 1 Score: 617 bits (1591), Expect = 6.25e-221
Identity = 339/348 (97.41%), Postives = 340/348 (97.70%), Query Frame = 0


Query: 33  MSYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEK 92
           MSYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEK
Sbjct: 1   MSYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEK 60

Query: 93  HFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARR 152
           HFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARR
Sbjct: 61  HFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARR 120

Query: 153 RRGRTPTPGRYFGLRTVRVRRRSRSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPN 212
           RRGRTPTPGRYFGLRTV VRRR RSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPN
Sbjct: 121 RRGRTPTPGRYFGLRTVCVRRRLRSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPN 180

Query: 213 RRRRSNDSPYHYRSYSPYSGRRYDSPYYRRHRSYSRSHSPCSRLPTRRHDRSYSPYDYCS 272
           RRRRSNDSPY YRSYSPYS RRYDSPYYRRHRSYSRSHSPCSR PTRR DRSYSPYDYCS
Sbjct: 181 RRRRSNDSPYRYRSYSPYSRRRYDSPYYRRHRSYSRSHSPCSRSPTRRRDRSYSPYDYCS 240

Query: 273 PDPYYRRHRDRSVSRSVSPKARVSSRRYSRSYSPRHRRSASRSYSRSRSYSRSLSPERSR 332
           PD YYRRHRDRSVSRSVSPKARVSSRRYS SYSPRHRRSASRS+SRSRSYSRSLSPERSR
Sbjct: 241 PDLYYRRHRDRSVSRSVSPKARVSSRRYSCSYSPRHRRSASRSHSRSRSYSRSLSPERSR 300

Query: 333 RFRSHSHSISPERRSSRSRSRSHTPRHHKRGGYSGGSGSVASRSVSPA 380
           RFRSHSHSISPERRSSRSRSRSHTPRHHKRGGYSGGSGSVASRSVSPA
Sbjct: 301 RFRSHSHSISPERRSSRSRSRSHTPRHHKRGGYSGGSGSVASRSVSPA 348

[Close]

BLAST of Csor.00g098980 vs. NCBI nr
Match: XP_022948991.1 (serine/arginine-rich splicing factor SR45a-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 611 bits (1575), Expect = 3.45e-218
Identity = 341/367 (92.92%), Postives = 342/367 (93.19%), Query Frame = 0


Query: 33  MSYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEK 92
           MSYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEK
Sbjct: 1   MSYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEK 60

Query: 93  HFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARR 152
           HFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARR
Sbjct: 61  HFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARR 120

Query: 153 RRGRTPTPGRYFGLRTVRVRRRSRSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPN 212
           RRGRTPTPGRYFGLRTV VRRR RSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPN
Sbjct: 121 RRGRTPTPGRYFGLRTVCVRRRLRSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPN 180

Query: 213 RRRRSNDSPYHYRSYSPYSGRRYDSPYYRRHRSYSRSHSPCSR----------------- 272
           RRRRSNDSPY YRSYSPYS RRYDSPYYRRHRSYSRSHSPCSR                 
Sbjct: 181 RRRRSNDSPYRYRSYSPYSRRRYDSPYYRRHRSYSRSHSPCSRSPTRRRDRSYSRSHSPC 240

Query: 273 --LPTRRHDRSYSPYDYCSPDPYYRRHRDRSVSRSVSPKARVSSRRYSRSYSPRHRRSAS 332
             LPTRRHDRSYSPYDYCSPD YYRRHRDRSVSRSVSPKARVSSRRYS SYSPRHRRSAS
Sbjct: 241 SRLPTRRHDRSYSPYDYCSPDLYYRRHRDRSVSRSVSPKARVSSRRYSCSYSPRHRRSAS 300

Query: 333 RSYSRSRSYSRSLSPERSRRFRSHSHSISPERRSSRSRSRSHTPRHHKRGGYSGGSGSVA 380
           RS+SRSRSYSRSLSPERSRRFRSHSHSISPERRSSRSRSRSHTPRHHKRGGYSGGSGSVA
Sbjct: 301 RSHSRSRSYSRSLSPERSRRFRSHSHSISPERRSSRSRSRSHTPRHHKRGGYSGGSGSVA 360

