Csor.00g098370 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g098370
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr14: 2593568 .. 2596880 (-)
RNA-Seq ExpressionCsor.00g098370
SyntenyCsor.00g098370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCTTCAACGCTGCTACACCCAGAGGTTGGTTCAATTCCTATGTTCATCTCCATATCTCTTCCCTGCCATATTCACAGGTAAATGGCAAGCAGGGAAGCGAGCGGCTTGTACTGATGAGATTGCCTCCACCGTCAACAACTAAGCTAAATCTTGTGCCCTTTGTTGCAGGTCTGTTTTTTTTTAGTCTATGAACTATGTTATTTTAAGAAAGGGATACAGTGGAAAGCAAATGTGAGATCCACGACAGTTGGAAAGGAGAACAAATCATTTTTTATAAGAGTGTGGAAACCTCTCCTTACCAAACACATTTTAAAAACCTCGAGGGAACGAATCATTCTTTATAAGGGTGTGGAAACCTCTCCTTAGCAGATGCGTTTTAAAAACTTTGAGAGGACAATATCTAGTAGCGGTAAGTTTTTCTATCAATTTATAACCAGTCCATCCATTTTTAGCTTCTTTGTTTTTGTACTTTTTAACTAATAGACATGGTGAAGAAGCAATCGAAGAAGTTGTTTAAAGAAGATACTTTTGTGCTTTAAAGATGGGTAGTGTTCTTCATGTGATTTTTGCTTTTGATTTTAAGAACATATTGTTAAAGAATCTATGATTTTTGTTTTTGAGATGAGACATTTTGGAAAACTAAAAATAAAATTACTAGAGTTTATACTTAAAGTGACCATATCATGTCAACACATATATTTCGATATATTATTCCTTATTTCTTTGATTGATGTTAATTATATGTAACACTTCAATCCAAAAAAATCAAAACTGACGGGAATAAGGAATAATATATCGAAATATATGGACAAAAATTTAACATTTATAGAATAATTACTATAAATTTTATTTTTTCTTTAAAAGAAAAAATCCCCGTAAAATAAGATAATCTGAAAAAGGAAATTGTGGTGAAATCGGCTTTAGCTACACGCTACGGGTAACATTTCTTCAACCATAAAGTTTGCAGCTTTATCTTTTACTCAGCCCAAGAACCTCTGCCTCTGTTCTCTAATGGCTTCCTCCAAATCTAATCCAACTCCTTCAATGGATATGCTCTGAAACTCCCAGTCCACGCCTCTACCTCGAATAACACACCGGAAAGGCCATGGCAATGACATGGCACATGGCGTTTTGGATCGCTAACATGGTTTGGGTAGCCTTGAGCGACTGTGTTTCTTCTTGTTTGGCCATCGCCGACGAGGTCGCGGGCTCCATCAGAACTGGTGATATTGGCCCTTTTCACATTGGCTGACCGGAGATTCTTCGATTTCGTCAATTCGTAACCCCTCTGGTTTGTATCCTAACTCGGAATTTTCTGATTGTTTTCCATTTTGGTGTTTTGTTTTCACTTCTGAAGTTTGAATGTTTGTTTCAAAAAGCTTGTTTGAATCGTCTGATTTCCCCATCTCGGATTTCTGCAAATTATGCTCTCCATGTGCTTGATTATAGGGTTCTAGAGTCCGTTCAATCATTTTTCTCTTTCTCAATCATGTGAAGTGTGATTAGGAATGCCATTACGCAACAATTGTTTGAGGGAGTCCTGTGTTTTTCAAGAAATTGAAGAGGTTGCAATTTGAGTAGCCATTCTTGTTTATTTCTTGCTTTCTTTTACAGAGAAATTATAGCTACCTAAAATGGGAACTGTATGAATTGGTTTGGCCTTCATTGATTCAACTAATATCATCAAGTTTGGAGATATATTCTGCTTCTAGTACCATTGGGTGTTTAACATTTGATCATTGTTCATTCAACATATTAACTATACGTCAATATCTGATATTTTGTACTGTCTTATGATCTATTCTTCAATGGGTCTCTGTAAGATATTCTTTCGTTTTCTGAAATACCAATTGTCTTTAATATATCAAATGACACTGGAAATTTGGCTATTAATTTCCTTTGTAAAACTAGAAAAAGATGGCTGATTCTGGGCTGTTTGTATCGATCTGTTGTGAAGTTTGTAGAGAAATATTATGGATATTATTAGGAATTGATGATGAGTATAGCTTATGTTAAGGATATTTAGCCTTTCATTACGGTTTACCATAGCTATCATATTTGATCTTTTATTATAGGCAAATATCTATATATTTAGCCTTCCATTACGGTTTACCGTAGCTATCATATTTGACCTTTTATTACAGGCAAATATCTATACATTTAGCCTTCCACCCGTAGCTACCATATTTGACATTTTATTACACGCAAATATCTAGATATTTAGCCTTCCATTACGGTTTACCATTGCTACCATATTTAACCTTTTATTATAGGCAAATATCTAAATATTTAGACTTTTATTATGGTTTACCATAGCTACCATATTTGACCTAGCAAATATCTTGTATCCATTTATTGCTCTTCCCAATTATTGTTTTTTCATTTCTTTTGTAATTTATTTGATGATTATAAATAAAGAGTTTTACTACCATTGAGGTGTGATAATTTTAGCAAATATTCGTAGCTTAAAGTAAGGTTTGAACGAGTATACTTCTAAAACAATGAGTGCAAGATAGGAGTAGTTGAGCACGCAAACCTAACAAGGTAAGTCAGAAGGTTCATCTTGGAATAGGTGCTTAGACAAATCTTGAGGCTGAAGACTTGCCTATAACTGAGGACTAATCACCTTAAGCTAGCTAGTGAATGGATGTCAAGCATCCCTTATAAACTAGATACACAGCAGGAATAGAGTTGACGAGCTAAAGCTTTCTAGAATGGCTTTTCCTGCTTTTTCGAGTCTAGATACCTACATTCTAGTATGGGTTTCCTTCGCCACCCTTCCTCGCTCAAGCCTTTAACCCTCTCTCTCTCTTTTTTTTCTTTTTGGATCTTGGTAGTTGAATGTCAAGCGTGCTAGCCGGGTTGAGCCTCTACTCGAAGACAACTATCCCTTTTCTTTGTATGTTTAACTACGACTCTTTGTCTACCCAATGGGGATACATACACAAACCCTCAGGCTCAACAGTTAGGTTCGACTCTTGTCTTATTGGACACCCAACGAAAGGCTGACATTCAACAACTACTTGCAAGTTTATATTTGTATAACTGCTCAAGATAATAGGCACTGTACGTTAATATCTATAAAAACCTAGCATGTAAATAAATAACAATGACAATGTCATGGTTTATTAATGCAGGAACAAACTGCTATAGTTGCACACTTCTGGTTATAAATCCCCAGATCCTACTCATATGATCAGCAATGAATTGTGGATAAAATTATATTTTACTGTTGCTTCCATTCTCAATAGGTGAAGAACGATAATACGTTCATATGCAGGTAAAAAAGAATGGCAGATCAGTATGTAG