[Close]

BLAST of Csor.00g098980 vs. NCBI nr
Match: XP_022948990.1 (serine/arginine-rich splicing factor SR45a-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 605 bits (1561), Expect = 4.68e-216
Identity = 339/367 (92.37%), Postives = 340/367 (92.64%), Query Frame = 0


Query: 33  MSYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEK 92
           MSYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEK
Sbjct: 1   MSYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEK 60

Query: 93  HFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARR 152
           HFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARR
Sbjct: 61  HFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARR 120

Query: 153 RRGRTPTPGRYFGLRTVRVRRRSRSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPN 212
           RRGRTPTPGRYFGLRTV VRRR RSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPN
Sbjct: 121 RRGRTPTPGRYFGLRTVCVRRRLRSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPN 180

Query: 213 RRRRSNDSPYHYRSYSPYSGRRYDSPYYRRHRSYSRSHSPCSRLPTRRHDRSYS------ 272
           RRRRSNDSPY YRSYSPYS RRYDSPYYRRHRSYSRSHSPCSR PTRR DRSYS      
Sbjct: 181 RRRRSNDSPYRYRSYSPYSRRRYDSPYYRRHRSYSRSHSPCSRSPTRRRDRSYSRSHSPC 240

Query: 273 -------------PYDYCSPDPYYRRHRDRSVSRSVSPKARVSSRRYSRSYSPRHRRSAS 332
                        PYDYCSPD YYRRHRDRSVSRSVSPKARVSSRRYS SYSPRHRRSAS
Sbjct: 241 SRSPTRRRDRSYSPYDYCSPDLYYRRHRDRSVSRSVSPKARVSSRRYSCSYSPRHRRSAS 300

Query: 333 RSYSRSRSYSRSLSPERSRRFRSHSHSISPERRSSRSRSRSHTPRHHKRGGYSGGSGSVA 380
           RS+SRSRSYSRSLSPERSRRFRSHSHSISPERRSSRSRSRSHTPRHHKRGGYSGGSGSVA
Sbjct: 301 RSHSRSRSYSRSLSPERSRRFRSHSHSISPERRSSRSRSRSHTPRHHKRGGYSGGSGSVA 360

[Close]

BLAST of Csor.00g098980 vs. ExPASy TrEMBL
Match: A0A6J1GAS3 (serine/arginine-rich splicing factor SR45a-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111452466 PE=4 SV=1)

HSP 1 Score: 622 bits (1605), Expect = 2.23e-223
Identity = 341/348 (97.99%), Postives = 342/348 (98.28%), Query Frame = 0


Query: 33  MSYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEK 92
           MSYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEK
Sbjct: 1   MSYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEK 60

Query: 93  HFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARR 152
           HFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARR
Sbjct: 61  HFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARR 120

Query: 153 RRGRTPTPGRYFGLRTVRVRRRSRSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPN 212
           RRGRTPTPGRYFGLRTV VRRR RSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPN
Sbjct: 121 RRGRTPTPGRYFGLRTVCVRRRLRSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPN 180

Query: 213 RRRRSNDSPYHYRSYSPYSGRRYDSPYYRRHRSYSRSHSPCSRLPTRRHDRSYSPYDYCS 272
           RRRRSNDSPY YRSYSPYS RRYDSPYYRRHRSYSRSHSPCSRLPTRRHDRSYSPYDYCS
Sbjct: 181 RRRRSNDSPYRYRSYSPYSRRRYDSPYYRRHRSYSRSHSPCSRLPTRRHDRSYSPYDYCS 240

Query: 273 PDPYYRRHRDRSVSRSVSPKARVSSRRYSRSYSPRHRRSASRSYSRSRSYSRSLSPERSR 332
           PD YYRRHRDRSVSRSVSPKARVSSRRYS SYSPRHRRSASRS+SRSRSYSRSLSPERSR
Sbjct: 241 PDLYYRRHRDRSVSRSVSPKARVSSRRYSCSYSPRHRRSASRSHSRSRSYSRSLSPERSR 300

Query: 333 RFRSHSHSISPERRSSRSRSRSHTPRHHKRGGYSGGSGSVASRSVSPA 380
           RFRSHSHSISPERRSSRSRSRSHTPRHHKRGGYSGGSGSVASRSVSPA
Sbjct: 301 RFRSHSHSISPERRSSRSRSRSHTPRHHKRGGYSGGSGSVASRSVSPA 348

[Close]

BLAST of Csor.00g098980 vs. ExPASy TrEMBL
Match: A0A6J1GBJ2 (serine/arginine-rich splicing factor SR45a-like isoform X5 OS=Cucurbita moschata OX=3662 GN=LOC111452466 PE=4 SV=1)

HSP 1 Score: 617 bits (1591), Expect = 3.03e-221
Identity = 339/348 (97.41%), Postives = 340/348 (97.70%), Query Frame = 0


Query: 33  MSYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEK 92
           MSYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEK
Sbjct: 1   MSYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEK 60

Query: 93  HFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARR 152
           HFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARR
Sbjct: 61  HFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARR 120

Query: 153 RRGRTPTPGRYFGLRTVRVRRRSRSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPN 212
           RRGRTPTPGRYFGLRTV VRRR RSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPN
Sbjct: 121 RRGRTPTPGRYFGLRTVCVRRRLRSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPN 180

Query: 213 RRRRSNDSPYHYRSYSPYSGRRYDSPYYRRHRSYSRSHSPCSRLPTRRHDRSYSPYDYCS 272
           RRRRSNDSPY YRSYSPYS RRYDSPYYRRHRSYSRSHSPCSR PTRR DRSYSPYDYCS
Sbjct: 181 RRRRSNDSPYRYRSYSPYSRRRYDSPYYRRHRSYSRSHSPCSRSPTRRRDRSYSPYDYCS 240

Query: 273 PDPYYRRHRDRSVSRSVSPKARVSSRRYSRSYSPRHRRSASRSYSRSRSYSRSLSPERSR 332
           PD YYRRHRDRSVSRSVSPKARVSSRRYS SYSPRHRRSASRS+SRSRSYSRSLSPERSR
Sbjct: 241 PDLYYRRHRDRSVSRSVSPKARVSSRRYSCSYSPRHRRSASRSHSRSRSYSRSLSPERSR 300

Query: 333 RFRSHSHSISPERRSSRSRSRSHTPRHHKRGGYSGGSGSVASRSVSPA 380
           RFRSHSHSISPERRSSRSRSRSHTPRHHKRGGYSGGSGSVASRSVSPA
Sbjct: 301 RFRSHSHSISPERRSSRSRSRSHTPRHHKRGGYSGGSGSVASRSVSPA 348

[Close]

BLAST of Csor.00g098980 vs. ExPASy TrEMBL
Match: A0A6J1GAR1 (serine/arginine-rich splicing factor SR45a-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111452466 PE=4 SV=1)

HSP 1 Score: 611 bits (1575), Expect = 1.67e-218
Identity = 341/367 (92.92%), Postives = 342/367 (93.19%), Query Frame = 0


Query: 33  MSYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEK 92
           MSYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEK
Sbjct: 1   MSYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEK 60

Query: 93  HFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARR 152
           HFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARR
Sbjct: 61  HFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARR 120

Query: 153 RRGRTPTPGRYFGLRTVRVRRRSRSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPN 212
           RRGRTPTPGRYFGLRTV VRRR RSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPN
Sbjct: 121 RRGRTPTPGRYFGLRTVCVRRRLRSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPN 180

Query: 213 RRRRSNDSPYHYRSYSPYSGRRYDSPYYRRHRSYSRSHSPCSR----------------- 272
           RRRRSNDSPY YRSYSPYS RRYDSPYYRRHRSYSRSHSPCSR                 
Sbjct: 181 RRRRSNDSPYRYRSYSPYSRRRYDSPYYRRHRSYSRSHSPCSRSPTRRRDRSYSRSHSPC 240

Query: 273 --LPTRRHDRSYSPYDYCSPDPYYRRHRDRSVSRSVSPKARVSSRRYSRSYSPRHRRSAS 332
             LPTRRHDRSYSPYDYCSPD YYRRHRDRSVSRSVSPKARVSSRRYS SYSPRHRRSAS
Sbjct: 241 SRLPTRRHDRSYSPYDYCSPDLYYRRHRDRSVSRSVSPKARVSSRRYSCSYSPRHRRSAS 300