mRNA sequence

ATGTTCTTCAACGCTGCTACACCCAGAGGTTGGTTCAATTCCTATGTTCATCTCCATATCTCTTCCCTGCCATATTCACAGGTAAATGGCAAGCAGGGAAGCGAGCGGCTTGTACTGATGAGATTGCCTCCACCGTCAACAACTAAGCTAAATCTTGTGCCCTTTGTTGCAGATTCTTCGATTTCGTCAATTCGTAACCCCTCTGGTAAAAAAGAATGGCAGATCAGTATGTAG

Coding sequence (CDS)

ATGTTCTTCAACGCTGCTACACCCAGAGGTTGGTTCAATTCCTATGTTCATCTCCATATCTCTTCCCTGCCATATTCACAGGTAAATGGCAAGCAGGGAAGCGAGCGGCTTGTACTGATGAGATTGCCTCCACCGTCAACAACTAAGCTAAATCTTGTGCCCTTTGTTGCAGATTCTTCGATTTCGTCAATTCGTAACCCCTCTGGTAAAAAAGAATGGCAGATCAGTATGTAG

Protein sequence

MFFNAATPRGWFNSYVHLHISSLPYSQVNGKQGSERLVLMRLPPPSTTKLNLVPFVADSSISSIRNPSGKKEWQISM
Homology
[Close]
BLAST of Csor.00g098370 vs. NCBI nr
Match: KAG6580893.1 (hypothetical protein SDJN03_20895, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 160 bits (404), Expect = 2.03e-49
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MFFNAATPRGWFNSYVHLHISSLPYSQVNGKQGSERLVLMRLPPPSTTKLNLVPFVADSS 60
          MFFNAATPRGWFNSYVHLHISSLPYSQVNGKQGSERLVLMRLPPPSTTKLNLVPFVADSS
Sbjct: 1  MFFNAATPRGWFNSYVHLHISSLPYSQVNGKQGSERLVLMRLPPPSTTKLNLVPFVADSS 60

Query: 61 ISSIRNPSGKKEWQISM 77
          ISSIRNPSGKKEWQISM
Sbjct: 61 ISSIRNPSGKKEWQISM 77

The following BLAST results are available for this feature:
BLAST of Csor.00g098370 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g098370 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6580893.12.03e-49100.00hypothetical protein SDJN03_20895, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g098370 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g098370 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g098370.m01Csor.00g098370.m01mRNA