Query: 333 RSYSRSRSYSRSLSPERSRRFRSHSHSISPERRSSRSRSRSHTPRHHKRGGYSGGSGSVA 380
           RS+SRSRSYSRSLSPERSRRFRSHSHSISPERRSSRSRSRSHTPRHHKRGGYSGGSGSVA
Sbjct: 301 RSHSRSRSYSRSLSPERSRRFRSHSHSISPERRSSRSRSRSHTPRHHKRGGYSGGSGSVA 360

[Close]

BLAST of Csor.00g098980 vs. ExPASy TrEMBL
Match: A0A6J1GBG9 (serine/arginine-rich splicing factor SR45a-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452466 PE=4 SV=1)

HSP 1 Score: 605 bits (1561), Expect = 2.27e-216
Identity = 339/367 (92.37%), Postives = 340/367 (92.64%), Query Frame = 0


Query: 33  MSYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEK 92
           MSYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEK
Sbjct: 1   MSYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEK 60

Query: 93  HFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARR 152
           HFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARR
Sbjct: 61  HFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARR 120

Query: 153 RRGRTPTPGRYFGLRTVRVRRRSRSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPN 212
           RRGRTPTPGRYFGLRTV VRRR RSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPN
Sbjct: 121 RRGRTPTPGRYFGLRTVCVRRRLRSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPN 180

Query: 213 RRRRSNDSPYHYRSYSPYSGRRYDSPYYRRHRSYSRSHSPCSRLPTRRHDRSYS------ 272
           RRRRSNDSPY YRSYSPYS RRYDSPYYRRHRSYSRSHSPCSR PTRR DRSYS      
Sbjct: 181 RRRRSNDSPYRYRSYSPYSRRRYDSPYYRRHRSYSRSHSPCSRSPTRRRDRSYSRSHSPC 240

Query: 273 -------------PYDYCSPDPYYRRHRDRSVSRSVSPKARVSSRRYSRSYSPRHRRSAS 332
                        PYDYCSPD YYRRHRDRSVSRSVSPKARVSSRRYS SYSPRHRRSAS
Sbjct: 241 SRSPTRRRDRSYSPYDYCSPDLYYRRHRDRSVSRSVSPKARVSSRRYSCSYSPRHRRSAS 300

Query: 333 RSYSRSRSYSRSLSPERSRRFRSHSHSISPERRSSRSRSRSHTPRHHKRGGYSGGSGSVA 380
           RS+SRSRSYSRSLSPERSRRFRSHSHSISPERRSSRSRSRSHTPRHHKRGGYSGGSGSVA
Sbjct: 301 RSHSRSRSYSRSLSPERSRRFRSHSHSISPERRSSRSRSRSHTPRHHKRGGYSGGSGSVA 360

[Close]

BLAST of Csor.00g098980 vs. ExPASy TrEMBL
Match: A0A6J1GAU6 (serine/arginine-rich splicing factor SR45a-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452466 PE=4 SV=1)

HSP 1 Score: 603 bits (1556), Expect = 2.63e-215
Identity = 341/386 (88.34%), Postives = 342/386 (88.60%), Query Frame = 0


Query: 33  MSYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEK 92
           MSYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEK
Sbjct: 1   MSYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEK 60

Query: 93  HFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARR 152
           HFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARR
Sbjct: 61  HFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARR 120

Query: 153 RRGRTPTPGRYFGLRTVRVRRRSRSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPN 212
           RRGRTPTPGRYFGLRTV VRRR RSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPN
Sbjct: 121 RRGRTPTPGRYFGLRTVCVRRRLRSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPN 180

Query: 213 RRRRSNDSPYHYRSYSPYSGRRYDSPYYRRHRSYSRSHSPCSR----------------- 272
           RRRRSNDSPY YRSYSPYS RRYDSPYYRRHRSYSRSHSPCSR                 
Sbjct: 181 RRRRSNDSPYRYRSYSPYSRRRYDSPYYRRHRSYSRSHSPCSRSPTRRRDRSYSRSHSPC 240

Query: 273 ---------------------LPTRRHDRSYSPYDYCSPDPYYRRHRDRSVSRSVSPKAR 332
                                LPTRRHDRSYSPYDYCSPD YYRRHRDRSVSRSVSPKAR
Sbjct: 241 SRSPTRRRDRSYSRSHSPCSRLPTRRHDRSYSPYDYCSPDLYYRRHRDRSVSRSVSPKAR 300

Query: 333 VSSRRYSRSYSPRHRRSASRSYSRSRSYSRSLSPERSRRFRSHSHSISPERRSSRSRSRS 380
           VSSRRYS SYSPRHRRSASRS+SRSRSYSRSLSPERSRRFRSHSHSISPERRSSRSRSRS
Sbjct: 301 VSSRRYSCSYSPRHRRSASRSHSRSRSYSRSLSPERSRRFRSHSHSISPERRSSRSRSRS 360

[Close]

BLAST of Csor.00g098980 vs. TAIR 10
Match: AT1G07350.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 238.0 bits (606), Expect = 1.2e-62
Identity = 203/368 (55.16%), Postives = 229/368 (62.23%), Query Frame = 0


Query: 30  RSQMSYSRRSRYSRSPS-YKRSVSRSLSRSRSRS--RSPSSDVENPGNNLYVTGLSHRIT 89
           RS MSYSRRSRYS S S Y +   RS+SRS SRS  RS SSD ENPGN+LYVTGLSHR+T
Sbjct: 28  RSPMSYSRRSRYSPSLSPYDKRRGRSVSRSLSRSPTRSVSSDAENPGNSLYVTGLSHRVT 87

Query: 90  RRELEKHFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLIT 149
            R+LE HF+ EG V DVHLV DPWTRESRGFGFI+M S  +A RCI+ L+ SVL+GR+IT
Sbjct: 88  ERDLEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDANRCIRSLDHSVLQGRVIT 147

Query: 150 VEKARRRRGRTPTPGRYFGLRTVRVRRRSRSYSSRRSPSYSPYSRSLSCSSNYSSDRSRS 209
           VEKARRRRGRTPTPG+Y GLRT R R +S SYS RRS      S S S S +YSSDR RS
Sbjct: 148 VEKARRRRGRTPTPGKYLGLRTARGRHKSPSYSPRRS-----VSCSRSRSRSYSSDRGRS 207

Query: 210 RSHSPNRRRRSNDSPYHYRSYSPYSGRRYDSPYYRRHRSYSRSHSPCSRLPTRRHDRSYS 269
            S S  RR RS+     YR    YS  R  SP  R +R   RS+SP      RR DRS S
Sbjct: 208 YSPSYGRRGRSSSYSPFYRRRRFYSPSRSPSPDDRYNRRRDRSYSPY----YRRRDRSRS 267

Query: 270 PYDYC---SPDPYYRRHRDRSVSRSVSPKARVSSRRYS-------RSYSPRHRRSASRSY 329
               C      PYY R R RS SRS SP+ R   R  S       RSYSP H +   RSY
Sbjct: 268 YSRNCRARDRSPYYMR-RYRSRSRSYSPRYRARDRSCSPYYRGRDRSYSP-HYQGRDRSY 327

Query: 330 S-RSRSY--SRSLSPERSRRFRSHSHSISPERRSSRSRSRSHTPRHHKRGG--YSGGSGS 380
           S  SR Y   RS+S   S   RS S SISP  R  R  SRS + RH ++    +S  + S
Sbjct: 328 SPESRYYRRHRSVSGSVSPGGRSMSRSISP--RKGRKESRSKSRRHDRQSSMCHSRSARS 382

[Close]

BLAST of Csor.00g098980 vs. TAIR 10
Match: AT1G07350.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 152.5 bits (384), Expect = 6.7e-37
Identity = 84/120 (70.00%), Postives = 96/120 (80.00%), Query Frame = 0


Query: 33  MSYSRRSRYSRSPS-YKRSVSRSLSRSRSRS--RSPSSDVENPGNNLYVTGLSHRITRRE 92
           MSYSRRSRYS S S Y +   RS+SRS SRS  RS SSD ENPGN+LYVTGLSHR+T R+
Sbjct: 1   MSYSRRSRYSPSLSPYDKRRGRSVSRSLSRSPTRSVSSDAENPGNSLYVTGLSHRVTERD 60

Query: 93  LEKHFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEK 150
           LE HF+ EG V DVHLV DPWTRESRGFGFI+M S  +A RCI+ L+ SVL+GR+ITVEK
Sbjct: 61  LEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDANRCIRSLDHSVLQGRVITVEK 120

[Close]

BLAST of Csor.00g098980 vs. TAIR 10
Match: AT4G35785.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 151.8 bits (382), Expect = 1.1e-36
Identity = 112/219 (51.14%), Postives = 131/219 (59.82%), Query Frame = 0


Query: 34  SYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEKH 93
           S SR    SRS S  R VS S SR RSRSRS  S+VENPG  LYVTGLS R+T ++LE H
Sbjct: 31  SRSRPRLRSRSRSLPRPVSPSRSRGRSRSRSRGSEVENPGTTLYVTGLSTRVTDKDLEAH 90

Query: 94  FSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARRR 153
           F+ EG V    LV +P TR SRGF F+TMSS  +AERCIKYLN+SVLEGR ITVE++RR+
Sbjct: 91  FAKEGKVASCFLVMEPRTRVSRGFAFVTMSSLKDAERCIKYLNQSVLEGRYITVERSRRK 150

Query: 154 RGRTPTPGRYFGLRTVRVRRRSRSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPNR 213
           R RTPTPG Y GL++ R   R    S  R      Y R      +Y   RS  R +SP  
Sbjct: 151 RPRTPTPGHYLGLKSSRDSDREGRSSRGRH-----YDR-----DDYRDRRSPRRDYSPRD 210

Query: 214 RRRSNDSPYHYRSYSPYSGRRYDSPYYRRHRSYSRSHSP 253
            RRS       RSYSP+ GR  +    RR     R + P
Sbjct: 211 ERRSRRD----RSYSPH-GRSPERRSERRSERSERRYEP 234

[Close]

BLAST of Csor.00g098980 vs. TAIR 10
Match: AT4G35785.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 147.1 bits (370), Expect = 2.8e-35
Identity = 112/220 (50.91%), Postives = 131/220 (59.55%), Query Frame = 0


Query: 34  SYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPS-SDVENPGNNLYVTGLSHRITRRELEK 93
           S SR    SRS S  R VS S SR RSRSRS   S+VENPG  LYVTGLS R+T ++LE 
Sbjct: 31  SRSRPRLRSRSRSLPRPVSPSRSRGRSRSRSRGRSEVENPGTTLYVTGLSTRVTDKDLEA 90

Query: 94  HFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARR 153
           HF+ EG V    LV +P TR SRGF F+TMSS  +AERCIKYLN+SVLEGR ITVE++RR
Sbjct: 91  HFAKEGKVASCFLVMEPRTRVSRGFAFVTMSSLKDAERCIKYLNQSVLEGRYITVERSRR 150

Query: 154 RRGRTPTPGRYFGLRTVRVRRRSRSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPN 213
           +R RTPTPG Y GL++ R   R    S  R      Y R      +Y   RS  R +SP 
Sbjct: 151 KRPRTPTPGHYLGLKSSRDSDREGRSSRGRH-----YDR-----DDYRDRRSPRRDYSPR 210

Query: 214 RRRRSNDSPYHYRSYSPYSGRRYDSPYYRRHRSYSRSHSP 253
             RRS       RSYSP+ GR  +    RR     R + P
Sbjct: 211 DERRSRRD----RSYSPH-GRSPERRSERRSERSERRYEP 235

[Close]

BLAST of Csor.00g098980 vs. TAIR 10
Match: AT4G35785.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 125.6 bits (314), Expect = 8.8e-29
Identity = 74/117 (63.25%), Postives = 84/117 (71.79%), Query Frame = 0


Query: 34  SYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPS-SDVENPGNNLYVTGLSHRITRRELEK 93
           S SR    SRS S  R VS S SR RSRSRS   S+VENPG  LYVTGLS R+T ++LE 
Sbjct: 31  SRSRPRLRSRSRSLPRPVSPSRSRGRSRSRSRGRSEVENPGTTLYVTGLSTRVTDKDLEA 90

Query: 94  HFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEK 150
           HF+ EG V    LV +P TR SRGF F+TMSS  +AERCIKYLN+SVLEGR ITVE+
Sbjct: 91  HFAKEGKVASCFLVMEPRTRVSRGFAFVTMSSLKDAERCIKYLNQSVLEGRYITVER 147

The following BLAST results are available for this feature:

BLAST of Csor.00g098980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84TH4	1.7e-61	55.16	Serine/arginine-rich splicing factor SR45a OS=Arabidopsis thaliana OX=3702 GN=SR...	[more]
Q10422	1.7e-13	34.42	Uncharacterized RNA-binding protein C25G10.01 OS=Schizosaccharomyces pombe (stra...	[more]
Q06A98	7.3e-12	36.70	Serine/arginine-rich splicing factor 2 OS=Sus scrofa OX=9823 GN=SRSF2 PE=2 SV=1	[more]
Q3MHR5	9.5e-12	36.70	Serine/arginine-rich splicing factor 2 OS=Bos taurus OX=9913 GN=SRSF2 PE=2 SV=3	[more]
Q01130	9.5e-12	36.70	Serine/arginine-rich splicing factor 2 OS=Homo sapiens OX=9606 GN=SRSF2 PE=1 SV=...	[more]

BLAST of Csor.00g098980 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607292.1	6.83e-258	100.00	Serine/arginine-rich splicing factor SR45a, partial [Cucurbita argyrosperma subs...	[more]
XP_022948992.1	4.61e-223	97.99	serine/arginine-rich splicing factor SR45a-like isoform X4 [Cucurbita moschata]	[more]
XP_022948994.1	6.25e-221	97.41	serine/arginine-rich splicing factor SR45a-like isoform X5 [Cucurbita moschata]	[more]
XP_022948991.1	3.45e-218	92.92	serine/arginine-rich splicing factor SR45a-like isoform X3 [Cucurbita moschata]	[more]
XP_022948990.1	4.68e-216	92.37	serine/arginine-rich splicing factor SR45a-like isoform X2 [Cucurbita moschata]	[more]

BLAST of Csor.00g098980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GAS3	2.23e-223	97.99	serine/arginine-rich splicing factor SR45a-like isoform X4 OS=Cucurbita moschata...	[more]
A0A6J1GBJ2	3.03e-221	97.41	serine/arginine-rich splicing factor SR45a-like isoform X5 OS=Cucurbita moschata...	[more]
A0A6J1GAR1	1.67e-218	92.92	serine/arginine-rich splicing factor SR45a-like isoform X3 OS=Cucurbita moschata...	[more]
A0A6J1GBG9	2.27e-216	92.37	serine/arginine-rich splicing factor SR45a-like isoform X2 OS=Cucurbita moschata...	[more]
A0A6J1GAU6	2.63e-215	88.34	serine/arginine-rich splicing factor SR45a-like isoform X1 OS=Cucurbita moschata...	[more]

BLAST of Csor.00g098980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07350.1	1.2e-62	55.16	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G07350.2	6.7e-37	70.00	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G35785.1	1.1e-36	51.14	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G35785.2	2.8e-35	50.91	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G35785.3	8.8e-29	63.25	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 75..148 e-value: 2.3E-20 score: 83.7
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 76..145 e-value: 9.0E-15 score: 54.3
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 74..152 score: 17.114126
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 29..158 e-value: 2.7E-27 score: 97.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 301..315
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..380
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 274..288
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 180..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 325..350
None	No IPR available	PANTHER	PTHR15241:SF351	SERINE/ARGININE-RICH SPLICING FACTOR SR45A-LIKE ISOFORM X1	coord: 40..291
None	No IPR available	PANTHER	PTHR15241	TRANSFORMER-2-RELATED	coord: 40..291
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 63..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g098980.m01	Csor.00g098980.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048026	positive regulation of mRNA splicing, via spliceosome
cellular_component	GO:0005681	spliceosomal complex
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding